Illumina Body Map 2 (GSE30611)
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
SOX7 | hg38_v1_chr8_-_10730498_10730525 | -0.49 | 4.8e-03 | Click! |
PINX1 | hg38_v1_chr8_-_10839818_10839855 | -0.43 | 1.4e-02 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr1_-_26067622 Show fit | 2.70 |
ENST00000374272.4
|
tripartite motif containing 63 |
|
chr4_-_176269213 Show fit | 1.94 |
ENST00000296525.7
|
ankyrin repeat and SOCS box containing 5 |
|
chr1_-_89272775 Show fit | 1.63 |
ENST00000443807.1
|
guanylate binding protein 5 |
|
chr8_+_28338640 Show fit | 1.59 |
ENST00000522209.1
|
prepronociceptin |
|
chr16_+_28292485 Show fit | 1.58 |
ENST00000341901.5
|
SH3 domain binding kinase 1 |
|
chr14_-_106117159 Show fit | 1.42 |
ENST00000390601.3
|
immunoglobulin heavy variable 3-11 |
|
chr1_+_158931539 Show fit | 1.41 |
ENST00000368140.6
ENST00000368138.7 ENST00000392254.6 ENST00000392252.7 ENST00000368135.4 |
pyrin and HIN domain family member 1 |
|
chr16_-_20352707 Show fit | 1.34 |
ENST00000396134.6
ENST00000573567.5 ENST00000570757.5 ENST00000396138.9 ENST00000571174.5 ENST00000576688.2 |
uromodulin |
|
chr16_-_20352857 Show fit | 1.30 |
ENST00000577168.2
|
uromodulin |
|
chr2_-_89222461 Show fit | 1.20 |
ENST00000482769.1
|
immunoglobulin kappa variable 2-28 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 5.9 | GO:0006958 | complement activation, classical pathway(GO:0006958) |
0.5 | 2.7 | GO:0014878 | response to electrical stimulus involved in regulation of muscle adaptation(GO:0014878) |
0.7 | 2.6 | GO:0072233 | thick ascending limb development(GO:0072023) metanephric thick ascending limb development(GO:0072233) |
0.1 | 2.1 | GO:0006570 | tyrosine metabolic process(GO:0006570) |
0.1 | 1.7 | GO:0071420 | cellular response to histamine(GO:0071420) |
0.2 | 1.6 | GO:0032621 | interleukin-18 production(GO:0032621) |
0.0 | 1.6 | GO:0007202 | activation of phospholipase C activity(GO:0007202) |
0.0 | 1.5 | GO:0007218 | neuropeptide signaling pathway(GO:0007218) |
0.1 | 1.3 | GO:0071386 | cellular response to corticosterone stimulus(GO:0071386) |
0.3 | 1.1 | GO:0033634 | positive regulation of cell-cell adhesion mediated by integrin(GO:0033634) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 2.9 | GO:0032590 | dendrite membrane(GO:0032590) |
0.0 | 2.7 | GO:0031430 | M band(GO:0031430) |
0.0 | 2.7 | GO:0060170 | ciliary membrane(GO:0060170) |
0.0 | 1.1 | GO:0042571 | immunoglobulin complex, circulating(GO:0042571) |
0.1 | 0.7 | GO:0034448 | EGO complex(GO:0034448) |
0.0 | 0.5 | GO:0000124 | SAGA complex(GO:0000124) |
0.0 | 0.4 | GO:0035692 | macrophage migration inhibitory factor receptor complex(GO:0035692) |
0.0 | 0.1 | GO:0016035 | zeta DNA polymerase complex(GO:0016035) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 5.9 | GO:0003823 | antigen binding(GO:0003823) |
0.1 | 2.7 | GO:0031432 | titin binding(GO:0031432) |
0.1 | 2.6 | GO:0019864 | IgG binding(GO:0019864) |
0.4 | 2.1 | GO:0004447 | iodide peroxidase activity(GO:0004447) |
0.1 | 1.7 | GO:0008503 | benzodiazepine receptor activity(GO:0008503) |
0.2 | 1.6 | GO:0001515 | opioid peptide activity(GO:0001515) |
0.0 | 1.6 | GO:0019992 | diacylglycerol binding(GO:0019992) |
0.0 | 1.3 | GO:0005388 | calcium-transporting ATPase activity(GO:0005388) |
0.2 | 1.1 | GO:0031726 | CCR1 chemokine receptor binding(GO:0031726) |
0.1 | 0.8 | GO:0003956 | NAD(P)+-protein-arginine ADP-ribosyltransferase activity(GO:0003956) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 1.6 | PID RAS PATHWAY | Regulation of Ras family activation |
0.0 | 1.1 | PID SYNDECAN 4 PATHWAY | Syndecan-4-mediated signaling events |
0.0 | 0.7 | PID IL27 PATHWAY | IL27-mediated signaling events |
0.0 | 0.4 | SA MMP CYTOKINE CONNECTION | Cytokines can induce activation of matrix metalloproteinases, which degrade extracellular matrix. |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 5.4 | REACTOME ANTIGEN PROCESSING UBIQUITINATION PROTEASOME DEGRADATION | Genes involved in Antigen processing: Ubiquitination & Proteasome degradation |
0.1 | 2.1 | REACTOME AMINE DERIVED HORMONES | Genes involved in Amine-derived hormones |
0.0 | 1.7 | REACTOME GABA A RECEPTOR ACTIVATION | Genes involved in GABA A receptor activation |
0.0 | 1.6 | REACTOME INTERFERON GAMMA SIGNALING | Genes involved in Interferon gamma signaling |
0.0 | 1.1 | REACTOME CHEMOKINE RECEPTORS BIND CHEMOKINES | Genes involved in Chemokine receptors bind chemokines |
0.0 | 0.7 | REACTOME CITRIC ACID CYCLE TCA CYCLE | Genes involved in Citric acid cycle (TCA cycle) |
0.0 | 0.7 | REACTOME IL RECEPTOR SHC SIGNALING | Genes involved in Interleukin receptor SHC signaling |
0.0 | 0.4 | REACTOME HYALURONAN UPTAKE AND DEGRADATION | Genes involved in Hyaluronan uptake and degradation |
0.0 | 0.4 | REACTOME REGULATION OF AMPK ACTIVITY VIA LKB1 | Genes involved in Regulation of AMPK activity via LKB1 |