Illumina Body Map 2 (GSE30611)
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
SOX14 | hg38_v1_chr3_+_137764296_137764320 | -0.38 | 3.1e-02 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr11_+_62419025 Show fit | 2.70 |
ENST00000278282.3
|
secretoglobin family 1A member 1 |
|
chr2_-_37672178 Show fit | 2.56 |
ENST00000457889.1
|
CDC42 effector protein 3 |
|
chr12_+_8513499 Show fit | 2.23 |
ENST00000299665.3
|
C-type lectin domain family 4 member D |
|
chr11_-_102724945 Show fit | 2.07 |
ENST00000236826.8
|
matrix metallopeptidase 8 |
|
chr9_+_110090197 Show fit | 2.00 |
ENST00000480388.1
|
PALM2 and AKAP2 fusion |
|
chr2_-_37671633 Show fit | 1.97 |
ENST00000295324.4
|
CDC42 effector protein 3 |
|
chr6_-_159726871 Show fit | 1.86 |
ENST00000535561.5
|
superoxide dismutase 2 |
|
chr19_-_8343255 Show fit | 1.81 |
ENST00000330915.7
ENST00000593649.5 ENST00000595639.1 |
KN motif and ankyrin repeat domains 3 |
|
chr7_+_102285125 Show fit | 1.76 |
ENST00000536178.3
|
SH2B adaptor protein 2 |
|
chr22_+_19760714 Show fit | 1.75 |
ENST00000649276.2
|
T-box transcription factor 1 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 6.2 | GO:0030049 | muscle filament sliding(GO:0030049) actin-myosin filament sliding(GO:0033275) |
0.3 | 6.0 | GO:0031274 | positive regulation of pseudopodium assembly(GO:0031274) |
1.1 | 3.4 | GO:0009720 | detection of hormone stimulus(GO:0009720) |
0.0 | 3.3 | GO:0035987 | endodermal cell differentiation(GO:0035987) |
0.5 | 3.2 | GO:0072011 | glomerular endothelium development(GO:0072011) |
0.1 | 3.0 | GO:0035855 | megakaryocyte development(GO:0035855) |
0.0 | 2.8 | GO:0002181 | cytoplasmic translation(GO:0002181) |
0.5 | 2.7 | GO:0010193 | response to ozone(GO:0010193) |
0.1 | 2.7 | GO:0007175 | negative regulation of epidermal growth factor-activated receptor activity(GO:0007175) |
0.0 | 2.6 | GO:0090162 | establishment of epithelial cell polarity(GO:0090162) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.3 | 5.3 | GO:0005862 | muscle thin filament tropomyosin(GO:0005862) |
0.0 | 4.0 | GO:0005791 | rough endoplasmic reticulum(GO:0005791) |
0.0 | 3.3 | GO:1904724 | tertiary granule lumen(GO:1904724) |
0.1 | 3.2 | GO:0031092 | platelet alpha granule membrane(GO:0031092) |
0.0 | 3.0 | GO:0022625 | cytosolic large ribosomal subunit(GO:0022625) |
0.0 | 2.8 | GO:0005884 | actin filament(GO:0005884) |
0.0 | 2.7 | GO:0070821 | tertiary granule membrane(GO:0070821) |
0.3 | 2.4 | GO:0032133 | chromosome passenger complex(GO:0032133) |
0.4 | 2.3 | GO:0016035 | zeta DNA polymerase complex(GO:0016035) |
0.0 | 2.3 | GO:0001669 | acrosomal vesicle(GO:0001669) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
2.0 | 6.0 | GO:0005519 | cytoskeletal regulatory protein binding(GO:0005519) |
0.0 | 5.4 | GO:0008307 | structural constituent of muscle(GO:0008307) |
0.8 | 3.4 | GO:0034041 | sterol-transporting ATPase activity(GO:0034041) |
0.1 | 3.2 | GO:0004691 | cAMP-dependent protein kinase activity(GO:0004691) |
0.0 | 3.0 | GO:0003735 | structural constituent of ribosome(GO:0003735) |
0.3 | 2.7 | GO:0019834 | phospholipase A2 inhibitor activity(GO:0019834) |
0.0 | 2.7 | GO:0030971 | receptor tyrosine kinase binding(GO:0030971) |
0.0 | 2.7 | GO:0000980 | RNA polymerase II distal enhancer sequence-specific DNA binding(GO:0000980) |
0.0 | 2.6 | GO:0005089 | Rho guanyl-nucleotide exchange factor activity(GO:0005089) |
0.5 | 2.4 | GO:0047280 | nicotinamide phosphoribosyltransferase activity(GO:0047280) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 4.5 | PID CDC42 REG PATHWAY | Regulation of CDC42 activity |
0.1 | 3.9 | PID CD40 PATHWAY | CD40/CD40L signaling |
0.0 | 3.8 | NABA ECM AFFILIATED | Genes encoding proteins affiliated structurally or functionally to extracellular matrix proteins |
0.0 | 2.8 | PID PTP1B PATHWAY | Signaling events mediated by PTP1B |
0.0 | 2.7 | PID HNF3A PATHWAY | FOXA1 transcription factor network |
0.1 | 2.4 | PID ANTHRAX PATHWAY | Cellular roles of Anthrax toxin |
0.0 | 2.4 | PID FOXM1 PATHWAY | FOXM1 transcription factor network |
0.0 | 2.3 | PID THROMBIN PAR1 PATHWAY | PAR1-mediated thrombin signaling events |
0.0 | 2.3 | PID SMAD2 3NUCLEAR PATHWAY | Regulation of nuclear SMAD2/3 signaling |
0.1 | 2.1 | SA REG CASCADE OF CYCLIN EXPR | Expression of cyclins regulates progression through the cell cycle by activating cyclin-dependent kinases. |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.4 | 5.6 | REACTOME DIGESTION OF DIETARY CARBOHYDRATE | Genes involved in Digestion of dietary carbohydrate |
0.1 | 5.6 | REACTOME STRIATED MUSCLE CONTRACTION | Genes involved in Striated Muscle Contraction |
0.0 | 4.5 | REACTOME MITOTIC PROMETAPHASE | Genes involved in Mitotic Prometaphase |
0.1 | 3.7 | REACTOME ABCA TRANSPORTERS IN LIPID HOMEOSTASIS | Genes involved in ABCA transporters in lipid homeostasis |
0.1 | 3.3 | REACTOME DEGRADATION OF THE EXTRACELLULAR MATRIX | Genes involved in Degradation of the extracellular matrix |
0.1 | 3.2 | REACTOME PECAM1 INTERACTIONS | Genes involved in PECAM1 interactions |
0.0 | 3.0 | REACTOME PEPTIDE CHAIN ELONGATION | Genes involved in Peptide chain elongation |
0.0 | 2.7 | REACTOME GLYCOLYSIS | Genes involved in Glycolysis |
0.1 | 2.5 | REACTOME TERMINATION OF O GLYCAN BIOSYNTHESIS | Genes involved in Termination of O-glycan biosynthesis |
0.0 | 2.5 | REACTOME DOWNREGULATION OF SMAD2 3 SMAD4 TRANSCRIPTIONAL ACTIVITY | Genes involved in Downregulation of SMAD2/3:SMAD4 transcriptional activity |