Illumina Body Map 2 (GSE30611)
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
VAX1 | hg38_v1_chr10_-_117138264_117138275 | 0.08 | 6.8e-01 | Click! |
GSX2 | hg38_v1_chr4_+_54100161_54100173 | 0.05 | 7.8e-01 | Click! |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.5 | 11.3 | GO:0019371 | cyclooxygenase pathway(GO:0019371) |
0.0 | 5.4 | GO:0016266 | O-glycan processing(GO:0016266) |
0.5 | 4.8 | GO:0060087 | relaxation of vascular smooth muscle(GO:0060087) |
0.1 | 3.5 | GO:0072643 | interferon-gamma secretion(GO:0072643) |
0.3 | 3.0 | GO:0060665 | regulation of branching involved in salivary gland morphogenesis by mesenchymal-epithelial signaling(GO:0060665) |
0.4 | 2.7 | GO:1903435 | positive regulation of constitutive secretory pathway(GO:1903435) |
0.4 | 2.7 | GO:0001920 | negative regulation of receptor recycling(GO:0001920) |
0.6 | 2.3 | GO:0061357 | positive regulation of Wnt protein secretion(GO:0061357) |
0.1 | 2.3 | GO:0032463 | negative regulation of protein homooligomerization(GO:0032463) |
0.5 | 1.8 | GO:0002337 | B-1a B cell differentiation(GO:0002337) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 10.9 | GO:0001750 | photoreceptor outer segment(GO:0001750) |
0.0 | 7.2 | GO:0005796 | Golgi lumen(GO:0005796) |
0.0 | 6.5 | GO:0009898 | cytoplasmic side of plasma membrane(GO:0009898) |
0.0 | 3.6 | GO:0031093 | platelet alpha granule lumen(GO:0031093) |
0.1 | 2.7 | GO:0042101 | T cell receptor complex(GO:0042101) |
0.1 | 2.6 | GO:0033093 | Weibel-Palade body(GO:0033093) |
0.1 | 2.3 | GO:0016327 | apicolateral plasma membrane(GO:0016327) |
0.0 | 2.3 | GO:0032590 | dendrite membrane(GO:0032590) dendrite cytoplasm(GO:0032839) |
0.0 | 1.3 | GO:0016328 | lateral plasma membrane(GO:0016328) |
0.1 | 1.0 | GO:0000347 | THO complex(GO:0000347) THO complex part of transcription export complex(GO:0000445) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
2.3 | 11.3 | GO:0004666 | prostaglandin-endoperoxide synthase activity(GO:0004666) |
0.1 | 4.8 | GO:0001965 | G-protein alpha-subunit binding(GO:0001965) |
0.1 | 4.5 | GO:0017147 | Wnt-protein binding(GO:0017147) |
0.1 | 3.3 | GO:0042056 | chemoattractant activity(GO:0042056) |
0.0 | 3.1 | GO:0001078 | transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding(GO:0001078) |
0.1 | 2.7 | GO:0005068 | transmembrane receptor protein tyrosine kinase adaptor activity(GO:0005068) |
0.1 | 2.7 | GO:0031489 | myosin V binding(GO:0031489) |
0.0 | 2.7 | GO:0050840 | extracellular matrix binding(GO:0050840) |
0.0 | 2.3 | GO:0017075 | syntaxin-1 binding(GO:0017075) |
0.0 | 1.6 | GO:0008329 | signaling pattern recognition receptor activity(GO:0008329) pattern recognition receptor activity(GO:0038187) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 8.8 | NABA ECM AFFILIATED | Genes encoding proteins affiliated structurally or functionally to extracellular matrix proteins |
0.0 | 3.7 | PID UPA UPAR PATHWAY | Urokinase-type plasminogen activator (uPA) and uPAR-mediated signaling |
0.0 | 2.3 | PID IFNG PATHWAY | IFN-gamma pathway |
0.0 | 1.9 | PID INTEGRIN3 PATHWAY | Beta3 integrin cell surface interactions |
0.0 | 1.6 | NABA PROTEOGLYCANS | Genes encoding proteoglycans |
0.0 | 1.6 | PID IL2 STAT5 PATHWAY | IL2 signaling events mediated by STAT5 |
0.0 | 1.4 | PID RAC1 PATHWAY | RAC1 signaling pathway |
0.0 | 1.2 | PID ENDOTHELIN PATHWAY | Endothelins |
0.0 | 1.1 | PID S1P S1P4 PATHWAY | S1P4 pathway |
0.0 | 1.1 | ST WNT BETA CATENIN PATHWAY | Wnt/beta-catenin Pathway |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 8.2 | REACTOME PHASE1 FUNCTIONALIZATION OF COMPOUNDS | Genes involved in Phase 1 - Functionalization of compounds |
0.1 | 5.4 | REACTOME TERMINATION OF O GLYCAN BIOSYNTHESIS | Genes involved in Termination of O-glycan biosynthesis |
0.0 | 5.4 | REACTOME G ALPHA Q SIGNALLING EVENTS | Genes involved in G alpha (q) signalling events |
0.1 | 3.0 | REACTOME IL 7 SIGNALING | Genes involved in Interleukin-7 signaling |
0.1 | 2.7 | REACTOME INSULIN SYNTHESIS AND PROCESSING | Genes involved in Insulin Synthesis and Processing |
0.0 | 2.7 | REACTOME DOWNSTREAM TCR SIGNALING | Genes involved in Downstream TCR signaling |
0.1 | 2.3 | REACTOME ROLE OF DCC IN REGULATING APOPTOSIS | Genes involved in Role of DCC in regulating apoptosis |
0.0 | 2.3 | REACTOME TIGHT JUNCTION INTERACTIONS | Genes involved in Tight junction interactions |
0.1 | 1.6 | REACTOME KERATAN SULFATE DEGRADATION | Genes involved in Keratan sulfate degradation |
0.1 | 1.5 | REACTOME REVERSIBLE HYDRATION OF CARBON DIOXIDE | Genes involved in Reversible Hydration of Carbon Dioxide |