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Illumina Body Map 2 (GSE30611)

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Results for UAAGACU

Z-value: 0.27

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miRNA associated with seed UAAGACU

NamemiRBASE accession
hsa-miR-499a-5p
MIMAT0002870

Activity profile of UAAGACU motif

Sorted Z-values of UAAGACU motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
chr5_-_159099909 0.60 ENST00000313708.11
EBF1
EBF transcription factor 1
chr8_-_23854796 0.49 ENST00000290271.7
STC1
stanniocalcin 1
chr5_+_55738017 0.47 ENST00000514278.6
ENST00000353507.9
ENST00000506511.5
ENST00000505374.6
ENST00000515709.5
ENST00000506848.5
ENST00000514679.5
DDX4
DEAD-box helicase 4
chrY_+_12904860 0.42 ENST00000336079.8
DDX3Y
DEAD-box helicase 3 Y-linked
chr7_-_140176970 0.26 ENST00000397560.7
KDM7A
lysine demethylase 7A
chr3_+_61561561 0.26 ENST00000474889.6
PTPRG
protein tyrosine phosphatase receptor type G
chr16_+_54930827 0.26 ENST00000394636.9
IRX5
iroquois homeobox 5
chr11_-_86955385 0.25 ENST00000531380.2
FZD4
frizzled class receptor 4
chr2_-_86337654 0.25 ENST00000165698.9
REEP1
receptor accessory protein 1
chr6_+_21593742 0.25 ENST00000244745.4
SOX4
SRY-box transcription factor 4
chr2_+_176122712 0.24 ENST00000249499.8
HOXD9
homeobox D9
chr10_+_61901678 0.22 ENST00000644638.1
ENST00000681100.1
ENST00000279873.12
ARID5B
AT-rich interaction domain 5B
chr1_+_42682388 0.22 ENST00000321358.12
ENST00000332220.10
YBX1
Y-box binding protein 1
chr17_+_68512379 0.20 ENST00000392711.5
ENST00000585427.5
ENST00000589228.6
ENST00000536854.6
ENST00000588702.5
ENST00000589309.5
PRKAR1A
protein kinase cAMP-dependent type I regulatory subunit alpha
chr1_-_225653045 0.19 ENST00000366843.6
ENST00000366844.7
ENAH
ENAH actin regulator
chr7_-_120858066 0.18 ENST00000222747.8
TSPAN12
tetraspanin 12
chr6_+_104957099 0.17 ENST00000345080.5
LIN28B
lin-28 homolog B
chr1_-_205813177 0.17 ENST00000367137.4
SLC41A1
solute carrier family 41 member 1
chrX_+_68829009 0.16 ENST00000204961.5
EFNB1
ephrin B1
chr20_+_52972347 0.16 ENST00000371497.10
TSHZ2
teashirt zinc finger homeobox 2
chr9_-_125189721 0.16 ENST00000456642.1
ENST00000373547.9
ENST00000415905.5
ENST00000451402.5
PPP6C
protein phosphatase 6 catalytic subunit
chr11_-_128522264 0.15 ENST00000531611.5
ETS1
ETS proto-oncogene 1, transcription factor
chr8_+_57994455 0.15 ENST00000361488.7
FAM110B
family with sequence similarity 110 member B
chr10_-_32056376 0.15 ENST00000302418.5
KIF5B
kinesin family member 5B
chr22_+_21417357 0.14 ENST00000407464.7
HIC2
HIC ZBTB transcriptional repressor 2
chr9_-_34126661 0.14 ENST00000361264.9
DCAF12
DDB1 and CUL4 associated factor 12
chr2_+_176116768 0.14 ENST00000249501.5
HOXD10
homeobox D10
chr17_-_8630713 0.13 ENST00000411957.1
ENST00000360416.8
MYH10
myosin heavy chain 10
chr3_+_43286512 0.13 ENST00000454177.5
ENST00000429705.6
ENST00000296088.12
ENST00000437827.1
SNRK
SNF related kinase
chr8_+_11704151 0.13 ENST00000526716.5
ENST00000532059.6
ENST00000335135.8
ENST00000622443.3
GATA4
GATA binding protein 4
chr16_-_80804581 0.12 ENST00000570137.7
CDYL2
chromodomain Y like 2
chr13_+_101452629 0.12 ENST00000622834.4
ENST00000545560.6
ENST00000376180.8
ITGBL1
integrin subunit beta like 1
chr18_-_28177102 0.11 ENST00000413878.2
ENST00000269141.8
CDH2
cadherin 2
chr6_+_36678699 0.11 ENST00000405375.5
ENST00000244741.10
ENST00000373711.3
CDKN1A
cyclin dependent kinase inhibitor 1A
chr18_-_61892997 0.11 ENST00000312828.4
RNF152
ring finger protein 152
chr6_-_13711817 0.11 ENST00000011619.6
RANBP9
RAN binding protein 9
chr16_-_46621345 0.11 ENST00000303383.8
SHCBP1
SHC binding and spindle associated 1
chr9_-_23821275 0.10 ENST00000380110.8
ELAVL2
ELAV like RNA binding protein 2
chr14_+_105314711 0.10 ENST00000447393.6
ENST00000547217.5
PACS2
phosphofurin acidic cluster sorting protein 2
chr10_-_35642286 0.09 ENST00000374694.3
FZD8
frizzled class receptor 8
chr4_+_139015751 0.08 ENST00000280614.4
NOCT
nocturnin
chr10_-_931684 0.08 ENST00000316157.8
LARP4B
La ribonucleoprotein 4B
chr5_-_115544734 0.07 ENST00000274457.5
FEM1C
fem-1 homolog C
chr17_+_40062956 0.07 ENST00000450525.7
THRA
thyroid hormone receptor alpha
chr12_+_67648737 0.07 ENST00000344096.4
ENST00000393555.3
DYRK2
dual specificity tyrosine phosphorylation regulated kinase 2
chr9_+_94030776 0.07 ENST00000375360.7
PTPDC1
protein tyrosine phosphatase domain containing 1
chr14_-_50231570 0.07 ENST00000216373.10
SOS2
SOS Ras/Rho guanine nucleotide exchange factor 2
chr12_-_92929236 0.07 ENST00000322349.13
EEA1
early endosome antigen 1
chr1_-_38873322 0.06 ENST00000397572.5
ENST00000494695.4
MYCBP
MYC binding protein
chr1_+_89633086 0.06 ENST00000370454.9
LRRC8C
leucine rich repeat containing 8 VRAC subunit C
chr13_+_49997019 0.06 ENST00000420995.6
ENST00000356017.8
ENST00000378182.4
ENST00000457662.2
TRIM13
tripartite motif containing 13
chr10_-_87818153 0.06 ENST00000308448.11
ENST00000680024.1
ATAD1
ATPase family AAA domain containing 1
chr4_+_122826679 0.06 ENST00000264498.8
FGF2
fibroblast growth factor 2
chr3_-_15332526 0.06 ENST00000383791.8
SH3BP5
SH3 domain binding protein 5
chr22_+_29883158 0.05 ENST00000333027.7
ENST00000401950.7
ENST00000445401.5
ENST00000323630.9
ENST00000351488.7
MTMR3
myotubularin related protein 3
chr13_-_49792675 0.05 ENST00000261667.8
KPNA3
karyopherin subunit alpha 3
chr2_-_64653906 0.05 ENST00000313349.3
SERTAD2
SERTA domain containing 2
chr1_+_19596960 0.05 ENST00000617872.4
ENST00000322753.7
ENST00000602662.1
MICOS10
NBL1
mitochondrial contact site and cristae organizing system subunit 10
NBL1, DAN family BMP antagonist
chr2_-_171894227 0.05 ENST00000422440.7
SLC25A12
solute carrier family 25 member 12
chr4_+_158768955 0.04 ENST00000264433.11
FNIP2
folliculin interacting protein 2
chr9_+_79571767 0.03 ENST00000376544.7
TLE4
TLE family member 4, transcriptional corepressor
chr6_+_163414637 0.03 ENST00000453779.6
ENST00000275262.11
ENST00000392127.6
QKI
QKI, KH domain containing RNA binding
chr8_+_42896883 0.03 ENST00000307602.9
HOOK3
hook microtubule tethering protein 3
chr17_+_60600178 0.03 ENST00000629650.2
ENST00000305921.8
PPM1D
protein phosphatase, Mg2+/Mn2+ dependent 1D
chr7_+_139231225 0.03 ENST00000473989.8
UBN2
ubinuclein 2
chr12_+_71754834 0.03 ENST00000261263.5
RAB21
RAB21, member RAS oncogene family
chr19_-_3700390 0.03 ENST00000679885.1
ENST00000537021.1
ENST00000589578.5
ENST00000539785.5
ENST00000335312.8
PIP5K1C
phosphatidylinositol-4-phosphate 5-kinase type 1 gamma
chr12_-_42144823 0.03 ENST00000398675.8
GXYLT1
glucoside xylosyltransferase 1
chr15_+_56918612 0.02 ENST00000438423.6
ENST00000267811.9
ENST00000333725.10
ENST00000559609.5
TCF12
transcription factor 12
chr14_-_105021043 0.02 ENST00000392590.3
ENST00000336219.4
CDCA4
cell division cycle associated 4
chr6_+_37257762 0.02 ENST00000373491.3
TBC1D22B
TBC1 domain family member 22B
chr15_+_44537136 0.02 ENST00000261868.10
ENST00000535391.5
EIF3J
eukaryotic translation initiation factor 3 subunit J
chr7_-_44885446 0.02 ENST00000395699.5
PURB
purine rich element binding protein B
chr5_-_131796921 0.02 ENST00000307968.11
ENST00000307954.12
FNIP1
folliculin interacting protein 1
chr2_-_207166818 0.02 ENST00000423015.5
KLF7
Kruppel like factor 7
chr18_-_24397784 0.01 ENST00000399441.4
ENST00000319481.8
OSBPL1A
oxysterol binding protein like 1A
chr3_+_89107649 0.01 ENST00000452448.6
ENST00000494014.1
EPHA3
EPH receptor A3
chr3_-_72446623 0.01 ENST00000477973.4
RYBP
RING1 and YY1 binding protein
chr1_+_35931076 0.01 ENST00000397828.3
ENST00000373191.9
AGO3
argonaute RISC catalytic component 3
chr1_+_96721762 0.01 ENST00000675735.1
ENST00000609116.5
ENST00000674951.1
ENST00000426398.3
ENST00000370197.5
ENST00000370198.5
PTBP2
polypyrimidine tract binding protein 2
chr6_-_165662100 0.01 ENST00000366882.6
PDE10A
phosphodiesterase 10A
chr1_-_16352420 0.01 ENST00000375592.8
FBXO42
F-box protein 42
chr10_+_11823348 0.01 ENST00000277570.10
ENST00000622831.4
PROSER2
proline and serine rich 2
chr7_+_65873068 0.01 ENST00000360768.5
VKORC1L1
vitamin K epoxide reductase complex subunit 1 like 1
chr2_+_66435558 0.01 ENST00000488550.5
MEIS1
Meis homeobox 1
chr7_-_106661148 0.00 ENST00000523505.3
CCDC71L
coiled-coil domain containing 71 like

Network of associatons between targets according to the STRING database.

First level regulatory network of UAAGACU

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.3 GO:0061300 cerebellum vasculature development(GO:0061300)
0.1 0.3 GO:0035574 histone H4-K20 demethylation(GO:0035574)
0.0 0.2 GO:0035905 N-terminal peptidyl-lysine acetylation(GO:0018076) ascending aorta development(GO:0035905) ascending aorta morphogenesis(GO:0035910)
0.0 0.3 GO:0060040 retinal bipolar neuron differentiation(GO:0060040)
0.0 0.5 GO:0001886 endothelial cell morphogenesis(GO:0001886)
0.0 0.3 GO:1903385 regulation of homophilic cell adhesion(GO:1903385)
0.0 0.1 GO:1905150 regulation of voltage-gated sodium channel activity(GO:1905150)
0.0 0.1 GO:0003290 atrial septum secundum morphogenesis(GO:0003290) embryonic heart tube anterior/posterior pattern specification(GO:0035054)
0.0 0.2 GO:0010587 miRNA catabolic process(GO:0010587)
0.0 0.5 GO:0034587 piRNA metabolic process(GO:0034587)
0.0 0.2 GO:0010961 cellular magnesium ion homeostasis(GO:0010961)
0.0 0.1 GO:0042660 positive regulation of cell fate specification(GO:0042660)
0.0 0.1 GO:1904562 phosphatidylinositol 5-phosphate metabolic process(GO:1904562)
0.0 0.1 GO:0021592 fourth ventricle development(GO:0021592)
0.0 0.0 GO:1902594 viral penetration into host nucleus(GO:0075732) multi-organism nuclear import(GO:1902594)
0.0 0.0 GO:0043490 malate-aspartate shuttle(GO:0043490)
0.0 0.1 GO:0045925 positive regulation of female receptivity(GO:0045925)
0.0 0.2 GO:0070934 CRD-mediated mRNA stabilization(GO:0070934)
0.0 0.4 GO:0048935 peripheral nervous system neuron differentiation(GO:0048934) peripheral nervous system neuron development(GO:0048935)
0.0 0.2 GO:1904996 PML body organization(GO:0030578) positive regulation of leukocyte adhesion to vascular endothelial cell(GO:1904996)
0.0 0.1 GO:0060574 intestinal epithelial cell maturation(GO:0060574)
0.0 0.2 GO:0046007 negative regulation of activated T cell proliferation(GO:0046007)
0.0 0.1 GO:1902897 regulation of postsynaptic density protein 95 clustering(GO:1902897)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.5 GO:0071547 piP-body(GO:0071547)
0.0 0.1 GO:0070557 PCNA-p21 complex(GO:0070557)
0.0 0.1 GO:0097513 myosin II filament(GO:0097513)
0.0 0.2 GO:0071204 histone pre-mRNA 3'end processing complex(GO:0071204)
0.0 0.1 GO:1990851 Wnt-Frizzled-LRP5/6 complex(GO:1990851)
0.0 0.1 GO:0044308 axonal spine(GO:0044308)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.3 GO:0035575 histone demethylase activity (H4-K20 specific)(GO:0035575)
0.0 0.1 GO:0099609 microtubule lateral binding(GO:0099609)
0.0 0.3 GO:0005499 vitamin D binding(GO:0005499)
0.0 0.3 GO:0031849 olfactory receptor binding(GO:0031849)
0.0 0.1 GO:0019912 cyclin-dependent protein kinase activating kinase activity(GO:0019912)
0.0 0.5 GO:0042813 Wnt-activated receptor activity(GO:0042813)
0.0 0.6 GO:0070742 C2H2 zinc finger domain binding(GO:0070742)