Illumina Body Map 2 (GSE30611)
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
VSX1 | hg38_v1_chr20_-_25082131_25082141 | -0.36 | 4.1e-02 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr19_-_2256406 Show fit | 2.67 |
ENST00000300961.10
|
junctional sarcoplasmic reticulum protein 1 |
|
chr2_-_178807415 Show fit | 2.43 |
ENST00000342992.10
ENST00000460472.6 ENST00000589042.5 ENST00000591111.5 ENST00000360870.10 |
titin |
|
chr11_-_13495984 Show fit | 2.18 |
ENST00000282091.6
|
parathyroid hormone |
|
chr11_-_13496018 Show fit | 1.92 |
ENST00000529816.1
|
parathyroid hormone |
|
chr10_-_114632011 Show fit | 1.85 |
ENST00000651023.1
|
actin binding LIM protein 1 |
|
chr5_+_54455661 Show fit | 1.82 |
ENST00000302005.3
|
heat shock protein family B (small) member 3 |
|
chr4_-_137532452 Show fit | 1.74 |
ENST00000412923.6
ENST00000511115.5 ENST00000344876.9 ENST00000507846.5 ENST00000510305.5 ENST00000611581.1 |
protocadherin 18 |
|
chr14_-_106038355 Show fit | 1.74 |
ENST00000390597.3
|
immunoglobulin heavy variable 2-5 |
|
chr6_+_117265550 Show fit | 1.73 |
ENST00000352536.7
ENST00000326274.6 |
vestigial like family member 2 |
|
chr14_-_52069228 Show fit | 1.70 |
ENST00000617139.4
|
nidogen 2 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.8 | 4.1 | GO:0090290 | positive regulation of osteoclast proliferation(GO:0090290) |
0.1 | 3.4 | GO:0007176 | regulation of epidermal growth factor-activated receptor activity(GO:0007176) |
0.1 | 3.4 | GO:0071711 | basement membrane organization(GO:0071711) |
0.1 | 3.3 | GO:0007175 | negative regulation of epidermal growth factor-activated receptor activity(GO:0007175) |
0.6 | 2.8 | GO:0016480 | negative regulation of transcription from RNA polymerase III promoter(GO:0016480) |
0.0 | 2.7 | GO:0060314 | regulation of ryanodine-sensitive calcium-release channel activity(GO:0060314) |
0.7 | 2.6 | GO:0070434 | positive regulation of nucleotide-binding oligomerization domain containing signaling pathway(GO:0070426) positive regulation of nucleotide-binding oligomerization domain containing 2 signaling pathway(GO:0070434) |
0.3 | 2.4 | GO:0030241 | skeletal muscle myosin thick filament assembly(GO:0030241) |
0.3 | 2.3 | GO:1902261 | positive regulation of delayed rectifier potassium channel activity(GO:1902261) |
0.0 | 2.3 | GO:0006120 | mitochondrial electron transport, NADH to ubiquinone(GO:0006120) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 4.3 | GO:0042641 | actomyosin(GO:0042641) |
0.5 | 4.2 | GO:0070435 | Shc-EGFR complex(GO:0070435) |
0.0 | 3.9 | GO:0005604 | basement membrane(GO:0005604) |
0.0 | 2.7 | GO:0033017 | sarcoplasmic reticulum membrane(GO:0033017) |
0.1 | 2.6 | GO:0060077 | inhibitory synapse(GO:0060077) |
0.0 | 2.6 | GO:0016235 | aggresome(GO:0016235) |
0.0 | 2.4 | GO:0005859 | muscle myosin complex(GO:0005859) |
0.1 | 2.3 | GO:0014701 | junctional sarcoplasmic reticulum membrane(GO:0014701) |
0.0 | 2.3 | GO:0045271 | mitochondrial respiratory chain complex I(GO:0005747) NADH dehydrogenase complex(GO:0030964) respiratory chain complex I(GO:0045271) |
0.1 | 2.1 | GO:0034709 | methylosome(GO:0034709) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 6.2 | GO:0005518 | collagen binding(GO:0005518) |
0.4 | 4.2 | GO:0048408 | epidermal growth factor binding(GO:0048408) |
0.1 | 4.1 | GO:0048018 | receptor agonist activity(GO:0048018) |
0.0 | 3.3 | GO:0001784 | phosphotyrosine binding(GO:0001784) |
0.0 | 2.9 | GO:0003954 | NADH dehydrogenase activity(GO:0003954) |
0.9 | 2.8 | GO:0000994 | RNA polymerase III core binding(GO:0000994) |
0.3 | 2.8 | GO:0055131 | C3HC4-type RING finger domain binding(GO:0055131) |
0.9 | 2.7 | GO:0004108 | citrate (Si)-synthase activity(GO:0004108) citrate synthase activity(GO:0036440) |
0.1 | 2.7 | GO:0004003 | ATP-dependent DNA helicase activity(GO:0004003) |
0.0 | 2.6 | GO:0070888 | E-box binding(GO:0070888) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 4.3 | NABA BASEMENT MEMBRANES | Genes encoding structural components of basement membranes |
0.1 | 3.7 | SA TRKA RECEPTOR | The TrkA receptor binds nerve growth factor to activate MAP kinase pathways and promote cell growth. |
0.0 | 3.3 | PID CD40 PATHWAY | CD40/CD40L signaling |
0.0 | 2.7 | PID ATR PATHWAY | ATR signaling pathway |
0.0 | 2.6 | PID SYNDECAN 4 PATHWAY | Syndecan-4-mediated signaling events |
0.1 | 2.2 | PID CIRCADIAN PATHWAY | Circadian rhythm pathway |
0.1 | 2.0 | PID ARF 3PATHWAY | Arf1 pathway |
0.1 | 1.9 | PID RANBP2 PATHWAY | Sumoylation by RanBP2 regulates transcriptional repression |
0.0 | 1.9 | NABA COLLAGENS | Genes encoding collagen proteins |
0.0 | 1.5 | PID PTP1B PATHWAY | Signaling events mediated by PTP1B |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 5.4 | REACTOME SIGNAL ATTENUATION | Genes involved in Signal attenuation |
0.0 | 3.4 | REACTOME CLASS B 2 SECRETIN FAMILY RECEPTORS | Genes involved in Class B/2 (Secretin family receptors) |
0.1 | 3.3 | REACTOME ANTIGEN ACTIVATES B CELL RECEPTOR LEADING TO GENERATION OF SECOND MESSENGERS | Genes involved in Antigen Activates B Cell Receptor Leading to Generation of Second Messengers |
0.1 | 2.9 | REACTOME CITRIC ACID CYCLE TCA CYCLE | Genes involved in Citric acid cycle (TCA cycle) |
0.0 | 2.6 | REACTOME COLLAGEN FORMATION | Genes involved in Collagen formation |
0.0 | 2.3 | REACTOME MRNA SPLICING | Genes involved in mRNA Splicing |
0.0 | 2.2 | REACTOME TRANSPORT OF INORGANIC CATIONS ANIONS AND AMINO ACIDS OLIGOPEPTIDES | Genes involved in Transport of inorganic cations/anions and amino acids/oligopeptides |
0.0 | 2.1 | REACTOME GLUTATHIONE CONJUGATION | Genes involved in Glutathione conjugation |
0.0 | 1.9 | REACTOME NOTCH1 INTRACELLULAR DOMAIN REGULATES TRANSCRIPTION | Genes involved in NOTCH1 Intracellular Domain Regulates Transcription |
0.1 | 1.5 | REACTOME UNWINDING OF DNA | Genes involved in Unwinding of DNA |