Illumina Body Map 2 (GSE30611)
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
XBP1 | hg38_v1_chr22_-_28800558_28800597 | 0.52 | 2.5e-03 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr7_+_94394886 Show fit | 14.47 |
ENST00000297268.11
ENST00000620463.1 |
collagen type I alpha 2 chain |
|
chr22_+_38468036 Show fit | 5.59 |
ENST00000409006.3
ENST00000216014.9 |
KDEL endoplasmic reticulum protein retention receptor 3 |
|
chr19_+_49527988 Show fit | 5.51 |
ENST00000270645.8
|
reticulocalbin 3 |
|
chr5_-_122078249 Show fit | 5.49 |
ENST00000231004.5
|
lysyl oxidase |
|
chr7_-_27143672 Show fit | 4.60 |
ENST00000222726.4
|
homeobox A5 |
|
chr10_+_87659839 Show fit | 4.50 |
ENST00000456849.2
|
3'-phosphoadenosine 5'-phosphosulfate synthase 2 |
|
chr20_-_17682060 Show fit | 4.36 |
ENST00000455029.3
|
ribosome binding protein 1 |
|
chr14_-_105987068 Show fit | 3.47 |
ENST00000390594.3
|
immunoglobulin heavy variable 1-2 |
|
chr4_+_8269744 Show fit | 3.34 |
ENST00000307358.7
ENST00000382512.3 |
HtrA serine peptidase 3 |
|
chr3_-_57597325 Show fit | 3.11 |
ENST00000496292.5
ENST00000489843.1 ENST00000303436.11 |
ADP ribosylation factor 4 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
1.0 | 16.4 | GO:0043589 | skin morphogenesis(GO:0043589) |
0.2 | 9.1 | GO:0006882 | cellular zinc ion homeostasis(GO:0006882) |
0.0 | 7.7 | GO:0001649 | osteoblast differentiation(GO:0001649) |
0.6 | 7.1 | GO:0006621 | protein retention in ER lumen(GO:0006621) |
0.3 | 6.1 | GO:0006048 | UDP-N-acetylglucosamine biosynthetic process(GO:0006048) |
0.0 | 6.0 | GO:0006890 | retrograde vesicle-mediated transport, Golgi to ER(GO:0006890) |
0.4 | 5.8 | GO:0031584 | activation of phospholipase D activity(GO:0031584) |
0.0 | 5.7 | GO:0036498 | IRE1-mediated unfolded protein response(GO:0036498) |
0.4 | 5.5 | GO:0048251 | elastic fiber assembly(GO:0048251) |
0.0 | 5.3 | GO:0030449 | regulation of complement activation(GO:0030449) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 19.2 | GO:0005789 | endoplasmic reticulum membrane(GO:0005789) |
0.0 | 16.1 | GO:0005788 | endoplasmic reticulum lumen(GO:0005788) |
4.8 | 14.5 | GO:0005584 | collagen type I trimer(GO:0005584) |
0.0 | 9.9 | GO:0030176 | integral component of endoplasmic reticulum membrane(GO:0030176) |
0.0 | 9.5 | GO:0005793 | endoplasmic reticulum-Golgi intermediate compartment(GO:0005793) |
0.0 | 7.6 | GO:0005581 | collagen trimer(GO:0005581) |
0.0 | 5.9 | GO:0032587 | ruffle membrane(GO:0032587) |
0.8 | 5.8 | GO:0071256 | Sec61 translocon complex(GO:0005784) translocon complex(GO:0071256) |
0.3 | 5.7 | GO:0030127 | COPII vesicle coat(GO:0030127) |
0.2 | 3.7 | GO:0030126 | COPI vesicle coat(GO:0030126) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.7 | 14.5 | GO:0048407 | platelet-derived growth factor binding(GO:0048407) |
0.2 | 10.8 | GO:0005385 | zinc ion transmembrane transporter activity(GO:0005385) |
0.7 | 7.1 | GO:0046923 | ER retention sequence binding(GO:0046923) |
0.1 | 6.5 | GO:0005086 | ARF guanyl-nucleotide exchange factor activity(GO:0005086) |
0.0 | 5.6 | GO:0003823 | antigen binding(GO:0003823) |
0.5 | 5.5 | GO:0004720 | protein-lysine 6-oxidase activity(GO:0004720) |
0.0 | 4.7 | GO:0017124 | SH3 domain binding(GO:0017124) |
1.1 | 4.5 | GO:0004360 | glutamine-fructose-6-phosphate transaminase (isomerizing) activity(GO:0004360) |
0.0 | 4.3 | GO:0051087 | chaperone binding(GO:0051087) |
0.1 | 4.2 | GO:0070566 | adenylyltransferase activity(GO:0070566) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 14.5 | PID LYMPH ANGIOGENESIS PATHWAY | VEGFR3 signaling in lymphatic endothelium |
0.0 | 10.2 | NABA ECM REGULATORS | Genes encoding enzymes and their regulators involved in the remodeling of the extracellular matrix |
0.0 | 4.9 | NABA ECM AFFILIATED | Genes encoding proteins affiliated structurally or functionally to extracellular matrix proteins |
0.0 | 4.4 | PID ERBB1 DOWNSTREAM PATHWAY | ErbB1 downstream signaling |
0.0 | 2.1 | PID WNT NONCANONICAL PATHWAY | Noncanonical Wnt signaling pathway |
0.0 | 1.7 | PID NCADHERIN PATHWAY | N-cadherin signaling events |
0.1 | 1.3 | SA G2 AND M PHASES | Cdc25 activates the cdc2/cyclin B complex to induce the G2/M transition. |
0.0 | 1.2 | PID HEDGEHOG 2PATHWAY | Signaling events mediated by the Hedgehog family |
0.0 | 0.8 | PID KIT PATHWAY | Signaling events mediated by Stem cell factor receptor (c-Kit) |
0.0 | 0.7 | PID CD40 PATHWAY | CD40/CD40L signaling |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.7 | 14.5 | REACTOME PLATELET ADHESION TO EXPOSED COLLAGEN | Genes involved in Platelet Adhesion to exposed collagen |
0.1 | 12.0 | REACTOME ACTIVATION OF CHAPERONE GENES BY XBP1S | Genes involved in Activation of Chaperone Genes by XBP1(S) |
0.1 | 10.3 | REACTOME SRP DEPENDENT COTRANSLATIONAL PROTEIN TARGETING TO MEMBRANE | Genes involved in SRP-dependent cotranslational protein targeting to membrane |
0.3 | 9.9 | REACTOME ZINC TRANSPORTERS | Genes involved in Zinc transporters |
0.2 | 4.8 | REACTOME ANTIGEN PRESENTATION FOLDING ASSEMBLY AND PEPTIDE LOADING OF CLASS I MHC | Genes involved in Antigen Presentation: Folding, assembly and peptide loading of class I MHC |
0.2 | 4.5 | REACTOME CYTOSOLIC SULFONATION OF SMALL MOLECULES | Genes involved in Cytosolic sulfonation of small molecules |
0.1 | 3.6 | REACTOME BIOSYNTHESIS OF THE N GLYCAN PRECURSOR DOLICHOL LIPID LINKED OLIGOSACCHARIDE LLO AND TRANSFER TO A NASCENT PROTEIN | Genes involved in Biosynthesis of the N-glycan precursor (dolichol lipid-linked oligosaccharide, LLO) and transfer to a nascent protein |
0.1 | 3.3 | REACTOME EFFECTS OF PIP2 HYDROLYSIS | Genes involved in Effects of PIP2 hydrolysis |
0.1 | 3.2 | REACTOME SMOOTH MUSCLE CONTRACTION | Genes involved in Smooth Muscle Contraction |
0.0 | 2.4 | REACTOME COLLAGEN FORMATION | Genes involved in Collagen formation |