Illumina Body Map 2 (GSE30611)
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
SIN3A | hg38_v1_chr15_-_75455802_75455842 | 0.29 | 1.1e-01 | Click! |
CHD1 | hg38_v1_chr5_-_98928992_98929020 | 0.14 | 4.6e-01 | Click! |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 18.3 | GO:0000209 | protein polyubiquitination(GO:0000209) |
0.0 | 16.7 | GO:0042119 | neutrophil activation(GO:0042119) |
0.3 | 14.6 | GO:0048268 | clathrin coat assembly(GO:0048268) |
0.4 | 11.1 | GO:0061158 | 3'-UTR-mediated mRNA destabilization(GO:0061158) |
0.1 | 9.3 | GO:0007062 | sister chromatid cohesion(GO:0007062) |
1.1 | 9.0 | GO:0090625 | mRNA cleavage involved in gene silencing by siRNA(GO:0090625) |
1.7 | 8.4 | GO:1905205 | positive regulation of connective tissue replacement(GO:1905205) |
0.5 | 8.0 | GO:0043374 | CD8-positive, alpha-beta T cell differentiation(GO:0043374) |
0.5 | 7.7 | GO:0021840 | directional guidance of interneurons involved in migration from the subpallium to the cortex(GO:0021840) chemorepulsion involved in interneuron migration from the subpallium to the cortex(GO:0021842) |
0.3 | 7.2 | GO:0014733 | regulation of skeletal muscle adaptation(GO:0014733) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 29.4 | GO:0016605 | PML body(GO:0016605) |
0.1 | 16.8 | GO:0017053 | transcriptional repressor complex(GO:0017053) |
0.2 | 16.6 | GO:0005876 | spindle microtubule(GO:0005876) |
0.1 | 16.3 | GO:0000790 | nuclear chromatin(GO:0000790) |
0.0 | 16.0 | GO:0005694 | chromosome(GO:0005694) |
0.0 | 14.5 | GO:0000151 | ubiquitin ligase complex(GO:0000151) |
0.2 | 14.3 | GO:0030673 | axolemma(GO:0030673) |
0.1 | 12.3 | GO:0005834 | heterotrimeric G-protein complex(GO:0005834) |
0.1 | 12.1 | GO:0070821 | tertiary granule membrane(GO:0070821) |
0.2 | 11.1 | GO:0071565 | nBAF complex(GO:0071565) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 25.5 | GO:0042393 | histone binding(GO:0042393) |
0.1 | 18.0 | GO:0061630 | ubiquitin protein ligase activity(GO:0061630) ubiquitin-like protein ligase activity(GO:0061659) |
0.1 | 15.0 | GO:0004722 | protein serine/threonine phosphatase activity(GO:0004722) |
0.0 | 14.0 | GO:0004842 | ubiquitin-protein transferase activity(GO:0004842) |
0.1 | 13.9 | GO:0034212 | peptide N-acetyltransferase activity(GO:0034212) |
1.0 | 12.9 | GO:0033192 | calmodulin-dependent protein phosphatase activity(GO:0033192) |
0.1 | 12.9 | GO:0070491 | repressing transcription factor binding(GO:0070491) |
0.3 | 12.3 | GO:0004683 | calmodulin-dependent protein kinase activity(GO:0004683) |
0.1 | 12.0 | GO:0003777 | microtubule motor activity(GO:0003777) |
0.1 | 11.9 | GO:0004843 | thiol-dependent ubiquitin-specific protease activity(GO:0004843) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.4 | 28.9 | PID CD8 TCR DOWNSTREAM PATHWAY | Downstream signaling in naïve CD8+ T cells |
0.3 | 26.7 | PID IFNG PATHWAY | IFN-gamma pathway |
0.1 | 23.3 | PID BETA CATENIN NUC PATHWAY | Regulation of nuclear beta catenin signaling and target gene transcription |
0.2 | 14.9 | PID CD8 TCR PATHWAY | TCR signaling in naïve CD8+ T cells |
0.2 | 14.6 | PID AURORA A PATHWAY | Aurora A signaling |
0.2 | 14.2 | PID HDAC CLASSII PATHWAY | Signaling events mediated by HDAC Class II |
0.2 | 12.9 | PID MAPK TRK PATHWAY | Trk receptor signaling mediated by the MAPK pathway |
0.2 | 12.3 | PID RETINOIC ACID PATHWAY | Retinoic acid receptors-mediated signaling |
0.4 | 10.6 | PID TCR RAS PATHWAY | Ras signaling in the CD4+ TCR pathway |
0.1 | 10.2 | PID ERBB4 PATHWAY | ErbB4 signaling events |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 26.1 | REACTOME ANTIGEN PROCESSING UBIQUITINATION PROTEASOME DEGRADATION | Genes involved in Antigen processing: Ubiquitination & Proteasome degradation |
0.1 | 22.8 | REACTOME TRANSMISSION ACROSS CHEMICAL SYNAPSES | Genes involved in Transmission across Chemical Synapses |
0.5 | 21.2 | REACTOME CIRCADIAN REPRESSION OF EXPRESSION BY REV ERBA | Genes involved in Circadian Repression of Expression by REV-ERBA |
0.2 | 19.6 | REACTOME NOTCH1 INTRACELLULAR DOMAIN REGULATES TRANSCRIPTION | Genes involved in NOTCH1 Intracellular Domain Regulates Transcription |
0.3 | 15.7 | REACTOME CA DEPENDENT EVENTS | Genes involved in Ca-dependent events |
0.2 | 14.5 | REACTOME VOLTAGE GATED POTASSIUM CHANNELS | Genes involved in Voltage gated Potassium channels |
0.1 | 14.0 | REACTOME ANTIVIRAL MECHANISM BY IFN STIMULATED GENES | Genes involved in Antiviral mechanism by IFN-stimulated genes |
0.1 | 12.7 | REACTOME MITOTIC PROMETAPHASE | Genes involved in Mitotic Prometaphase |
0.3 | 11.8 | REACTOME RAS ACTIVATION UOPN CA2 INFUX THROUGH NMDA RECEPTOR | Genes involved in Ras activation uopn Ca2+ infux through NMDA receptor |
0.2 | 9.0 | REACTOME PLATELET CALCIUM HOMEOSTASIS | Genes involved in Platelet calcium homeostasis |