Illumina Body Map 2 (GSE30611)
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
TLX2 | hg38_v1_chr2_+_74514442_74514494 | -0.38 | 3.3e-02 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr1_+_153357846 Show fit | 2.87 |
ENST00000368738.4
|
S100 calcium binding protein A9 |
|
chr1_-_153390976 Show fit | 2.74 |
ENST00000368732.5
ENST00000368733.4 |
S100 calcium binding protein A8 |
|
chr19_+_51761167 Show fit | 2.68 |
ENST00000340023.7
ENST00000599326.1 ENST00000598953.1 |
formyl peptide receptor 2 |
|
chr19_+_7669043 Show fit | 2.47 |
ENST00000221515.6
|
resistin |
|
chr9_+_114323098 Show fit | 2.26 |
ENST00000259396.9
|
orosomucoid 1 |
|
chr2_+_102311502 Show fit | 2.26 |
ENST00000404917.6
ENST00000410040.5 |
interleukin 1 receptor like 1 interleukin 18 receptor 1 |
|
chr20_+_45207025 Show fit | 2.12 |
ENST00000372781.4
|
semenogelin 1 |
|
chr11_+_62419025 Show fit | 2.09 |
ENST00000278282.3
|
secretoglobin family 1A member 1 |
|
chr12_-_10849464 Show fit | 2.08 |
ENST00000544994.5
ENST00000228811.8 ENST00000540107.2 |
proline rich 4 |
|
chr7_-_99976017 Show fit | 2.01 |
ENST00000411734.1
ENST00000292401.9 |
alpha-2-glycoprotein 1, zinc-binding |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 8.5 | GO:0043312 | neutrophil activation involved in immune response(GO:0002283) neutrophil degranulation(GO:0043312) |
1.0 | 4.1 | GO:2000196 | positive regulation of female gonad development(GO:2000196) |
0.5 | 4.1 | GO:0038172 | interleukin-33-mediated signaling pathway(GO:0038172) |
0.8 | 3.8 | GO:1902573 | positive regulation of serine-type endopeptidase activity(GO:1900005) positive regulation of serine-type peptidase activity(GO:1902573) |
0.1 | 3.7 | GO:0042347 | negative regulation of NF-kappaB import into nucleus(GO:0042347) |
0.7 | 2.9 | GO:0035606 | peptidyl-cysteine S-trans-nitrosylation(GO:0035606) |
0.1 | 2.9 | GO:0000027 | ribosomal large subunit assembly(GO:0000027) |
0.0 | 2.9 | GO:0001895 | retina homeostasis(GO:0001895) |
0.0 | 2.9 | GO:0006614 | SRP-dependent cotranslational protein targeting to membrane(GO:0006614) |
0.9 | 2.8 | GO:0002665 | negative regulation of T cell tolerance induction(GO:0002665) negative regulation of T cell anergy(GO:0002668) negative regulation of lymphocyte anergy(GO:0002912) regulation of lymphotoxin A production(GO:0032681) positive regulation of lymphotoxin A production(GO:0032761) regulation of lymphotoxin A biosynthetic process(GO:0043016) positive regulation of lymphotoxin A biosynthetic process(GO:0043017) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 11.7 | GO:0009897 | external side of plasma membrane(GO:0009897) |
0.1 | 10.2 | GO:0035580 | specific granule lumen(GO:0035580) |
0.1 | 7.4 | GO:0022625 | cytosolic large ribosomal subunit(GO:0022625) |
0.0 | 6.2 | GO:0101003 | ficolin-1-rich granule membrane(GO:0101003) |
0.0 | 5.3 | GO:0034774 | secretory granule lumen(GO:0034774) |
0.0 | 3.5 | GO:0032587 | ruffle membrane(GO:0032587) |
0.3 | 3.4 | GO:0098560 | cytoplasmic side of early endosome membrane(GO:0098559) cytoplasmic side of late endosome membrane(GO:0098560) |
0.1 | 3.0 | GO:0042629 | mast cell granule(GO:0042629) |
0.0 | 2.6 | GO:0001726 | ruffle(GO:0001726) |
0.0 | 2.5 | GO:0030176 | integral component of endoplasmic reticulum membrane(GO:0030176) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 6.9 | GO:0003735 | structural constituent of ribosome(GO:0003735) |
0.6 | 5.7 | GO:0035662 | Toll-like receptor 4 binding(GO:0035662) |
1.4 | 4.1 | GO:0002113 | interleukin-33 binding(GO:0002113) |
0.1 | 4.1 | GO:0015026 | coreceptor activity(GO:0015026) |
0.1 | 3.7 | GO:0019992 | diacylglycerol binding(GO:0019992) |
0.1 | 3.4 | GO:0043325 | phosphatidylinositol-3,4-bisphosphate binding(GO:0043325) |
0.1 | 3.4 | GO:0050699 | WW domain binding(GO:0050699) |
0.1 | 2.9 | GO:0005068 | transmembrane receptor protein tyrosine kinase adaptor activity(GO:0005068) |
0.4 | 2.7 | GO:0004982 | N-formyl peptide receptor activity(GO:0004982) |
0.1 | 2.4 | GO:0042813 | Wnt-activated receptor activity(GO:0042813) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 9.0 | PID CD8 TCR PATHWAY | TCR signaling in naïve CD8+ T cells |
0.1 | 6.1 | PID TOLL ENDOGENOUS PATHWAY | Endogenous TLR signaling |
0.1 | 3.6 | SA MMP CYTOKINE CONNECTION | Cytokines can induce activation of matrix metalloproteinases, which degrade extracellular matrix. |
0.1 | 2.9 | PID IL23 PATHWAY | IL23-mediated signaling events |
0.0 | 2.5 | PID PI3KCI PATHWAY | Class I PI3K signaling events |
0.1 | 2.4 | PID IL5 PATHWAY | IL5-mediated signaling events |
0.0 | 2.1 | PID RAC1 PATHWAY | RAC1 signaling pathway |
0.0 | 1.7 | PID P53 REGULATION PATHWAY | p53 pathway |
0.0 | 1.6 | PID DELTA NP63 PATHWAY | Validated transcriptional targets of deltaNp63 isoforms |
0.0 | 1.5 | PID INTEGRIN2 PATHWAY | Beta2 integrin cell surface interactions |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 9.0 | REACTOME PEPTIDE CHAIN ELONGATION | Genes involved in Peptide chain elongation |
0.1 | 3.8 | REACTOME RAP1 SIGNALLING | Genes involved in Rap1 signalling |
0.1 | 3.6 | REACTOME CD28 DEPENDENT VAV1 PATHWAY | Genes involved in CD28 dependent Vav1 pathway |
0.1 | 3.1 | REACTOME REGULATION OF SIGNALING BY CBL | Genes involved in Regulation of signaling by CBL |
0.0 | 2.8 | REACTOME CYTOCHROME P450 ARRANGED BY SUBSTRATE TYPE | Genes involved in Cytochrome P450 - arranged by substrate type |
0.0 | 2.6 | REACTOME PEPTIDE LIGAND BINDING RECEPTORS | Genes involved in Peptide ligand-binding receptors |
0.1 | 2.3 | REACTOME PLATELET CALCIUM HOMEOSTASIS | Genes involved in Platelet calcium homeostasis |
0.0 | 2.1 | REACTOME AMYLOIDS | Genes involved in Amyloids |
0.1 | 1.9 | REACTOME P2Y RECEPTORS | Genes involved in P2Y receptors |
0.1 | 1.8 | REACTOME PHOSPHORYLATION OF CD3 AND TCR ZETA CHAINS | Genes involved in Phosphorylation of CD3 and TCR zeta chains |