Illumina Body Map 2 (GSE30611)
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
SMAD3 | hg38_v1_chr15_+_67067780_67067811 | -0.22 | 2.3e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr1_-_159714581 Show fit | 4.53 |
ENST00000255030.9
ENST00000437342.1 ENST00000368112.5 ENST00000368111.5 ENST00000368110.1 |
C-reactive protein |
|
chr11_+_116829898 Show fit | 2.46 |
ENST00000227667.8
ENST00000375345.3 |
apolipoprotein C3 |
|
chr11_+_116830529 Show fit | 2.36 |
ENST00000630701.1
|
apolipoprotein C3 |
|
chr7_+_142656688 Show fit | 2.24 |
ENST00000390397.2
|
T cell receptor beta variable 24-1 |
|
chr16_+_56669807 Show fit | 1.94 |
ENST00000332374.5
|
metallothionein 1H |
|
chr7_+_50308672 Show fit | 1.82 |
ENST00000439701.2
ENST00000438033.5 ENST00000492782.6 |
IKAROS family zinc finger 1 |
|
chr5_+_132873660 Show fit | 1.80 |
ENST00000296877.3
|
liver enriched antimicrobial peptide 2 |
|
chr10_+_92691813 Show fit | 1.79 |
ENST00000472590.6
|
hematopoietically expressed homeobox |
|
chr1_-_160862880 Show fit | 1.70 |
ENST00000368034.9
|
CD244 molecule |
|
chr1_-_160862700 Show fit | 1.67 |
ENST00000322302.7
ENST00000368033.7 |
CD244 molecule |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
1.2 | 4.8 | GO:0060621 | negative regulation of cholesterol import(GO:0060621) negative regulation of sterol import(GO:2000910) |
0.2 | 4.8 | GO:0032930 | positive regulation of superoxide anion generation(GO:0032930) |
1.1 | 3.4 | GO:0071613 | granzyme B production(GO:0071613) regulation of granzyme B production(GO:0071661) positive regulation of granzyme B production(GO:0071663) |
1.0 | 3.0 | GO:0061011 | hepatic duct development(GO:0061011) |
0.1 | 2.5 | GO:0002291 | T cell activation via T cell receptor contact with antigen bound to MHC molecule on antigen presenting cell(GO:0002291) |
0.2 | 2.3 | GO:0000972 | transcription-dependent tethering of RNA polymerase II gene DNA at nuclear periphery(GO:0000972) |
0.1 | 1.9 | GO:0071294 | cellular response to zinc ion(GO:0071294) |
0.0 | 1.8 | GO:0019730 | antimicrobial humoral response(GO:0019730) |
0.2 | 1.6 | GO:0060481 | lobar bronchus epithelium development(GO:0060481) |
0.2 | 1.6 | GO:1900226 | negative regulation of NLRP3 inflammasome complex assembly(GO:1900226) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.6 | 4.8 | GO:0034363 | intermediate-density lipoprotein particle(GO:0034363) |
0.1 | 2.7 | GO:0097431 | mitotic spindle pole(GO:0097431) |
0.2 | 2.5 | GO:0034687 | integrin alphaL-beta2 complex(GO:0034687) |
0.0 | 2.5 | GO:0032993 | protein-DNA complex(GO:0032993) |
0.0 | 1.9 | GO:0031093 | platelet alpha granule lumen(GO:0031093) |
0.1 | 1.8 | GO:0031618 | nuclear pericentric heterochromatin(GO:0031618) |
0.0 | 1.6 | GO:0005776 | autophagosome(GO:0005776) |
0.0 | 1.5 | GO:1990124 | messenger ribonucleoprotein complex(GO:1990124) |
0.0 | 1.3 | GO:0070822 | Sin3-type complex(GO:0070822) |
0.0 | 1.3 | GO:0005881 | cytoplasmic microtubule(GO:0005881) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
1.0 | 4.8 | GO:0070653 | high-density lipoprotein particle receptor binding(GO:0070653) |
1.1 | 4.5 | GO:0033265 | choline binding(GO:0033265) |
0.1 | 3.4 | GO:0042288 | MHC class I protein binding(GO:0042288) |
0.1 | 3.0 | GO:0008190 | eukaryotic initiation factor 4E binding(GO:0008190) |
0.0 | 2.9 | GO:0001078 | transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding(GO:0001078) |
0.2 | 2.5 | GO:0030369 | ICAM-3 receptor activity(GO:0030369) |
0.1 | 2.1 | GO:0008391 | arachidonic acid monooxygenase activity(GO:0008391) arachidonic acid epoxygenase activity(GO:0008392) |
0.3 | 1.6 | GO:0050436 | microfibril binding(GO:0050436) |
0.0 | 1.5 | GO:0035925 | mRNA 3'-UTR AU-rich region binding(GO:0035925) |
0.1 | 1.4 | GO:0005225 | volume-sensitive anion channel activity(GO:0005225) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 2.9 | PID IL6 7 PATHWAY | IL6-mediated signaling events |
0.0 | 2.5 | PID INTEGRIN CS PATHWAY | Integrin family cell surface interactions |
0.0 | 2.2 | PID NFAT TFPATHWAY | Calcineurin-regulated NFAT-dependent transcription in lymphocytes |
0.0 | 1.1 | PID CDC42 REG PATHWAY | Regulation of CDC42 activity |
0.0 | 0.9 | PID EPO PATHWAY | EPO signaling pathway |
0.0 | 0.6 | PID NFKAPPAB ATYPICAL PATHWAY | Atypical NF-kappaB pathway |
0.0 | 0.3 | PID RANBP2 PATHWAY | Sumoylation by RanBP2 regulates transcriptional repression |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 4.8 | REACTOME CHYLOMICRON MEDIATED LIPID TRANSPORT | Genes involved in Chylomicron-mediated lipid transport |
0.3 | 4.5 | REACTOME CREATION OF C4 AND C2 ACTIVATORS | Genes involved in Creation of C4 and C2 activators |
0.0 | 2.5 | REACTOME IMMUNOREGULATORY INTERACTIONS BETWEEN A LYMPHOID AND A NON LYMPHOID CELL | Genes involved in Immunoregulatory interactions between a Lymphoid and a non-Lymphoid cell |
0.0 | 2.3 | REACTOME REGULATION OF GLUCOKINASE BY GLUCOKINASE REGULATORY PROTEIN | Genes involved in Regulation of Glucokinase by Glucokinase Regulatory Protein |
0.0 | 2.2 | REACTOME RESPONSE TO ELEVATED PLATELET CYTOSOLIC CA2 | Genes involved in Response to elevated platelet cytosolic Ca2+ |
0.1 | 2.1 | REACTOME XENOBIOTICS | Genes involved in Xenobiotics |
0.1 | 1.6 | REACTOME THE NLRP3 INFLAMMASOME | Genes involved in The NLRP3 inflammasome |
0.0 | 1.2 | REACTOME CYTOCHROME P450 ARRANGED BY SUBSTRATE TYPE | Genes involved in Cytochrome P450 - arranged by substrate type |
0.1 | 1.0 | REACTOME HORMONE LIGAND BINDING RECEPTORS | Genes involved in Hormone ligand-binding receptors |
0.0 | 1.0 | REACTOME FACILITATIVE NA INDEPENDENT GLUCOSE TRANSPORTERS | Genes involved in Facilitative Na+-independent glucose transporters |