Illumina Body Map 2 (GSE30611)
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
TEAD1 | hg38_v1_chr11_+_12674397_12674442 | 0.91 | 4.2e-13 | Click! |
TEAD3 | hg38_v1_chr6_-_35497042_35497117 | 0.80 | 3.7e-08 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr6_-_131951364 Show fit | 58.81 |
ENST00000367976.4
|
cellular communication network factor 2 |
|
chr1_-_16018005 Show fit | 38.16 |
ENST00000406363.2
ENST00000411503.5 ENST00000311890.14 ENST00000487046.1 |
heat shock protein family B (small) member 7 |
|
chr3_-_119660580 Show fit | 34.50 |
ENST00000493094.6
ENST00000264231.7 ENST00000468801.1 |
popeye domain containing 2 |
|
chr10_-_88952763 Show fit | 30.75 |
ENST00000224784.10
|
actin alpha 2, smooth muscle |
|
chr1_-_214551556 Show fit | 30.60 |
ENST00000366956.10
|
protein tyrosine phosphatase non-receptor type 14 |
|
chr14_-_23435652 Show fit | 30.54 |
ENST00000355349.4
|
myosin heavy chain 7 |
|
chr17_-_42423246 Show fit | 26.55 |
ENST00000357037.6
|
caveolae associated protein 1 |
|
chr1_+_85580751 Show fit | 26.18 |
ENST00000451137.7
|
cellular communication network factor 1 |
|
chr1_-_16017825 Show fit | 26.09 |
ENST00000463576.5
|
heat shock protein family B (small) member 7 |
|
chr7_+_116525524 Show fit | 24.47 |
ENST00000405348.6
|
caveolin 1 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 96.3 | GO:0006936 | muscle contraction(GO:0006936) |
3.0 | 73.8 | GO:0048739 | cardiac muscle fiber development(GO:0048739) |
17.2 | 68.6 | GO:1900085 | negative regulation of peptidyl-tyrosine autophosphorylation(GO:1900085) negative regulation of inward rectifier potassium channel activity(GO:1903609) |
1.4 | 62.5 | GO:0035329 | hippo signaling(GO:0035329) |
1.0 | 56.4 | GO:0003301 | physiological muscle hypertrophy(GO:0003298) physiological cardiac muscle hypertrophy(GO:0003301) cell growth involved in cardiac muscle cell development(GO:0061049) |
0.4 | 55.7 | GO:0008016 | regulation of heart contraction(GO:0008016) |
12.0 | 47.8 | GO:0014724 | regulation of twitch skeletal muscle contraction(GO:0014724) |
2.4 | 46.3 | GO:0072307 | metanephric nephron tubule epithelial cell differentiation(GO:0072257) regulation of metanephric nephron tubule epithelial cell differentiation(GO:0072307) |
7.6 | 45.9 | GO:0090131 | mesenchyme migration(GO:0090131) |
0.3 | 44.4 | GO:0030449 | regulation of complement activation(GO:0030449) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.6 | 161.5 | GO:0030018 | Z disc(GO:0030018) |
2.6 | 119.1 | GO:0005859 | muscle myosin complex(GO:0005859) |
0.2 | 105.6 | GO:0016324 | apical plasma membrane(GO:0016324) |
0.1 | 84.7 | GO:0005667 | transcription factor complex(GO:0005667) |
4.2 | 72.1 | GO:0097512 | cardiac myofibril(GO:0097512) |
3.4 | 67.5 | GO:0034098 | VCP-NPL4-UFD1 AAA ATPase complex(GO:0034098) |
0.8 | 64.4 | GO:0016235 | aggresome(GO:0016235) |
1.2 | 54.6 | GO:0036379 | myofilament(GO:0036379) |
0.2 | 45.1 | GO:0072562 | blood microparticle(GO:0072562) |
0.2 | 44.8 | GO:0042383 | sarcolemma(GO:0042383) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
1.5 | 196.1 | GO:0008307 | structural constituent of muscle(GO:0008307) |
2.5 | 76.3 | GO:0005523 | tropomyosin binding(GO:0005523) |
17.2 | 68.6 | GO:0070320 | inward rectifier potassium channel inhibitor activity(GO:0070320) |
2.2 | 67.8 | GO:0031005 | filamin binding(GO:0031005) |
0.1 | 58.3 | GO:0001077 | transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding(GO:0001077) |
0.1 | 44.6 | GO:0003924 | GTPase activity(GO:0003924) |
1.8 | 43.4 | GO:0032036 | myosin heavy chain binding(GO:0032036) |
1.2 | 38.4 | GO:0005212 | structural constituent of eye lens(GO:0005212) |
0.9 | 38.2 | GO:0070064 | proline-rich region binding(GO:0070064) |
0.3 | 38.1 | GO:0030971 | receptor tyrosine kinase binding(GO:0030971) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
1.6 | 74.8 | PID WNT CANONICAL PATHWAY | Canonical Wnt signaling pathway |
0.3 | 40.2 | PID SHP2 PATHWAY | SHP2 signaling |
0.4 | 39.0 | PID HNF3A PATHWAY | FOXA1 transcription factor network |
0.4 | 38.6 | NABA COLLAGENS | Genes encoding collagen proteins |
0.3 | 37.2 | PID ILK PATHWAY | Integrin-linked kinase signaling |
0.3 | 33.9 | PID NOTCH PATHWAY | Notch signaling pathway |
0.4 | 31.8 | PID FAK PATHWAY | Signaling events mediated by focal adhesion kinase |
0.4 | 31.2 | PID DELTA NP63 PATHWAY | Validated transcriptional targets of deltaNp63 isoforms |
0.2 | 31.0 | PID ERBB1 DOWNSTREAM PATHWAY | ErbB1 downstream signaling |
1.2 | 27.7 | PID INTEGRIN4 PATHWAY | Alpha6 beta4 integrin-ligand interactions |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
2.0 | 127.5 | REACTOME SMOOTH MUSCLE CONTRACTION | Genes involved in Smooth Muscle Contraction |
2.1 | 89.6 | REACTOME HORMONE SENSITIVE LIPASE HSL MEDIATED TRIACYLGLYCEROL HYDROLYSIS | Genes involved in Hormone-sensitive lipase (HSL)-mediated triacylglycerol hydrolysis |
1.5 | 86.6 | REACTOME STRIATED MUSCLE CONTRACTION | Genes involved in Striated Muscle Contraction |
2.1 | 84.7 | REACTOME SIGNALING BY HIPPO | Genes involved in Signaling by Hippo |
0.4 | 37.1 | REACTOME NETRIN1 SIGNALING | Genes involved in Netrin-1 signaling |
0.8 | 33.7 | REACTOME YAP1 AND WWTR1 TAZ STIMULATED GENE EXPRESSION | Genes involved in YAP1- and WWTR1 (TAZ)-stimulated gene expression |
0.2 | 32.8 | REACTOME CELL JUNCTION ORGANIZATION | Genes involved in Cell junction organization |
0.3 | 29.8 | REACTOME COLLAGEN FORMATION | Genes involved in Collagen formation |
0.7 | 28.8 | REACTOME SEMA4D INDUCED CELL MIGRATION AND GROWTH CONE COLLAPSE | Genes involved in Sema4D induced cell migration and growth-cone collapse |
0.6 | 26.2 | REACTOME TIE2 SIGNALING | Genes involved in Tie2 Signaling |