Illumina Body Map 2 (GSE30611)
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
TAF1 | hg38_v1_chrX_+_71366222_71366264 | 0.52 | 2.2e-03 | Click! |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 81.5 | GO:0006351 | transcription, DNA-templated(GO:0006351) |
0.1 | 49.8 | GO:0006397 | mRNA processing(GO:0006397) |
0.3 | 43.8 | GO:0006614 | SRP-dependent cotranslational protein targeting to membrane(GO:0006614) |
0.2 | 28.4 | GO:0006369 | termination of RNA polymerase II transcription(GO:0006369) |
1.0 | 16.4 | GO:0080182 | histone H3-K4 trimethylation(GO:0080182) |
0.2 | 14.8 | GO:0016073 | snRNA metabolic process(GO:0016073) |
0.4 | 14.1 | GO:0043153 | entrainment of circadian clock by photoperiod(GO:0043153) |
2.7 | 13.4 | GO:0002913 | positive regulation of T cell anergy(GO:0002669) positive regulation of lymphocyte anergy(GO:0002913) |
0.2 | 13.2 | GO:0006409 | tRNA export from nucleus(GO:0006409) tRNA-containing ribonucleoprotein complex export from nucleus(GO:0071431) |
1.0 | 12.7 | GO:0000414 | regulation of histone H3-K36 methylation(GO:0000414) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 157.5 | GO:0005654 | nucleoplasm(GO:0005654) |
0.1 | 65.3 | GO:0016604 | nuclear body(GO:0016604) |
0.0 | 52.0 | GO:0005634 | nucleus(GO:0005634) |
0.3 | 34.1 | GO:0022625 | cytosolic large ribosomal subunit(GO:0022625) |
0.2 | 29.9 | GO:0071013 | catalytic step 2 spliceosome(GO:0071013) |
0.6 | 28.0 | GO:0044665 | MLL1/2 complex(GO:0044665) MLL1 complex(GO:0071339) |
0.1 | 20.9 | GO:0016605 | PML body(GO:0016605) |
0.2 | 19.7 | GO:0031519 | PcG protein complex(GO:0031519) |
0.2 | 19.7 | GO:0000123 | histone acetyltransferase complex(GO:0000123) |
0.3 | 18.8 | GO:0016592 | mediator complex(GO:0016592) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 240.2 | GO:0003676 | nucleic acid binding(GO:0003676) |
0.2 | 54.3 | GO:0003735 | structural constituent of ribosome(GO:0003735) |
0.3 | 30.8 | GO:0003724 | RNA helicase activity(GO:0003724) ATP-dependent RNA helicase activity(GO:0004004) RNA-dependent ATPase activity(GO:0008186) |
0.1 | 29.8 | GO:0061630 | ubiquitin protein ligase activity(GO:0061630) |
0.1 | 29.5 | GO:0003682 | chromatin binding(GO:0003682) |
0.3 | 22.0 | GO:0003743 | translation initiation factor activity(GO:0003743) |
1.6 | 21.3 | GO:0043995 | histone acetyltransferase activity (H4-K5 specific)(GO:0043995) histone acetyltransferase activity (H4-K8 specific)(GO:0043996) histone acetyltransferase activity (H4-K16 specific)(GO:0046972) |
0.1 | 20.8 | GO:0019208 | phosphatase regulator activity(GO:0019208) |
0.2 | 20.6 | GO:0061733 | peptide-lysine-N-acetyltransferase activity(GO:0061733) |
0.1 | 19.2 | GO:0000980 | RNA polymerase II distal enhancer sequence-specific DNA binding(GO:0000980) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.4 | 20.7 | PID IL12 STAT4 PATHWAY | IL12 signaling mediated by STAT4 |
0.2 | 20.2 | PID AR TF PATHWAY | Regulation of Androgen receptor activity |
0.1 | 15.9 | PID P53 DOWNSTREAM PATHWAY | Direct p53 effectors |
0.1 | 15.6 | PID RB 1PATHWAY | Regulation of retinoblastoma protein |
0.2 | 14.6 | ST ERK1 ERK2 MAPK PATHWAY | ERK1/ERK2 MAPK Pathway |
0.2 | 13.2 | PID HES HEY PATHWAY | Notch-mediated HES/HEY network |
0.5 | 12.8 | PID TCR RAS PATHWAY | Ras signaling in the CD4+ TCR pathway |
0.1 | 12.0 | PID PLK1 PATHWAY | PLK1 signaling events |
0.2 | 11.3 | PID MAPK TRK PATHWAY | Trk receptor signaling mediated by the MAPK pathway |
0.5 | 10.0 | PID TCR JNK PATHWAY | JNK signaling in the CD4+ TCR pathway |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.4 | 65.1 | REACTOME PEPTIDE CHAIN ELONGATION | Genes involved in Peptide chain elongation |
0.1 | 24.4 | REACTOME GENERIC TRANSCRIPTION PATHWAY | Genes involved in Generic Transcription Pathway |
0.3 | 22.7 | REACTOME MEIOTIC SYNAPSIS | Genes involved in Meiotic Synapsis |
0.1 | 18.0 | REACTOME TRANSCRIPTIONAL REGULATION OF WHITE ADIPOCYTE DIFFERENTIATION | Genes involved in Transcriptional Regulation of White Adipocyte Differentiation |
0.2 | 17.5 | REACTOME MAPK TARGETS NUCLEAR EVENTS MEDIATED BY MAP KINASES | Genes involved in MAPK targets/ Nuclear events mediated by MAP kinases |
0.3 | 17.2 | REACTOME MRNA 3 END PROCESSING | Genes involved in mRNA 3'-end processing |
0.8 | 16.6 | REACTOME TRANSLOCATION OF ZAP 70 TO IMMUNOLOGICAL SYNAPSE | Genes involved in Translocation of ZAP-70 to Immunological synapse |
0.1 | 15.8 | REACTOME ANTIGEN PROCESSING UBIQUITINATION PROTEASOME DEGRADATION | Genes involved in Antigen processing: Ubiquitination & Proteasome degradation |
0.3 | 13.8 | REACTOME CIRCADIAN REPRESSION OF EXPRESSION BY REV ERBA | Genes involved in Circadian Repression of Expression by REV-ERBA |
0.5 | 12.8 | REACTOME SIGNALLING TO P38 VIA RIT AND RIN | Genes involved in Signalling to p38 via RIT and RIN |