Illumina Body Map 2 (GSE30611)
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
TP53 | hg38_v1_chr17_-_7687427_7687538 | 0.42 | 1.7e-02 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr14_-_106235582 Show fit | 5.53 |
ENST00000390607.2
|
immunoglobulin heavy variable 3-21 |
|
chr8_+_23102913 Show fit | 5.20 |
ENST00000356864.4
|
TNF receptor superfamily member 10c |
|
chr11_-_47378527 Show fit | 5.15 |
ENST00000378538.8
|
Spi-1 proto-oncogene |
|
chr11_-_47378391 Show fit | 4.84 |
ENST00000227163.8
|
Spi-1 proto-oncogene |
|
chr11_-_47378494 Show fit | 4.84 |
ENST00000533030.1
|
Spi-1 proto-oncogene |
|
chr11_-_47378479 Show fit | 4.65 |
ENST00000533968.1
|
Spi-1 proto-oncogene |
|
chr11_+_65879791 Show fit | 4.12 |
ENST00000528419.6
ENST00000307886.8 ENST00000526034.2 ENST00000679584.1 ENST00000680443.1 ENST00000680670.1 |
cathepsin W |
|
chr18_+_59899988 Show fit | 3.96 |
ENST00000316660.7
ENST00000269518.9 |
phorbol-12-myristate-13-acetate-induced protein 1 |
|
chr8_-_23225061 Show fit | 3.94 |
ENST00000613472.1
ENST00000221132.8 |
TNF receptor superfamily member 10a |
|
chr19_+_3136026 Show fit | 3.36 |
ENST00000262958.4
|
G protein subunit alpha 15 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
2.8 | 19.8 | GO:0044027 | hypermethylation of CpG island(GO:0044027) |
0.1 | 9.3 | GO:0043154 | negative regulation of cysteine-type endopeptidase activity involved in apoptotic process(GO:0043154) |
0.3 | 8.6 | GO:0097296 | activation of cysteine-type endopeptidase activity involved in apoptotic signaling pathway(GO:0097296) |
0.3 | 5.9 | GO:0022417 | protein maturation by protein folding(GO:0022417) |
0.1 | 5.5 | GO:0006910 | phagocytosis, recognition(GO:0006910) |
0.1 | 5.4 | GO:0034314 | Arp2/3 complex-mediated actin nucleation(GO:0034314) |
1.8 | 5.3 | GO:0034769 | basement membrane disassembly(GO:0034769) |
0.0 | 4.8 | GO:0001706 | endoderm formation(GO:0001706) |
1.5 | 4.6 | GO:0071663 | granzyme B production(GO:0071613) regulation of granzyme B production(GO:0071661) positive regulation of granzyme B production(GO:0071663) |
0.2 | 4.0 | GO:0010917 | negative regulation of mitochondrial membrane potential(GO:0010917) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 22.0 | GO:0000790 | nuclear chromatin(GO:0000790) |
0.0 | 18.7 | GO:0009986 | cell surface(GO:0009986) |
0.1 | 6.1 | GO:0035577 | azurophil granule membrane(GO:0035577) |
1.2 | 5.9 | GO:1990425 | ryanodine receptor complex(GO:1990425) |
0.1 | 5.5 | GO:0042571 | immunoglobulin complex, circulating(GO:0042571) |
0.1 | 5.5 | GO:0101003 | ficolin-1-rich granule membrane(GO:0101003) |
1.8 | 5.4 | GO:0036284 | tubulobulbar complex(GO:0036284) |
0.8 | 5.3 | GO:0036021 | endolysosome lumen(GO:0036021) |
0.1 | 4.6 | GO:0005834 | heterotrimeric G-protein complex(GO:0005834) |
0.0 | 4.5 | GO:0005903 | brush border(GO:0005903) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
1.4 | 19.5 | GO:0051525 | NFAT protein binding(GO:0051525) |
3.7 | 14.7 | GO:0045569 | TRAIL binding(GO:0045569) |
0.2 | 8.4 | GO:0043394 | proteoglycan binding(GO:0043394) |
0.1 | 6.2 | GO:0005544 | calcium-dependent phospholipid binding(GO:0005544) |
0.7 | 6.0 | GO:0043120 | tumor necrosis factor binding(GO:0043120) |
0.3 | 5.9 | GO:0034713 | type I transforming growth factor beta receptor binding(GO:0034713) |
0.0 | 5.9 | GO:0005200 | structural constituent of cytoskeleton(GO:0005200) |
0.1 | 5.5 | GO:0034987 | immunoglobulin receptor binding(GO:0034987) |
0.1 | 4.6 | GO:0042288 | MHC class I protein binding(GO:0042288) |
0.1 | 4.3 | GO:0017112 | Rab guanyl-nucleotide exchange factor activity(GO:0017112) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 20.8 | PID IL4 2PATHWAY | IL4-mediated signaling events |
0.2 | 14.7 | PID TRAIL PATHWAY | TRAIL signaling pathway |
0.0 | 12.1 | NABA ECM REGULATORS | Genes encoding enzymes and their regulators involved in the remodeling of the extracellular matrix |
0.1 | 11.2 | PID ERBB1 DOWNSTREAM PATHWAY | ErbB1 downstream signaling |
0.0 | 7.5 | NABA ECM AFFILIATED | Genes encoding proteins affiliated structurally or functionally to extracellular matrix proteins |
0.1 | 7.4 | PID TAP63 PATHWAY | Validated transcriptional targets of TAp63 isoforms |
0.3 | 5.6 | PID ALK2 PATHWAY | ALK2 signaling events |
0.2 | 4.8 | SA FAS SIGNALING | The TNF-type receptor Fas induces apoptosis on ligand binding. |
0.2 | 3.9 | SA PROGRAMMED CELL DEATH | Programmed cell death, or apoptosis, eliminates damaged or unneeded cells. |
0.1 | 3.6 | PID P38 GAMMA DELTA PATHWAY | Signaling mediated by p38-gamma and p38-delta |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 8.2 | REACTOME EXTRINSIC PATHWAY FOR APOPTOSIS | Genes involved in Extrinsic Pathway for Apoptosis |
0.2 | 7.5 | REACTOME ACTIVATION OF BH3 ONLY PROTEINS | Genes involved in Activation of BH3-only proteins |
0.2 | 6.4 | REACTOME P38MAPK EVENTS | Genes involved in p38MAPK events |
0.2 | 5.9 | REACTOME TGF BETA RECEPTOR SIGNALING IN EMT EPITHELIAL TO MESENCHYMAL TRANSITION | Genes involved in TGF-beta receptor signaling in EMT (epithelial to mesenchymal transition) |
0.5 | 5.3 | REACTOME ENDOSOMAL VACUOLAR PATHWAY | Genes involved in Endosomal/Vacuolar pathway |
0.1 | 4.9 | REACTOME CHEMOKINE RECEPTORS BIND CHEMOKINES | Genes involved in Chemokine receptors bind chemokines |
0.0 | 3.7 | REACTOME RESPONSE TO ELEVATED PLATELET CYTOSOLIC CA2 | Genes involved in Response to elevated platelet cytosolic Ca2+ |
0.1 | 3.6 | REACTOME ACYL CHAIN REMODELLING OF PI | Genes involved in Acyl chain remodelling of PI |
0.2 | 3.4 | REACTOME REGULATION OF INSULIN SECRETION BY ACETYLCHOLINE | Genes involved in Regulation of Insulin Secretion by Acetylcholine |
0.0 | 3.0 | REACTOME SRP DEPENDENT COTRANSLATIONAL PROTEIN TARGETING TO MEMBRANE | Genes involved in SRP-dependent cotranslational protein targeting to membrane |