Illumina Body Map 2 (GSE30611)
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
TFAP2B | hg38_v1_chr6_+_50818701_50818723 | 0.02 | 9.2e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr17_-_63700100 Show fit | 5.89 |
ENST00000578993.5
ENST00000259006.8 ENST00000583211.5 |
LIM domain containing 2 |
|
chr4_+_1721470 Show fit | 4.38 |
ENST00000612220.5
ENST00000313288.9 |
transforming acidic coiled-coil containing protein 3 |
|
chr4_-_83109843 Show fit | 3.35 |
ENST00000411416.6
|
placenta associated 8 |
|
chr5_-_157575767 Show fit | 3.22 |
ENST00000257527.9
|
ADAM metallopeptidase domain 19 |
|
chr16_-_88706353 Show fit | 3.18 |
ENST00000567844.1
ENST00000312838.9 |
ring finger protein 166 |
|
chr1_+_209756032 Show fit | 3.10 |
ENST00000400959.7
ENST00000367025.8 |
TRAF3 interacting protein 3 |
|
chr1_+_32251239 Show fit | 2.83 |
ENST00000373564.7
ENST00000482949.5 ENST00000336890.10 ENST00000495610.6 |
LCK proto-oncogene, Src family tyrosine kinase |
|
chr19_+_7645895 Show fit | 2.81 |
ENST00000602355.1
|
syntaxin binding protein 2 |
|
chr1_+_206507520 Show fit | 2.65 |
ENST00000579436.7
|
Ras association domain family member 5 |
|
chr16_-_88706262 Show fit | 2.63 |
ENST00000562544.1
|
ring finger protein 166 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 9.3 | GO:0043312 | neutrophil activation involved in immune response(GO:0002283) neutrophil degranulation(GO:0043312) |
0.1 | 9.2 | GO:0006614 | SRP-dependent cotranslational protein targeting to membrane(GO:0006614) |
0.1 | 8.1 | GO:0006904 | vesicle docking involved in exocytosis(GO:0006904) |
0.2 | 7.9 | GO:0030033 | microvillus assembly(GO:0030033) |
0.1 | 5.3 | GO:0006509 | membrane protein ectodomain proteolysis(GO:0006509) |
0.4 | 5.1 | GO:2001199 | negative regulation of dendritic cell differentiation(GO:2001199) |
0.0 | 5.0 | GO:0032436 | positive regulation of proteasomal ubiquitin-dependent protein catabolic process(GO:0032436) |
0.5 | 4.9 | GO:0050859 | negative regulation of B cell receptor signaling pathway(GO:0050859) |
0.3 | 4.7 | GO:2000623 | regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay(GO:2000622) negative regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay(GO:2000623) |
0.6 | 4.5 | GO:0044027 | hypermethylation of CpG island(GO:0044027) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 13.3 | GO:0035578 | azurophil granule lumen(GO:0035578) |
0.0 | 7.9 | GO:0000790 | nuclear chromatin(GO:0000790) |
0.1 | 7.5 | GO:0022625 | cytosolic large ribosomal subunit(GO:0022625) |
0.7 | 6.8 | GO:0044194 | cytolytic granule(GO:0044194) |
0.1 | 6.6 | GO:0035577 | azurophil granule membrane(GO:0035577) |
1.6 | 4.9 | GO:0036284 | tubulobulbar complex(GO:0036284) |
0.4 | 4.9 | GO:0042105 | alpha-beta T cell receptor complex(GO:0042105) |
0.1 | 4.7 | GO:1990124 | messenger ribonucleoprotein complex(GO:1990124) |
0.0 | 3.5 | GO:0000922 | spindle pole(GO:0000922) |
0.0 | 3.3 | GO:0005798 | Golgi-associated vesicle(GO:0005798) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 8.8 | GO:0003735 | structural constituent of ribosome(GO:0003735) |
0.0 | 7.0 | GO:0005096 | GTPase activator activity(GO:0005096) |
0.1 | 6.4 | GO:0031624 | ubiquitin conjugating enzyme binding(GO:0031624) |
0.0 | 5.4 | GO:0004222 | metalloendopeptidase activity(GO:0004222) |
0.1 | 5.2 | GO:0005001 | transmembrane receptor protein tyrosine phosphatase activity(GO:0005001) transmembrane receptor protein phosphatase activity(GO:0019198) |
0.5 | 4.8 | GO:0030348 | syntaxin-3 binding(GO:0030348) |
0.2 | 4.7 | GO:0008494 | translation activator activity(GO:0008494) |
0.1 | 4.6 | GO:0043325 | phosphatidylinositol-3,4-bisphosphate binding(GO:0043325) |
0.0 | 4.5 | GO:0001078 | transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding(GO:0001078) |
0.2 | 4.4 | GO:0017017 | MAP kinase tyrosine/serine/threonine phosphatase activity(GO:0017017) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 13.1 | PID CD8 TCR PATHWAY | TCR signaling in naïve CD8+ T cells |
0.0 | 7.2 | PID SMAD2 3NUCLEAR PATHWAY | Regulation of nuclear SMAD2/3 signaling |
0.1 | 6.5 | PID PI3KCI PATHWAY | Class I PI3K signaling events |
0.1 | 5.7 | PID AURORA A PATHWAY | Aurora A signaling |
0.2 | 5.3 | PID TCR JNK PATHWAY | JNK signaling in the CD4+ TCR pathway |
0.1 | 5.0 | PID MAPK TRK PATHWAY | Trk receptor signaling mediated by the MAPK pathway |
0.0 | 4.2 | PID RAC1 PATHWAY | RAC1 signaling pathway |
0.1 | 4.1 | ST ERK1 ERK2 MAPK PATHWAY | ERK1/ERK2 MAPK Pathway |
0.0 | 3.1 | PID RHOA REG PATHWAY | Regulation of RhoA activity |
0.0 | 3.0 | PID IL4 2PATHWAY | IL4-mediated signaling events |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 7.9 | REACTOME PEPTIDE CHAIN ELONGATION | Genes involved in Peptide chain elongation |
0.3 | 7.8 | REACTOME PECAM1 INTERACTIONS | Genes involved in PECAM1 interactions |
0.0 | 6.9 | REACTOME SIGNALING BY RHO GTPASES | Genes involved in Signaling by Rho GTPases |
0.0 | 4.9 | REACTOME G ALPHA Q SIGNALLING EVENTS | Genes involved in G alpha (q) signalling events |
0.1 | 4.2 | REACTOME MITOCHONDRIAL PROTEIN IMPORT | Genes involved in Mitochondrial Protein Import |
0.1 | 4.1 | REACTOME DEADENYLATION OF MRNA | Genes involved in Deadenylation of mRNA |
0.1 | 3.9 | REACTOME GENERATION OF SECOND MESSENGER MOLECULES | Genes involved in Generation of second messenger molecules |
0.1 | 3.6 | REACTOME RAP1 SIGNALLING | Genes involved in Rap1 signalling |
0.1 | 3.3 | REACTOME SMAD2 SMAD3 SMAD4 HETEROTRIMER REGULATES TRANSCRIPTION | Genes involved in SMAD2/SMAD3:SMAD4 heterotrimer regulates transcription |
0.1 | 3.1 | REACTOME ANTIGEN ACTIVATES B CELL RECEPTOR LEADING TO GENERATION OF SECOND MESSENGERS | Genes involved in Antigen Activates B Cell Receptor Leading to Generation of Second Messengers |