Illumina Body Map 2 (GSE30611)
Gene Symbol | Gene ID | Gene Info |
---|---|---|
ENSG00000115415.20 | signal transducer and activator of transcription 1 | |
ENSG00000168610.16 | signal transducer and activator of transcription 3 | |
ENSG00000113916.18 | BCL6 transcription repressor |
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
STAT1 | hg38_v1_chr2_-_191013955_191014112 | -0.46 | 8.0e-03 | Click! |
STAT3 | hg38_v1_chr17_-_42388360_42388463 | 0.28 | 1.1e-01 | Click! |
BCL6 | hg38_v1_chr3_-_187737943_187737954 | -0.21 | 2.5e-01 | Click! |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 22.5 | GO:0006958 | complement activation, classical pathway(GO:0006958) |
0.8 | 17.1 | GO:0017187 | peptidyl-glutamic acid carboxylation(GO:0017187) protein carboxylation(GO:0018214) |
1.4 | 12.7 | GO:0045959 | regulation of complement activation, classical pathway(GO:0030450) negative regulation of complement activation, classical pathway(GO:0045959) |
0.9 | 12.4 | GO:0043152 | induction of bacterial agglutination(GO:0043152) |
3.7 | 11.0 | GO:0060739 | mesenchymal-epithelial cell signaling involved in prostate gland development(GO:0060739) |
0.1 | 8.6 | GO:0030212 | hyaluronan metabolic process(GO:0030212) |
2.8 | 8.3 | GO:0007199 | G-protein coupled receptor signaling pathway coupled to cGMP nucleotide second messenger(GO:0007199) response to muscle activity involved in regulation of muscle adaptation(GO:0014873) |
2.1 | 8.3 | GO:0060708 | spongiotrophoblast differentiation(GO:0060708) |
0.2 | 7.2 | GO:0006825 | copper ion transport(GO:0006825) |
0.2 | 7.1 | GO:0014850 | response to muscle activity(GO:0014850) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 58.9 | GO:0072562 | blood microparticle(GO:0072562) |
0.0 | 27.0 | GO:0005615 | extracellular space(GO:0005615) |
1.2 | 16.2 | GO:0005577 | fibrinogen complex(GO:0005577) |
0.1 | 13.3 | GO:0044217 | other organism(GO:0044215) other organism cell(GO:0044216) other organism part(GO:0044217) |
0.3 | 12.8 | GO:0005614 | interstitial matrix(GO:0005614) |
0.4 | 9.7 | GO:0031089 | platelet dense granule lumen(GO:0031089) |
0.0 | 9.7 | GO:0005925 | focal adhesion(GO:0005925) |
0.0 | 8.1 | GO:0005578 | proteinaceous extracellular matrix(GO:0005578) |
1.7 | 6.9 | GO:0031838 | haptoglobin-hemoglobin complex(GO:0031838) |
0.5 | 6.9 | GO:0030478 | actin cap(GO:0030478) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 28.0 | GO:0004252 | serine-type endopeptidase activity(GO:0004252) |
0.1 | 19.1 | GO:0004867 | serine-type endopeptidase inhibitor activity(GO:0004867) |
0.1 | 14.1 | GO:0004866 | endopeptidase inhibitor activity(GO:0004866) |
1.2 | 11.0 | GO:0045545 | syndecan binding(GO:0045545) |
0.1 | 8.7 | GO:0005518 | collagen binding(GO:0005518) |
0.1 | 8.6 | GO:0001784 | phosphotyrosine binding(GO:0001784) |
0.3 | 8.3 | GO:0031702 | type 1 angiotensin receptor binding(GO:0031702) |
0.0 | 7.5 | GO:0030674 | protein binding, bridging(GO:0030674) |
1.8 | 7.0 | GO:0031727 | CCR2 chemokine receptor binding(GO:0031727) |
0.7 | 7.0 | GO:0016724 | ferroxidase activity(GO:0004322) oxidoreductase activity, oxidizing metal ions, oxygen as acceptor(GO:0016724) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 35.3 | NABA ECM REGULATORS | Genes encoding enzymes and their regulators involved in the remodeling of the extracellular matrix |
0.4 | 32.5 | PID INTEGRIN3 PATHWAY | Beta3 integrin cell surface interactions |
0.0 | 15.8 | NABA MATRISOME ASSOCIATED | Ensemble of genes encoding ECM-associated proteins including ECM-affilaited proteins, ECM regulators and secreted factors |
0.1 | 12.7 | PID HNF3A PATHWAY | FOXA1 transcription factor network |
0.2 | 10.5 | PID IL23 PATHWAY | IL23-mediated signaling events |
0.2 | 10.3 | PID PRL SIGNALING EVENTS PATHWAY | Signaling events mediated by PRL |
0.0 | 9.9 | NABA ECM GLYCOPROTEINS | Genes encoding structural ECM glycoproteins |
0.0 | 9.6 | NABA ECM AFFILIATED | Genes encoding proteins affiliated structurally or functionally to extracellular matrix proteins |
0.1 | 8.1 | PID HIF1 TFPATHWAY | HIF-1-alpha transcription factor network |
0.1 | 6.1 | PID HNF3B PATHWAY | FOXA2 and FOXA3 transcription factor networks |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
1.8 | 34.6 | REACTOME COMMON PATHWAY | Genes involved in Common Pathway |
0.1 | 18.0 | REACTOME INTEGRIN CELL SURFACE INTERACTIONS | Genes involved in Integrin cell surface interactions |
0.6 | 14.3 | REACTOME REGULATION OF COMPLEMENT CASCADE | Genes involved in Regulation of Complement cascade |
0.0 | 9.7 | REACTOME PPARA ACTIVATES GENE EXPRESSION | Genes involved in PPARA Activates Gene Expression |
0.1 | 8.4 | REACTOME SMOOTH MUSCLE CONTRACTION | Genes involved in Smooth Muscle Contraction |
0.4 | 8.3 | REACTOME IL 6 SIGNALING | Genes involved in Interleukin-6 signaling |
0.3 | 7.7 | REACTOME INTRINSIC PATHWAY | Genes involved in Intrinsic Pathway |
0.5 | 7.6 | REACTOME CREATION OF C4 AND C2 ACTIVATORS | Genes involved in Creation of C4 and C2 activators |
0.2 | 7.2 | REACTOME METAL ION SLC TRANSPORTERS | Genes involved in Metal ion SLC transporters |
0.1 | 6.0 | REACTOME GROWTH HORMONE RECEPTOR SIGNALING | Genes involved in Growth hormone receptor signaling |