Illumina Body Map 2 (GSE30611)
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
SRF | hg38_v1_chr6_+_43171260_43171281 | 0.69 | 1.3e-05 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr19_-_45322867 Show fit | 57.00 |
ENST00000221476.4
|
creatine kinase, M-type |
|
chr15_-_34795541 Show fit | 44.24 |
ENST00000290378.6
|
actin alpha cardiac muscle 1 |
|
chr1_-_229434086 Show fit | 37.31 |
ENST00000366684.7
ENST00000684723.1 ENST00000366683.4 |
actin alpha 1, skeletal muscle |
|
chr20_+_36541484 Show fit | 34.33 |
ENST00000346786.2
|
myosin light chain 9 |
|
chr20_+_36541511 Show fit | 34.06 |
ENST00000279022.7
|
myosin light chain 9 |
|
chr2_+_73892967 Show fit | 32.07 |
ENST00000409731.7
ENST00000409918.5 ENST00000442912.5 ENST00000345517.8 ENST00000409624.1 |
actin gamma 2, smooth muscle |
|
chr19_+_11539894 Show fit | 29.57 |
ENST00000586059.5
|
calponin 1 |
|
chr19_-_35757009 Show fit | 24.95 |
ENST00000587965.1
ENST00000004982.6 |
heat shock protein family B (small) member 6 |
|
chr14_-_93976550 Show fit | 21.75 |
ENST00000555019.6
|
ankyrin repeat and SOCS box containing 2 |
|
chr14_-_93976719 Show fit | 18.74 |
ENST00000555287.1
|
ankyrin repeat and SOCS box containing 2 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
20.4 | 122.4 | GO:0090131 | mesenchyme migration(GO:0090131) |
0.7 | 68.4 | GO:0045652 | regulation of megakaryocyte differentiation(GO:0045652) |
3.4 | 57.0 | GO:0006600 | creatine metabolic process(GO:0006600) |
10.4 | 52.1 | GO:1901846 | positive regulation of cell communication by electrical coupling involved in cardiac conduction(GO:1901846) |
0.3 | 40.5 | GO:0045445 | myoblast differentiation(GO:0045445) |
4.4 | 35.3 | GO:0002074 | extraocular skeletal muscle development(GO:0002074) |
0.0 | 31.6 | GO:0003012 | muscle system process(GO:0003012) |
1.2 | 29.6 | GO:1904706 | negative regulation of vascular smooth muscle cell proliferation(GO:1904706) |
9.6 | 28.8 | GO:0072209 | mesangial cell-matrix adhesion(GO:0035759) positive regulation of granulocyte colony-stimulating factor production(GO:0071657) metanephric mesangial cell differentiation(GO:0072209) metanephric glomerular mesangial cell differentiation(GO:0072254) positive regulation of macrophage colony-stimulating factor production(GO:1901258) |
3.2 | 25.6 | GO:0055011 | atrial cardiac muscle cell differentiation(GO:0055011) atrial cardiac muscle cell development(GO:0055014) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
2.5 | 115.7 | GO:0005859 | muscle myosin complex(GO:0005859) |
3.7 | 52.1 | GO:0030314 | junctional membrane complex(GO:0030314) sarcoplasmic reticulum lumen(GO:0033018) |
0.0 | 45.1 | GO:0005925 | focal adhesion(GO:0005925) |
8.8 | 44.2 | GO:0042643 | actomyosin, actin portion(GO:0042643) |
1.0 | 42.8 | GO:0005865 | striated muscle thin filament(GO:0005865) |
3.4 | 40.5 | GO:0031466 | Cul5-RING ubiquitin ligase complex(GO:0031466) |
3.2 | 32.1 | GO:0032982 | myosin filament(GO:0032982) |
0.6 | 31.8 | GO:0031430 | M band(GO:0031430) |
1.0 | 28.8 | GO:0046930 | pore complex(GO:0046930) |
6.7 | 26.7 | GO:0005863 | striated muscle myosin thick filament(GO:0005863) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
3.5 | 83.2 | GO:0032036 | myosin heavy chain binding(GO:0032036) |
0.8 | 82.5 | GO:0017022 | myosin binding(GO:0017022) |
7.1 | 57.0 | GO:0004111 | creatine kinase activity(GO:0004111) |
1.3 | 50.8 | GO:0051371 | muscle alpha-actinin binding(GO:0051371) |
0.2 | 50.6 | GO:0044325 | ion channel binding(GO:0044325) |
0.1 | 38.2 | GO:0061630 | ubiquitin protein ligase activity(GO:0061630) |
0.3 | 33.0 | GO:0050681 | androgen receptor binding(GO:0050681) |
2.6 | 28.8 | GO:0043199 | sulfate binding(GO:0043199) |
0.1 | 28.3 | GO:0001077 | transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding(GO:0001077) |
0.8 | 25.0 | GO:0005212 | structural constituent of eye lens(GO:0005212) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.7 | 94.4 | PID ILK PATHWAY | Integrin-linked kinase signaling |
0.4 | 57.0 | PID RB 1PATHWAY | Regulation of retinoblastoma protein |
0.4 | 36.6 | PID RHOA PATHWAY | RhoA signaling pathway |
0.4 | 29.5 | SIG REGULATION OF THE ACTIN CYTOSKELETON BY RHO GTPASES | Genes related to regulation of the actin cytoskeleton |
0.5 | 25.6 | PID HDAC CLASSIII PATHWAY | Signaling events mediated by HDAC Class III |
0.1 | 18.7 | PID CMYB PATHWAY | C-MYB transcription factor network |
0.1 | 17.9 | PID AR PATHWAY | Coregulation of Androgen receptor activity |
0.2 | 17.2 | PID ECADHERIN STABILIZATION PATHWAY | Stabilization and expansion of the E-cadherin adherens junction |
0.1 | 11.8 | PID HIF1 TFPATHWAY | HIF-1-alpha transcription factor network |
0.0 | 10.8 | NABA ECM AFFILIATED | Genes encoding proteins affiliated structurally or functionally to extracellular matrix proteins |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
2.0 | 128.6 | REACTOME SMOOTH MUSCLE CONTRACTION | Genes involved in Smooth Muscle Contraction |
0.2 | 51.3 | REACTOME METABOLISM OF AMINO ACIDS AND DERIVATIVES | Genes involved in Metabolism of amino acids and derivatives |
0.8 | 48.0 | REACTOME STRIATED MUSCLE CONTRACTION | Genes involved in Striated Muscle Contraction |
0.1 | 40.5 | REACTOME ANTIGEN PROCESSING UBIQUITINATION PROTEASOME DEGRADATION | Genes involved in Antigen processing: Ubiquitination & Proteasome degradation |
0.2 | 28.8 | REACTOME IMMUNOREGULATORY INTERACTIONS BETWEEN A LYMPHOID AND A NON LYMPHOID CELL | Genes involved in Immunoregulatory interactions between a Lymphoid and a non-Lymphoid cell |
0.1 | 22.4 | REACTOME PPARA ACTIVATES GENE EXPRESSION | Genes involved in PPARA Activates Gene Expression |
0.9 | 16.5 | REACTOME REVERSIBLE HYDRATION OF CARBON DIOXIDE | Genes involved in Reversible Hydration of Carbon Dioxide |
0.1 | 14.1 | REACTOME INTEGRIN CELL SURFACE INTERACTIONS | Genes involved in Integrin cell surface interactions |
0.3 | 11.6 | REACTOME CELL EXTRACELLULAR MATRIX INTERACTIONS | Genes involved in Cell-extracellular matrix interactions |
0.1 | 8.4 | REACTOME PIP3 ACTIVATES AKT SIGNALING | Genes involved in PIP3 activates AKT signaling |