Illumina Body Map 2 (GSE30611)
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
TBX5 | hg38_v1_chr12_-_114406133_114406150 | 0.09 | 6.2e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr19_-_45322867 Show fit | 4.37 |
ENST00000221476.4
|
creatine kinase, M-type |
|
chr14_-_23435652 Show fit | 3.42 |
ENST00000355349.4
|
myosin heavy chain 7 |
|
chr11_+_1919694 Show fit | 3.39 |
ENST00000278317.11
ENST00000453458.5 ENST00000381557.6 ENST00000381579.7 ENST00000381589.7 ENST00000381563.8 ENST00000344578.8 ENST00000381558.6 |
troponin T3, fast skeletal type |
|
chr11_-_107719657 Show fit | 2.98 |
ENST00000525934.1
ENST00000531293.1 |
sarcolipin |
|
chr12_+_80707625 Show fit | 2.97 |
ENST00000228641.4
|
myogenic factor 6 |
|
chr20_+_31819302 Show fit | 2.83 |
ENST00000375994.6
|
myosin light chain kinase 2 |
|
chr20_+_31819348 Show fit | 2.68 |
ENST00000375985.5
|
myosin light chain kinase 2 |
|
chr8_-_74321532 Show fit | 2.56 |
ENST00000342232.5
|
junctophilin 1 |
|
chr19_+_35031263 Show fit | 2.51 |
ENST00000640135.1
ENST00000596348.2 |
sodium voltage-gated channel beta subunit 1 |
|
chr3_-_39192584 Show fit | 2.38 |
ENST00000340369.4
ENST00000421646.1 ENST00000396251.1 |
xin actin binding repeat containing 1 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 6.6 | GO:0003009 | skeletal muscle contraction(GO:0003009) |
0.8 | 5.5 | GO:0032971 | regulation of muscle filament sliding(GO:0032971) |
0.1 | 5.4 | GO:0007274 | neuromuscular synaptic transmission(GO:0007274) |
0.3 | 4.4 | GO:0006600 | creatine metabolic process(GO:0006600) |
0.0 | 4.1 | GO:0000186 | activation of MAPKK activity(GO:0000186) |
0.4 | 4.0 | GO:0003172 | primary heart field specification(GO:0003138) sinoatrial valve development(GO:0003172) sinoatrial valve morphogenesis(GO:0003185) |
0.3 | 3.8 | GO:1900625 | regulation of monocyte aggregation(GO:1900623) positive regulation of monocyte aggregation(GO:1900625) |
0.1 | 3.8 | GO:0006853 | carnitine shuttle(GO:0006853) |
0.9 | 3.4 | GO:0014724 | regulation of twitch skeletal muscle contraction(GO:0014724) |
0.0 | 3.3 | GO:0048477 | oogenesis(GO:0048477) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 14.8 | GO:0030016 | myofibril(GO:0030016) |
0.2 | 6.1 | GO:0032982 | myosin filament(GO:0032982) |
0.3 | 5.4 | GO:0005861 | troponin complex(GO:0005861) |
0.0 | 5.2 | GO:0055037 | recycling endosome(GO:0055037) |
0.0 | 4.7 | GO:0005741 | mitochondrial outer membrane(GO:0005741) |
0.0 | 4.5 | GO:0015030 | Cajal body(GO:0015030) |
0.3 | 3.8 | GO:0035692 | macrophage migration inhibitory factor receptor complex(GO:0035692) |
0.0 | 3.6 | GO:0034707 | chloride channel complex(GO:0034707) |
0.1 | 3.2 | GO:0001518 | voltage-gated sodium channel complex(GO:0001518) |
0.0 | 3.0 | GO:0033017 | sarcoplasmic reticulum membrane(GO:0033017) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 6.4 | GO:0030898 | actin-dependent ATPase activity(GO:0030898) |
0.2 | 5.6 | GO:0003680 | AT DNA binding(GO:0003680) |
0.6 | 5.5 | GO:0004687 | myosin light chain kinase activity(GO:0004687) |
0.1 | 5.4 | GO:0070888 | E-box binding(GO:0070888) |
0.5 | 4.4 | GO:0004111 | creatine kinase activity(GO:0004111) |
0.5 | 4.1 | GO:0004095 | carnitine O-palmitoyltransferase activity(GO:0004095) |
0.1 | 4.0 | GO:0004709 | MAP kinase kinase kinase activity(GO:0004709) |
0.1 | 3.9 | GO:0005540 | hyaluronic acid binding(GO:0005540) |
0.4 | 3.5 | GO:0051373 | FATZ binding(GO:0051373) |
0.2 | 3.5 | GO:0038036 | sphingosine-1-phosphate receptor activity(GO:0038036) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 9.9 | PID RB 1PATHWAY | Regulation of retinoblastoma protein |
0.0 | 5.6 | PID MYC ACTIV PATHWAY | Validated targets of C-MYC transcriptional activation |
0.1 | 4.3 | SIG REGULATION OF THE ACTIN CYTOSKELETON BY RHO GTPASES | Genes related to regulation of the actin cytoskeleton |
0.1 | 3.8 | SA MMP CYTOKINE CONNECTION | Cytokines can induce activation of matrix metalloproteinases, which degrade extracellular matrix. |
0.1 | 3.5 | PID S1P META PATHWAY | Sphingosine 1-phosphate (S1P) pathway |
0.0 | 2.9 | PID HDAC CLASSII PATHWAY | Signaling events mediated by HDAC Class II |
0.0 | 2.9 | PID MTOR 4PATHWAY | mTOR signaling pathway |
0.1 | 2.8 | PID TCR JNK PATHWAY | JNK signaling in the CD4+ TCR pathway |
0.0 | 2.8 | PID P53 DOWNSTREAM PATHWAY | Direct p53 effectors |
0.1 | 2.7 | PID HDAC CLASSIII PATHWAY | Signaling events mediated by HDAC Class III |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 5.4 | REACTOME STRIATED MUSCLE CONTRACTION | Genes involved in Striated Muscle Contraction |
0.2 | 4.4 | REACTOME ABCA TRANSPORTERS IN LIPID HOMEOSTASIS | Genes involved in ABCA transporters in lipid homeostasis |
0.1 | 4.3 | REACTOME ACTIVATED AMPK STIMULATES FATTY ACID OXIDATION IN MUSCLE | Genes involved in Activated AMPK stimulates fatty-acid oxidation in muscle |
0.1 | 4.0 | REACTOME ERK MAPK TARGETS | Genes involved in ERK/MAPK targets |
0.0 | 3.5 | REACTOME FACTORS INVOLVED IN MEGAKARYOCYTE DEVELOPMENT AND PLATELET PRODUCTION | Genes involved in Factors involved in megakaryocyte development and platelet production |
0.1 | 3.2 | REACTOME INTERACTION BETWEEN L1 AND ANKYRINS | Genes involved in Interaction between L1 and Ankyrins |
0.0 | 3.1 | REACTOME ANTIGEN PROCESSING CROSS PRESENTATION | Genes involved in Antigen processing-Cross presentation |
0.1 | 2.9 | REACTOME INHIBITION OF VOLTAGE GATED CA2 CHANNELS VIA GBETA GAMMA SUBUNITS | Genes involved in Inhibition of voltage gated Ca2+ channels via Gbeta/gamma subunits |
0.0 | 2.9 | REACTOME G ALPHA I SIGNALLING EVENTS | Genes involved in G alpha (i) signalling events |
0.0 | 2.9 | REACTOME ANTIGEN PROCESSING UBIQUITINATION PROTEASOME DEGRADATION | Genes involved in Antigen processing: Ubiquitination & Proteasome degradation |