hg38_v1_chr2_-_85668172_85668208	6.90795	GLI3	ENST00000428225.5|SFTPB|ENSG00000168878.19|surfactant protein B	ENST00000519937.7|SFTPB|ENSG00000168878.19|surfactant protein B
hg38_v1_chr15_+_81299416_81299439	4.22649	GLI3	ENST00000558332.3|IL16|ENSG00000172349.18|interleukin 16
hg38_v1_chr14_-_106557465_106557481	3.39397	GLI3	ENST00000390625.3|IGHV3-49|ENSG00000211965.4|immunoglobulin heavy variable 3-49
hg38_v1_chr2_-_136118142_136118155	3.37888	GLI3	ENST00000241393.4|CXCR4|ENSG00000121966.7|C-X-C motif chemokine receptor 4
hg38_v1_chr14_-_106335613_106335613	3.28117	GLI3	ENST00000603660.1|IGHV3-30|ENSG00000270550.1|immunoglobulin heavy variable 3-30
hg38_v1_chr22_+_22409755_22409771	3.27933	GLI3	ENST00000390299.2|IGLV1-40|ENSG00000211653.2|immunoglobulin lambda variable 1-40
hg38_v1_chr14_-_106627685_106627825	3.10877	GLI3	ENST00000390629.3|IGHV4-59|ENSG00000224373.3|immunoglobulin heavy variable 4-59
hg38_v1_chr19_+_44914588_44914613	3.01744	GLI3	ENST00000592535.6|APOC1|ENSG00000130208.10|apolipoprotein C1
hg38_v1_chr19_+_18173148_18173183	3.00222	GLI3	ENST00000597802.2|IFI30|ENSG00000216490.4|IFI30 lysosomal thiol reductase
hg38_v1_chr3_+_32951636_32951652	2.98667	GLI3	ENST00000330953.6|CCR4|ENSG00000183813.7|C-C motif chemokine receptor 4
hg38_v1_chr6_-_132763424_132763466	2.95993	GLI3	ENST00000532012.1|VNN2|ENSG00000112303.14|vanin 2	ENST00000525270.5|VNN2|ENSG00000112303.14|vanin 2	ENST00000530536.5|VNN2|ENSG00000112303.14|vanin 2	ENST00000524919.5|VNN2|ENSG00000112303.14|vanin 2
hg38_v1_chr19_+_44914702_44914713	2.91653	GLI3	ENST00000592885.5|APOC1|ENSG00000130208.10|apolipoprotein C1	ENST00000589781.1|APOC1|ENSG00000130208.10|apolipoprotein C1
hg38_v1_chr5_-_180591488_180591505	2.81191	GLI3	ENST00000292641.4|SCGB3A1|ENSG00000161055.4|secretoglobin family 3A member 1
hg38_v1_chr21_-_44910630_44910826	2.69982	GLI3	ENST00000320216.10|ITGB2|ENSG00000160255.18|integrin subunit beta 2	ENST00000397852.5|ITGB2|ENSG00000160255.18|integrin subunit beta 2
hg38_v1_chr14_-_106639589_106639657	2.61249	GLI3	ENST00000390630.3|IGHV4-61|ENSG00000211970.3|immunoglobulin heavy variable 4-61
hg38_v1_chr14_-_106374129_106374145	2.60134	GLI3	ENST00000390616.2|IGHV4-34|ENSG00000211956.2|immunoglobulin heavy variable 4-34
hg38_v1_chr19_+_44914833_44914872	2.55234	GLI3	ENST00000589078.1|APOC1|ENSG00000130208.10|apolipoprotein C1	ENST00000586638.5|APOC1|ENSG00000130208.10|apolipoprotein C1
hg38_v1_chr1_-_161021096_161021159	2.38678	GLI3	ENST00000537746.1|F11R|ENSG00000158769.18|F11 receptor	ENST00000368026.11|F11R|ENSG00000158769.18|F11 receptor
hg38_v1_chr8_-_6938301_6938321	2.36621	GLI3	ENST00000297435.3|DEFA4|ENSG00000164821.5|defensin alpha 4
hg38_v1_chr22_-_50532137_50532216	2.33346	GLI3	ENST00000405135.5|ODF3B|ENSG00000177989.14|outer dense fiber of sperm tails 3B	ENST00000401779.5|ODF3B|ENSG00000177989.14|outer dense fiber of sperm tails 3B	ENST00000682240.1|ODF3B|ENSG00000177989.14|outer dense fiber of sperm tails 3B
hg38_v1_chr14_-_106108453_106108470	2.29187	GLI3	ENST00000632950.2|IGHV5-10-1|ENSG00000282651.2|immunoglobulin heavy variable 5-10-1
hg38_v1_chr14_-_106360320_106360324	2.28336	GLI3	ENST00000390615.2|IGHV3-33|ENSG00000211955.2|immunoglobulin heavy variable 3-33
hg38_v1_chr2_-_85663393_85663478	2.24853	GLI3	ENST00000494165.1|SFTPB|ENSG00000168878.19|surfactant protein B
hg38_v1_chr16_-_85112390_85112484	2.19538	GLI3	ENST00000629253.1|CIBAR2|ENSG00000153789.13|CBY1 interacting BAR domain containing 2	ENST00000539556.6|CIBAR2|ENSG00000153789.13|CBY1 interacting BAR domain containing 2
hg38_v1_chr19_+_44914247_44914332	2.16282	GLI3	ENST00000588750.5|APOC1|ENSG00000130208.10|apolipoprotein C1	ENST00000588802.5|APOC1|ENSG00000130208.10|apolipoprotein C1
hg38_v1_chr12_-_10390023_10390048	2.14171	GLI3	ENST00000240618.11|KLRK1|ENSG00000213809.9|killer cell lectin like receptor K1
hg38_v1_chr14_-_106324743_106324760	2.05078	GLI3	ENST00000390612.3|IGHV4-28|ENSG00000211952.3|immunoglobulin heavy variable 4-28
hg38_v1_chr22_-_19524400_19524416	2.03021	GLI3	ENST00000618236.2|CLDN5|ENSG00000184113.10|claudin 5
hg38_v1_chr8_-_6999198_6999198	2.02748	GLI3	ENST00000382689.8|DEFA1B|ENSG00000240247.8|defensin alpha 1B
hg38_v1_chr19_-_54280498_54280575	2.02217	GLI3	ENST00000391746.5|LILRB2|ENSG00000131042.15|leukocyte immunoglobulin like receptor B2
hg38_v1_chr12_-_44876294_44876363	1.9972	GLI3	ENST00000429094.7|NELL2|ENSG00000184613.11|neural EGFL like 2	ENST00000551601.5|NELL2|ENSG00000184613.11|neural EGFL like 2	ENST00000549027.5|NELL2|ENSG00000184613.11|neural EGFL like 2	ENST00000452445.6|NELL2|ENSG00000184613.11|neural EGFL like 2
hg38_v1_chr14_-_106593319_106593347	1.97234	GLI3	ENST00000390627.3|IGHV3-53|ENSG00000211967.3|immunoglobulin heavy variable 3-53
hg38_v1_chr14_-_106154113_106154163	1.92359	GLI3	ENST00000390603.2|IGHV3-15|ENSG00000211943.2|immunoglobulin heavy variable 3-15
hg38_v1_chr12_-_11310420_11310438	1.92046	GLI3	ENST00000621732.4|PRB4|ENSG00000230657.8|proline rich protein BstNI subfamily 4	ENST00000445719.2|PRB4|ENSG00000230657.8|proline rich protein BstNI subfamily 4	ENST00000279575.7|PRB4|ENSG00000230657.8|proline rich protein BstNI subfamily 4
hg38_v1_chr16_+_57668299_57668321	1.88691	GLI3	ENST00000333493.9|ADGRG3|ENSG00000182885.17|adhesion G protein-coupled receptor G3	ENST00000450388.7|ADGRG3|ENSG00000182885.17|adhesion G protein-coupled receptor G3
hg38_v1_chr6_-_46735351_46735409	1.84971	GLI3	ENST00000274793.12|PLA2G7|ENSG00000146070.17|phospholipase A2 group VII
hg38_v1_chr19_+_54630960_54631074	1.84198	GLI3	ENST00000396317.5|LILRB1|ENSG00000104972.16|leukocyte immunoglobulin like receptor B1	ENST00000396315.5|LILRB1|ENSG00000104972.16|leukocyte immunoglobulin like receptor B1
hg38_v1_chr8_-_81112055_81112076	1.80742	GLI3	ENST00000220597.4|PAG1|ENSG00000076641.4|phosphoprotein membrane anchor with glycosphingolipid microdomains 1
hg38_v1_chr19_-_54222978_54223087	1.74687	GLI3	ENST00000245620.13|LILRB3|ENSG00000204577.11|leukocyte immunoglobulin like receptor B3	ENST00000346401.10|LILRB3|ENSG00000204577.11|leukocyte immunoglobulin like receptor B3	ENST00000445347.1|LILRB3|ENSG00000204577.11|leukocyte immunoglobulin like receptor B3
hg38_v1_chr19_+_18173804_18173829	1.73745	GLI3	ENST00000407280.4|IFI30|ENSG00000216490.4|IFI30 lysosomal thiol reductase
hg38_v1_chr1_-_21279520_21279570	1.73271	GLI3	ENST00000357071.8|ECE1|ENSG00000117298.16|endothelin converting enzyme 1
hg38_v1_chr22_+_22904850_22904881	1.73234	GLI3	ENST00000390324.2|IGLJ3|ENSG00000211678.2|immunoglobulin lambda joining 3
hg38_v1_chr21_-_44928824_44928873	1.72346	GLI3	ENST00000355153.8|ITGB2|ENSG00000160255.18|integrin subunit beta 2	ENST00000397850.6|ITGB2|ENSG00000160255.18|integrin subunit beta 2
hg38_v1_chr22_+_22887780_22887844	1.67748	GLI3	ENST00000532223.2|IGLL5|ENSG00000254709.8|immunoglobulin lambda like polypeptide 5	ENST00000526893.6|IGLL5|ENSG00000254709.8|immunoglobulin lambda like polypeptide 5	ENST00000531372.1|IGLL5|ENSG00000254709.8|immunoglobulin lambda like polypeptide 5
hg38_v1_chr16_+_30182969_30182987	1.63587	GLI3	ENST00000561815.5|CORO1A|ENSG00000102879.16|coronin 1A
hg38_v1_chr6_-_46735693_46735727	1.61525	GLI3	ENST00000537365.1|PLA2G7|ENSG00000146070.17|phospholipase A2 group VII
hg38_v1_chr14_-_106301848_106301862	1.60971	GLI3	ENST00000390611.2|IGHV2-26|ENSG00000211951.2|immunoglobulin heavy variable 2-26
hg38_v1_chr16_+_165966_165985	1.60117	GLI3	ENST00000356815.4|HBM|ENSG00000206177.7|hemoglobin subunit mu
hg38_v1_chr22_+_22322452_22322472	1.59078	GLI3	ENST00000390290.3|IGLV1-51|ENSG00000211644.3|immunoglobulin lambda variable 1-51
hg38_v1_chr2_-_86861871_86861924	1.58689	GLI3	ENST00000390655.12|CD8B|ENSG00000172116.23|CD8b molecule	ENST00000393759.6|CD8B|ENSG00000172116.23|CD8b molecule	ENST00000349455.7|CD8B|ENSG00000172116.23|CD8b molecule	ENST00000331469.6|CD8B|ENSG00000172116.23|CD8b molecule	ENST00000393761.6|CD8B|ENSG00000172116.23|CD8b molecule	ENST00000431506.3|CD8B|ENSG00000172116.23|CD8b molecule
hg38_v1_chr14_-_94390614_94390647	1.57546	GLI3	ENST00000553327.5|SERPINA1|ENSG00000197249.14|serpin family A member 1	ENST00000556955.5|SERPINA1|ENSG00000197249.14|serpin family A member 1	ENST00000557118.5|SERPINA1|ENSG00000197249.14|serpin family A member 1	ENST00000440909.5|SERPINA1|ENSG00000197249.14|serpin family A member 1
hg38_v1_chr16_+_28984795_28984845	1.57115	GLI3	ENST00000395461.7|LAT|ENSG00000213658.12|linker for activation of T cells
hg38_v1_chr14_-_94390667_94390693	1.56232	GLI3	ENST00000557492.5|SERPINA1|ENSG00000197249.14|serpin family A member 1	ENST00000355814.8|SERPINA1|ENSG00000197249.14|serpin family A member 1	ENST00000437397.5|SERPINA1|ENSG00000197249.14|serpin family A member 1	ENST00000448921.5|SERPINA1|ENSG00000197249.14|serpin family A member 1	ENST00000393088.8|SERPINA1|ENSG00000197249.14|serpin family A member 1
hg38_v1_chr22_+_22098683_22098700	1.55758	GLI3	ENST00000390283.2|IGLV8-61|ENSG00000211638.2|immunoglobulin lambda variable 8-61
hg38_v1_chr1_-_161631032_161631133	1.55512	GLI3	ENST00000534776.1|FCGR3B|ENSG00000162747.12|Fc fragment of IgG receptor IIIb	ENST00000613418.4|FCGR3B|ENSG00000162747.12|Fc fragment of IgG receptor IIIb	ENST00000614870.4|FCGR3B|ENSG00000162747.12|Fc fragment of IgG receptor IIIb
hg38_v1_chr1_-_47231715_47231786	1.55064	GLI3	ENST00000371884.6|TAL1|ENSG00000162367.11|TAL bHLH transcription factor 1, erythroid differentiation factor
hg38_v1_chr22_-_41926791_41926817	1.51895	GLI3	ENST00000291232.5|TNFRSF13C|ENSG00000159958.7|TNF receptor superfamily member 13C
hg38_v1_chr20_+_46008900_46008914	1.50062	GLI3	ENST00000372330.3|MMP9|ENSG00000100985.7|matrix metallopeptidase 9
hg38_v1_chr14_-_94390650_94390663	1.49293	GLI3	ENST00000449399.7|SERPINA1|ENSG00000197249.14|serpin family A member 1	ENST00000404814.8|SERPINA1|ENSG00000197249.14|serpin family A member 1
hg38_v1_chr1_+_65525641_65525734	1.47293	GLI3	ENST00000344610.12|LEPR|ENSG00000116678.20|leptin receptor	ENST00000616738.4|LEPR|ENSG00000116678.20|leptin receptor
hg38_v1_chr6_-_24910695_24910885	1.47051	GLI3	ENST00000643623.1|RIPOR2|ENSG00000111913.20|RHO family interacting cell polarization regulator 2	ENST00000538035.6|RIPOR2|ENSG00000111913.20|RHO family interacting cell polarization regulator 2	ENST00000647136.1|RIPOR2|ENSG00000111913.20|RHO family interacting cell polarization regulator 2
hg38_v1_chr16_+_85914267_85914313	1.46808	GLI3	ENST00000569607.1|IRF8|ENSG00000140968.11|interferon regulatory factor 8
hg38_v1_chr19_-_41353044_41353100	1.46054	GLI3	ENST00000600196.2|TGFB1|ENSG00000105329.11|transforming growth factor beta 1	ENST00000677934.1|TGFB1|ENSG00000105329.11|transforming growth factor beta 1
hg38_v1_chr16_+_28985043_28985066	1.45034	GLI3	ENST00000395456.7|LAT|ENSG00000213658.12|linker for activation of T cells	ENST00000564277.5|LAT|ENSG00000213658.12|linker for activation of T cells	ENST00000630764.2|LAT|ENSG00000213658.12|linker for activation of T cells	ENST00000354453.7|LAT|ENSG00000213658.12|linker for activation of T cells
hg38_v1_chr1_+_1001002_1001145	1.44844	GLI3	ENST00000624697.4|ISG15|ENSG00000187608.10|ISG15 ubiquitin like modifier	ENST00000624652.1|ISG15|ENSG00000187608.10|ISG15 ubiquitin like modifier
hg38_v1_chr22_+_22375984_22375989	1.44426	GLI3	ENST00000390296.2|IGLV5-45|ENSG00000211650.2|immunoglobulin lambda variable 5-45
hg38_v1_chr22_+_36863091_36863114	1.44364	GLI3	ENST00000650698.1|NCF4|ENSG00000100365.16|neutrophil cytosolic factor 4
hg38_v1_chr6_-_32816910_32817062	1.4218	GLI3	ENST00000447394.1|HLA-DOB|ENSG00000241106.8|major histocompatibility complex, class II, DO beta	ENST00000438763.7|HLA-DOB|ENSG00000241106.8|major histocompatibility complex, class II, DO beta
hg38_v1_chr1_-_161631152_161631184	1.41917	GLI3	ENST00000421702.3|FCGR3B|ENSG00000162747.12|Fc fragment of IgG receptor IIIb	ENST00000650385.1|FCGR3B|ENSG00000162747.12|Fc fragment of IgG receptor IIIb
hg38_v1_chr1_+_17308194_17308201	1.41423	GLI3	ENST00000375453.5|PADI4|ENSG00000159339.13|peptidyl arginine deiminase 4	ENST00000375448.4|PADI4|ENSG00000159339.13|peptidyl arginine deiminase 4
hg38_v1_chr14_-_24634160_24634209	1.40863	GLI3	ENST00000616551.1|GZMB|ENSG00000100453.13|granzyme B	ENST00000382542.5|GZMB|ENSG00000100453.13|granzyme B	ENST00000216341.9|GZMB|ENSG00000100453.13|granzyme B	ENST00000526004.1|GZMB|ENSG00000100453.13|granzyme B	ENST00000415355.7|GZMB|ENSG00000100453.13|granzyme B
hg38_v1_chr16_+_30183595_30183634	1.39291	GLI3	ENST00000219150.10|CORO1A|ENSG00000102879.16|coronin 1A	ENST00000570045.5|CORO1A|ENSG00000102879.16|coronin 1A	ENST00000565497.5|CORO1A|ENSG00000102879.16|coronin 1A	ENST00000570244.5|CORO1A|ENSG00000102879.16|coronin 1A
hg38_v1_chr6_-_30932147_30932181	1.37249	GLI3	ENST00000359086.4|SFTA2|ENSG00000196260.5|surfactant associated 2
hg38_v1_chr6_-_73523757_73523866	1.36619	GLI3	ENST00000455918.2|EEF1A1|ENSG00000156508.19|eukaryotic translation elongation factor 1 alpha 1	ENST00000677236.1|EEF1A1|ENSG00000156508.19|eukaryotic translation elongation factor 1 alpha 1
hg38_v1_chr4_+_2829797_2829953	1.35302	GLI3	ENST00000513069.1|SH3BP2|ENSG00000087266.17|SH3 domain binding protein 2
hg38_v1_chr20_+_63696643_63696660	1.35111	GLI3	ENST00000369996.3|TNFRSF6B|ENSG00000243509.6|TNF receptor superfamily member 6b
hg38_v1_chr17_-_6831716_6831749	1.35105	GLI3	ENST00000338694.7|TEKT1|ENSG00000167858.13|tektin 1
hg38_v1_chr11_-_414948_415047	1.3448	GLI3	ENST00000530494.1|SIGIRR|ENSG00000185187.13|single Ig and TIR domain containing	ENST00000528209.5|SIGIRR|ENSG00000185187.13|single Ig and TIR domain containing	ENST00000528058.1|SIGIRR|ENSG00000185187.13|single Ig and TIR domain containing	ENST00000431843.7|SIGIRR|ENSG00000185187.13|single Ig and TIR domain containing
hg38_v1_chr16_+_30182795_30182827	1.33689	GLI3	ENST00000563778.5|CORO1A|ENSG00000102879.16|coronin 1A
hg38_v1_chr7_+_142626642_142626653	1.33068	GLI3	ENST00000390394.3|TRBV20-1|ENSG00000211747.3|T cell receptor beta variable 20-1
hg38_v1_chr1_+_26543106_26543147	1.32721	GLI3	ENST00000530003.5|RPS6KA1|ENSG00000117676.14|ribosomal protein S6 kinase A1
hg38_v1_chr4_-_5019437_5019472	1.32354	GLI3	ENST00000506508.1|CYTL1|ENSG00000170891.11|cytokine like 1	ENST00000509419.1|CYTL1|ENSG00000170891.11|cytokine like 1	ENST00000307746.9|CYTL1|ENSG00000170891.11|cytokine like 1
hg38_v1_chr6_+_137871208_137871229	1.31394	GLI3	ENST00000614035.4|TNFAIP3|ENSG00000118503.15|TNF alpha induced protein 3	ENST00000621150.3|TNFAIP3|ENSG00000118503.15|TNF alpha induced protein 3	ENST00000619035.4|TNFAIP3|ENSG00000118503.15|TNF alpha induced protein 3	ENST00000615468.4|TNFAIP3|ENSG00000118503.15|TNF alpha induced protein 3	ENST00000620204.3|TNFAIP3|ENSG00000118503.15|TNF alpha induced protein 3
hg38_v1_chr19_+_44748673_44748749	1.30694	GLI3	ENST00000164227.10|BCL3|ENSG00000069399.15|BCL3 transcription coactivator
hg38_v1_chr5_+_157142933_157143020	1.29941	GLI3	ENST00000521769.5|ITK|ENSG00000113263.13|IL2 inducible T cell kinase
hg38_v1_chr19_+_54874218_54874261	1.29175	GLI3	ENST00000355524.8|FCAR|ENSG00000186431.19|Fc fragment of IgA receptor	ENST00000391726.7|FCAR|ENSG00000186431.19|Fc fragment of IgA receptor
hg38_v1_chr3_-_46464868_46464914	1.25427	GLI3	ENST00000417439.5|LTF|ENSG00000012223.13|lactotransferrin	ENST00000231751.9|LTF|ENSG00000012223.13|lactotransferrin	ENST00000431944.1|LTF|ENSG00000012223.13|lactotransferrin
hg38_v1_chr19_+_54874275_54874290	1.25418	GLI3	ENST00000469767.5|FCAR|ENSG00000186431.19|Fc fragment of IgA receptor	ENST00000391725.7|FCAR|ENSG00000186431.19|Fc fragment of IgA receptor	ENST00000345937.8|FCAR|ENSG00000186431.19|Fc fragment of IgA receptor	ENST00000353758.8|FCAR|ENSG00000186431.19|Fc fragment of IgA receptor	ENST00000359272.8|FCAR|ENSG00000186431.19|Fc fragment of IgA receptor	ENST00000391723.7|FCAR|ENSG00000186431.19|Fc fragment of IgA receptor	ENST00000391724.3|FCAR|ENSG00000186431.19|Fc fragment of IgA receptor
hg38_v1_chr16_+_3065348_3065377	1.2395	GLI3	ENST00000529699.5|IL32|ENSG00000008517.19|interleukin 32	ENST00000526464.6|IL32|ENSG00000008517.19|interleukin 32	ENST00000440815.7|IL32|ENSG00000008517.19|interleukin 32	ENST00000529550.5|IL32|ENSG00000008517.19|interleukin 32
hg38_v1_chr12_-_57488726_57488838	1.23662	GLI3	ENST00000550288.6|ARHGAP9|ENSG00000123329.20|Rho GTPase activating protein 9	ENST00000393797.7|ARHGAP9|ENSG00000123329.20|Rho GTPase activating protein 9
hg38_v1_chrX_-_1537165_1537192	1.22225	GLI3	ENST00000381297.10|P2RY8|ENSG00000182162.11|P2Y receptor family member 8
hg38_v1_chrX_-_102516714_102516786	1.21762	GLI3	ENST00000289373.5|TMSB15A|ENSG00000158164.7|thymosin beta 15A
hg38_v1_chr19_-_19643597_19643663	1.21484	GLI3	ENST00000587205.1|GMIP|ENSG00000089639.11|GEM interacting protein	ENST00000203556.9|GMIP|ENSG00000089639.11|GEM interacting protein
hg38_v1_chr16_+_2830155_2830177	1.2141	GLI3	ENST00000382280.7|ZG16B|ENSG00000162078.11|zymogen granule protein 16B
hg38_v1_chr11_+_1868673_1868724	1.21343	GLI3	ENST00000405957.6|LSP1|ENSG00000130592.17|lymphocyte specific protein 1
hg38_v1_chrX_-_47629845_47629965	1.20934	GLI3	ENST00000469388.1|CFP|ENSG00000126759.14|complement factor properdin	ENST00000396992.8|CFP|ENSG00000126759.14|complement factor properdin	ENST00000377005.6|CFP|ENSG00000126759.14|complement factor properdin
hg38_v1_chr7_+_142615710_142615765	1.20369	GLI3	ENST00000611520.1|TRBV18|ENSG00000276557.1|T cell receptor beta variable 18
hg38_v1_chr22_-_50532077_50532132	1.19282	GLI3	ENST00000428989.3|ODF3B|ENSG00000177989.14|outer dense fiber of sperm tails 3B	ENST00000403326.5|ODF3B|ENSG00000177989.14|outer dense fiber of sperm tails 3B
hg38_v1_chr7_+_142352802_142352827	1.18406	GLI3	ENST00000634605.1|TRBV7-2|ENSG00000282939.1|T cell receptor beta variable 7-2
hg38_v1_chr16_-_11587162_11587289	1.17679	GLI3	ENST00000570904.5|LITAF|ENSG00000189067.14|lipopolysaccharide induced TNF factor	ENST00000574701.5|LITAF|ENSG00000189067.14|lipopolysaccharide induced TNF factor
hg38_v1_chr20_+_38304149_38304168	1.17225	GLI3	ENST00000262865.9|BPI|ENSG00000101425.14|bactericidal permeability increasing protein	ENST00000642449.2|BPI|ENSG00000101425.14|bactericidal permeability increasing protein
hg38_v1_chr17_-_48430205_48430246	1.17164	GLI3	ENST00000336915.11|SKAP1|ENSG00000141293.16|src kinase associated phosphoprotein 1	ENST00000584924.5|SKAP1|ENSG00000141293.16|src kinase associated phosphoprotein 1
hg38_v1_chrX_+_48683763_48683850	1.16873	GLI3	ENST00000376701.5|WAS|ENSG00000015285.11|WASP actin nucleation promoting factor
hg38_v1_chr19_-_54242751_54242804	1.1685	GLI3	ENST00000245621.6|LILRA6|ENSG00000244482.10|leukocyte immunoglobulin like receptor A6	ENST00000396365.6|LILRA6|ENSG00000244482.10|leukocyte immunoglobulin like receptor A6
hg38_v1_chr11_+_1870871_1870896	1.14592	GLI3	ENST00000417766.5|LSP1|ENSG00000130592.17|lymphocyte specific protein 1
hg38_v1_chr1_+_27879638_27879731	1.13574	GLI3	ENST00000456990.1|THEMIS2|ENSG00000130775.16|thymocyte selection associated family member 2
hg38_v1_chr17_-_3916455_3916473	1.1157	GLI3	ENST00000225538.4|P2RX1|ENSG00000108405.4|purinergic receptor P2X 1
hg38_v1_chr13_-_46182136_46182213	1.11024	GLI3	ENST00000323076.7|LCP1|ENSG00000136167.15|lymphocyte cytosolic protein 1
hg38_v1_chr12_+_6946468_6946586	1.10781	GLI3	ENST00000543115.5|PTPN6|ENSG00000111679.17|protein tyrosine phosphatase non-receptor type 6	ENST00000399448.5|PTPN6|ENSG00000111679.17|protein tyrosine phosphatase non-receptor type 6
hg38_v1_chr19_+_35000426_35000470	1.10279	GLI3	ENST00000411896.6|GRAMD1A|ENSG00000089351.15|GRAM domain containing 1A	ENST00000424536.2|GRAMD1A|ENSG00000089351.15|GRAM domain containing 1A
hg38_v1_chr19_-_11577632_11577671	1.0957	GLI3	ENST00000590420.1|ACP5|ENSG00000102575.13|acid phosphatase 5, tartrate resistant	ENST00000648477.1|ACP5|ENSG00000102575.13|acid phosphatase 5, tartrate resistant
hg38_v1_chr8_-_130016536_130016572	1.09396	GLI3	ENST00000519020.5|CYRIB|ENSG00000153310.19|CYFIP related Rac1 interactor B
hg38_v1_chr22_-_50526337_50526474	1.092	GLI3	ENST00000651490.1|TYMP|ENSG00000025708.14|thymidine phosphorylase	ENST00000543927.6|SCO2|ENSG00000284194.3|synthesis of cytochrome C oxidase 2
hg38_v1_chr4_+_153684241_153684319	1.08411	GLI3	ENST00000646219.1|TLR2|ENSG00000137462.9|toll like receptor 2	ENST00000642580.1|TLR2|ENSG00000137462.9|toll like receptor 2	ENST00000643501.1|TLR2|ENSG00000137462.9|toll like receptor 2	ENST00000642700.2|TLR2|ENSG00000137462.9|toll like receptor 2
hg38_v1_chr17_+_83079595_83079622	1.07921	GLI3	ENST00000320095.12|METRNL|ENSG00000176845.13|meteorin like, glial cell differentiation regulator
hg38_v1_chr1_-_212699817_212699846	1.0652	GLI3	ENST00000243440.2|BATF3|ENSG00000123685.9|basic leucine zipper ATF-like transcription factor 3
hg38_v1_chr6_+_33080445_33080487	1.05581	GLI3	ENST00000428835.5|HLA-DPB1|ENSG00000223865.11|major histocompatibility complex, class II, DP beta 1
hg38_v1_chr20_+_3796288_3796317	1.03961	GLI3	ENST00000439880.6|CDC25B|ENSG00000101224.18|cell division cycle 25B	ENST00000245960.10|CDC25B|ENSG00000101224.18|cell division cycle 25B
hg38_v1_chr7_+_142715314_142715346	1.03926	GLI3	ENST00000390399.3|TRBV27|ENSG00000211752.3|T cell receptor beta variable 27
hg38_v1_chr16_-_11587450_11587563	1.0381	GLI3	ENST00000571688.5|LITAF|ENSG00000189067.14|lipopolysaccharide induced TNF factor
hg38_v1_chr21_-_34888683_34888714	1.02701	GLI3	ENST00000344691.8|RUNX1|ENSG00000159216.19|RUNX family transcription factor 1	ENST00000358356.9|RUNX1|ENSG00000159216.19|RUNX family transcription factor 1
hg38_v1_chr9_-_114387973_114387991	1.01974	GLI3	ENST00000374088.8|AKNA|ENSG00000106948.17|AT-hook transcription factor
hg38_v1_chr9_+_92947516_92947529	1.01557	GLI3	ENST00000375482.8|FGD3|ENSG00000127084.19|FYVE, RhoGEF and PH domain containing 3
hg38_v1_chr14_+_61321571_61321587	1.01086	GLI3	ENST00000332981.11|PRKCH|ENSG00000027075.16|protein kinase C eta
hg38_v1_chr1_-_110674919_110674954	1.00956	GLI3	ENST00000369769.4|KCNA3|ENSG00000177272.9|potassium voltage-gated channel subfamily A member 3
hg38_v1_chr19_+_17527250_17527304	1.00482	GLI3	ENST00000599164.6|NIBAN3|ENSG00000167483.19|niban apoptosis regulator 3	ENST00000449408.6|NIBAN3|ENSG00000167483.19|niban apoptosis regulator 3	ENST00000600871.5|NIBAN3|ENSG00000167483.19|niban apoptosis regulator 3	ENST00000599124.1|NIBAN3|ENSG00000167483.19|niban apoptosis regulator 3
hg38_v1_chr12_-_56636318_56636389	0.994076	GLI3	ENST00000549506.5|BAZ2A|ENSG00000076108.12|bromodomain adjacent to zinc finger domain 2A	ENST00000379441.7|BAZ2A|ENSG00000076108.12|bromodomain adjacent to zinc finger domain 2A	ENST00000551812.5|BAZ2A|ENSG00000076108.12|bromodomain adjacent to zinc finger domain 2A
hg38_v1_chr9_-_136996555_136996575	0.988765	GLI3	ENST00000494426.2|CLIC3|ENSG00000169583.13|chloride intracellular channel 3
hg38_v1_chr22_-_36365036_36365112	0.983682	GLI3	ENST00000456729.1|MYH9|ENSG00000100345.22|myosin heavy chain 9	ENST00000401701.1|MYH9|ENSG00000100345.22|myosin heavy chain 9
hg38_v1_chr16_+_28985251_28985418	0.980223	GLI3	ENST00000360872.9|LAT|ENSG00000213658.12|linker for activation of T cells	ENST00000566177.5|LAT|ENSG00000213658.12|linker for activation of T cells
hg38_v1_chr2_+_130611440_130611440	0.979876	GLI3	ENST00000409602.2|POTEJ|ENSG00000222038.4|POTE ankyrin domain family member J
hg38_v1_chr9_+_69820827_69820960	0.976779	GLI3	ENST00000527647.5|C9orf135|ENSG00000204711.9|chromosome 9 open reading frame 135	ENST00000480564.1|C9orf135|ENSG00000204711.9|chromosome 9 open reading frame 135
hg38_v1_chr19_-_11578937_11578986	0.975615	GLI3	ENST00000592659.1|ACP5|ENSG00000102575.13|acid phosphatase 5, tartrate resistant	ENST00000592828.6|ACP5|ENSG00000102575.13|acid phosphatase 5, tartrate resistant	ENST00000218758.9|ACP5|ENSG00000102575.13|acid phosphatase 5, tartrate resistant	ENST00000412435.6|ACP5|ENSG00000102575.13|acid phosphatase 5, tartrate resistant
hg38_v1_chr19_-_19643547_19643561	0.971585	GLI3	ENST00000587238.5|GMIP|ENSG00000089639.11|GEM interacting protein
hg38_v1_chr22_-_50532489_50532532	0.969865	GLI3	ENST00000329363.9|ODF3B|ENSG00000177989.14|outer dense fiber of sperm tails 3B	ENST00000437588.2|ODF3B|ENSG00000177989.14|outer dense fiber of sperm tails 3B
hg38_v1_chr19_-_54281145_54281184	0.965187	GLI3	ENST00000434421.5|LILRB2|ENSG00000131042.15|leukocyte immunoglobulin like receptor B2	ENST00000391749.4|LILRB2|ENSG00000131042.15|leukocyte immunoglobulin like receptor B2
hg38_v1_chr1_+_160796098_160796113	0.962248	GLI3	ENST00000392203.8|LY9|ENSG00000122224.18|lymphocyte antigen 9
hg38_v1_chr19_-_18086904_18086940	0.961511	GLI3	ENST00000322153.11|IL12RB1|ENSG00000096996.16|interleukin 12 receptor subunit beta 1	ENST00000593993.7|IL12RB1|ENSG00000096996.16|interleukin 12 receptor subunit beta 1
hg38_v1_chr16_-_67999468_67999518	0.947239	GLI3	ENST00000393847.6|DPEP2|ENSG00000167261.14|dipeptidase 2	ENST00000573808.1|DPEP2|ENSG00000167261.14|dipeptidase 2	ENST00000572624.5|DPEP2|ENSG00000167261.14|dipeptidase 2
hg38_v1_chr1_+_48222685_48222740	0.943215	GLI3	ENST00000533824.5|SLC5A9|ENSG00000117834.13|solute carrier family 5 member 9	ENST00000236495.9|SLC5A9|ENSG00000117834.13|solute carrier family 5 member 9	ENST00000438567.7|SLC5A9|ENSG00000117834.13|solute carrier family 5 member 9
hg38_v1_chr6_-_109455698_109455792	0.939872	GLI3	ENST00000431946.1|MICAL1|ENSG00000135596.18|microtubule associated monooxygenase, calponin and LIM domain containing 1	ENST00000358577.7|MICAL1|ENSG00000135596.18|microtubule associated monooxygenase, calponin and LIM domain containing 1	ENST00000358807.8|MICAL1|ENSG00000135596.18|microtubule associated monooxygenase, calponin and LIM domain containing 1
hg38_v1_chr16_+_1256059_1256087	0.936399	GLI3	ENST00000397534.6|TPSD1|ENSG00000095917.14|tryptase delta 1	ENST00000211076.5|TPSD1|ENSG00000095917.14|tryptase delta 1
hg38_v1_chr5_-_180809811_180809880	0.933952	GLI3	ENST00000446023.6|MGAT1|ENSG00000131446.17|alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase
hg38_v1_chr12_-_52493250_52493265	0.930985	GLI3	ENST00000330722.7|KRT6A|ENSG00000205420.11|keratin 6A
hg38_v1_chr19_+_5914202_5914275	0.928885	GLI3	ENST00000588776.8|CAPS|ENSG00000105519.18|calcyphosine	ENST00000588865.2|CAPS|ENSG00000105519.18|calcyphosine
hg38_v1_chr2_+_26692686_26692767	0.926997	GLI3	ENST00000620977.1|KCNK3|ENSG00000171303.7|potassium two pore domain channel subfamily K member 3	ENST00000302909.4|KCNK3|ENSG00000171303.7|potassium two pore domain channel subfamily K member 3
hg38_v1_chr20_-_22585451_22585459	0.926769	GLI3	ENST00000377115.4|FOXA2|ENSG00000125798.15|forkhead box A2
hg38_v1_chr19_+_53869439_53869456	0.921357	GLI3	ENST00000391768.2|MYADM|ENSG00000179820.16|myeloid associated differentiation marker
hg38_v1_chr17_-_64390592_64390707	0.918805	GLI3	ENST00000563523.5|PECAM1|ENSG00000261371.6|platelet and endothelial cell adhesion molecule 1
hg38_v1_chr20_+_50190821_50190839	0.915662	GLI3	ENST00000303004.5|CEBPB|ENSG00000172216.6|CCAAT enhancer binding protein beta
hg38_v1_chr11_-_128587551_128587566	0.908139	GLI3	ENST00000392668.8|ETS1|ENSG00000134954.14|ETS proto-oncogene 1, transcription factor
hg38_v1_chr14_-_106389858_106389858	0.906746	GLI3	ENST00000390617.2|IGHV3-35|ENSG00000211957.2|immunoglobulin heavy variable 3-35 (non-functional)
hg38_v1_chr2_-_201071579_201071688	0.904123	GLI3	ENST00000453765.5|FAM126B|ENSG00000155744.10|family with sequence similarity 126 member B	ENST00000452799.5|FAM126B|ENSG00000155744.10|family with sequence similarity 126 member B	ENST00000446678.5|FAM126B|ENSG00000155744.10|family with sequence similarity 126 member B	ENST00000418596.7|FAM126B|ENSG00000155744.10|family with sequence similarity 126 member B	ENST00000681958.1|FAM126B|ENSG00000155744.10|family with sequence similarity 126 member B
hg38_v1_chr20_-_22584547_22584585	0.904017	GLI3	ENST00000419308.7|FOXA2|ENSG00000125798.15|forkhead box A2
hg38_v1_chr19_-_38735405_38735431	0.89673	GLI3	ENST00000597987.5|CAPN12|ENSG00000182472.9|calpain 12	ENST00000595177.1|CAPN12|ENSG00000182472.9|calpain 12
hg38_v1_chr18_+_24014390_24014452	0.893872	GLI3	ENST00000584250.1|TTC39C|ENSG00000168234.13|tetratricopeptide repeat domain 39C
hg38_v1_chr17_-_64398391_64398411	0.892423	GLI3	ENST00000569967.1|PECAM1|ENSG00000261371.6|platelet and endothelial cell adhesion molecule 1
hg38_v1_chr14_-_106791226_106791234	0.891223	GLI3	ENST00000433072.2|IGHV3-72|ENSG00000225698.4|immunoglobulin heavy variable 3-72
hg38_v1_chr5_-_180810086_180810148	0.87993	GLI3	ENST00000506889.1|MGAT1|ENSG00000131446.17|alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase	ENST00000393340.7|MGAT1|ENSG00000131446.17|alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase
hg38_v1_chr1_+_209768482_209768493	0.878539	GLI3	ENST00000367023.5|TRAF3IP3|ENSG00000009790.15|TRAF3 interacting protein 3
hg38_v1_chr14_+_20955484_20955506	0.876185	GLI3	ENST00000304625.3|RNASE2|ENSG00000169385.3|ribonuclease A family member 2
hg38_v1_chr16_-_89201635_89201651	0.873367	GLI3	ENST00000562855.7|SLC22A31|ENSG00000259803.8|solute carrier family 22 member 31
hg38_v1_chr18_+_23949847_23949893	0.871081	GLI3	ENST00000588004.1|LAMA3|ENSG00000053747.17|laminin subunit alpha 3
hg38_v1_chr15_+_90184912_90184981	0.869949	GLI3	ENST00000561085.1|SEMA4B|ENSG00000185033.14|semaphorin 4B	ENST00000332496.10|SEMA4B|ENSG00000185033.14|semaphorin 4B
hg38_v1_chr20_-_23988779_23988779	0.86683	GLI3	ENST00000335694.4|GGTLC1|ENSG00000149435.12|gamma-glutamyltransferase light chain 1
hg38_v1_chrX_+_107206605_107206623	0.860665	GLI3	ENST00000372453.8|DNAAF6|ENSG00000080572.13|dynein axonemal assembly factor 6
hg38_v1_chr9_-_114388020_114388081	0.859318	GLI3	ENST00000312033.3|AKNA|ENSG00000106948.17|AT-hook transcription factor
hg38_v1_chr12_-_10882602_10882657	0.857701	GLI3	ENST00000538332.2|PRH1|ENSG00000231887.7|proline rich protein HaeIII subfamily 1
hg38_v1_chr16_+_50693568_50693635	0.856622	GLI3	ENST00000647318.2|NOD2|ENSG00000167207.14|nucleotide binding oligomerization domain containing 2	ENST00000531674.1|NOD2|ENSG00000167207.14|nucleotide binding oligomerization domain containing 2
hg38_v1_chr11_+_46381645_46381693	0.853271	GLI3	ENST00000617138.4|MDK|ENSG00000110492.16|midkine	ENST00000395566.9|MDK|ENSG00000110492.16|midkine	ENST00000395569.8|MDK|ENSG00000110492.16|midkine
hg38_v1_chr20_+_833705_833732	0.852634	GLI3	ENST00000381941.8|FAM110A|ENSG00000125898.13|family with sequence similarity 110 member A
hg38_v1_chr3_-_72446623_72446623	0.851723	GLI3	ENST00000477973.4|RYBP|ENSG00000163602.11|RING1 and YY1 binding protein
hg38_v1_chr12_+_6772512_6772540	0.849756	GLI3	ENST00000441671.6|LAG3|ENSG00000089692.9|lymphocyte activating 3	ENST00000203629.3|LAG3|ENSG00000089692.9|lymphocyte activating 3
hg38_v1_chr19_-_48617797_48617888	0.849057	GLI3	ENST00000546623.5|RPL18|ENSG00000063177.13|ribosomal protein L18	ENST00000084795.9|RPL18|ENSG00000063177.13|ribosomal protein L18
hg38_v1_chr1_+_156153568_156153607	0.847777	GLI3	ENST00000368284.5|SEMA4A|ENSG00000196189.13|semaphorin 4A	ENST00000368286.6|SEMA4A|ENSG00000196189.13|semaphorin 4A	ENST00000368285.8|SEMA4A|ENSG00000196189.13|semaphorin 4A	ENST00000438830.5|SEMA4A|ENSG00000196189.13|semaphorin 4A
hg38_v1_chr19_+_6887560_6887598	0.836083	GLI3	ENST00000250572.12|ADGRE1|ENSG00000174837.15|adhesion G protein-coupled receptor E1	ENST00000381407.9|ADGRE1|ENSG00000174837.15|adhesion G protein-coupled receptor E1	ENST00000450315.7|ADGRE1|ENSG00000174837.15|adhesion G protein-coupled receptor E1	ENST00000312053.9|ADGRE1|ENSG00000174837.15|adhesion G protein-coupled receptor E1	ENST00000381404.8|ADGRE1|ENSG00000174837.15|adhesion G protein-coupled receptor E1
hg38_v1_chr16_-_4416621_4416632	0.831483	GLI3	ENST00000570645.5|CORO7|ENSG00000262246.6|coronin 7	ENST00000574025.5|CORO7|ENSG00000262246.6|coronin 7	ENST00000572898.1|CORO7|ENSG00000262246.6|coronin 7	ENST00000537233.6|CORO7|ENSG00000262246.6|coronin 7	ENST00000571059.5|CORO7|ENSG00000262246.6|coronin 7
hg38_v1_chr20_+_2207217_2207328	0.830242	GLI3	ENST00000447956.5|ENSG00000226644.5|ENSG00000226644.5|novel transcript	ENST00000411839.1|ENSG00000226644.5|ENSG00000226644.5|novel transcript	ENST00000651531.1|ENSG00000286022.1|ENSG00000286022.1|novel protein
hg38_v1_chr14_-_24634266_24634277	0.827388	GLI3	ENST00000382540.5|GZMB|ENSG00000100453.13|granzyme B
hg38_v1_chr20_+_833734_833780	0.826472	GLI3	ENST00000304189.6|FAM110A|ENSG00000125898.13|family with sequence similarity 110 member A
hg38_v1_chr12_-_54419259_54419272	0.824776	GLI3	ENST00000293379.9|ITGA5|ENSG00000161638.11|integrin subunit alpha 5
hg38_v1_chr17_+_10697576_10697657	0.82253	GLI3	ENST00000379774.5|ADPRM|ENSG00000170222.12|ADP-ribose/CDP-alcohol diphosphatase, manganese dependent
hg38_v1_chr2_-_196171565_196171590	0.82236	GLI3	ENST00000263955.9|STK17B|ENSG00000081320.11|serine/threonine kinase 17b
hg38_v1_chr9_-_127762416_127762457	0.819527	GLI3	ENST00000440630.5|SH2D3C|ENSG00000095370.20|SH2 domain containing 3C	ENST00000429553.5|SH2D3C|ENSG00000095370.20|SH2 domain containing 3C
hg38_v1_chr5_-_180815563_180815587	0.817461	GLI3	ENST00000513431.5|MGAT1|ENSG00000131446.17|alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase	ENST00000514438.1|MGAT1|ENSG00000131446.17|alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase
hg38_v1_chr19_-_10335773_10335806	0.817151	GLI3	ENST00000592439.1|ICAM3|ENSG00000076662.10|intercellular adhesion molecule 3
hg38_v1_chr6_-_166956561_166956611	0.816643	GLI3	ENST00000366855.10|RNASET2|ENSG00000026297.17|ribonuclease T2
hg38_v1_chr17_-_41140487_41140545	0.813994	GLI3	ENST00000345847.4|KRTAP4-6|ENSG00000198090.3|keratin associated protein 4-6
hg38_v1_chr19_+_40611863_40611911	0.812628	GLI3	ENST00000601032.5|LTBP4|ENSG00000090006.18|latent transforming growth factor beta binding protein 4
hg38_v1_chr19_-_54281082_54281116	0.811848	GLI3	ENST00000314446.10|LILRB2|ENSG00000131042.15|leukocyte immunoglobulin like receptor B2
hg38_v1_chr19_+_7355589_7355616	0.809394	GLI3	ENST00000671891.2|ARHGEF18|ENSG00000104880.19|Rho/Rac guanine nucleotide exchange factor 18
hg38_v1_chr4_-_176792913_176792934	0.809175	GLI3	ENST00000618562.2|VEGFC|ENSG00000150630.4|vascular endothelial growth factor C
hg38_v1_chr20_+_841238_841295	0.805813	GLI3	ENST00000541082.2|FAM110A|ENSG00000125898.13|family with sequence similarity 110 member A
hg38_v1_chr7_-_41703062_41703097	0.80565	GLI3	ENST00000242208.5|INHBA|ENSG00000122641.11|inhibin subunit beta A
hg38_v1_chr21_+_33432173_33432319	0.803718	GLI3	ENST00000421802.1|IFNGR2|ENSG00000159128.15|interferon gamma receptor 2
hg38_v1_chr19_+_19668809_19668862	0.797837	GLI3	ENST00000592502.2|ZNF101|ENSG00000181896.12|zinc finger protein 101	ENST00000444249.6|ZNF101|ENSG00000181896.12|zinc finger protein 101
hg38_v1_chr17_-_49209367_49209402	0.797326	GLI3	ENST00000300406.6|GNGT2|ENSG00000167083.7|G protein subunit gamma transducin 2	ENST00000511277.5|GNGT2|ENSG00000167083.7|G protein subunit gamma transducin 2	ENST00000511673.1|GNGT2|ENSG00000167083.7|G protein subunit gamma transducin 2
hg38_v1_chr16_-_88703611_88703625	0.796361	GLI3	ENST00000541206.6|RNF166|ENSG00000158717.11|ring finger protein 166
hg38_v1_chr17_+_47253817_47253853	0.793686	GLI3	ENST00000559488.7|ITGB3|ENSG00000259207.9|integrin subunit beta 3	ENST00000571680.1|ITGB3|ENSG00000259207.9|integrin subunit beta 3
hg38_v1_chr1_+_103749654_103749654	0.788245	GLI3	ENST00000683532.1|AMY1C|ENSG00000187733.7|amylase alpha 1C
hg38_v1_chr11_+_57598184_57598275	0.78791	GLI3	ENST00000677625.1|SERPING1|ENSG00000149131.17|serpin family G member 1	ENST00000676670.1|SERPING1|ENSG00000149131.17|serpin family G member 1
hg38_v1_chr16_+_3065610_3065812	0.786844	GLI3	ENST00000530890.5|IL32|ENSG00000008517.19|interleukin 32	ENST00000444393.7|IL32|ENSG00000008517.19|interleukin 32	ENST00000533097.6|IL32|ENSG00000008517.19|interleukin 32	ENST00000008180.13|IL32|ENSG00000008517.19|interleukin 32	ENST00000396890.6|IL32|ENSG00000008517.19|interleukin 32	ENST00000525228.5|IL32|ENSG00000008517.19|interleukin 32	ENST00000525643.7|IL32|ENSG00000008517.19|interleukin 32	ENST00000548652.5|IL32|ENSG00000008517.19|interleukin 32	ENST00000525377.6|IL32|ENSG00000008517.19|interleukin 32	ENST00000530538.6|IL32|ENSG00000008517.19|interleukin 32	ENST00000549213.5|IL32|ENSG00000008517.19|interleukin 32	ENST00000552936.5|IL32|ENSG00000008517.19|interleukin 32	ENST00000548476.5|IL32|ENSG00000008517.19|interleukin 32	ENST00000552664.5|IL32|ENSG00000008517.19|interleukin 32	ENST00000552356.5|IL32|ENSG00000008517.19|interleukin 32	ENST00000551513.5|IL32|ENSG00000008517.19|interleukin 32	ENST00000382213.7|IL32|ENSG00000008517.19|interleukin 32	ENST00000548246.1|IL32|ENSG00000008517.19|interleukin 32
hg38_v1_chrX_+_65588368_65588394	0.78653	GLI3	ENST00000609672.5|MSN|ENSG00000147065.17|moesin
hg38_v1_chr7_+_142618821_142618849	0.784692	GLI3	ENST00000390393.3|TRBV19|ENSG00000211746.3|T cell receptor beta variable 19
hg38_v1_chr2_+_201116940_201117039	0.776678	GLI3	ENST00000433445.1|CFLAR|ENSG00000003402.20|CASP8 and FADD like apoptosis regulator
hg38_v1_chr1_+_43147890_43147937	0.775732	GLI3	ENST00000335282.5|FAM183A|ENSG00000186973.11|family with sequence similarity 183 member A	ENST00000409396.5|FAM183A|ENSG00000186973.11|family with sequence similarity 183 member A
hg38_v1_chr7_-_128405930_128405973	0.775028	GLI3	ENST00000470772.5|IMPDH1|ENSG00000106348.18|inosine monophosphate dehydrogenase 1	ENST00000480861.5|IMPDH1|ENSG00000106348.18|inosine monophosphate dehydrogenase 1	ENST00000496200.5|IMPDH1|ENSG00000106348.18|inosine monophosphate dehydrogenase 1
hg38_v1_chr11_-_64744102_64744159	0.773284	GLI3	ENST00000431822.5|RASGRP2|ENSG00000068831.19|RAS guanyl releasing protein 2	ENST00000394432.8|RASGRP2|ENSG00000068831.19|RAS guanyl releasing protein 2	ENST00000377486.7|RASGRP2|ENSG00000068831.19|RAS guanyl releasing protein 2
hg38_v1_chr14_+_92652468_92652526	0.772769	GLI3	ENST00000556418.1|RIN3|ENSG00000100599.16|Ras and Rab interactor 3
hg38_v1_chr12_-_44875647_44875657	0.767307	GLI3	ENST00000395487.6|NELL2|ENSG00000184613.11|neural EGFL like 2
hg38_v1_chr11_-_65606959_65607026	0.766989	GLI3	ENST00000532507.5|MAP3K11|ENSG00000173327.8|mitogen-activated protein kinase kinase kinase 11
hg38_v1_chr20_+_3796426_3796435	0.763076	GLI3	ENST00000340833.4|CDC25B|ENSG00000101224.18|cell division cycle 25B
hg38_v1_chr17_+_28744034_28744085	0.760109	GLI3	ENST00000444415.7|TRAF4|ENSG00000076604.15|TNF receptor associated factor 4	ENST00000262396.10|TRAF4|ENSG00000076604.15|TNF receptor associated factor 4
hg38_v1_chr22_+_39014282_39014363	0.759976	GLI3	ENST00000381568.9|ENSG00000284554.2|ENSG00000284554.2|novel protein
hg38_v1_chr9_+_87498491_87498535	0.758362	GLI3	ENST00000622514.4|DAPK1|ENSG00000196730.13|death associated protein kinase 1
hg38_v1_chr3_-_16512895_16512922	0.75784	GLI3	ENST00000449415.5|RFTN1|ENSG00000131378.14|raftlin, lipid raft linker 1	ENST00000441460.5|RFTN1|ENSG00000131378.14|raftlin, lipid raft linker 1
hg38_v1_chr21_+_33229883_33229993	0.757585	GLI3	ENST00000382264.7|IFNAR2|ENSG00000159110.21|interferon alpha and beta receptor subunit 2	ENST00000342136.9|IFNAR2|ENSG00000159110.21|interferon alpha and beta receptor subunit 2	ENST00000404220.7|IFNAR2|ENSG00000159110.21|interferon alpha and beta receptor subunit 2
hg38_v1_chr1_+_183186238_183186271	0.755757	GLI3	ENST00000493293.5|LAMC2|ENSG00000058085.15|laminin subunit gamma 2	ENST00000264144.5|LAMC2|ENSG00000058085.15|laminin subunit gamma 2
hg38_v1_chr11_+_60756953_60757003	0.754864	GLI3	ENST00000528170.5|MS4A15|ENSG00000166961.15|membrane spanning 4-domains A15	ENST00000337911.8|MS4A15|ENSG00000166961.15|membrane spanning 4-domains A15
hg38_v1_chr6_+_31403553_31403672	0.754836	GLI3	ENST00000449934.7|MICA|ENSG00000204520.14|MHC class I polypeptide-related sequence A	ENST00000421350.1|MICA|ENSG00000204520.14|MHC class I polypeptide-related sequence A
hg38_v1_chr11_+_60971777_60971866	0.753393	GLI3	ENST00000542157.5|CD6|ENSG00000013725.14|CD6 molecule	ENST00000433107.6|CD6|ENSG00000013725.14|CD6 molecule	ENST00000352009.9|CD6|ENSG00000013725.14|CD6 molecule	ENST00000452451.6|CD6|ENSG00000013725.14|CD6 molecule
hg38_v1_chr11_-_88337722_88337791	0.753336	GLI3	ENST00000677976.1|CTSC|ENSG00000109861.17|cathepsin C	ENST00000528020.2|CTSC|ENSG00000109861.17|cathepsin C	ENST00000393301.5|CTSC|ENSG00000109861.17|cathepsin C	ENST00000529974.2|CTSC|ENSG00000109861.17|cathepsin C	ENST00000227266.10|CTSC|ENSG00000109861.17|cathepsin C	ENST00000678464.1|CTSC|ENSG00000109861.17|cathepsin C	ENST00000679199.1|CTSC|ENSG00000109861.17|cathepsin C	ENST00000527018.6|CTSC|ENSG00000109861.17|cathepsin C	ENST00000679224.1|CTSC|ENSG00000109861.17|cathepsin C	ENST00000678506.1|CTSC|ENSG00000109861.17|cathepsin C	ENST00000678915.1|CTSC|ENSG00000109861.17|cathepsin C	ENST00000524463.6|CTSC|ENSG00000109861.17|cathepsin C
hg38_v1_chr22_+_39960397_39960397	0.750004	GLI3	ENST00000424496.2|ENSG00000225528.3|ENSG00000225528.3|novel protein similar to translation machinery associated 7 homolog (S. cerevisiae) TMA7
hg38_v1_chr21_+_42403874_42403941	0.746885	GLI3	ENST00000319294.11|UBASH3A|ENSG00000160185.15|ubiquitin associated and SH3 domain containing A	ENST00000398367.1|UBASH3A|ENSG00000160185.15|ubiquitin associated and SH3 domain containing A
hg38_v1_chr6_+_151494007_151494078	0.744733	GLI3	ENST00000239374.8|CCDC170|ENSG00000120262.10|coiled-coil domain containing 170
hg38_v1_chrX_+_107206632_107206676	0.742653	GLI3	ENST00000535523.5|DNAAF6|ENSG00000080572.13|dynein axonemal assembly factor 6	ENST00000673764.1|DNAAF6|ENSG00000080572.13|dynein axonemal assembly factor 6
hg38_v1_chr16_+_29821311_29821342	0.741177	GLI3	ENST00000565164.1|MVP|ENSG00000013364.19|major vault protein	ENST00000570234.5|MVP|ENSG00000013364.19|major vault protein
hg38_v1_chr6_+_17102044_17102055	0.738741	GLI3	ENST00000536551.6|STMND1|ENSG00000230873.9|stathmin domain containing 1
hg38_v1_chr5_+_170232912_170232991	0.734155	GLI3	ENST00000524171.5|C5orf58|ENSG00000234511.10|chromosome 5 open reading frame 58	ENST00000517575.4|C5orf58|ENSG00000234511.10|chromosome 5 open reading frame 58	ENST00000518395.2|C5orf58|ENSG00000234511.10|chromosome 5 open reading frame 58	ENST00000593851.5|C5orf58|ENSG00000234511.10|chromosome 5 open reading frame 58
hg38_v1_chr10_-_95290992_95291015	0.725723	GLI3	ENST00000329399.7|PDLIM1|ENSG00000107438.9|PDZ and LIM domain 1
hg38_v1_chr7_+_142492121_142492145	0.724238	GLI3	ENST00000390374.3|TRBV7-6|ENSG00000211727.3|T cell receptor beta variable 7-6
hg38_v1_chr11_+_32829903_32829939	0.724126	GLI3	ENST00000257836.4|PRRG4|ENSG00000135378.4|proline rich and Gla domain 4
hg38_v1_chr11_-_111449981_111450014	0.723833	GLI3	ENST00000531398.1|POU2AF1|ENSG00000110777.12|POU class 2 homeobox associating factor 1
hg38_v1_chr1_-_202159977_202160038	0.723351	GLI3	ENST00000367279.8|PTPN7|ENSG00000143851.15|protein tyrosine phosphatase non-receptor type 7
hg38_v1_chr7_+_77537258_77537355	0.723186	GLI3	ENST00000248594.11|PTPN12|ENSG00000127947.16|protein tyrosine phosphatase non-receptor type 12
hg38_v1_chr17_+_77373085_77373190	0.720234	GLI3	ENST00000423034.6|SEPTIN9|ENSG00000184640.20|septin 9
hg38_v1_chr19_-_48746797_48746909	0.717146	GLI3	ENST00000602105.1|IZUMO1|ENSG00000182264.9|izumo sperm-egg fusion 1	ENST00000332955.7|IZUMO1|ENSG00000182264.9|izumo sperm-egg fusion 1
hg38_v1_chr10_-_6062290_6062315	0.716352	GLI3	ENST00000256876.10|IL2RA|ENSG00000134460.18|interleukin 2 receptor subunit alpha	ENST00000379954.5|IL2RA|ENSG00000134460.18|interleukin 2 receptor subunit alpha
hg38_v1_chr2_+_227871618_227871682	0.716028	GLI3	ENST00000309931.3|DAW1|ENSG00000123977.10|dynein assembly factor with WD repeats 1	ENST00000440997.1|DAW1|ENSG00000123977.10|dynein assembly factor with WD repeats 1
hg38_v1_chr7_-_100436425_100436521	0.715174	GLI3	ENST00000292330.3|PPP1R35|ENSG00000160813.7|protein phosphatase 1 regulatory subunit 35
hg38_v1_chr16_-_4416564_4416604	0.715163	GLI3	ENST00000572467.5|CORO7-PAM16|ENSG00000103426.12|CORO7-PAM16 readthrough	ENST00000251166.9|CORO7|ENSG00000262246.6|coronin 7	ENST00000572044.1|CORO7|ENSG00000262246.6|coronin 7	ENST00000571052.5|CORO7|ENSG00000262246.6|coronin 7
hg38_v1_chr22_-_50527689_50527726	0.713583	GLI3	ENST00000652401.1|TYMP|ENSG00000025708.14|thymidine phosphorylase
hg38_v1_chr9_-_136742903_136742959	0.713072	GLI3	ENST00000474369.1|LCN10|ENSG00000187922.14|lipocalin 10	ENST00000497771.6|LCN10|ENSG00000187922.14|lipocalin 10	ENST00000527229.5|LCN10|ENSG00000187922.14|lipocalin 10
hg38_v1_chr6_-_24877262_24877365	0.712728	GLI3	ENST00000378023.8|RIPOR2|ENSG00000111913.20|RHO family interacting cell polarization regulator 2	ENST00000540914.5|RIPOR2|ENSG00000111913.20|RHO family interacting cell polarization regulator 2
hg38_v1_chr12_-_95996302_95996365	0.712609	GLI3	ENST00000261208.8|HAL|ENSG00000084110.11|histidine ammonia-lyase	ENST00000538703.5|HAL|ENSG00000084110.11|histidine ammonia-lyase	ENST00000541929.5|HAL|ENSG00000084110.11|histidine ammonia-lyase
hg38_v1_chr11_-_61356793_61356811	0.709961	GLI3	ENST00000539890.1|CYB561A3|ENSG00000162144.10|cytochrome b561 family member A3
hg38_v1_chr20_+_44714853_44714939	0.708911	GLI3	ENST00000372865.4|CCN5|ENSG00000064205.11|cellular communication network factor 5
hg38_v1_chr19_-_54189550_54189640	0.706162	GLI3	ENST00000338624.10|MBOAT7|ENSG00000125505.17|membrane bound O-acyltransferase domain containing 7	ENST00000245615.6|MBOAT7|ENSG00000125505.17|membrane bound O-acyltransferase domain containing 7
hg38_v1_chr17_+_28744002_28744033	0.705403	GLI3	ENST00000618771.1|TRAF4|ENSG00000076604.15|TNF receptor associated factor 4	ENST00000262395.10|TRAF4|ENSG00000076604.15|TNF receptor associated factor 4	ENST00000422344.5|TRAF4|ENSG00000076604.15|TNF receptor associated factor 4
hg38_v1_chr6_-_106974721_106974740	0.704083	GLI3	ENST00000606017.2|CD24|ENSG00000272398.6|CD24 molecule	ENST00000620405.1|CD24|ENSG00000272398.6|CD24 molecule
hg38_v1_chr3_+_130581741_130581741	0.703295	GLI3	ENST00000511332.1|COL6A6|ENSG00000206384.10|collagen type VI alpha 6 chain
hg38_v1_chr6_-_166956400_166956476	0.702516	GLI3	ENST00000620173.5|RNASET2|ENSG00000026297.17|ribonuclease T2	ENST00000683770.1|RNASET2|ENSG00000026297.17|ribonuclease T2
hg38_v1_chr11_+_60056653_60056688	0.701182	GLI3	ENST00000278865.8|MS4A3|ENSG00000149516.14|membrane spanning 4-domains A3
hg38_v1_chr16_+_28985095_28985123	0.699674	GLI3	ENST00000454369.6|LAT|ENSG00000213658.12|linker for activation of T cells
hg38_v1_chr19_+_49496424_49496454	0.698367	GLI3	ENST00000596873.1|RPS11|ENSG00000142534.7|ribosomal protein S11	ENST00000594493.1|RPS11|ENSG00000142534.7|ribosomal protein S11	ENST00000270625.7|RPS11|ENSG00000142534.7|ribosomal protein S11	ENST00000599561.1|RPS11|ENSG00000142534.7|ribosomal protein S11
hg38_v1_chr1_-_103696209_103696215	0.698096	GLI3	ENST00000330330.10|AMY1B|ENSG00000174876.17|amylase alpha 1B
hg38_v1_chr5_+_136028979_136029001	0.697257	GLI3	ENST00000442011.7|TGFBI|ENSG00000120708.17|transforming growth factor beta induced
hg38_v1_chr19_-_3606849_3606900	0.696168	GLI3	ENST00000375190.10|TBXA2R|ENSG00000006638.13|thromboxane A2 receptor
hg38_v1_chr10_+_48684859_48684880	0.692809	GLI3	ENST00000360890.6|WDFY4|ENSG00000128815.19|WDFY family member 4	ENST00000325239.11|WDFY4|ENSG00000128815.19|WDFY family member 4
hg38_v1_chr14_-_105601728_105601728	0.691153	GLI3	ENST00000641420.1|IGHE|ENSG00000211891.6|immunoglobulin heavy constant epsilon	ENST00000390541.2|IGHE|ENSG00000211891.6|immunoglobulin heavy constant epsilon
hg38_v1_chr20_+_49982969_49982989	0.6895	GLI3	ENST00000244050.3|SNAI1|ENSG00000124216.4|snail family transcriptional repressor 1
hg38_v1_chrY_+_12905711_12905755	0.68937	GLI3	ENST00000440554.1|DDX3Y|ENSG00000067048.17|DEAD-box helicase 3 Y-linked
hg38_v1_chr17_+_78378633_78378678	0.689156	GLI3	ENST00000262764.11|PGS1|ENSG00000087157.19|phosphatidylglycerophosphate synthase 1	ENST00000589689.5|PGS1|ENSG00000087157.19|phosphatidylglycerophosphate synthase 1	ENST00000592043.5|PGS1|ENSG00000087157.19|phosphatidylglycerophosphate synthase 1	ENST00000587356.1|PGS1|ENSG00000087157.19|phosphatidylglycerophosphate synthase 1
hg38_v1_chr1_-_182604379_182604399	0.687536	GLI3	ENST00000367558.6|RGS16|ENSG00000143333.7|regulator of G protein signaling 16
hg38_v1_chr20_+_833781_833809	0.685379	GLI3	ENST00000381939.1|FAM110A|ENSG00000125898.13|family with sequence similarity 110 member A
hg38_v1_chr17_-_81653693_81653737	0.682961	GLI3	ENST00000571004.1|PDE6G|ENSG00000185527.12|phosphodiesterase 6G
hg38_v1_chr6_+_31498071_31498086	0.677551	GLI3	ENST00000399150.7|MICB|ENSG00000204516.10|MHC class I polypeptide-related sequence B
hg38_v1_chr6_+_42915989_42916002	0.677036	GLI3	ENST00000441198.4|PTCRA|ENSG00000171611.10|pre T cell antigen receptor alpha	ENST00000446507.5|PTCRA|ENSG00000171611.10|pre T cell antigen receptor alpha	ENST00000616441.2|PTCRA|ENSG00000171611.10|pre T cell antigen receptor alpha
hg38_v1_chr7_+_142391884_142391938	0.672458	GLI3	ENST00000390363.2|TRBV9|ENSG00000211716.2|T cell receptor beta variable 9
hg38_v1_chr14_+_69611586_69611604	0.669259	GLI3	ENST00000342745.5|SUSD6|ENSG00000100647.8|sushi domain containing 6
hg38_v1_chr16_+_57999546_57999580	0.669143	GLI3	ENST00000561743.5|USB1|ENSG00000103005.12|U6 snRNA biogenesis phosphodiesterase 1
hg38_v1_chr1_-_19484635_19484664	0.668892	GLI3	ENST00000433834.5|CAPZB|ENSG00000077549.19|capping actin protein of muscle Z-line subunit beta
hg38_v1_chr14_+_75278820_75278977	0.668832	GLI3	ENST00000554617.1|FOS|ENSG00000170345.10|Fos proto-oncogene, AP-1 transcription factor subunit	ENST00000554212.5|FOS|ENSG00000170345.10|Fos proto-oncogene, AP-1 transcription factor subunit	ENST00000535987.5|FOS|ENSG00000170345.10|Fos proto-oncogene, AP-1 transcription factor subunit	ENST00000303562.9|FOS|ENSG00000170345.10|Fos proto-oncogene, AP-1 transcription factor subunit	ENST00000555242.1|FOS|ENSG00000170345.10|Fos proto-oncogene, AP-1 transcription factor subunit
hg38_v1_chr11_+_35180342_35180383	0.664967	GLI3	ENST00000639002.1|CD44|ENSG00000026508.20|CD44 molecule (Indian blood group)
hg38_v1_chr1_+_207496229_207496255	0.664804	GLI3	ENST00000367051.6|CR1|ENSG00000203710.12|complement C3b/C4b receptor 1 (Knops blood group)	ENST00000367053.6|CR1|ENSG00000203710.12|complement C3b/C4b receptor 1 (Knops blood group)	ENST00000367052.6|CR1|ENSG00000203710.12|complement C3b/C4b receptor 1 (Knops blood group)
hg38_v1_chr16_+_762506_762524	0.661127	GLI3	ENST00000569566.2|MSLN|ENSG00000102854.16|mesothelin
hg38_v1_chr11_+_122838492_122838507	0.660652	GLI3	ENST00000227348.9|CRTAM|ENSG00000109943.9|cytotoxic and regulatory T cell molecule
hg38_v1_chr7_-_150341615_150341669	0.657513	GLI3	ENST00000223271.8|RARRES2|ENSG00000106538.10|retinoic acid receptor responder 2	ENST00000466675.5|RARRES2|ENSG00000106538.10|retinoic acid receptor responder 2	ENST00000482669.1|RARRES2|ENSG00000106538.10|retinoic acid receptor responder 2	ENST00000467793.5|RARRES2|ENSG00000106538.10|retinoic acid receptor responder 2
hg38_v1_chr7_+_150801522_150801568	0.65333	GLI3	ENST00000461345.5|TMEM176A|ENSG00000002933.9|transmembrane protein 176A
hg38_v1_chr3_+_10026409_10026499	0.652821	GLI3	ENST00000287647.7|FANCD2|ENSG00000144554.13|FA complementation group D2	ENST00000676013.1|FANCD2|ENSG00000144554.13|FA complementation group D2	ENST00000675286.1|FANCD2|ENSG00000144554.13|FA complementation group D2	ENST00000419585.5|FANCD2|ENSG00000144554.13|FA complementation group D2
hg38_v1_chr18_-_12884151_12884338	0.652527	GLI3	ENST00000591115.5|PTPN2|ENSG00000175354.20|protein tyrosine phosphatase non-receptor type 2	ENST00000309660.10|PTPN2|ENSG00000175354.20|protein tyrosine phosphatase non-receptor type 2	ENST00000353319.8|PTPN2|ENSG00000175354.20|protein tyrosine phosphatase non-receptor type 2	ENST00000327283.7|PTPN2|ENSG00000175354.20|protein tyrosine phosphatase non-receptor type 2
hg38_v1_chr18_+_2655693_2655734	0.6524	GLI3	ENST00000320876.11|SMCHD1|ENSG00000101596.16|structural maintenance of chromosomes flexible hinge domain containing 1
hg38_v1_chr6_-_106975452_106975467	0.649199	GLI3	ENST00000619869.1|CD24|ENSG00000272398.6|CD24 molecule	ENST00000619133.4|CD24|ENSG00000272398.6|CD24 molecule
hg38_v1_chr4_+_73869385_73869400	0.648184	GLI3	ENST00000395761.4|CXCL1|ENSG00000163739.5|C-X-C motif chemokine ligand 1
hg38_v1_chr21_-_26573145_26573209	0.647236	GLI3	ENST00000400043.3|CYYR1|ENSG00000166265.13|cysteine and tyrosine rich 1
hg38_v1_chr3_-_50611767_50611781	0.641404	GLI3	ENST00000443053.6|CISH|ENSG00000114737.16|cytokine inducible SH2 containing protein	ENST00000348721.4|CISH|ENSG00000114737.16|cytokine inducible SH2 containing protein
hg38_v1_chr22_+_39077264_39077293	0.641011	GLI3	ENST00000407997.4|APOBEC3G|ENSG00000239713.9|apolipoprotein B mRNA editing enzyme catalytic subunit 3G
hg38_v1_chr7_+_143288215_143288361	0.639614	GLI3	ENST00000619992.4|CASP2|ENSG00000106144.20|caspase 2	ENST00000310447.10|CASP2|ENSG00000106144.20|caspase 2
hg38_v1_chr11_-_65857543_65857697	0.633119	GLI3	ENST00000534784.1|CFL1|ENSG00000172757.13|cofilin 1
hg38_v1_chr19_+_35717973_35718018	0.633044	GLI3	ENST00000673918.1|KMT2B|ENSG00000272333.7|lysine methyltransferase 2B	ENST00000420124.4|KMT2B|ENSG00000272333.7|lysine methyltransferase 2B
hg38_v1_chr1_+_207496147_207496164	0.632314	GLI3	ENST00000400960.7|CR1|ENSG00000203710.12|complement C3b/C4b receptor 1 (Knops blood group)	ENST00000367049.9|CR1|ENSG00000203710.12|complement C3b/C4b receptor 1 (Knops blood group)
hg38_v1_chr19_+_40586774_40586896	0.631928	GLI3	ENST00000594298.5|SHKBP1|ENSG00000160410.15|SH3KBP1 binding protein 1	ENST00000597396.5|SHKBP1|ENSG00000160410.15|SH3KBP1 binding protein 1
hg38_v1_chr1_-_161549892_161549905	0.631293	GLI3	ENST00000426740.7|FCGR3A|ENSG00000203747.12|Fc fragment of IgG receptor IIIa
hg38_v1_chr4_-_75940239_75940265	0.630671	GLI3	ENST00000505594.1|NAAA|ENSG00000138744.16|N-acylethanolamine acid amidase
hg38_v1_chr2_+_113890039_113890157	0.629191	GLI3	ENST00000443297.5|ACTR3|ENSG00000115091.12|actin related protein 3	ENST00000263238.7|ACTR3|ENSG00000115091.12|actin related protein 3	ENST00000415792.5|ACTR3|ENSG00000115091.12|actin related protein 3
hg38_v1_chr10_+_92691897_92692032	0.628874	GLI3	ENST00000492654.3|HHEX|ENSG00000152804.11|hematopoietically expressed homeobox
hg38_v1_chr7_+_142500027_142500028	0.627297	GLI3	ENST00000390375.2|TRBV5-6|ENSG00000211728.2|T cell receptor beta variable 5-6
hg38_v1_chr17_-_7114240_7114309	0.625898	GLI3	ENST00000446679.6|ASGR2|ENSG00000161944.16|asialoglycoprotein receptor 2
hg38_v1_chr19_+_19668877_19668901	0.62576	GLI3	ENST00000415784.6|ZNF101|ENSG00000181896.12|zinc finger protein 101
hg38_v1_chr5_-_157575741_157575758	0.625204	GLI3	ENST00000517905.1|ADAM19|ENSG00000135074.16|ADAM metallopeptidase domain 19
hg38_v1_chr14_-_91836440_91836461	0.624973	GLI3	ENST00000340892.9|TC2N|ENSG00000165929.13|tandem C2 domains, nuclear	ENST00000360594.9|TC2N|ENSG00000165929.13|tandem C2 domains, nuclear
hg38_v1_chr1_+_103749898_103749898	0.624804	GLI3	ENST00000622339.5|AMY1C|ENSG00000187733.7|amylase alpha 1C
hg38_v1_chr1_+_207321668_207321791	0.624577	GLI3	ENST00000367064.9|CD55|ENSG00000196352.16|CD55 molecule (Cromer blood group)	ENST00000314754.12|CD55|ENSG00000196352.16|CD55 molecule (Cromer blood group)	ENST00000367067.8|CD55|ENSG00000196352.16|CD55 molecule (Cromer blood group)	ENST00000644836.1|CD55|ENSG00000196352.16|CD55 molecule (Cromer blood group)	ENST00000343420.6|CD55|ENSG00000196352.16|CD55 molecule (Cromer blood group)
hg38_v1_chr1_-_92483947_92483960	0.62304	GLI3	ENST00000370332.5|GFI1|ENSG00000162676.12|growth factor independent 1 transcriptional repressor
hg38_v1_chr16_+_31033513_31033611	0.621573	GLI3	ENST00000313843.8|STX4|ENSG00000103496.15|syntaxin 4
hg38_v1_chrX_+_46837034_46837050	0.621405	GLI3	ENST00000218340.4|RP2|ENSG00000102218.6|RP2 activator of ARL3 GTPase
hg38_v1_chr1_+_179293714_179293756	0.620358	GLI3	ENST00000540564.5|SOAT1|ENSG00000057252.13|sterol O-acyltransferase 1	ENST00000539888.5|SOAT1|ENSG00000057252.13|sterol O-acyltransferase 1
hg38_v1_chr22_+_46296850_46296969	0.619352	GLI3	ENST00000454366.2|GTSE1|ENSG00000075218.19|G2 and S-phase expressed 1
hg38_v1_chr14_+_21965451_21965472	0.616361	GLI3	ENST00000390442.3|TRAV12-3|ENSG00000211794.3|T cell receptor alpha variable 12-3
hg38_v1_chr22_+_31248402_31248487	0.611872	GLI3	ENST00000333611.8|LIMK2|ENSG00000182541.18|LIM domain kinase 2	ENST00000340552.4|LIMK2|ENSG00000182541.18|LIM domain kinase 2
hg38_v1_chr12_-_120250145_120250168	0.610854	GLI3	ENST00000458477.6|PXN|ENSG00000089159.17|paxillin
hg38_v1_chr12_-_44875980_44876016	0.60834	GLI3	ENST00000548826.5|NELL2|ENSG00000184613.11|neural EGFL like 2
hg38_v1_chr9_+_87497675_87497696	0.607825	GLI3	ENST00000472284.5|DAPK1|ENSG00000196730.13|death associated protein kinase 1	ENST00000469640.6|DAPK1|ENSG00000196730.13|death associated protein kinase 1
hg38_v1_chr19_+_35000275_35000338	0.605303	GLI3	ENST00000317991.10|GRAMD1A|ENSG00000089351.15|GRAM domain containing 1A	ENST00000680623.1|GRAMD1A|ENSG00000089351.15|GRAM domain containing 1A
hg38_v1_chr22_+_37639660_37639700	0.601581	GLI3	ENST00000649765.2|SH3BP1|ENSG00000100092.24|SH3 domain binding protein 1	ENST00000451997.6|ENSG00000285304.1|ENSG00000285304.1|novel protein
hg38_v1_chr6_-_53348902_53348974	0.598011	GLI3	ENST00000370913.5|ELOVL5|ENSG00000012660.14|ELOVL fatty acid elongase 5	ENST00000304434.11|ELOVL5|ENSG00000012660.14|ELOVL fatty acid elongase 5
hg38_v1_chr19_-_14518383_14518407	0.594879	GLI3	ENST00000254322.3|DNAJB1|ENSG00000132002.9|DnaJ heat shock protein family (Hsp40) member B1	ENST00000595139.2|DNAJB1|ENSG00000132002.9|DnaJ heat shock protein family (Hsp40) member B1
hg38_v1_chrX_+_154398367_154398413	0.594027	GLI3	ENST00000436473.5|RPL10|ENSG00000147403.18|ribosomal protein L10	ENST00000344746.8|RPL10|ENSG00000147403.18|ribosomal protein L10	ENST00000369817.7|RPL10|ENSG00000147403.18|ribosomal protein L10	ENST00000458500.5|RPL10|ENSG00000147403.18|ribosomal protein L10
hg38_v1_chr11_-_65857763_65857868	0.590307	GLI3	ENST00000531407.5|CFL1|ENSG00000172757.13|cofilin 1
hg38_v1_chr7_+_102433519_102433625	0.589792	GLI3	ENST00000356387.6|ORAI2|ENSG00000160991.17|ORAI calcium release-activated calcium modulator 2	ENST00000478730.7|ORAI2|ENSG00000160991.17|ORAI calcium release-activated calcium modulator 2	ENST00000495936.7|ORAI2|ENSG00000160991.17|ORAI calcium release-activated calcium modulator 2	ENST00000611770.5|ORAI2|ENSG00000160991.17|ORAI calcium release-activated calcium modulator 2	ENST00000403646.8|ORAI2|ENSG00000160991.17|ORAI calcium release-activated calcium modulator 2
hg38_v1_chr11_+_46381698_46381746	0.589218	GLI3	ENST00000395565.5|MDK|ENSG00000110492.16|midkine
hg38_v1_chr13_+_27251569_27251604	0.588885	GLI3	ENST00000272274.8|RPL21|ENSG00000122026.11|ribosomal protein L21	ENST00000319826.8|RPL21|ENSG00000122026.11|ribosomal protein L21	ENST00000326092.8|RPL21|ENSG00000122026.11|ribosomal protein L21
hg38_v1_chr16_-_88785210_88785227	0.583182	GLI3	ENST00000301015.14|PIEZO1|ENSG00000103335.22|piezo type mechanosensitive ion channel component 1
hg38_v1_chrX_-_40647509_40647573	0.583021	GLI3	ENST00000378421.1|CXorf38|ENSG00000185753.13|chromosome X open reading frame 38	ENST00000378426.5|CXorf38|ENSG00000185753.13|chromosome X open reading frame 38	ENST00000327877.10|CXorf38|ENSG00000185753.13|chromosome X open reading frame 38
hg38_v1_chr11_+_46381753_46381766	0.581232	GLI3	ENST00000407067.1|MDK|ENSG00000110492.16|midkine
hg38_v1_chr19_+_41708585_41708634	0.575422	GLI3	ENST00000398599.8|CEACAM5|ENSG00000105388.16|CEA cell adhesion molecule 5	ENST00000221992.11|CEACAM5|ENSG00000105388.16|CEA cell adhesion molecule 5
hg38_v1_chr8_-_66613208_66613224	0.575013	GLI3	ENST00000522677.8|MYBL1|ENSG00000185697.17|MYB proto-oncogene like 1
hg38_v1_chr16_-_1230089_1230184	0.574873	GLI3	ENST00000612142.1|TPSB2|ENSG00000197253.13|tryptase beta 2	ENST00000606293.5|TPSB2|ENSG00000197253.13|tryptase beta 2
hg38_v1_chr14_+_71586261_71586286	0.574853	GLI3	ENST00000358550.6|SIPA1L1|ENSG00000197555.10|signal induced proliferation associated 1 like 1
hg38_v1_chr7_-_150801325_150801378	0.574423	GLI3	ENST00000447204.6|TMEM176B|ENSG00000106565.18|transmembrane protein 176B
hg38_v1_chr18_-_3013114_3013157	0.572556	GLI3	ENST00000677752.1|LPIN2|ENSG00000101577.10|lipin 2
hg38_v1_chr19_-_54189295_54189398	0.571777	GLI3	ENST00000414665.5|MBOAT7|ENSG00000125505.17|membrane bound O-acyltransferase domain containing 7	ENST00000453320.1|MBOAT7|ENSG00000125505.17|membrane bound O-acyltransferase domain containing 7
hg38_v1_chr22_-_23580223_23580309	0.571674	GLI3	ENST00000249053.3|IGLL1|ENSG00000128322.7|immunoglobulin lambda like polypeptide 1	ENST00000330377.3|IGLL1|ENSG00000128322.7|immunoglobulin lambda like polypeptide 1	ENST00000438703.1|IGLL1|ENSG00000128322.7|immunoglobulin lambda like polypeptide 1
hg38_v1_chr1_-_84574407_84574485	0.569985	GLI3	ENST00000370630.6|CTBS|ENSG00000117151.13|chitobiase
hg38_v1_chr19_+_40627033_40627259	0.569877	GLI3	ENST00000599225.1|LTBP4|ENSG00000090006.18|latent transforming growth factor beta binding protein 4	ENST00000598166.2|LTBP4|ENSG00000090006.18|latent transforming growth factor beta binding protein 4
hg38_v1_chrX_+_12791353_12791488	0.56978	GLI3	ENST00000380663.7|PRPS2|ENSG00000101911.13|phosphoribosyl pyrophosphate synthetase 2	ENST00000398491.6|PRPS2|ENSG00000101911.13|phosphoribosyl pyrophosphate synthetase 2	ENST00000380668.10|PRPS2|ENSG00000101911.13|phosphoribosyl pyrophosphate synthetase 2	ENST00000489404.5|PRPS2|ENSG00000101911.13|phosphoribosyl pyrophosphate synthetase 2
hg38_v1_chr7_+_143288364_143288455	0.568476	GLI3	ENST00000392925.6|CASP2|ENSG00000106144.20|caspase 2
hg38_v1_chr22_+_39014249_39014268	0.567719	GLI3	ENST00000361441.5|APOBEC3C|ENSG00000244509.4|apolipoprotein B mRNA editing enzyme catalytic subunit 3C
hg38_v1_chr7_+_150801695_150801801	0.566355	GLI3	ENST00000475536.5|TMEM176A|ENSG00000002933.9|transmembrane protein 176A	ENST00000468689.2|TMEM176A|ENSG00000002933.9|transmembrane protein 176A
hg38_v1_chr17_-_7114648_7114702	0.565412	GLI3	ENST00000355035.9|ASGR2|ENSG00000161944.16|asialoglycoprotein receptor 2
hg38_v1_chr6_+_35468393_35468417	0.564657	GLI3	ENST00000322203.7|RPL10A|ENSG00000198755.11|ribosomal protein L10a
hg38_v1_chr3_-_39153512_39153623	0.563129	GLI3	ENST00000273153.10|CSRNP1|ENSG00000144655.15|cysteine and serine rich nuclear protein 1
hg38_v1_chr17_-_7114813_7114831	0.558498	GLI3	ENST00000254850.11|ASGR2|ENSG00000161944.16|asialoglycoprotein receptor 2
hg38_v1_chr4_-_973532_973590	0.556692	GLI3	ENST00000273814.8|DGKQ|ENSG00000145214.14|diacylglycerol kinase theta
hg38_v1_chr19_-_10569022_10569059	0.555002	GLI3	ENST00000335766.2|CDKN2D|ENSG00000129355.7|cyclin dependent kinase inhibitor 2D
hg38_v1_chr1_-_156752223_156752242	0.553871	GLI3	ENST00000368209.9|HDGF|ENSG00000143321.19|heparin binding growth factor
hg38_v1_chr5_+_179732811_179732842	0.553784	GLI3	ENST00000292599.4|MAML1|ENSG00000161021.13|mastermind like transcriptional coactivator 1
hg38_v1_chr11_-_65900375_65900397	0.553147	GLI3	ENST00000312562.7|FOSL1|ENSG00000175592.9|FOS like 1, AP-1 transcription factor subunit
hg38_v1_chr6_-_33080767_33080781	0.552914	GLI3	ENST00000453337.1|HLA-DPA1|ENSG00000231389.7|major histocompatibility complex, class II, DP alpha 1	ENST00000417724.1|HLA-DPA1|ENSG00000231389.7|major histocompatibility complex, class II, DP alpha 1
hg38_v1_chr1_-_160885163_160885185	0.552019	GLI3	ENST00000326245.4|ITLN1|ENSG00000179914.5|intelectin 1
hg38_v1_chr3_+_186930759_186930779	0.551694	GLI3	ENST00000677292.1|ST6GAL1|ENSG00000073849.16|ST6 beta-galactoside alpha-2,6-sialyltransferase 1	ENST00000458216.5|ST6GAL1|ENSG00000073849.16|ST6 beta-galactoside alpha-2,6-sialyltransferase 1
hg38_v1_chr19_-_11262499_11262533	0.551681	GLI3	ENST00000294618.12|DOCK6|ENSG00000130158.14|dedicator of cytokinesis 6
hg38_v1_chr14_+_61529005_61529128	0.550857	GLI3	ENST00000556347.1|ENSG00000258989.1|ENSG00000258989.1|novel protein
hg38_v1_chr11_-_65900413_65900424	0.549896	GLI3	ENST00000448083.6|FOSL1|ENSG00000175592.9|FOS like 1, AP-1 transcription factor subunit	ENST00000531493.5|FOSL1|ENSG00000175592.9|FOS like 1, AP-1 transcription factor subunit	ENST00000532401.1|FOSL1|ENSG00000175592.9|FOS like 1, AP-1 transcription factor subunit
hg38_v1_chr7_-_96709780_96709854	0.549835	GLI3	ENST00000623693.3|SEM1|ENSG00000127922.9|SEM1 26S proteasome complex subunit	ENST00000623498.3|SEM1|ENSG00000127922.9|SEM1 26S proteasome complex subunit	ENST00000488005.5|SEM1|ENSG00000127922.9|SEM1 26S proteasome complex subunit	ENST00000413065.5|SEM1|ENSG00000127922.9|SEM1 26S proteasome complex subunit
hg38_v1_chrX_+_65667645_65667661	0.548409	GLI3	ENST00000360270.7|MSN|ENSG00000147065.17|moesin
hg38_v1_chr16_+_89720980_89721021	0.548391	GLI3	ENST00000289816.9|ZNF276|ENSG00000158805.12|zinc finger protein 276	ENST00000568064.5|ZNF276|ENSG00000158805.12|zinc finger protein 276
hg38_v1_chr17_+_74274229_74274238	0.548326	GLI3	ENST00000311014.11|DNAI2|ENSG00000171595.14|dynein axonemal intermediate chain 2
hg38_v1_chr16_-_18790260_18790308	0.545962	GLI3	ENST00000565420.5|RPS15A|ENSG00000134419.15|ribosomal protein S15a
hg38_v1_chr2_-_20012661_20012675	0.544832	GLI3	ENST00000421259.2|MATN3|ENSG00000132031.13|matrilin 3	ENST00000407540.8|MATN3|ENSG00000132031.13|matrilin 3
hg38_v1_chr5_-_180815528_180815561	0.543105	GLI3	ENST00000333055.8|MGAT1|ENSG00000131446.17|alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase
hg38_v1_chr1_-_160579439_160579516	0.542599	GLI3	ENST00000368054.8|CD84|ENSG00000066294.15|CD84 molecule	ENST00000368048.7|CD84|ENSG00000066294.15|CD84 molecule	ENST00000311224.8|CD84|ENSG00000066294.15|CD84 molecule	ENST00000368051.3|CD84|ENSG00000066294.15|CD84 molecule	ENST00000534968.5|CD84|ENSG00000066294.15|CD84 molecule
hg38_v1_chr5_+_69492767_69492831	0.541108	GLI3	ENST00000681041.1|OCLN|ENSG00000197822.12|occludin	ENST00000680098.1|OCLN|ENSG00000197822.12|occludin	ENST00000680784.1|OCLN|ENSG00000197822.12|occludin	ENST00000396442.7|OCLN|ENSG00000197822.12|occludin	ENST00000681895.1|OCLN|ENSG00000197822.12|occludin
hg38_v1_chr21_+_41167774_41167801	0.540939	GLI3	ENST00000328735.10|BACE2|ENSG00000182240.16|beta-secretase 2	ENST00000347667.5|BACE2|ENSG00000182240.16|beta-secretase 2
hg38_v1_chr22_+_45163910_45164000	0.540683	GLI3	ENST00000347635.9|NUP50|ENSG00000093000.19|nucleoporin 50	ENST00000407019.6|NUP50|ENSG00000093000.19|nucleoporin 50	ENST00000424634.5|NUP50|ENSG00000093000.19|nucleoporin 50	ENST00000417702.5|NUP50|ENSG00000093000.19|nucleoporin 50	ENST00000430547.5|NUP50|ENSG00000093000.19|nucleoporin 50
hg38_v1_chrX_+_116436599_116436616	0.540504	GLI3	ENST00000598581.3|SLC6A14|ENSG00000268104.3|solute carrier family 6 member 14
hg38_v1_chr1_+_150549384_150549425	0.539348	GLI3	ENST00000369041.9|ADAMTSL4|ENSG00000143382.16|ADAMTS like 4	ENST00000271643.9|ADAMTSL4|ENSG00000143382.16|ADAMTS like 4
hg38_v1_chr16_+_28822982_28823148	0.538927	GLI3	ENST00000336783.9|ATXN2L|ENSG00000168488.19|ataxin 2 like	ENST00000340394.12|ATXN2L|ENSG00000168488.19|ataxin 2 like	ENST00000325215.10|ATXN2L|ENSG00000168488.19|ataxin 2 like	ENST00000382686.8|ATXN2L|ENSG00000168488.19|ataxin 2 like	ENST00000395547.6|ATXN2L|ENSG00000168488.19|ataxin 2 like	ENST00000564304.5|ATXN2L|ENSG00000168488.19|ataxin 2 like
hg38_v1_chr13_+_27251545_27251566	0.538439	GLI3	ENST00000311549.11|RPL21|ENSG00000122026.11|ribosomal protein L21
hg38_v1_chr8_+_30095649_30095673	0.538241	GLI3	ENST00000518192.5|LEPROTL1|ENSG00000104660.19|leptin receptor overlapping transcript like 1
hg38_v1_chr17_-_63842663_63842751	0.538091	GLI3	ENST00000613943.4|SMARCD2|ENSG00000108604.16|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2	ENST00000448276.7|SMARCD2|ENSG00000108604.16|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2
hg38_v1_chr11_+_5691004_5691034	0.537466	GLI3	ENST00000414641.5|TRIM22|ENSG00000132274.16|tripartite motif containing 22
hg38_v1_chr20_+_44714835_44714847	0.536963	GLI3	ENST00000372868.6|CCN5|ENSG00000064205.11|cellular communication network factor 5
hg38_v1_chr7_+_130492066_130492113	0.536674	GLI3	ENST00000223215.10|MEST|ENSG00000106484.16|mesoderm specific transcript	ENST00000437945.6|MEST|ENSG00000106484.16|mesoderm specific transcript
hg38_v1_chr10_-_6062349_6062376	0.536304	GLI3	ENST00000379959.8|IL2RA|ENSG00000134460.18|interleukin 2 receptor subunit alpha
hg38_v1_chr19_-_10568968_10568985	0.535691	GLI3	ENST00000393599.3|CDKN2D|ENSG00000129355.7|cyclin dependent kinase inhibitor 2D
hg38_v1_chr9_-_98255618_98255671	0.532069	GLI3	ENST00000375066.6|TBC1D2|ENSG00000095383.20|TBC1 domain family member 2	ENST00000465784.7|TBC1D2|ENSG00000095383.20|TBC1 domain family member 2
hg38_v1_chr12_-_31324129_31324182	0.531238	GLI3	ENST00000454658.6|SINHCAF|ENSG00000139146.14|SIN3-HDAC complex associated factor
hg38_v1_chr6_-_106975309_106975350	0.530634	GLI3	ENST00000615659.1|CD24|ENSG00000272398.6|CD24 molecule
hg38_v1_chr1_+_150549734_150549839	0.530363	GLI3	ENST00000674043.1|ADAMTSL4|ENSG00000143382.16|ADAMTS like 4	ENST00000674058.1|ADAMTSL4|ENSG00000143382.16|ADAMTS like 4
hg38_v1_chr12_-_54385727_54385785	0.528247	GLI3	ENST00000551109.5|ZNF385A|ENSG00000161642.18|zinc finger protein 385A	ENST00000546970.5|ZNF385A|ENSG00000161642.18|zinc finger protein 385A
hg38_v1_chr18_+_3451647_3451724	0.526913	GLI3	ENST00000345133.9|TGIF1|ENSG00000177426.22|TGFB induced factor homeobox 1	ENST00000330513.10|TGIF1|ENSG00000177426.22|TGFB induced factor homeobox 1	ENST00000549546.5|TGIF1|ENSG00000177426.22|TGFB induced factor homeobox 1
hg38_v1_chr1_+_103655760_103655760	0.526794	GLI3	ENST00000370083.9|AMY1A|ENSG00000237763.10|amylase alpha 1A
hg38_v1_chr12_+_51238854_51238886	0.524153	GLI3	ENST00000549732.6|DAZAP2|ENSG00000183283.16|DAZ associated protein 2	ENST00000604900.5|DAZAP2|ENSG00000183283.16|DAZ associated protein 2
hg38_v1_chr19_+_53869623_53869795	0.521892	GLI3	ENST00000414489.1|MYADM|ENSG00000179820.16|myeloid associated differentiation marker
hg38_v1_chr5_-_67196791_67196808	0.521786	GLI3	ENST00000256447.5|CD180|ENSG00000134061.5|CD180 molecule
hg38_v1_chr17_+_63477052_63477070	0.520661	GLI3	ENST00000290866.10|ACE|ENSG00000159640.17|angiotensin I converting enzyme	ENST00000428043.5|ACE|ENSG00000159640.17|angiotensin I converting enzyme
hg38_v1_chr3_+_186930518_186930586	0.519932	GLI3	ENST00000169298.8|ST6GAL1|ENSG00000073849.16|ST6 beta-galactoside alpha-2,6-sialyltransferase 1	ENST00000457772.6|ST6GAL1|ENSG00000073849.16|ST6 beta-galactoside alpha-2,6-sialyltransferase 1	ENST00000455441.5|ST6GAL1|ENSG00000073849.16|ST6 beta-galactoside alpha-2,6-sialyltransferase 1	ENST00000427315.5|ST6GAL1|ENSG00000073849.16|ST6 beta-galactoside alpha-2,6-sialyltransferase 1
hg38_v1_chr11_+_102047422_102047467	0.518348	GLI3	ENST00000434758.7|CFAP300|ENSG00000137691.13|cilia and flagella associated protein 300	ENST00000526781.5|CFAP300|ENSG00000137691.13|cilia and flagella associated protein 300	ENST00000534360.1|CFAP300|ENSG00000137691.13|cilia and flagella associated protein 300
hg38_v1_chr19_+_50358571_50358611	0.517462	GLI3	ENST00000652203.1|NR1H2|ENSG00000131408.15|nuclear receptor subfamily 1 group H member 2
hg38_v1_chr17_+_82235769_82235778	0.516489	GLI3	ENST00000619321.2|SLC16A3|ENSG00000141526.18|solute carrier family 16 member 3
hg38_v1_chr11_-_65862026_65862056	0.51602	GLI3	ENST00000532134.5|CFL1|ENSG00000172757.13|cofilin 1
hg38_v1_chr17_+_62627628_62627752	0.514709	GLI3	ENST00000303375.10|MRC2|ENSG00000011028.14|mannose receptor C type 2
hg38_v1_chr9_+_6758133_6758161	0.513816	GLI3	ENST00000543771.5|KDM4C|ENSG00000107077.19|lysine demethylase 4C
hg38_v1_chr20_+_63554142_63554165	0.511597	GLI3	ENST00000370097.2|FNDC11|ENSG00000125531.7|fibronectin type III domain containing 11
hg38_v1_chr9_+_132410183_132410237	0.511387	GLI3	ENST00000393216.3|CFAP77|ENSG00000188523.9|cilia and flagella associated protein 77	ENST00000343036.6|CFAP77|ENSG00000188523.9|cilia and flagella associated protein 77
hg38_v1_chr17_-_64506281_64506294	0.511199	GLI3	ENST00000225792.10|DDX5|ENSG00000108654.16|DEAD-box helicase 5	ENST00000585060.5|DDX5|ENSG00000108654.16|DEAD-box helicase 5
hg38_v1_chr17_-_13601901_13601982	0.510513	GLI3	ENST00000284110.2|HS3ST3A1|ENSG00000153976.3|heparan sulfate-glucosamine 3-sulfotransferase 3A1
hg38_v1_chr3_-_177197157_177197192	0.507056	GLI3	ENST00000630833.2|TBL1XR1|ENSG00000177565.18|TBL1X receptor 1	ENST00000450267.5|TBL1XR1|ENSG00000177565.18|TBL1X receptor 1	ENST00000431674.5|TBL1XR1|ENSG00000177565.18|TBL1X receptor 1
hg38_v1_chr1_+_1632152_1632210	0.505088	GLI3	ENST00000472264.1|MMP23B|ENSG00000189409.14|matrix metallopeptidase 23B	ENST00000356026.10|MMP23B|ENSG00000189409.14|matrix metallopeptidase 23B	ENST00000378675.7|MMP23B|ENSG00000189409.14|matrix metallopeptidase 23B
hg38_v1_chr12_-_120224695_120224757	0.504571	GLI3	ENST00000552550.5|PXN|ENSG00000089159.17|paxillin
hg38_v1_chr12_-_108320635_108320667	0.504508	GLI3	ENST00000412676.5|CMKLR1|ENSG00000174600.14|chemerin chemokine-like receptor 1	ENST00000550573.5|CMKLR1|ENSG00000174600.14|chemerin chemokine-like receptor 1
hg38_v1_chr11_+_125594861_125594868	0.504006	GLI3	ENST00000529886.1|STT3A|ENSG00000134910.14|STT3 oligosaccharyltransferase complex catalytic subunit A
hg38_v1_chr3_+_11272413_11272437	0.503251	GLI3	ENST00000446450.6|ATG7|ENSG00000197548.12|autophagy related 7	ENST00000354956.9|ATG7|ENSG00000197548.12|autophagy related 7	ENST00000354449.7|ATG7|ENSG00000197548.12|autophagy related 7	ENST00000419112.5|ATG7|ENSG00000197548.12|autophagy related 7
hg38_v1_chr1_+_8945858_8945887	0.502857	GLI3	ENST00000549778.5|CA6|ENSG00000131686.15|carbonic anhydrase 6	ENST00000377443.7|CA6|ENSG00000131686.15|carbonic anhydrase 6	ENST00000480186.7|CA6|ENSG00000131686.15|carbonic anhydrase 6	ENST00000377436.6|CA6|ENSG00000131686.15|carbonic anhydrase 6	ENST00000377442.3|CA6|ENSG00000131686.15|carbonic anhydrase 6
hg38_v1_chr15_+_45129933_45130018	0.502462	GLI3	ENST00000321429.8|DUOX1|ENSG00000137857.18|dual oxidase 1	ENST00000389037.7|DUOX1|ENSG00000137857.18|dual oxidase 1	ENST00000558322.5|DUOX1|ENSG00000137857.18|dual oxidase 1
hg38_v1_chr8_+_22245125_22245235	0.502192	GLI3	ENST00000306433.9|POLR3D|ENSG00000168495.13|RNA polymerase III subunit D	ENST00000519237.5|POLR3D|ENSG00000168495.13|RNA polymerase III subunit D	ENST00000397802.8|POLR3D|ENSG00000168495.13|RNA polymerase III subunit D
hg38_v1_chr20_+_37346128_37346149	0.500699	GLI3	ENST00000373578.7|SRC|ENSG00000197122.12|SRC proto-oncogene, non-receptor tyrosine kinase
hg38_v1_chr8_+_109362453_109362531	0.500101	GLI3	ENST00000378402.10|PKHD1L1|ENSG00000205038.12|PKHD1 like 1
hg38_v1_chr12_-_108598002_108598024	0.499921	GLI3	ENST00000549447.1|TMEM119|ENSG00000183160.9|transmembrane protein 119
hg38_v1_chrX_-_20218941_20218959	0.499584	GLI3	ENST00000457145.6|RPS6KA3|ENSG00000177189.14|ribosomal protein S6 kinase A3
hg38_v1_chr19_+_44662278_44662278	0.498485	GLI3	ENST00000622237.4|CEACAM19|ENSG00000186567.13|CEA cell adhesion molecule 19	ENST00000618372.4|CEACAM19|ENSG00000186567.13|CEA cell adhesion molecule 19	ENST00000619799.4|CEACAM19|ENSG00000186567.13|CEA cell adhesion molecule 19	ENST00000592789.5|CEACAM19|ENSG00000186567.13|CEA cell adhesion molecule 19	ENST00000591979.1|CEACAM19|ENSG00000186567.13|CEA cell adhesion molecule 19
hg38_v1_chr19_+_1275508_1275587	0.494631	GLI3	ENST00000409293.6|FAM174C|ENSG00000228300.14|family with sequence similarity 174 member C
hg38_v1_chr12_+_64610511_64610526	0.492601	GLI3	ENST00000336061.2|RASSF3|ENSG00000153179.13|Ras association domain family member 3
hg38_v1_chr16_+_56657924_56657967	0.491573	GLI3	ENST00000334350.7|MT1F|ENSG00000198417.7|metallothionein 1F
hg38_v1_chr1_+_150549369_150549379	0.491387	GLI3	ENST00000369039.9|ADAMTSL4|ENSG00000143382.16|ADAMTS like 4
hg38_v1_chr6_+_142301926_142302124	0.488986	GLI3	ENST00000296932.13|ADGRG6|ENSG00000112414.15|adhesion G protein-coupled receptor G6	ENST00000367609.8|ADGRG6|ENSG00000112414.15|adhesion G protein-coupled receptor G6
hg38_v1_chr17_-_75844533_75844564	0.487683	GLI3	ENST00000586108.1|UNC13D|ENSG00000092929.12|unc-13 homolog D
hg38_v1_chr8_+_30095400_30095501	0.487361	GLI3	ENST00000321250.13|LEPROTL1|ENSG00000104660.19|leptin receptor overlapping transcript like 1	ENST00000518001.1|LEPROTL1|ENSG00000104660.19|leptin receptor overlapping transcript like 1	ENST00000520682.5|LEPROTL1|ENSG00000104660.19|leptin receptor overlapping transcript like 1	ENST00000442880.6|LEPROTL1|ENSG00000104660.19|leptin receptor overlapping transcript like 1	ENST00000523116.5|LEPROTL1|ENSG00000104660.19|leptin receptor overlapping transcript like 1
hg38_v1_chrX_+_23667461_23667564	0.486294	GLI3	ENST00000379341.9|PRDX4|ENSG00000123131.13|peroxiredoxin 4	ENST00000379331.3|PRDX4|ENSG00000123131.13|peroxiredoxin 4
hg38_v1_chr9_-_93134234_93134258	0.486205	GLI3	ENST00000375446.5|NINJ1|ENSG00000131669.10|ninjurin 1
hg38_v1_chr17_+_74274241_74274281	0.483508	GLI3	ENST00000582036.5|DNAI2|ENSG00000171595.14|dynein axonemal intermediate chain 2
hg38_v1_chr15_+_74788542_74788549	0.4822	GLI3	ENST00000567571.5|CSK|ENSG00000103653.17|C-terminal Src kinase
hg38_v1_chr1_-_34985288_34985353	0.481877	GLI3	ENST00000417456.1|ENSG00000284773.1|ENSG00000284773.1|novel protein	ENST00000373337.3|TMEM35B|ENSG00000243749.1|transmembrane protein 35B
hg38_v1_chr17_+_77127865_77127882	0.480884	GLI3	ENST00000586429.5|SEC14L1|ENSG00000129657.16|SEC14 like lipid binding 1
hg38_v1_chr21_-_17612911_17612945	0.480677	GLI3	ENST00000457956.1|BTG3|ENSG00000154640.15|BTG anti-proliferation factor 3
hg38_v1_chr14_+_21924033_21924063	0.478673	GLI3	ENST00000390440.2|TRAV14DV4|ENSG00000211792.2|T cell receptor alpha variable 14/delta variable 4
hg38_v1_chr12_-_110445540_110445587	0.478218	GLI3	ENST00000547365.1|ARPC3|ENSG00000111229.16|actin related protein 2/3 complex subunit 3
hg38_v1_chr9_+_32552305_32552346	0.477318	GLI3	ENST00000451672.2|SMIM27|ENSG00000235453.11|small integral membrane protein 27	ENST00000644531.1|SMIM27|ENSG00000235453.11|small integral membrane protein 27
hg38_v1_chr16_+_27427242_27427261	0.476196	GLI3	ENST00000395754.4|IL21R|ENSG00000103522.16|interleukin 21 receptor
hg38_v1_chr19_-_10102659_10102685	0.472699	GLI3	ENST00000592641.5|ANGPTL6|ENSG00000130812.11|angiopoietin like 6	ENST00000253109.5|ANGPTL6|ENSG00000130812.11|angiopoietin like 6
hg38_v1_chr11_-_64742937_64742973	0.471761	GLI3	ENST00000394428.5|RASGRP2|ENSG00000068831.19|RAS guanyl releasing protein 2	ENST00000394429.5|RASGRP2|ENSG00000068831.19|RAS guanyl releasing protein 2
hg38_v1_chr6_+_89080739_89080761	0.47086	GLI3	ENST00000369472.1|PNRC1|ENSG00000146278.11|proline rich nuclear receptor coactivator 1	ENST00000336032.4|PNRC1|ENSG00000146278.11|proline rich nuclear receptor coactivator 1
hg38_v1_chr9_-_95317671_95317727	0.469733	GLI3	ENST00000490972.7|FANCC|ENSG00000158169.13|FA complementation group C	ENST00000647778.1|FANCC|ENSG00000158169.13|FA complementation group C	ENST00000649611.1|FANCC|ENSG00000158169.13|FA complementation group C	ENST00000289081.8|FANCC|ENSG00000158169.13|FA complementation group C
hg38_v1_chr21_-_17612842_17612910	0.469612	GLI3	ENST00000339775.10|BTG3|ENSG00000154640.15|BTG anti-proliferation factor 3	ENST00000348354.7|BTG3|ENSG00000154640.15|BTG anti-proliferation factor 3
hg38_v1_chr15_+_90884461_90884481	0.469248	GLI3	ENST00000559355.5|FES|ENSG00000182511.12|FES proto-oncogene, tyrosine kinase	ENST00000394302.5|FES|ENSG00000182511.12|FES proto-oncogene, tyrosine kinase
hg38_v1_chr12_+_64610458_64610505	0.467659	GLI3	ENST00000542104.6|RASSF3|ENSG00000153179.13|Ras association domain family member 3
hg38_v1_chr11_+_66070256_66070395	0.467607	GLI3	ENST00000320580.9|PACS1|ENSG00000175115.13|phosphofurin acidic cluster sorting protein 1
hg38_v1_chr5_-_39270623_39270669	0.467262	GLI3	ENST00000512138.1|FYB1|ENSG00000082074.19|FYN binding protein 1	ENST00000646045.2|FYB1|ENSG00000082074.19|FYN binding protein 1
hg38_v1_chr5_-_10761156_10761283	0.46707	GLI3	ENST00000432074.2|DAP|ENSG00000112977.16|death associated protein	ENST00000230895.11|DAP|ENSG00000112977.16|death associated protein
hg38_v1_chr15_+_88621290_88621370	0.466461	GLI3	ENST00000332810.4|AEN|ENSG00000181026.15|apoptosis enhancing nuclease	ENST00000559528.1|AEN|ENSG00000181026.15|apoptosis enhancing nuclease
hg38_v1_chr11_+_124865425_124865465	0.464796	GLI3	ENST00000397801.6|ROBO3|ENSG00000154134.15|roundabout guidance receptor 3
hg38_v1_chr19_-_51026593_51026633	0.458775	GLI3	ENST00000600362.5|KLK11|ENSG00000167757.14|kallikrein related peptidase 11	ENST00000453757.8|KLK11|ENSG00000167757.14|kallikrein related peptidase 11	ENST00000601671.1|KLK11|ENSG00000167757.14|kallikrein related peptidase 11
hg38_v1_chr17_-_63842918_63843065	0.455965	GLI3	ENST00000577990.1|SMARCD2|ENSG00000108604.16|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2
hg38_v1_chr19_-_45602153_45602223	0.455726	GLI3	ENST00000544371.1|OPA3|ENSG00000125741.5|outer mitochondrial membrane lipid metabolism regulator OPA3	ENST00000323040.5|GPR4|ENSG00000177464.5|G protein-coupled receptor 4
hg38_v1_chr9_-_120914549_120914587	0.455233	GLI3	ENST00000546084.5|TRAF1|ENSG00000056558.11|TNF receptor associated factor 1
hg38_v1_chr8_+_23246606_23246671	0.454503	GLI3	ENST00000519984.1|CHMP7|ENSG00000147457.14|charged multivesicular body protein 7
hg38_v1_chr16_+_30200729_30200729	0.453507	GLI3	ENST00000563322.5|SULT1A3|ENSG00000261052.6|sulfotransferase family 1A member 3
hg38_v1_chr17_+_4833331_4833425	0.453358	GLI3	ENST00000355280.11|MINK1|ENSG00000141503.17|misshapen like kinase 1	ENST00000347992.11|MINK1|ENSG00000141503.17|misshapen like kinase 1
hg38_v1_chr20_-_1325707_1325723	0.45204	GLI3	ENST00000381812.5|SDCBP2|ENSG00000125775.15|syndecan binding protein 2
hg38_v1_chr17_-_28549333_28549399	0.451899	GLI3	ENST00000470125.5|UNC119|ENSG00000109103.12|unc-119 lipid binding chaperone
hg38_v1_chr17_-_42683057_42683070	0.450141	GLI3	ENST00000591765.1|CCR10|ENSG00000184451.5|C-C motif chemokine receptor 10
hg38_v1_chr17_-_82450716_82450829	0.44777	GLI3	ENST00000583617.5|CYBC1|ENSG00000178927.18|cytochrome b-245 chaperone 1	ENST00000578913.5|CYBC1|ENSG00000178927.18|cytochrome b-245 chaperone 1	ENST00000580560.5|CYBC1|ENSG00000178927.18|cytochrome b-245 chaperone 1	ENST00000584503.5|CYBC1|ENSG00000178927.18|cytochrome b-245 chaperone 1	ENST00000577834.5|CYBC1|ENSG00000178927.18|cytochrome b-245 chaperone 1	ENST00000584891.5|CYBC1|ENSG00000178927.18|cytochrome b-245 chaperone 1	ENST00000306645.10|CYBC1|ENSG00000178927.18|cytochrome b-245 chaperone 1	ENST00000342572.12|CYBC1|ENSG00000178927.18|cytochrome b-245 chaperone 1	ENST00000585064.5|CYBC1|ENSG00000178927.18|cytochrome b-245 chaperone 1	ENST00000585080.5|CYBC1|ENSG00000178927.18|cytochrome b-245 chaperone 1	ENST00000578919.5|CYBC1|ENSG00000178927.18|cytochrome b-245 chaperone 1	ENST00000434650.6|CYBC1|ENSG00000178927.18|cytochrome b-245 chaperone 1	ENST00000581196.5|CYBC1|ENSG00000178927.18|cytochrome b-245 chaperone 1
hg38_v1_chr12_-_7109176_7109278	0.447591	GLI3	ENST00000545280.5|C1RL|ENSG00000139178.12|complement C1r subcomponent like	ENST00000543933.5|C1RL|ENSG00000139178.12|complement C1r subcomponent like	ENST00000545337.1|C1RL|ENSG00000139178.12|complement C1r subcomponent like	ENST00000266542.9|C1RL|ENSG00000139178.12|complement C1r subcomponent like	ENST00000544702.5|C1RL|ENSG00000139178.12|complement C1r subcomponent like
hg38_v1_chr4_+_26857678_26857770	0.445067	GLI3	ENST00000494628.6|STIM2|ENSG00000109689.19|stromal interaction molecule 2
hg38_v1_chr3_-_39154558_39154571	0.443217	GLI3	ENST00000514182.1|CSRNP1|ENSG00000144655.15|cysteine and serine rich nuclear protein 1
hg38_v1_chr17_-_81869934_81870006	0.441554	GLI3	ENST00000580685.5|ARHGDIA|ENSG00000141522.12|Rho GDP dissociation inhibitor alpha
hg38_v1_chr1_+_26545833_26545880	0.440894	GLI3	ENST00000531382.5|RPS6KA1|ENSG00000117676.14|ribosomal protein S6 kinase A1
hg38_v1_chr16_+_57413861_57413877	0.439336	GLI3	ENST00000616880.1|CCL17|ENSG00000102970.11|C-C motif chemokine ligand 17
hg38_v1_chr5_+_140664896_140664914	0.436829	GLI3	ENST00000358337.10|WDR55|ENSG00000120314.19|WD repeat domain 55
hg38_v1_chr3_-_32502783_32502865	0.43599	GLI3	ENST00000205636.4|CMTM6|ENSG00000091317.8|CKLF like MARVEL transmembrane domain containing 6
hg38_v1_chr5_-_178232537_178232630	0.435396	GLI3	ENST00000476170.2|PHYKPL|ENSG00000175309.15|5-phosphohydroxy-L-lysine phospho-lyase	ENST00000323594.8|PHYKPL|ENSG00000175309.15|5-phosphohydroxy-L-lysine phospho-lyase
hg38_v1_chrX_+_17737443_17737498	0.43518	GLI3	ENST00000398080.5|SCML1|ENSG00000047634.15|Scm polycomb group protein like 1	ENST00000380045.7|SCML1|ENSG00000047634.15|Scm polycomb group protein like 1	ENST00000380043.7|SCML1|ENSG00000047634.15|Scm polycomb group protein like 1	ENST00000380041.8|SCML1|ENSG00000047634.15|Scm polycomb group protein like 1
hg38_v1_chr4_-_89837106_89837310	0.433782	GLI3	ENST00000394986.5|SNCA|ENSG00000145335.17|synuclein alpha	ENST00000394991.8|SNCA|ENSG00000145335.17|synuclein alpha	ENST00000506244.5|SNCA|ENSG00000145335.17|synuclein alpha	ENST00000394989.6|SNCA|ENSG00000145335.17|synuclein alpha	ENST00000673902.1|SNCA|ENSG00000145335.17|synuclein alpha	ENST00000674129.1|SNCA|ENSG00000145335.17|synuclein alpha
hg38_v1_chr15_+_94231538_94231601	0.433433	GLI3	ENST00000543482.5|MCTP2|ENSG00000140563.15|multiple C2 and transmembrane domain containing 2
hg38_v1_chr3_-_119559599_119559632	0.433093	GLI3	ENST00000264246.8|CD80|ENSG00000121594.12|CD80 molecule
hg38_v1_chr3_-_12841527_12841587	0.432997	GLI3	ENST00000396953.6|RPL32|ENSG00000144713.13|ribosomal protein L32	ENST00000457131.1|RPL32|ENSG00000144713.13|ribosomal protein L32	ENST00000435983.5|RPL32|ENSG00000144713.13|ribosomal protein L32	ENST00000273223.10|RPL32|ENSG00000144713.13|ribosomal protein L32	ENST00000429711.7|RPL32|ENSG00000144713.13|ribosomal protein L32	ENST00000396957.5|RPL32|ENSG00000144713.13|ribosomal protein L32
hg38_v1_chr17_-_78925376_78925398	0.43195	GLI3	ENST00000262768.11|TIMP2|ENSG00000035862.12|TIMP metallopeptidase inhibitor 2
hg38_v1_chr3_-_136196305_136196352	0.431941	GLI3	ENST00000473093.1|MSL2|ENSG00000174579.4|MSL complex subunit 2	ENST00000309993.3|MSL2|ENSG00000174579.4|MSL complex subunit 2
hg38_v1_chr11_-_407103_407196	0.431309	GLI3	ENST00000526395.5|SIGIRR|ENSG00000185187.13|single Ig and TIR domain containing
hg38_v1_chr17_+_76726948_76726965	0.431146	GLI3	ENST00000586200.1|METTL23|ENSG00000181038.14|methyltransferase like 23
hg38_v1_chr4_-_121227461_121227472	0.430855	GLI3	ENST00000509841.1|TNIP3|ENSG00000050730.16|TNFAIP3 interacting protein 3
hg38_v1_chr12_-_10454485_10454685	0.428379	GLI3	ENST00000408006.7|KLRC1|ENSG00000134545.14|killer cell lectin like receptor C1	ENST00000544822.2|KLRC1|ENSG00000134545.14|killer cell lectin like receptor C1	ENST00000536188.5|KLRC1|ENSG00000134545.14|killer cell lectin like receptor C1
hg38_v1_chr19_-_55384259_55384305	0.427676	GLI3	ENST00000444469.4|TMEM238|ENSG00000233493.4|transmembrane protein 238
hg38_v1_chr19_+_53869384_53869406	0.426562	GLI3	ENST00000391769.2|MYADM|ENSG00000179820.16|myeloid associated differentiation marker
hg38_v1_chr6_+_42916046_42916066	0.426198	GLI3	ENST00000304672.6|PTCRA|ENSG00000171611.10|pre T cell antigen receptor alpha
hg38_v1_chr19_+_51124906_51124908	0.42506	GLI3	ENST00000250360.8|SIGLEC9|ENSG00000129450.9|sialic acid binding Ig like lectin 9	ENST00000440804.7|SIGLEC9|ENSG00000129450.9|sialic acid binding Ig like lectin 9
hg38_v1_chr10_+_17228515_17228611	0.422545	GLI3	ENST00000478746.1|VIM|ENSG00000026025.16|vimentin
hg38_v1_chr15_+_64911869_64911919	0.42254	GLI3	ENST00000319580.13|ANKDD1A|ENSG00000166839.17|ankyrin repeat and death domain containing 1A	ENST00000496660.5|ANKDD1A|ENSG00000166839.17|ankyrin repeat and death domain containing 1A
hg38_v1_chr22_+_44668547_44668611	0.422402	GLI3	ENST00000611394.4|PRR5|ENSG00000186654.21|proline rich 5	ENST00000617066.4|PRR5|ENSG00000186654.21|proline rich 5
hg38_v1_chr22_+_39040857_39040885	0.421398	GLI3	ENST00000381565.2|APOBEC3F|ENSG00000128394.17|apolipoprotein B mRNA editing enzyme catalytic subunit 3F	ENST00000308521.10|APOBEC3F|ENSG00000128394.17|apolipoprotein B mRNA editing enzyme catalytic subunit 3F
hg38_v1_chr3_-_119559529_119559556	0.420503	GLI3	ENST00000478182.5|CD80|ENSG00000121594.12|CD80 molecule
hg38_v1_chr7_+_100356601_100356750	0.419761	GLI3	ENST00000608825.1|PILRB|ENSG00000121716.20|paired immunoglobin like type 2 receptor beta
hg38_v1_chr15_+_90884429_90884451	0.419444	GLI3	ENST00000414248.6|FES|ENSG00000182511.12|FES proto-oncogene, tyrosine kinase
hg38_v1_chr9_+_133534807_133534853	0.41901	GLI3	ENST00000393060.1|ADAMTSL2|ENSG00000197859.11|ADAMTS like 2
hg38_v1_chr20_-_1325746_1325869	0.417014	GLI3	ENST00000339987.7|SDCBP2|ENSG00000125775.15|syndecan binding protein 2
hg38_v1_chr9_-_120714457_120714531	0.416193	GLI3	ENST00000373930.4|MEGF9|ENSG00000106780.9|multiple EGF like domains 9
hg38_v1_chrX_+_15507302_15507318	0.414975	GLI3	ENST00000342014.6|BMX|ENSG00000102010.15|BMX non-receptor tyrosine kinase
hg38_v1_chr1_+_167721954_167722152	0.413605	GLI3	ENST00000359523.7|MPZL1|ENSG00000197965.12|myelin protein zero like 1	ENST00000392121.7|MPZL1|ENSG00000197965.12|myelin protein zero like 1	ENST00000474859.5|MPZL1|ENSG00000197965.12|myelin protein zero like 1
hg38_v1_chr5_-_80256019_80256035	0.413308	GLI3	ENST00000509193.5|SERINC5|ENSG00000164300.17|serine incorporator 5
hg38_v1_chr19_-_11578988_11579008	0.413177	GLI3	ENST00000591319.1|ACP5|ENSG00000102575.13|acid phosphatase 5, tartrate resistant
hg38_v1_chr20_+_45469745_45469761	0.412187	GLI3	ENST00000372676.8|WFDC2|ENSG00000101443.18|WAP four-disulfide core domain 2	ENST00000217425.9|WFDC2|ENSG00000101443.18|WAP four-disulfide core domain 2	ENST00000339946.7|WFDC2|ENSG00000101443.18|WAP four-disulfide core domain 2
hg38_v1_chr9_+_128456418_128456473	0.410576	GLI3	ENST00000434106.7|ODF2|ENSG00000136811.16|outer dense fiber of sperm tails 2	ENST00000546203.5|ODF2|ENSG00000136811.16|outer dense fiber of sperm tails 2	ENST00000446274.5|ODF2|ENSG00000136811.16|outer dense fiber of sperm tails 2	ENST00000421776.6|ODF2|ENSG00000136811.16|outer dense fiber of sperm tails 2	ENST00000432065.6|ODF2|ENSG00000136811.16|outer dense fiber of sperm tails 2
hg38_v1_chr7_+_48171451_48171466	0.410509	GLI3	ENST00000435803.6|ABCA13|ENSG00000179869.15|ATP binding cassette subfamily A member 13
hg38_v1_chr4_+_2793056_2793076	0.409945	GLI3	ENST00000503219.5|SH3BP2|ENSG00000087266.17|SH3 domain binding protein 2
hg38_v1_chr16_+_31033781_31033805	0.408881	GLI3	ENST00000613541.1|STX4|ENSG00000103496.15|syntaxin 4
hg38_v1_chr10_+_49679637_49679688	0.408048	GLI3	ENST00000374113.3|C10orf53|ENSG00000178645.13|chromosome 10 open reading frame 53	ENST00000374111.8|C10orf53|ENSG00000178645.13|chromosome 10 open reading frame 53	ENST00000374112.7|C10orf53|ENSG00000178645.13|chromosome 10 open reading frame 53	ENST00000535836.1|C10orf53|ENSG00000178645.13|chromosome 10 open reading frame 53
hg38_v1_chr15_+_45645881_45645907	0.40769	GLI3	ENST00000561493.5|SQOR|ENSG00000137767.14|sulfide quinone oxidoreductase
hg38_v1_chr17_-_68601357_68601375	0.407678	GLI3	ENST00000592554.2|FAM20A|ENSG00000108950.12|FAM20A golgi associated secretory pathway pseudokinase
hg38_v1_chr9_-_98255553_98255580	0.407432	GLI3	ENST00000375064.5|TBC1D2|ENSG00000095383.20|TBC1 domain family member 2
hg38_v1_chr3_-_195811857_195811883	0.405965	GLI3	ENST00000349607.8|MUC4|ENSG00000145113.22|mucin 4, cell surface associated	ENST00000346145.8|MUC4|ENSG00000145113.22|mucin 4, cell surface associated
hg38_v1_chr9_-_98255589_98255615	0.405818	GLI3	ENST00000342112.9|TBC1D2|ENSG00000095383.20|TBC1 domain family member 2
hg38_v1_chr2_-_74421560_74421654	0.405011	GLI3	ENST00000612891.4|C2orf81|ENSG00000284308.2|chromosome 2 open reading frame 81	ENST00000640331.1|C2orf81|ENSG00000284308.2|chromosome 2 open reading frame 81	ENST00000684111.1|C2orf81|ENSG00000284308.2|chromosome 2 open reading frame 81
hg38_v1_chr11_+_31816266_31816607	0.404911	GLI3	ENST00000644607.1|PAUPAR|ENSG00000281880.2|PAX6 upstream antisense RNA	ENST00000646221.1|PAUPAR|ENSG00000281880.2|PAX6 upstream antisense RNA	ENST00000532942.5|ENSG00000285283.1|ENSG00000285283.1|novel protein	ENST00000643671.1|PAUPAR|ENSG00000281880.2|PAX6 upstream antisense RNA	ENST00000643931.1|PAUPAR|ENSG00000281880.2|PAX6 upstream antisense RNA	ENST00000642614.1|PAUPAR|ENSG00000281880.2|PAX6 upstream antisense RNA	ENST00000642818.1|PAUPAR|ENSG00000281880.2|PAX6 upstream antisense RNA	ENST00000645848.1|PAUPAR|ENSG00000281880.2|PAX6 upstream antisense RNA	ENST00000506388.2|PAUPAR|ENSG00000281880.2|PAX6 upstream antisense RNA	ENST00000645824.1|PAUPAR|ENSG00000281880.2|PAX6 upstream antisense RNA
hg38_v1_chr1_+_179294173_179294320	0.402789	GLI3	ENST00000426956.1|SOAT1|ENSG00000057252.13|sterol O-acyltransferase 1
hg38_v1_chr2_+_130356036_130356070	0.401128	GLI3	ENST00000347849.7|PTPN18|ENSG00000072135.13|protein tyrosine phosphatase non-receptor type 18	ENST00000175756.10|PTPN18|ENSG00000072135.13|protein tyrosine phosphatase non-receptor type 18
hg38_v1_chr9_+_87497852_87497893	0.400897	GLI3	ENST00000408954.8|DAPK1|ENSG00000196730.13|death associated protein kinase 1
hg38_v1_chr1_-_151993822_151993872	0.400531	GLI3	ENST00000368811.8|S100A10|ENSG00000197747.9|S100 calcium binding protein A10
hg38_v1_chr5_-_176416222_176416261	0.400055	GLI3	ENST00000508425.5|CLTB|ENSG00000175416.16|clathrin light chain B
hg38_v1_chrX_-_154374623_154374645	0.398428	GLI3	ENST00000369850.10|FLNA|ENSG00000196924.19|filamin A
hg38_v1_chr2_-_130509287_130509328	0.397825	GLI3	ENST00000615053.3|POTEI|ENSG00000196834.13|POTE ankyrin domain family member I	ENST00000631234.1|POTEI|ENSG00000196834.13|POTE ankyrin domain family member I	ENST00000451531.7|POTEI|ENSG00000196834.13|POTE ankyrin domain family member I
hg38_v1_chr22_-_31292445_31292534	0.396327	GLI3	ENST00000402249.7|PIK3IP1|ENSG00000100100.13|phosphoinositide-3-kinase interacting protein 1	ENST00000215912.10|PIK3IP1|ENSG00000100100.13|phosphoinositide-3-kinase interacting protein 1	ENST00000443175.1|PIK3IP1|ENSG00000100100.13|phosphoinositide-3-kinase interacting protein 1	ENST00000441972.5|PIK3IP1|ENSG00000100100.13|phosphoinositide-3-kinase interacting protein 1
hg38_v1_chr17_-_28951443_28951606	0.393551	GLI3	ENST00000268756.7|PHF12|ENSG00000109118.14|PHD finger protein 12	ENST00000332830.9|PHF12|ENSG00000109118.14|PHD finger protein 12	ENST00000584685.1|PHF12|ENSG00000109118.14|PHD finger protein 12
hg38_v1_chr16_-_88856909_88856981	0.393159	GLI3	ENST00000569433.1|GALNS|ENSG00000141012.13|galactosamine (N-acetyl)-6-sulfatase	ENST00000268695.10|GALNS|ENSG00000141012.13|galactosamine (N-acetyl)-6-sulfatase	ENST00000568311.1|GALNS|ENSG00000141012.13|galactosamine (N-acetyl)-6-sulfatase
hg38_v1_chr21_+_46111434_46111477	0.392144	GLI3	ENST00000397763.5|COL6A2|ENSG00000142173.16|collagen type VI alpha 2 chain	ENST00000409416.6|COL6A2|ENSG00000142173.16|collagen type VI alpha 2 chain
hg38_v1_chr19_+_19405655_19405683	0.390159	GLI3	ENST00000683918.1|GATAD2A|ENSG00000167491.18|GATA zinc finger domain containing 2A
hg38_v1_chr13_-_113974062_113974079	0.38842	GLI3	ENST00000636427.3|C13orf46|ENSG00000283199.3|chromosome 13 open reading frame 46
hg38_v1_chr7_-_38330935_38330990	0.387326	GLI3	ENST00000390343.2|TRGV8|ENSG00000211696.2|T cell receptor gamma variable 8
hg38_v1_chr1_-_86396253_86396342	0.385779	GLI3	ENST00000394733.2|ODF2L|ENSG00000122417.15|outer dense fiber of sperm tails 2 like	ENST00000359242.7|ODF2L|ENSG00000122417.15|outer dense fiber of sperm tails 2 like	ENST00000294678.6|ODF2L|ENSG00000122417.15|outer dense fiber of sperm tails 2 like	ENST00000479890.5|ODF2L|ENSG00000122417.15|outer dense fiber of sperm tails 2 like	ENST00000478286.2|ODF2L|ENSG00000122417.15|outer dense fiber of sperm tails 2 like	ENST00000370566.7|ODF2L|ENSG00000122417.15|outer dense fiber of sperm tails 2 like	ENST00000317336.11|ODF2L|ENSG00000122417.15|outer dense fiber of sperm tails 2 like
hg38_v1_chr1_+_154974672_154974700	0.385418	GLI3	ENST00000308987.6|CKS1B|ENSG00000173207.13|CDC28 protein kinase regulatory subunit 1B	ENST00000368436.1|CKS1B|ENSG00000173207.13|CDC28 protein kinase regulatory subunit 1B
hg38_v1_chr19_+_10106688_10106733	0.383758	GLI3	ENST00000430370.1|PPAN|ENSG00000130810.20|peter pan homolog
hg38_v1_chr19_-_4581755_4581790	0.382485	GLI3	ENST00000676793.1|SEMA6B|ENSG00000167680.17|semaphorin 6B
hg38_v1_chr16_+_84175933_84176009	0.381358	GLI3	ENST00000569735.1|DNAAF1|ENSG00000154099.18|dynein axonemal assembly factor 1
hg38_v1_chr9_+_132410043_132410180	0.381331	GLI3	ENST00000393215.7|CFAP77|ENSG00000188523.9|cilia and flagella associated protein 77
hg38_v1_chr17_-_28951285_28951401	0.38068	GLI3	ENST00000577226.5|PHF12|ENSG00000109118.14|PHD finger protein 12
hg38_v1_chr20_+_63735463_63735463	0.37835	GLI3	ENST00000496820.2|ENSG00000273154.3|ENSG00000273154.3|novel protein, ZGPAT-LIME1 readthrough
hg38_v1_chr16_+_57694788_57694836	0.377728	GLI3	ENST00000569375.5|DRC7|ENSG00000159625.15|dynein regulatory complex subunit 7	ENST00000569167.1|DRC7|ENSG00000159625.15|dynein regulatory complex subunit 7	ENST00000394337.8|DRC7|ENSG00000159625.15|dynein regulatory complex subunit 7	ENST00000360716.8|DRC7|ENSG00000159625.15|dynein regulatory complex subunit 7	ENST00000563126.5|DRC7|ENSG00000159625.15|dynein regulatory complex subunit 7	ENST00000336825.12|DRC7|ENSG00000159625.15|dynein regulatory complex subunit 7
hg38_v1_chr15_-_45129857_45129938	0.376794	GLI3	ENST00000267803.8|DUOXA1|ENSG00000140254.13|dual oxidase maturation factor 1	ENST00000613425.4|DUOXA1|ENSG00000140254.13|dual oxidase maturation factor 1	ENST00000559014.5|DUOXA1|ENSG00000140254.13|dual oxidase maturation factor 1	ENST00000558851.1|DUOXA1|ENSG00000140254.13|dual oxidase maturation factor 1	ENST00000559988.5|DUOXA1|ENSG00000140254.13|dual oxidase maturation factor 1	ENST00000558996.5|DUOXA1|ENSG00000140254.13|dual oxidase maturation factor 1	ENST00000558422.5|DUOXA1|ENSG00000140254.13|dual oxidase maturation factor 1	ENST00000559226.5|DUOXA1|ENSG00000140254.13|dual oxidase maturation factor 1	ENST00000560572.6|DUOXA1|ENSG00000140254.13|dual oxidase maturation factor 1	ENST00000558326.5|DUOXA1|ENSG00000140254.13|dual oxidase maturation factor 1	ENST00000558377.5|DUOXA1|ENSG00000140254.13|dual oxidase maturation factor 1	ENST00000559644.5|DUOXA1|ENSG00000140254.13|dual oxidase maturation factor 1
hg38_v1_chr17_+_77450547_77450604	0.374306	GLI3	ENST00000588958.6|SEPTIN9|ENSG00000184640.20|septin 9	ENST00000586128.5|SEPTIN9|ENSG00000184640.20|septin 9
hg38_v1_chr12_+_53295506_53295565	0.374266	GLI3	ENST00000549759.2|PFDN5|ENSG00000123349.15|prefoldin subunit 5	ENST00000628881.2|PFDN5|ENSG00000123349.15|prefoldin subunit 5	ENST00000351500.7|PFDN5|ENSG00000123349.15|prefoldin subunit 5	ENST00000550846.5|PFDN5|ENSG00000123349.15|prefoldin subunit 5	ENST00000334478.9|PFDN5|ENSG00000123349.15|prefoldin subunit 5	ENST00000547130.6|PFDN5|ENSG00000123349.15|prefoldin subunit 5	ENST00000552742.6|PFDN5|ENSG00000123349.15|prefoldin subunit 5
hg38_v1_chr3_-_49029378_49029452	0.374236	GLI3	ENST00000442157.2|IMPDH2|ENSG00000178035.13|inosine monophosphate dehydrogenase 2	ENST00000326739.9|IMPDH2|ENSG00000178035.13|inosine monophosphate dehydrogenase 2	ENST00000677010.1|IMPDH2|ENSG00000178035.13|inosine monophosphate dehydrogenase 2	ENST00000678724.1|IMPDH2|ENSG00000178035.13|inosine monophosphate dehydrogenase 2	ENST00000429182.6|IMPDH2|ENSG00000178035.13|inosine monophosphate dehydrogenase 2
hg38_v1_chr12_-_7695752_7695786	0.373534	GLI3	ENST00000329913.4|GDF3|ENSG00000184344.4|growth differentiation factor 3
hg38_v1_chr22_+_31496387_31496570	0.373124	GLI3	ENST00000443011.5|SFI1|ENSG00000198089.16|SFI1 centrin binding protein	ENST00000400288.7|SFI1|ENSG00000198089.16|SFI1 centrin binding protein	ENST00000400289.5|SFI1|ENSG00000198089.16|SFI1 centrin binding protein	ENST00000444859.5|SFI1|ENSG00000198089.16|SFI1 centrin binding protein
hg38_v1_chr1_-_161044941_161044998	0.372045	GLI3	ENST00000368020.5|USF1|ENSG00000158773.14|upstream transcription factor 1
hg38_v1_chr17_-_75153826_75153876	0.370164	GLI3	ENST00000481647.5|JPT1|ENSG00000189159.16|Jupiter microtubule associated homolog 1	ENST00000470924.5|JPT1|ENSG00000189159.16|Jupiter microtubule associated homolog 1
hg38_v1_chr10_-_88952763_88952779	0.36926	GLI3	ENST00000224784.10|ACTA2|ENSG00000107796.13|actin alpha 2, smooth muscle
hg38_v1_chr19_-_41928449_41928449	0.369076	GLI3	ENST00000597630.3|ERFL|ENSG00000268041.3|ETS repressor factor like
hg38_v1_chr19_+_17527232_17527246	0.36838	GLI3	ENST00000601861.5|NIBAN3|ENSG00000167483.19|niban apoptosis regulator 3
hg38_v1_chr1_+_207321532_207321662	0.366307	GLI3	ENST00000367063.6|CD55|ENSG00000196352.16|CD55 molecule (Cromer blood group)	ENST00000391921.9|CD55|ENSG00000196352.16|CD55 molecule (Cromer blood group)	ENST00000645323.1|CD55|ENSG00000196352.16|CD55 molecule (Cromer blood group)
hg38_v1_chr9_+_128456135_128456208	0.365522	GLI3	ENST00000604420.5|ODF2|ENSG00000136811.16|outer dense fiber of sperm tails 2	ENST00000448249.7|ODF2|ENSG00000136811.16|outer dense fiber of sperm tails 2	ENST00000393527.7|ODF2|ENSG00000136811.16|outer dense fiber of sperm tails 2
hg38_v1_chr10_-_132331818_132331864	0.36507	GLI3	ENST00000368619.3|STK32C|ENSG00000165752.17|serine/threonine kinase 32C	ENST00000456004.1|STK32C|ENSG00000165752.17|serine/threonine kinase 32C	ENST00000368620.2|STK32C|ENSG00000165752.17|serine/threonine kinase 32C
hg38_v1_chr1_+_179293760_179293851	0.364263	GLI3	ENST00000367619.8|SOAT1|ENSG00000057252.13|sterol O-acyltransferase 1
hg38_v1_chr1_+_181088692_181088710	0.363295	GLI3	ENST00000367577.7|IER5|ENSG00000162783.11|immediate early response 5
hg38_v1_chr1_-_41918858_41918933	0.362797	GLI3	ENST00000372583.6|HIVEP3|ENSG00000127124.16|HIVEP zinc finger 3
hg38_v1_chr2_-_27071628_27071674	0.36255	GLI3	ENST00000447619.5|OST4|ENSG00000228474.6|oligosaccharyltransferase complex subunit 4, non-catalytic	ENST00000429985.1|OST4|ENSG00000228474.6|oligosaccharyltransferase complex subunit 4, non-catalytic	ENST00000456793.2|OST4|ENSG00000228474.6|oligosaccharyltransferase complex subunit 4, non-catalytic
hg38_v1_chr2_+_28981295_28981356	0.362455	GLI3	ENST00000379558.5|TOGARAM2|ENSG00000189350.13|TOG array regulator of axonemal microtubules 2
hg38_v1_chr11_-_59668981_59669056	0.362184	GLI3	ENST00000300146.10|PATL1|ENSG00000166889.14|PAT1 homolog 1, processing body mRNA decay factor
hg38_v1_chr12_+_1691011_1691084	0.361982	GLI3	ENST00000357103.5|ADIPOR2|ENSG00000006831.10|adiponectin receptor 2
hg38_v1_chr6_-_20212403_20212495	0.360743	GLI3	ENST00000324607.8|MBOAT1|ENSG00000172197.11|membrane bound O-acyltransferase domain containing 1
hg38_v1_chr3_-_53046628_53046654	0.36044	GLI3	ENST00000497586.5|SFMBT1|ENSG00000163935.14|Scm like with four mbt domains 1
hg38_v1_chr1_+_16921923_16921940	0.359975	GLI3	ENST00000375541.10|CROCC|ENSG00000058453.17|ciliary rootlet coiled-coil, rootletin
hg38_v1_chr22_+_39021113_39021129	0.357719	GLI3	ENST00000427494.6|APOBEC3D|ENSG00000243811.12|apolipoprotein B mRNA editing enzyme catalytic subunit 3D	ENST00000216099.13|APOBEC3D|ENSG00000243811.12|apolipoprotein B mRNA editing enzyme catalytic subunit 3D
hg38_v1_chr19_-_43781249_43781294	0.35748	GLI3	ENST00000615047.4|KCNN4|ENSG00000104783.14|potassium calcium-activated channel subfamily N member 4
hg38_v1_chr9_+_32551670_32551688	0.357007	GLI3	ENST00000450093.3|SMIM27|ENSG00000235453.11|small integral membrane protein 27
hg38_v1_chr17_+_78214186_78214285	0.356937	GLI3	ENST00000301633.8|BIRC5|ENSG00000089685.15|baculoviral IAP repeat containing 5	ENST00000350051.8|BIRC5|ENSG00000089685.15|baculoviral IAP repeat containing 5	ENST00000374948.6|BIRC5|ENSG00000089685.15|baculoviral IAP repeat containing 5	ENST00000590449.1|BIRC5|ENSG00000089685.15|baculoviral IAP repeat containing 5
hg38_v1_chr18_-_63319987_63320152	0.356893	GLI3	ENST00000398117.1|BCL2|ENSG00000171791.14|BCL2 apoptosis regulator
hg38_v1_chr9_+_69820799_69820823	0.356367	GLI3	ENST00000377197.8|C9orf135|ENSG00000204711.9|chromosome 9 open reading frame 135
hg38_v1_chr5_-_159208066_159208132	0.355567	GLI3	ENST00000519865.5|RNF145|ENSG00000145860.12|ring finger protein 145	ENST00000521606.6|RNF145|ENSG00000145860.12|ring finger protein 145
hg38_v1_chr4_+_987037_987087	0.355217	GLI3	ENST00000502910.5|IDUA|ENSG00000127415.13|alpha-L-iduronidase	ENST00000514224.2|IDUA|ENSG00000127415.13|alpha-L-iduronidase	ENST00000504568.5|IDUA|ENSG00000127415.13|alpha-L-iduronidase
hg38_v1_chr1_+_43933794_43933846	0.354772	GLI3	ENST00000372359.10|ARTN|ENSG00000117407.17|artemin	ENST00000498139.6|ARTN|ENSG00000117407.17|artemin	ENST00000491846.5|ARTN|ENSG00000117407.17|artemin
hg38_v1_chr17_+_42288076_42288172	0.354277	GLI3	ENST00000546010.6|STAT5A|ENSG00000126561.18|signal transducer and activator of transcription 5A
hg38_v1_chr19_+_19668780_19668808	0.353455	GLI3	ENST00000541458.5|ZNF101|ENSG00000181896.12|zinc finger protein 101
hg38_v1_chr20_+_50731571_50731586	0.353121	GLI3	ENST00000371610.7|PARD6B|ENSG00000124171.9|par-6 family cell polarity regulator beta
hg38_v1_chr18_-_21111778_21111824	0.352508	GLI3	ENST00000399799.3|ROCK1|ENSG00000067900.8|Rho associated coiled-coil containing protein kinase 1
hg38_v1_chr11_-_119057185_119057211	0.351946	GLI3	ENST00000614668.4|HYOU1|ENSG00000149428.19|hypoxia up-regulated 1	ENST00000617285.5|HYOU1|ENSG00000149428.19|hypoxia up-regulated 1
hg38_v1_chr16_+_57542672_57542689	0.350245	GLI3	ENST00000615867.4|ADGRG5|ENSG00000159618.16|adhesion G protein-coupled receptor G5	ENST00000340339.4|ADGRG5|ENSG00000159618.16|adhesion G protein-coupled receptor G5
hg38_v1_chr22_+_22214765_22214794	0.349936	GLI3	ENST00000390287.2|IGLV10-54|ENSG00000211642.4|immunoglobulin lambda variable 10-54
hg38_v1_chr5_-_151224069_151224099	0.349789	GLI3	ENST00000355417.7|CCDC69|ENSG00000198624.13|coiled-coil domain containing 69
hg38_v1_chr5_+_154858594_154858688	0.34685	GLI3	ENST00000519430.5|CNOT8|ENSG00000155508.14|CCR4-NOT transcription complex subunit 8	ENST00000520671.5|CNOT8|ENSG00000155508.14|CCR4-NOT transcription complex subunit 8	ENST00000521583.5|CNOT8|ENSG00000155508.14|CCR4-NOT transcription complex subunit 8	ENST00000285896.11|CNOT8|ENSG00000155508.14|CCR4-NOT transcription complex subunit 8	ENST00000518028.5|CNOT8|ENSG00000155508.14|CCR4-NOT transcription complex subunit 8	ENST00000519404.5|CNOT8|ENSG00000155508.14|CCR4-NOT transcription complex subunit 8	ENST00000519394.5|CNOT8|ENSG00000155508.14|CCR4-NOT transcription complex subunit 8	ENST00000518775.5|CNOT8|ENSG00000155508.14|CCR4-NOT transcription complex subunit 8
hg38_v1_chr1_+_19596960_19597059	0.345384	GLI3	ENST00000617872.4|MICOS10|ENSG00000173436.15|mitochondrial contact site and cristae organizing system subunit 10	ENST00000322753.7|MICOS10|ENSG00000173436.15|mitochondrial contact site and cristae organizing system subunit 10	ENST00000602662.1|NBL1|ENSG00000158747.15|NBL1, DAN family BMP antagonist
hg38_v1_chr19_+_41354145_41354180	0.345171	GLI3	ENST00000604123.5|TMEM91|ENSG00000142046.15|transmembrane protein 91
hg38_v1_chr21_-_26845402_26845416	0.34513	GLI3	ENST00000284984.8|ADAMTS1|ENSG00000154734.16|ADAM metallopeptidase with thrombospondin type 1 motif 1	ENST00000676955.1|ADAMTS1|ENSG00000154734.16|ADAM metallopeptidase with thrombospondin type 1 motif 1
hg38_v1_chr5_-_54985579_54985601	0.34368	GLI3	ENST00000381405.5|ESM1|ENSG00000164283.13|endothelial cell specific molecule 1	ENST00000381403.4|ESM1|ENSG00000164283.13|endothelial cell specific molecule 1
hg38_v1_chr8_+_41529212_41529238	0.343623	GLI3	ENST00000520710.5|GINS4|ENSG00000147536.12|GINS complex subunit 4	ENST00000518671.5|GINS4|ENSG00000147536.12|GINS complex subunit 4
hg38_v1_chr19_-_42253888_42253913	0.342709	GLI3	ENST00000593944.5|ERF|ENSG00000105722.10|ETS2 repressor factor
hg38_v1_chr7_+_142424942_142424971	0.342545	GLI3	ENST00000426318.2|TRBV10-2|ENSG00000229769.2|T cell receptor beta variable 10-2
hg38_v1_chr5_-_1345084_1345105	0.34059	GLI3	ENST00000320895.10|CLPTM1L|ENSG00000049656.14|CLPTM1 like
hg38_v1_chr1_+_103656018_103656018	0.339859	GLI3	ENST00000422549.1|AMY1A|ENSG00000237763.10|amylase alpha 1A
hg38_v1_chr16_-_23510389_23510505	0.339748	GLI3	ENST00000562117.1|GGA2|ENSG00000103365.15|golgi associated, gamma adaptin ear containing, ARF binding protein 2	ENST00000567468.5|GGA2|ENSG00000103365.15|golgi associated, gamma adaptin ear containing, ARF binding protein 2	ENST00000562944.5|GGA2|ENSG00000103365.15|golgi associated, gamma adaptin ear containing, ARF binding protein 2	ENST00000309859.8|GGA2|ENSG00000103365.15|golgi associated, gamma adaptin ear containing, ARF binding protein 2
hg38_v1_chr2_-_200864643_200864669	0.338987	GLI3	ENST00000321356.9|CLK1|ENSG00000013441.16|CDC like kinase 1
hg38_v1_chr17_-_35487739_35487815	0.338623	GLI3	ENST00000628453.3|ENSG00000205045.11|ENSG00000205045.11|schlafen family member 12 like
hg38_v1_chr6_+_31706866_31706904	0.338071	GLI3	ENST00000375832.5|LY6G6F|ENSG00000204424.10|lymphocyte antigen 6 family member G6F	ENST00000503322.1|LY6G6F-LY6G6D|ENSG00000250641.1|LY6G6F-LY6G6D readthrough
hg38_v1_chr11_-_69013233_69013268	0.337264	GLI3	ENST00000309099.7|MRGPRF|ENSG00000172935.9|MAS related GPR family member F	ENST00000320913.6|MRGPRF|ENSG00000172935.9|MAS related GPR family member F
hg38_v1_chr8_-_544825_544885	0.337169	GLI3	ENST00000324079.11|TDRP|ENSG00000180190.13|testis development related protein
hg38_v1_chr6_-_166956537_166956558	0.337011	GLI3	ENST00000508775.6|RNASET2|ENSG00000026297.17|ribonuclease T2
hg38_v1_chr14_+_22875136_22875179	0.336388	GLI3	ENST00000551466.1|LRP10|ENSG00000197324.9|LDL receptor related protein 10
hg38_v1_chr17_+_67377272_67377348	0.335735	GLI3	ENST00000581322.6|PITPNC1|ENSG00000154217.15|phosphatidylinositol transfer protein cytoplasmic 1	ENST00000299954.13|PITPNC1|ENSG00000154217.15|phosphatidylinositol transfer protein cytoplasmic 1
hg38_v1_chr1_+_207496268_207496341	0.335697	GLI3	ENST00000529814.1|CR1|ENSG00000203710.12|complement C3b/C4b receptor 1 (Knops blood group)
hg38_v1_chr9_-_133149334_133149440	0.334733	GLI3	ENST00000393160.7|RALGDS|ENSG00000160271.16|ral guanine nucleotide dissociation stimulator
hg38_v1_chr12_-_10169155_10169182	0.333781	GLI3	ENST00000539518.5|OLR1|ENSG00000173391.9|oxidized low density lipoprotein receptor 1
hg38_v1_chr11_-_3797746_3797792	0.33312	GLI3	ENST00000359171.8|NUP98|ENSG00000110713.17|nucleoporin 98 and 96 precursor
hg38_v1_chr8_+_97644164_97644200	0.331065	GLI3	ENST00000336273.8|MTDH|ENSG00000147649.10|metadherin
hg38_v1_chr9_+_4839761_4839780	0.328636	GLI3	ENST00000448872.6|RCL1|ENSG00000120158.12|RNA terminal phosphate cyclase like 1	ENST00000441844.2|RCL1|ENSG00000120158.12|RNA terminal phosphate cyclase like 1
hg38_v1_chr7_-_5423543_5423564	0.326989	GLI3	ENST00000399537.8|TNRC18|ENSG00000182095.15|trinucleotide repeat containing 18
hg38_v1_chr16_+_31873772_31873845	0.326987	GLI3	ENST00000394846.7|ZNF267|ENSG00000185947.15|zinc finger protein 267	ENST00000300870.15|ZNF267|ENSG00000185947.15|zinc finger protein 267
hg38_v1_chr17_-_63842457_63842470	0.32698	GLI3	ENST00000225742.13|SMARCD2|ENSG00000108604.16|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2
hg38_v1_chr7_-_22500152_22500205	0.326681	GLI3	ENST00000406890.6|STEAP1B|ENSG00000105889.16|STEAP family member 1B	ENST00000678116.1|STEAP1B|ENSG00000105889.16|STEAP family member 1B	ENST00000424363.5|STEAP1B|ENSG00000105889.16|STEAP family member 1B
hg38_v1_chr5_-_44389407_44389434	0.326155	GLI3	ENST00000264664.5|FGF10|ENSG00000070193.5|fibroblast growth factor 10
hg38_v1_chr7_+_150991087_150991107	0.326016	GLI3	ENST00000461406.5|NOS3|ENSG00000164867.11|nitric oxide synthase 3
hg38_v1_chr9_+_128456006_128456087	0.324297	GLI3	ENST00000351030.7|ODF2|ENSG00000136811.16|outer dense fiber of sperm tails 2	ENST00000372814.7|ODF2|ENSG00000136811.16|outer dense fiber of sperm tails 2
hg38_v1_chr7_-_92836555_92836608	0.324231	GLI3	ENST00000424848.3|CDK6|ENSG00000105810.10|cyclin dependent kinase 6
hg38_v1_chr16_+_30664334_30664457	0.324161	GLI3	ENST00000287468.5|FBRS|ENSG00000156860.16|fibrosin
hg38_v1_chr7_+_150991005_150991018	0.324086	GLI3	ENST00000297494.8|NOS3|ENSG00000164867.11|nitric oxide synthase 3
hg38_v1_chr19_+_18097763_18097804	0.324052	GLI3	ENST00000262811.10|MAST3|ENSG00000099308.10|microtubule associated serine/threonine kinase 3
hg38_v1_chr19_+_40775511_40775547	0.323547	GLI3	ENST00000263369.4|MIA|ENSG00000261857.7|MIA SH3 domain containing	ENST00000597140.5|MIA|ENSG00000261857.7|MIA SH3 domain containing
hg38_v1_chr3_-_195811889_195811903	0.323374	GLI3	ENST00000475231.5|MUC4|ENSG00000145113.22|mucin 4, cell surface associated
hg38_v1_chr1_+_201982613_201982667	0.323189	GLI3	ENST00000295640.9|RNPEP|ENSG00000176393.11|arginyl aminopeptidase	ENST00000367286.7|RNPEP|ENSG00000176393.11|arginyl aminopeptidase
hg38_v1_chr2_-_200864561_200864636	0.3218	GLI3	ENST00000434813.3|CLK1|ENSG00000013441.16|CDC like kinase 1
hg38_v1_chr1_-_243255170_243255290	0.321351	GLI3	ENST00000366542.6|CEP170|ENSG00000143702.16|centrosomal protein 170
hg38_v1_chrX_-_38327496_38327549	0.321094	GLI3	ENST00000642395.2|RPGR|ENSG00000156313.15|retinitis pigmentosa GTPase regulator	ENST00000645032.1|RPGR|ENSG00000156313.15|retinitis pigmentosa GTPase regulator	ENST00000644238.1|RPGR|ENSG00000156313.15|retinitis pigmentosa GTPase regulator	ENST00000642558.1|RPGR|ENSG00000156313.15|retinitis pigmentosa GTPase regulator	ENST00000339363.7|RPGR|ENSG00000156313.15|retinitis pigmentosa GTPase regulator	ENST00000644337.1|RPGR|ENSG00000156313.15|retinitis pigmentosa GTPase regulator	ENST00000647261.1|RPGR|ENSG00000156313.15|retinitis pigmentosa GTPase regulator
hg38_v1_chr2_+_201129483_201129503	0.320722	GLI3	ENST00000440180.5|CFLAR|ENSG00000003402.20|CASP8 and FADD like apoptosis regulator
hg38_v1_chr6_-_33314055_33314086	0.319324	GLI3	ENST00000434618.7|TAPBP|ENSG00000231925.12|TAP binding protein
hg38_v1_chr3_+_37994119_37994196	0.31902	GLI3	ENST00000465644.5|VILL|ENSG00000136059.15|villin like
hg38_v1_chr3_+_14432670_14432684	0.317679	GLI3	ENST00000452775.1|SLC6A6|ENSG00000131389.18|solute carrier family 6 member 6
hg38_v1_chr7_-_29195447_29195552	0.317535	GLI3	ENST00000437527.1|CPVL|ENSG00000106066.15|carboxypeptidase vitellogenic like	ENST00000455544.5|CPVL|ENSG00000106066.15|carboxypeptidase vitellogenic like
hg38_v1_chr1_-_28232996_28233042	0.317277	GLI3	ENST00000263697.6|DNAJC8|ENSG00000126698.11|DnaJ heat shock protein family (Hsp40) member C8
hg38_v1_chr12_+_6868154_6868197	0.316475	GLI3	ENST00000462761.5|TPI1|ENSG00000111669.15|triosephosphate isomerase 1
hg38_v1_chr7_+_69598465_69598486	0.316077	GLI3	ENST00000342771.10|AUTS2|ENSG00000158321.18|activator of transcription and developmental regulator AUTS2
hg38_v1_chr19_+_18831951_18832001	0.315782	GLI3	ENST00000262803.10|UPF1|ENSG00000005007.13|UPF1 RNA helicase and ATPase	ENST00000599848.5|UPF1|ENSG00000005007.13|UPF1 RNA helicase and ATPase
hg38_v1_chr6_-_33580229_33580310	0.315542	GLI3	ENST00000374467.4|BAK1|ENSG00000030110.13|BCL2 antagonist/killer 1	ENST00000442998.6|BAK1|ENSG00000030110.13|BCL2 antagonist/killer 1	ENST00000360661.9|BAK1|ENSG00000030110.13|BCL2 antagonist/killer 1
hg38_v1_chr17_+_67377413_67377461	0.314769	GLI3	ENST00000580974.5|PITPNC1|ENSG00000154217.15|phosphatidylinositol transfer protein cytoplasmic 1
hg38_v1_chr15_+_75023576_75023614	0.314665	GLI3	ENST00000564923.5|PPCDC|ENSG00000138621.12|phosphopantothenoylcysteine decarboxylase	ENST00000569562.5|PPCDC|ENSG00000138621.12|phosphopantothenoylcysteine decarboxylase	ENST00000342932.8|PPCDC|ENSG00000138621.12|phosphopantothenoylcysteine decarboxylase	ENST00000568649.5|PPCDC|ENSG00000138621.12|phosphopantothenoylcysteine decarboxylase
hg38_v1_chr17_-_49209217_49209262	0.313321	GLI3	ENST00000515635.5|GNGT2|ENSG00000167083.7|G protein subunit gamma transducin 2
hg38_v1_chr17_+_77453993_77454012	0.31303	GLI3	ENST00000592951.5|SEPTIN9|ENSG00000184640.20|septin 9
hg38_v1_chr12_-_108598036_108598148	0.312702	GLI3	ENST00000392806.4|TMEM119|ENSG00000183160.9|transmembrane protein 119	ENST00000547567.1|TMEM119|ENSG00000183160.9|transmembrane protein 119
hg38_v1_chr14_+_21768482_21768495	0.312208	GLI3	ENST00000390428.3|TRAV6|ENSG00000211780.3|T cell receptor alpha variable 6
hg38_v1_chr6_+_43130583_43130607	0.311769	GLI3	ENST00000481946.5|PTK7|ENSG00000112655.16|protein tyrosine kinase 7 (inactive)
hg38_v1_chr19_-_3546306_3546358	0.311747	GLI3	ENST00000398558.8|MFSD12|ENSG00000161091.14|major facilitator superfamily domain containing 12
hg38_v1_chr11_-_17077647_17077683	0.311561	GLI3	ENST00000533969.1|RPS13|ENSG00000110700.7|ribosomal protein S13	ENST00000228140.6|RPS13|ENSG00000110700.7|ribosomal protein S13	ENST00000525634.6|RPS13|ENSG00000110700.7|ribosomal protein S13
hg38_v1_chr1_+_22052627_22052722	0.310649	GLI3	ENST00000400259.5|CDC42|ENSG00000070831.17|cell division cycle 42	ENST00000344548.7|CDC42|ENSG00000070831.17|cell division cycle 42	ENST00000315554.13|CDC42|ENSG00000070831.17|cell division cycle 42	ENST00000656825.1|CDC42|ENSG00000070831.17|cell division cycle 42	ENST00000651171.1|CDC42|ENSG00000070831.17|cell division cycle 42	ENST00000652582.1|CDC42|ENSG00000070831.17|cell division cycle 42	ENST00000667384.1|CDC42|ENSG00000070831.17|cell division cycle 42
hg38_v1_chrX_-_3713593_3713660	0.309751	GLI3	ENST00000262848.6|PRKX|ENSG00000183943.6|protein kinase X-linked
hg38_v1_chr16_+_56657999_56658017	0.308943	GLI3	ENST00000568475.1|MT1F|ENSG00000198417.7|metallothionein 1F
hg38_v1_chr18_+_3451585_3451608	0.308785	GLI3	ENST00000551541.5|TGIF1|ENSG00000177426.22|TGFB induced factor homeobox 1
hg38_v1_chr19_+_3708378_3708503	0.307862	GLI3	ENST00000541714.7|TJP3|ENSG00000105289.15|tight junction protein 3	ENST00000539908.6|TJP3|ENSG00000105289.15|tight junction protein 3
hg38_v1_chr8_+_8701891_8701955	0.306461	GLI3	ENST00000519106.2|CLDN23|ENSG00000253958.2|claudin 23
hg38_v1_chr17_+_7583828_7583893	0.306261	GLI3	ENST00000396501.8|MPDU1|ENSG00000129255.16|mannose-P-dolichol utilization defect 1	ENST00000250124.11|MPDU1|ENSG00000129255.16|mannose-P-dolichol utilization defect 1	ENST00000584378.5|MPDU1|ENSG00000129255.16|mannose-P-dolichol utilization defect 1	ENST00000423172.6|MPDU1|ENSG00000129255.16|mannose-P-dolichol utilization defect 1	ENST00000579445.5|MPDU1|ENSG00000129255.16|mannose-P-dolichol utilization defect 1	ENST00000585217.5|MPDU1|ENSG00000129255.16|mannose-P-dolichol utilization defect 1	ENST00000581380.1|MPDU1|ENSG00000129255.16|mannose-P-dolichol utilization defect 1
hg38_v1_chr11_-_65047861_65047937	0.305806	GLI3	ENST00000533842.5|NAALADL1|ENSG00000168060.16|N-acetylated alpha-linked acidic dipeptidase like 1	ENST00000532802.5|NAALADL1|ENSG00000168060.16|N-acetylated alpha-linked acidic dipeptidase like 1	ENST00000530139.2|NAALADL1|ENSG00000168060.16|N-acetylated alpha-linked acidic dipeptidase like 1	ENST00000526516.5|NAALADL1|ENSG00000168060.16|N-acetylated alpha-linked acidic dipeptidase like 1
hg38_v1_chr18_+_3448456_3448499	0.304789	GLI3	ENST00000549780.5|TGIF1|ENSG00000177426.22|TGFB induced factor homeobox 1
hg38_v1_chr22_+_31496275_31496293	0.303851	GLI3	ENST00000432498.5|SFI1|ENSG00000198089.16|SFI1 centrin binding protein
hg38_v1_chr17_+_8310220_8310248	0.303416	GLI3	ENST00000583529.1|ARHGEF15|ENSG00000198844.12|Rho guanine nucleotide exchange factor 15	ENST00000361926.8|ARHGEF15|ENSG00000198844.12|Rho guanine nucleotide exchange factor 15
hg38_v1_chr22_+_22899481_22899624	0.302709	GLI3	ENST00000390322.2|IGLJ2|ENSG00000211676.2|immunoglobulin lambda joining 2
hg38_v1_chr1_+_155308748_155308923	0.302292	GLI3	ENST00000611010.4|FDPS|ENSG00000160752.15|farnesyl diphosphate synthase	ENST00000447866.5|FDPS|ENSG00000160752.15|farnesyl diphosphate synthase	ENST00000368356.9|FDPS|ENSG00000160752.15|farnesyl diphosphate synthase	ENST00000467076.5|FDPS|ENSG00000160752.15|farnesyl diphosphate synthase	ENST00000491013.5|FDPS|ENSG00000160752.15|farnesyl diphosphate synthase	ENST00000356657.10|FDPS|ENSG00000160752.15|farnesyl diphosphate synthase
hg38_v1_chr12_-_112409550_112409653	0.301834	GLI3	ENST00000550566.6|RPL6|ENSG00000089009.16|ribosomal protein L6	ENST00000553213.2|RPL6|ENSG00000089009.16|ribosomal protein L6	ENST00000424576.6|RPL6|ENSG00000089009.16|ribosomal protein L6	ENST00000202773.14|RPL6|ENSG00000089009.16|ribosomal protein L6
hg38_v1_chr6_-_33314202_33314215	0.301023	GLI3	ENST00000426633.6|TAPBP|ENSG00000231925.12|TAP binding protein	ENST00000467025.1|TAPBP|ENSG00000231925.12|TAP binding protein
hg38_v1_chr11_+_117200188_117200255	0.300598	GLI3	ENST00000529792.5|TAGLN|ENSG00000149591.17|transgelin
hg38_v1_chr19_+_840991_841006	0.298987	GLI3	ENST00000234347.10|PRTN3|ENSG00000196415.10|proteinase 3
hg38_v1_chr20_-_18497218_18497246	0.298966	GLI3	ENST00000337227.9|RBBP9|ENSG00000089050.16|RB binding protein 9, serine hydrolase
hg38_v1_chr20_-_1184473_1184473	0.298319	GLI3	ENST00000381894.3|TMEM74B|ENSG00000125895.6|transmembrane protein 74B
hg38_v1_chr2_+_24793098_24793171	0.296715	GLI3	ENST00000473706.5|CENPO|ENSG00000138092.11|centromere protein O
hg38_v1_chr19_+_676385_676403	0.296544	GLI3	ENST00000166139.9|FSTL3|ENSG00000070404.10|follistatin like 3
hg38_v1_chr16_-_88977196_88977217	0.29628	GLI3	ENST00000268679.9|CBFA2T3|ENSG00000129993.15|CBFA2/RUNX1 partner transcriptional co-repressor 3
hg38_v1_chr19_+_40775154_40775264	0.295787	GLI3	ENST00000594436.5|MIA|ENSG00000261857.7|MIA SH3 domain containing	ENST00000597784.5|MIA|ENSG00000261857.7|MIA SH3 domain containing
hg38_v1_chr5_-_95961830_95961859	0.294955	GLI3	ENST00000513343.1|ELL2|ENSG00000118985.16|elongation factor for RNA polymerase II 2	ENST00000237853.9|ELL2|ENSG00000118985.16|elongation factor for RNA polymerase II 2
hg38_v1_chr9_-_34381531_34381576	0.29414	GLI3	ENST00000379124.5|C9orf24|ENSG00000164972.13|chromosome 9 open reading frame 24	ENST00000379126.7|C9orf24|ENSG00000164972.13|chromosome 9 open reading frame 24	ENST00000379127.1|C9orf24|ENSG00000164972.13|chromosome 9 open reading frame 24
hg38_v1_chrX_-_107777038_107777091	0.293686	GLI3	ENST00000480691.2|TSC22D3|ENSG00000157514.17|TSC22 domain family member 3	ENST00000506081.5|TSC22D3|ENSG00000157514.17|TSC22 domain family member 3	ENST00000514426.1|TSC22D3|ENSG00000157514.17|TSC22 domain family member 3
hg38_v1_chr4_-_175812746_175812755	0.293574	GLI3	ENST00000393658.6|GPM6A|ENSG00000150625.16|glycoprotein M6A
hg38_v1_chr11_-_119056850_119056954	0.293198	GLI3	ENST00000530473.5|HYOU1|ENSG00000149428.19|hypoxia up-regulated 1
hg38_v1_chr10_+_47322450_47322459	0.293116	GLI3	ENST00000581492.3|GDF2|ENSG00000263761.3|growth differentiation factor 2
hg38_v1_chr22_+_31496139_31496168	0.291985	GLI3	ENST00000540643.5|SFI1|ENSG00000198089.16|SFI1 centrin binding protein
hg38_v1_chr17_-_4786433_4786450	0.291893	GLI3	ENST00000354194.4|VMO1|ENSG00000182853.12|vitelline membrane outer layer 1 homolog
hg38_v1_chr6_+_116280098_116280125	0.291851	GLI3	ENST00000643175.1|DSE|ENSG00000111817.19|dermatan sulfate epimerase	ENST00000452085.7|DSE|ENSG00000111817.19|dermatan sulfate epimerase
hg38_v1_chr1_+_247507058_247507126	0.291154	GLI3	ENST00000527084.5|GCSAML|ENSG00000169224.13|germinal center associated signaling and motility like	ENST00000536561.5|GCSAML|ENSG00000169224.13|germinal center associated signaling and motility like	ENST00000527541.5|GCSAML|ENSG00000169224.13|germinal center associated signaling and motility like	ENST00000366491.6|GCSAML|ENSG00000169224.13|germinal center associated signaling and motility like	ENST00000366489.5|GCSAML|ENSG00000169224.13|germinal center associated signaling and motility like	ENST00000526896.5|GCSAML|ENSG00000169224.13|germinal center associated signaling and motility like
hg38_v1_chr10_+_11017863_11017970	0.290634	GLI3	ENST00000633077.1|CELF2|ENSG00000048740.18|CUGBP Elav-like family member 2	ENST00000542579.5|CELF2|ENSG00000048740.18|CUGBP Elav-like family member 2	ENST00000632065.1|CELF2|ENSG00000048740.18|CUGBP Elav-like family member 2
hg38_v1_chr19_-_46784733_46784830	0.290017	GLI3	ENST00000593713.1|SLC1A5|ENSG00000105281.12|solute carrier family 1 member 5	ENST00000598022.1|SLC1A5|ENSG00000105281.12|solute carrier family 1 member 5	ENST00000434726.6|SLC1A5|ENSG00000105281.12|solute carrier family 1 member 5
hg38_v1_chr1_+_109910986_109911027	0.288786	GLI3	ENST00000369801.1|CSF1|ENSG00000184371.14|colony stimulating factor 1
hg38_v1_chr5_-_178232759_178232831	0.288668	GLI3	ENST00000308158.10|PHYKPL|ENSG00000175309.15|5-phosphohydroxy-L-lysine phospho-lyase
hg38_v1_chr19_-_49423441_49423441	0.28857	GLI3	ENST00000270631.2|PTH2|ENSG00000142538.2|parathyroid hormone 2
hg38_v1_chr9_+_110668854_110668873	0.288323	GLI3	ENST00000189978.10|MUSK|ENSG00000030304.14|muscle associated receptor tyrosine kinase	ENST00000374440.7|MUSK|ENSG00000030304.14|muscle associated receptor tyrosine kinase
hg38_v1_chr19_+_35115787_35115866	0.287697	GLI3	ENST00000604404.6|FXYD3|ENSG00000089356.19|FXYD domain containing ion transport regulator 3
hg38_v1_chr11_-_796185_796263	0.282269	GLI3	ENST00000533385.5|SLC25A22|ENSG00000177542.11|solute carrier family 25 member 22	ENST00000528936.5|SLC25A22|ENSG00000177542.11|solute carrier family 25 member 22	ENST00000629634.2|SLC25A22|ENSG00000177542.11|solute carrier family 25 member 22	ENST00000625752.2|SLC25A22|ENSG00000177542.11|solute carrier family 25 member 22	ENST00000528606.5|SLC25A22|ENSG00000177542.11|solute carrier family 25 member 22	ENST00000320230.9|SLC25A22|ENSG00000177542.11|solute carrier family 25 member 22
hg38_v1_chr17_-_78903193_78903219	0.282127	GLI3	ENST00000322630.3|CEP295NL|ENSG00000178404.10|CEP295 N-terminal like	ENST00000586713.5|CEP295NL|ENSG00000178404.10|CEP295 N-terminal like
hg38_v1_chr5_-_169300782_169300835	0.281344	GLI3	ENST00000332966.8|SLIT3|ENSG00000184347.15|slit guidance ligand 3
hg38_v1_chr10_-_101229449_101229465	0.28071	GLI3	ENST00000370193.4|LBX1|ENSG00000138136.7|ladybird homeobox 1
hg38_v1_chr20_-_31723491_31723552	0.280208	GLI3	ENST00000676582.1|BCL2L1|ENSG00000171552.14|BCL2 like 1	ENST00000422920.2|BCL2L1|ENSG00000171552.14|BCL2 like 1
hg38_v1_chr8_-_66613229_66613309	0.279942	GLI3	ENST00000517885.5|MYBL1|ENSG00000185697.17|MYB proto-oncogene like 1
hg38_v1_chr20_+_41136944_41137006	0.279641	GLI3	ENST00000244007.7|PLCG1|ENSG00000124181.14|phospholipase C gamma 1
hg38_v1_chr11_+_46381033_46381135	0.278026	GLI3	ENST00000359803.7|MDK|ENSG00000110492.16|midkine
hg38_v1_chr16_+_3458096_3458130	0.27752	GLI3	ENST00000570819.5|NAA60|ENSG00000122390.19|N-alpha-acetyltransferase 60, NatF catalytic subunit
hg38_v1_chr16_-_2329687_2329724	0.277447	GLI3	ENST00000567910.1|ABCA3|ENSG00000167972.14|ATP binding cassette subfamily A member 3
hg38_v1_chr5_-_181241605_181241641	0.277413	GLI3	ENST00000504128.5|RACK1|ENSG00000204628.12|receptor for activated C kinase 1
hg38_v1_chr12_-_124863902_124863926	0.275468	GLI3	ENST00000339570.9|SCARB1|ENSG00000073060.17|scavenger receptor class B member 1	ENST00000680556.1|SCARB1|ENSG00000073060.17|scavenger receptor class B member 1
hg38_v1_chr6_+_116370938_116371050	0.275379	GLI3	ENST00000644252.3|DSE|ENSG00000111817.19|dermatan sulfate epimerase	ENST00000646710.1|DSE|ENSG00000111817.19|dermatan sulfate epimerase	ENST00000359564.3|DSE|ENSG00000111817.19|dermatan sulfate epimerase
hg38_v1_chr7_+_101218146_101218191	0.275053	GLI3	ENST00000305105.3|ZNHIT1|ENSG00000106400.12|zinc finger HIT-type containing 1
hg38_v1_chrX_+_23664251_23664262	0.274639	GLI3	ENST00000379349.5|PRDX4|ENSG00000123131.13|peroxiredoxin 4
hg38_v1_chr16_+_86578543_86578555	0.273716	GLI3	ENST00000320241.5|FOXL1|ENSG00000176678.6|forkhead box L1
hg38_v1_chr17_-_42388360_42388463	0.273658	GLI3	ENST00000678960.1|STAT3|ENSG00000168610.16|signal transducer and activator of transcription 3	ENST00000404395.3|STAT3|ENSG00000168610.16|signal transducer and activator of transcription 3	ENST00000389272.7|STAT3|ENSG00000168610.16|signal transducer and activator of transcription 3	ENST00000677421.1|STAT3|ENSG00000168610.16|signal transducer and activator of transcription 3	ENST00000585517.5|STAT3|ENSG00000168610.16|signal transducer and activator of transcription 3	ENST00000264657.10|STAT3|ENSG00000168610.16|signal transducer and activator of transcription 3	ENST00000678048.1|STAT3|ENSG00000168610.16|signal transducer and activator of transcription 3	ENST00000678674.1|STAT3|ENSG00000168610.16|signal transducer and activator of transcription 3	ENST00000678913.1|STAT3|ENSG00000168610.16|signal transducer and activator of transcription 3	ENST00000678572.1|STAT3|ENSG00000168610.16|signal transducer and activator of transcription 3	ENST00000678906.1|STAT3|ENSG00000168610.16|signal transducer and activator of transcription 3
hg38_v1_chr12_-_4445810_4445816	0.273113	GLI3	ENST00000228837.3|FGF6|ENSG00000111241.3|fibroblast growth factor 6
hg38_v1_chr1_-_150974823_150974854	0.273029	GLI3	ENST00000361419.9|CERS2|ENSG00000143418.20|ceramide synthase 2	ENST00000368954.10|CERS2|ENSG00000143418.20|ceramide synthase 2
hg38_v1_chr3_+_186931344_186931360	0.272306	GLI3	ENST00000417392.5|ST6GAL1|ENSG00000073849.16|ST6 beta-galactoside alpha-2,6-sialyltransferase 1
hg38_v1_chr1_+_154974653_154974671	0.272226	GLI3	ENST00000368439.5|CKS1B|ENSG00000173207.13|CDC28 protein kinase regulatory subunit 1B
hg38_v1_chr17_+_77454063_77454088	0.271516	GLI3	ENST00000585929.5|SEPTIN9|ENSG00000184640.20|septin 9	ENST00000590917.5|SEPTIN9|ENSG00000184640.20|septin 9
hg38_v1_chr7_+_107169720_107169938	0.271472	GLI3	ENST00000468401.1|HBP1|ENSG00000105856.14|HMG-box transcription factor 1	ENST00000497535.5|HBP1|ENSG00000105856.14|HMG-box transcription factor 1	ENST00000485846.5|HBP1|ENSG00000105856.14|HMG-box transcription factor 1
hg38_v1_chr14_-_91510144_91510317	0.270839	GLI3	ENST00000554684.5|PPP4R3A|ENSG00000100796.18|protein phosphatase 4 regulatory subunit 3A	ENST00000554511.1|PPP4R3A|ENSG00000100796.18|protein phosphatase 4 regulatory subunit 3A	ENST00000554943.6|PPP4R3A|ENSG00000100796.18|protein phosphatase 4 regulatory subunit 3A
hg38_v1_chr1_-_26370745_26370767	0.270793	GLI3	ENST00000451801.5|ZNF683|ENSG00000176083.18|zinc finger protein 683	ENST00000454975.1|ZNF683|ENSG00000176083.18|zinc finger protein 683
hg38_v1_chr1_+_2586750_2586877	0.268926	GLI3	ENST00000444521.6|PRXL2B|ENSG00000157870.17|peroxiredoxin like 2B	ENST00000378425.9|PRXL2B|ENSG00000157870.17|peroxiredoxin like 2B	ENST00000419916.8|PRXL2B|ENSG00000157870.17|peroxiredoxin like 2B	ENST00000378424.9|PRXL2B|ENSG00000157870.17|peroxiredoxin like 2B	ENST00000537325.6|PRXL2B|ENSG00000157870.17|peroxiredoxin like 2B	ENST00000378427.6|PRXL2B|ENSG00000157870.17|peroxiredoxin like 2B	ENST00000465233.6|PRXL2B|ENSG00000157870.17|peroxiredoxin like 2B	ENST00000498083.2|PRXL2B|ENSG00000157870.17|peroxiredoxin like 2B
hg38_v1_chr2_-_207167220_207167267	0.268545	GLI3	ENST00000421199.5|KLF7|ENSG00000118263.15|Kruppel like factor 7	ENST00000457962.5|KLF7|ENSG00000118263.15|Kruppel like factor 7
hg38_v1_chr5_-_80256038_80256088	0.267997	GLI3	ENST00000507668.7|SERINC5|ENSG00000164300.17|serine incorporator 5
hg38_v1_chr10_+_133160194_133160261	0.267716	GLI3	ENST00000478074.6|KNDC1|ENSG00000171798.19|kinase non-catalytic C-lobe domain containing 1	ENST00000684248.1|KNDC1|ENSG00000171798.19|kinase non-catalytic C-lobe domain containing 1	ENST00000304613.8|KNDC1|ENSG00000171798.19|kinase non-catalytic C-lobe domain containing 1
hg38_v1_chr19_+_7534004_7534204	0.267635	GLI3	ENST00000221249.10|PNPLA6|ENSG00000032444.17|patatin like phospholipase domain containing 6	ENST00000601668.5|PNPLA6|ENSG00000032444.17|patatin like phospholipase domain containing 6	ENST00000601001.5|PNPLA6|ENSG00000032444.17|patatin like phospholipase domain containing 6
hg38_v1_chr19_-_38847423_38847440	0.267569	GLI3	ENST00000647557.1|HNRNPL|ENSG00000104824.18|heterogeneous nuclear ribonucleoprotein L
hg38_v1_chr19_-_11578136_11578269	0.267467	GLI3	ENST00000589792.5|ACP5|ENSG00000102575.13|acid phosphatase 5, tartrate resistant
hg38_v1_chr5_-_139462701_139462751	0.26736	GLI3	ENST00000618155.3|ECSCR|ENSG00000249751.4|endothelial cell surface expressed chemotaxis and apoptosis regulator
hg38_v1_chr12_+_31073849_31073900	0.267159	GLI3	ENST00000228264.10|DDX11|ENSG00000013573.17|DEAD/H-box helicase 11	ENST00000542838.6|DDX11|ENSG00000013573.17|DEAD/H-box helicase 11	ENST00000438391.6|DDX11|ENSG00000013573.17|DEAD/H-box helicase 11	ENST00000415475.6|DDX11|ENSG00000013573.17|DEAD/H-box helicase 11	ENST00000545668.5|DDX11|ENSG00000013573.17|DEAD/H-box helicase 11	ENST00000350437.8|DDX11|ENSG00000013573.17|DEAD/H-box helicase 11
hg38_v1_chr1_+_155308930_155308970	0.265385	GLI3	ENST00000465559.5|FDPS|ENSG00000160752.15|farnesyl diphosphate synthase	ENST00000612683.1|FDPS|ENSG00000160752.15|farnesyl diphosphate synthase
hg38_v1_chr16_+_2770911_2771036	0.265168	GLI3	ENST00000570539.1|SRRM2|ENSG00000167978.17|serine/arginine repetitive matrix 2
hg38_v1_chr17_+_18476737_18476805	0.26434	GLI3	ENST00000581545.5|LGALS9C|ENSG00000171916.17|galectin 9C	ENST00000582333.5|LGALS9C|ENSG00000171916.17|galectin 9C	ENST00000328114.11|LGALS9C|ENSG00000171916.17|galectin 9C	ENST00000583322.5|LGALS9C|ENSG00000171916.17|galectin 9C	ENST00000584941.5|LGALS9C|ENSG00000171916.17|galectin 9C
hg38_v1_chr15_+_73994694_73994776	0.264276	GLI3	ENST00000268058.8|PML|ENSG00000140464.20|PML nuclear body scaffold	ENST00000395132.6|PML|ENSG00000140464.20|PML nuclear body scaffold	ENST00000268059.10|PML|ENSG00000140464.20|PML nuclear body scaffold	ENST00000354026.10|PML|ENSG00000140464.20|PML nuclear body scaffold	ENST00000565898.5|PML|ENSG00000140464.20|PML nuclear body scaffold	ENST00000569477.5|PML|ENSG00000140464.20|PML nuclear body scaffold	ENST00000569965.5|PML|ENSG00000140464.20|PML nuclear body scaffold	ENST00000567543.5|PML|ENSG00000140464.20|PML nuclear body scaffold	ENST00000436891.7|PML|ENSG00000140464.20|PML nuclear body scaffold	ENST00000435786.6|PML|ENSG00000140464.20|PML nuclear body scaffold	ENST00000564428.5|PML|ENSG00000140464.20|PML nuclear body scaffold	ENST00000359928.8|PML|ENSG00000140464.20|PML nuclear body scaffold
hg38_v1_chr20_-_13638903_13638938	0.264203	GLI3	ENST00000455532.5|TASP1|ENSG00000089123.16|taspase 1	ENST00000337743.9|TASP1|ENSG00000089123.16|taspase 1
hg38_v1_chr3_-_195811916_195811939	0.264138	GLI3	ENST00000463781.8|MUC4|ENSG00000145113.22|mucin 4, cell surface associated
hg38_v1_chr17_+_28357638_28357673	0.263259	GLI3	ENST00000292114.8|TMEM199|ENSG00000244045.13|transmembrane protein 199	ENST00000591482.1|ENSG00000258924.4|ENSG00000258924.4|novel transcript readthrough between TMEM199 and SARM1
hg38_v1_chrX_-_49270477_49270521	0.263132	GLI3	ENST00000650877.1|FOXP3|ENSG00000049768.17|forkhead box P3	ENST00000651462.1|ENSG00000286181.1|ENSG00000286181.1|FOXP3 regulating long intergenic non-coding RNA
hg38_v1_chr19_+_1275997_1276037	0.262913	GLI3	ENST00000469144.5|FAM174C|ENSG00000228300.14|family with sequence similarity 174 member C
hg38_v1_chr16_-_67806513_67806652	0.262815	GLI3	ENST00000317506.8|RANBP10|ENSG00000141084.11|RAN binding protein 10	ENST00000448631.6|RANBP10|ENSG00000141084.11|RAN binding protein 10	ENST00000602677.5|RANBP10|ENSG00000141084.11|RAN binding protein 10	ENST00000630626.2|RANBP10|ENSG00000141084.11|RAN binding protein 10
hg38_v1_chr17_-_75270999_75271200	0.262199	GLI3	ENST00000579194.6|MIF4GD|ENSG00000125457.15|MIF4G domain containing	ENST00000580717.5|MIF4GD|ENSG00000125457.15|MIF4G domain containing	ENST00000577542.5|MIF4GD|ENSG00000125457.15|MIF4G domain containing	ENST00000579612.5|MIF4GD|ENSG00000125457.15|MIF4G domain containing	ENST00000245551.9|MIF4GD|ENSG00000125457.15|MIF4G domain containing	ENST00000578305.5|MIF4GD|ENSG00000125457.15|MIF4G domain containing
hg38_v1_chr16_+_68539213_68539327	0.260722	GLI3	ENST00000570495.5|ZFP90|ENSG00000184939.16|ZFP90 zinc finger protein	ENST00000564323.5|ZFP90|ENSG00000184939.16|ZFP90 zinc finger protein	ENST00000562156.5|ZFP90|ENSG00000184939.16|ZFP90 zinc finger protein	ENST00000573685.5|ZFP90|ENSG00000184939.16|ZFP90 zinc finger protein	ENST00000563169.7|ZFP90|ENSG00000184939.16|ZFP90 zinc finger protein	ENST00000611381.4|ZFP90|ENSG00000184939.16|ZFP90 zinc finger protein
hg38_v1_chr19_-_3606577_3606660	0.260333	GLI3	ENST00000411851.3|TBXA2R|ENSG00000006638.13|thromboxane A2 receptor
hg38_v1_chr16_+_3458006_3458060	0.259947	GLI3	ENST00000577013.6|NAA60|ENSG00000122390.19|N-alpha-acetyltransferase 60, NatF catalytic subunit	ENST00000414063.6|NAA60|ENSG00000122390.19|N-alpha-acetyltransferase 60, NatF catalytic subunit	ENST00000572584.2|NAA60|ENSG00000122390.19|N-alpha-acetyltransferase 60, NatF catalytic subunit
hg38_v1_chr7_-_100827504_100827531	0.259742	GLI3	ENST00000616502.4|EPHB4|ENSG00000196411.10|EPH receptor B4	ENST00000358173.8|EPHB4|ENSG00000196411.10|EPH receptor B4
hg38_v1_chr5_-_151141631_151141667	0.259737	GLI3	ENST00000523714.5|ANXA6|ENSG00000197043.14|annexin A6	ENST00000521749.5|ANXA6|ENSG00000197043.14|annexin A6
hg38_v1_chr10_+_17228215_17228248	0.259288	GLI3	ENST00000544301.7|VIM|ENSG00000026025.16|vimentin
hg38_v1_chr2_-_197198034_197198054	0.257789	GLI3	ENST00000328737.6|ANKRD44|ENSG00000065413.20|ankyrin repeat domain 44
hg38_v1_chr7_+_131285041_131285062	0.2567	GLI3	ENST00000429546.5|MKLN1|ENSG00000128585.18|muskelin 1
hg38_v1_chr21_-_45542414_45542456	0.255611	GLI3	ENST00000311124.9|SLC19A1|ENSG00000173638.19|solute carrier family 19 member 1
hg38_v1_chr12_+_98645218_98645300	0.25552	GLI3	ENST00000551964.6|APAF1|ENSG00000120868.14|apoptotic peptidase activating factor 1	ENST00000333991.5|APAF1|ENSG00000120868.14|apoptotic peptidase activating factor 1	ENST00000357310.5|APAF1|ENSG00000120868.14|apoptotic peptidase activating factor 1	ENST00000359972.6|APAF1|ENSG00000120868.14|apoptotic peptidase activating factor 1
hg38_v1_chr5_+_150846519_150846523	0.254909	GLI3	ENST00000522154.1|IRGM|ENSG00000237693.4|immunity related GTPase M
hg38_v1_chr18_-_48950960_48950967	0.254872	GLI3	ENST00000262158.8|SMAD7|ENSG00000101665.10|SMAD family member 7
hg38_v1_chr21_+_43659528_43659571	0.254754	GLI3	ENST00000340648.6|RRP1B|ENSG00000160208.13|ribosomal RNA processing 1B
hg38_v1_chr17_-_64506897_64506929	0.253933	GLI3	ENST00000581806.5|DDX5|ENSG00000108654.16|DEAD-box helicase 5
hg38_v1_chr22_-_50526130_50526185	0.253401	GLI3	ENST00000535425.5|SCO2|ENSG00000284194.3|synthesis of cytochrome C oxidase 2	ENST00000638598.2|SCO2|ENSG00000284194.3|synthesis of cytochrome C oxidase 2
hg38_v1_chr17_+_43006740_43006805	0.252079	GLI3	ENST00000438323.2|IFI35|ENSG00000068079.8|interferon induced protein 35	ENST00000415816.7|IFI35|ENSG00000068079.8|interferon induced protein 35
hg38_v1_chr19_-_51065067_51065114	0.251723	GLI3	ENST00000595547.5|KLK13|ENSG00000167759.13|kallikrein related peptidase 13	ENST00000335422.3|KLK13|ENSG00000167759.13|kallikrein related peptidase 13	ENST00000595793.6|KLK13|ENSG00000167759.13|kallikrein related peptidase 13	ENST00000596955.1|KLK13|ENSG00000167759.13|kallikrein related peptidase 13
hg38_v1_chr6_+_142301854_142301867	0.249936	GLI3	ENST00000230173.10|ADGRG6|ENSG00000112414.15|adhesion G protein-coupled receptor G6	ENST00000367608.6|ADGRG6|ENSG00000112414.15|adhesion G protein-coupled receptor G6
hg38_v1_chr11_+_61766073_61766117	0.248825	GLI3	ENST00000675319.1|MYRF|ENSG00000124920.14|myelin regulatory factor
hg38_v1_chr7_+_107168961_107169010	0.248694	GLI3	ENST00000468410.5|HBP1|ENSG00000105856.14|HMG-box transcription factor 1	ENST00000478930.5|HBP1|ENSG00000105856.14|HMG-box transcription factor 1	ENST00000464009.1|HBP1|ENSG00000105856.14|HMG-box transcription factor 1	ENST00000222574.9|HBP1|ENSG00000105856.14|HMG-box transcription factor 1
hg38_v1_chr2_-_241686712_241686737	0.248453	GLI3	ENST00000445261.5|DTYMK|ENSG00000168393.13|deoxythymidylate kinase
hg38_v1_chr11_-_504488_504552	0.24819	GLI3	ENST00000529368.5|RNH1|ENSG00000023191.17|ribonuclease/angiogenin inhibitor 1
hg38_v1_chr9_-_136304084_136304103	0.247453	GLI3	ENST00000638797.2|CCDC187|ENSG00000260220.7|coiled-coil domain containing 187	ENST00000624277.3|CCDC187|ENSG00000260220.7|coiled-coil domain containing 187
hg38_v1_chr19_-_2051224_2051253	0.247177	GLI3	ENST00000309340.11|MKNK2|ENSG00000099875.16|MAPK interacting serine/threonine kinase 2	ENST00000589534.2|MKNK2|ENSG00000099875.16|MAPK interacting serine/threonine kinase 2	ENST00000250896.9|MKNK2|ENSG00000099875.16|MAPK interacting serine/threonine kinase 2	ENST00000589509.5|MKNK2|ENSG00000099875.16|MAPK interacting serine/threonine kinase 2
hg38_v1_chr9_-_133376038_133376082	0.247076	GLI3	ENST00000371991.3|SURF4|ENSG00000148248.14|surfeit 4	ENST00000371989.8|SURF4|ENSG00000148248.14|surfeit 4
hg38_v1_chr17_-_42388467_42388540	0.246355	GLI3	ENST00000678792.1|STAT3|ENSG00000168610.16|signal transducer and activator of transcription 3	ENST00000679166.1|STAT3|ENSG00000168610.16|signal transducer and activator of transcription 3	ENST00000677442.1|STAT3|ENSG00000168610.16|signal transducer and activator of transcription 3	ENST00000677723.1|STAT3|ENSG00000168610.16|signal transducer and activator of transcription 3	ENST00000678905.1|STAT3|ENSG00000168610.16|signal transducer and activator of transcription 3	ENST00000677479.1|STAT3|ENSG00000168610.16|signal transducer and activator of transcription 3	ENST00000678043.1|STAT3|ENSG00000168610.16|signal transducer and activator of transcription 3	ENST00000677152.1|STAT3|ENSG00000168610.16|signal transducer and activator of transcription 3	ENST00000677603.1|STAT3|ENSG00000168610.16|signal transducer and activator of transcription 3	ENST00000588969.5|STAT3|ENSG00000168610.16|signal transducer and activator of transcription 3	ENST00000678535.1|STAT3|ENSG00000168610.16|signal transducer and activator of transcription 3	ENST00000679185.1|STAT3|ENSG00000168610.16|signal transducer and activator of transcription 3	ENST00000677030.1|STAT3|ENSG00000168610.16|signal transducer and activator of transcription 3	ENST00000679014.1|STAT3|ENSG00000168610.16|signal transducer and activator of transcription 3	ENST00000678044.1|STAT3|ENSG00000168610.16|signal transducer and activator of transcription 3	ENST00000678827.1|STAT3|ENSG00000168610.16|signal transducer and activator of transcription 3
hg38_v1_chr11_-_62573846_62573930	0.245943	GLI3	ENST00000329251.5|EEF1G|ENSG00000254772.10|eukaryotic translation elongation factor 1 gamma
hg38_v1_chr7_+_150405668_150405737	0.245841	GLI3	ENST00000642087.1|ENSG00000284691.1|ENSG00000284691.1|novel zinc finger protein
hg38_v1_chr17_-_1516621_1516645	0.245788	GLI3	ENST00000574561.1|INPP5K|ENSG00000132376.20|inositol polyphosphate-5-phosphatase K
hg38_v1_chr1_-_149927756_149927814	0.245505	GLI3	ENST00000271628.9|SF3B4|ENSG00000143368.10|splicing factor 3b subunit 4
hg38_v1_chr12_-_108731505_108731541	0.24499	GLI3	ENST00000261401.8|CORO1C|ENSG00000110880.11|coronin 1C	ENST00000552871.5|CORO1C|ENSG00000110880.11|coronin 1C
hg38_v1_chr8_-_22669084_22669148	0.243433	GLI3	ENST00000519513.5|BIN3|ENSG00000147439.13|bridging integrator 3	ENST00000276416.11|BIN3|ENSG00000147439.13|bridging integrator 3	ENST00000520292.1|BIN3|ENSG00000147439.13|bridging integrator 3	ENST00000522268.1|BIN3|ENSG00000147439.13|bridging integrator 3
hg38_v1_chr16_+_55488580_55488687	0.243077	GLI3	ENST00000570283.1|MMP2|ENSG00000087245.13|matrix metallopeptidase 2
hg38_v1_chr22_+_44668713_44668776	0.243044	GLI3	ENST00000432186.5|PRR5|ENSG00000186654.21|proline rich 5
hg38_v1_chr8_+_22579139_22579150	0.243026	GLI3	ENST00000397761.6|PDLIM2|ENSG00000120913.23|PDZ and LIM domain 2
hg38_v1_chr3_+_121567924_121567958	0.242578	GLI3	ENST00000334384.5|ARGFX|ENSG00000186103.5|arginine-fifty homeobox
hg38_v1_chr19_-_47886308_47886349	0.24224	GLI3	ENST00000222002.4|SULT2A1|ENSG00000105398.4|sulfotransferase family 2A member 1
hg38_v1_chr22_+_50481515_50481561	0.241967	GLI3	ENST00000395737.2|ADM2|ENSG00000128165.9|adrenomedullin 2	ENST00000395738.2|ADM2|ENSG00000128165.9|adrenomedullin 2
hg38_v1_chr19_+_7534242_7534264	0.24033	GLI3	ENST00000545201.6|PNPLA6|ENSG00000032444.17|patatin like phospholipase domain containing 6
hg38_v1_chr17_-_7404039_7404105	0.240309	GLI3	ENST00000576017.1|TMEM256|ENSG00000205544.4|transmembrane protein 256	ENST00000302422.4|TMEM256|ENSG00000205544.4|transmembrane protein 256
hg38_v1_chr2_-_240557957_240558021	0.240213	GLI3	ENST00000373318.6|ANKMY1|ENSG00000144504.15|ankyrin repeat and MYND domain containing 1	ENST00000406958.5|ANKMY1|ENSG00000144504.15|ankyrin repeat and MYND domain containing 1	ENST00000272972.7|ANKMY1|ENSG00000144504.15|ankyrin repeat and MYND domain containing 1	ENST00000401804.5|ANKMY1|ENSG00000144504.15|ankyrin repeat and MYND domain containing 1	ENST00000361678.8|ANKMY1|ENSG00000144504.15|ankyrin repeat and MYND domain containing 1	ENST00000391987.5|ANKMY1|ENSG00000144504.15|ankyrin repeat and MYND domain containing 1	ENST00000405523.7|ANKMY1|ENSG00000144504.15|ankyrin repeat and MYND domain containing 1
hg38_v1_chr19_+_10106398_10106419	0.239243	GLI3	ENST00000393793.5|PPAN|ENSG00000130810.20|peter pan homolog
hg38_v1_chrX_+_55000329_55000398	0.238665	GLI3	ENST00000374987.4|APEX2|ENSG00000169188.5|apurinic/apyrimidinic endodeoxyribonuclease 2
hg38_v1_chr15_+_73994777_73994803	0.237764	GLI3	ENST00000563500.5|PML|ENSG00000140464.20|PML nuclear body scaffold
hg38_v1_chr16_-_21440719_21440719	0.237276	GLI3	ENST00000521589.5|NPIPB3|ENSG00000169246.16|nuclear pore complex interacting protein family member B3
hg38_v1_chr5_+_52787899_52787990	0.237202	GLI3	ENST00000274311.3|PELO|ENSG00000152684.11|pelota mRNA surveillance and ribosome rescue factor	ENST00000282588.7|ITGA1|ENSG00000213949.10|integrin subunit alpha 1
hg38_v1_chrX_-_130385656_130385678	0.236777	GLI3	ENST00000276218.4|GPR119|ENSG00000147262.5|G protein-coupled receptor 119	ENST00000682440.1|GPR119|ENSG00000147262.5|G protein-coupled receptor 119
hg38_v1_chr20_-_3781440_3781454	0.236092	GLI3	ENST00000379756.3|SPEF1|ENSG00000101222.12|sperm flagellar 1
hg38_v1_chr7_-_23470469_23470499	0.23507	GLI3	ENST00000258729.8|IGF2BP3|ENSG00000136231.14|insulin like growth factor 2 mRNA binding protein 3
hg38_v1_chr19_-_51019699_51019716	0.234282	GLI3	ENST00000358789.8|KLK10|ENSG00000129451.12|kallikrein related peptidase 10
hg38_v1_chr17_+_7307579_7307601	0.233971	GLI3	ENST00000572815.5|EIF5A|ENSG00000132507.18|eukaryotic translation initiation factor 5A
hg38_v1_chr1_+_236523873_236523919	0.233576	GLI3	ENST00000238181.11|LGALS8|ENSG00000116977.19|galectin 8
hg38_v1_chr3_+_52455589_52455638	0.233575	GLI3	ENST00000345716.9|NISCH|ENSG00000010322.16|nischarin	ENST00000488380.5|NISCH|ENSG00000010322.16|nischarin	ENST00000420808.2|NISCH|ENSG00000010322.16|nischarin
hg38_v1_chr7_+_142511614_142511626	0.233335	GLI3	ENST00000390377.1|TRBV7-7|ENSG00000253291.1|T cell receptor beta variable 7-7
hg38_v1_chrX_+_71283577_71283761	0.232967	GLI3	ENST00000420903.6|NONO|ENSG00000147140.17|non-POU domain containing octamer binding	ENST00000373856.8|NONO|ENSG00000147140.17|non-POU domain containing octamer binding	ENST00000678437.1|NONO|ENSG00000147140.17|non-POU domain containing octamer binding	ENST00000678830.1|NONO|ENSG00000147140.17|non-POU domain containing octamer binding	ENST00000677879.1|NONO|ENSG00000147140.17|non-POU domain containing octamer binding	ENST00000373841.5|NONO|ENSG00000147140.17|non-POU domain containing octamer binding	ENST00000276079.13|NONO|ENSG00000147140.17|non-POU domain containing octamer binding	ENST00000676797.1|NONO|ENSG00000147140.17|non-POU domain containing octamer binding	ENST00000678660.1|NONO|ENSG00000147140.17|non-POU domain containing octamer binding	ENST00000678231.1|NONO|ENSG00000147140.17|non-POU domain containing octamer binding	ENST00000677612.1|NONO|ENSG00000147140.17|non-POU domain containing octamer binding	ENST00000413858.5|NONO|ENSG00000147140.17|non-POU domain containing octamer binding	ENST00000450092.6|NONO|ENSG00000147140.17|non-POU domain containing octamer binding
hg38_v1_chr1_+_2050387_2050450	0.232381	GLI3	ENST00000378567.8|PRKCZ|ENSG00000067606.17|protein kinase C zeta
hg38_v1_chr20_+_3209469_3209528	0.232373	GLI3	ENST00000380113.8|ITPA|ENSG00000125877.13|inosine triphosphatase	ENST00000455664.6|ITPA|ENSG00000125877.13|inosine triphosphatase	ENST00000399838.3|ITPA|ENSG00000125877.13|inosine triphosphatase
hg38_v1_chr19_+_50384323_50384373	0.231451	GLI3	ENST00000599857.7|POLD1|ENSG00000062822.15|DNA polymerase delta 1, catalytic subunit	ENST00000613923.6|POLD1|ENSG00000062822.15|DNA polymerase delta 1, catalytic subunit	ENST00000601098.6|POLD1|ENSG00000062822.15|DNA polymerase delta 1, catalytic subunit	ENST00000440232.7|POLD1|ENSG00000062822.15|DNA polymerase delta 1, catalytic subunit	ENST00000595904.6|POLD1|ENSG00000062822.15|DNA polymerase delta 1, catalytic subunit	ENST00000593887.1|POLD1|ENSG00000062822.15|DNA polymerase delta 1, catalytic subunit
hg38_v1_chr11_+_63506073_63506153	0.231243	GLI3	ENST00000255684.10|LGALS12|ENSG00000133317.16|galectin 12	ENST00000394618.9|LGALS12|ENSG00000133317.16|galectin 12
hg38_v1_chr10_-_5185104_5185181	0.231209	GLI3	ENST00000648824.1|AKR1C8P|ENSG00000264006.8|aldo-keto reductase family 1 member C8, pseudogene	ENST00000650030.1|AKR1C8P|ENSG00000264006.8|aldo-keto reductase family 1 member C8, pseudogene
hg38_v1_chr20_+_50731665_50731721	0.231203	GLI3	ENST00000396039.1|PARD6B|ENSG00000124171.9|par-6 family cell polarity regulator beta
hg38_v1_chr17_+_32928038_32928071	0.230604	GLI3	ENST00000395149.6|TMEM98|ENSG00000006042.12|transmembrane protein 98	ENST00000261713.8|TMEM98|ENSG00000006042.12|transmembrane protein 98
hg38_v1_chr11_+_844067_844158	0.229964	GLI3	ENST00000397406.5|TSPAN4|ENSG00000214063.11|tetraspanin 4	ENST00000409543.6|TSPAN4|ENSG00000214063.11|tetraspanin 4	ENST00000525201.5|TSPAN4|ENSG00000214063.11|tetraspanin 4
hg38_v1_chr16_-_2009797_2009835	0.229752	GLI3	ENST00000563630.6|ZNF598|ENSG00000167962.14|zinc finger protein 598, E3 ubiquitin ligase	ENST00000562103.2|ZNF598|ENSG00000167962.14|zinc finger protein 598, E3 ubiquitin ligase
hg38_v1_chr4_-_7939789_7939926	0.229673	GLI3	ENST00000420658.6|AFAP1|ENSG00000196526.11|actin filament associated protein 1	ENST00000358461.6|AFAP1|ENSG00000196526.11|actin filament associated protein 1
hg38_v1_chr2_+_60881553_60881619	0.229634	GLI3	ENST00000394479.4|REL|ENSG00000162924.15|REL proto-oncogene, NF-kB subunit
hg38_v1_chr6_+_30717433_30717441	0.229158	GLI3	ENST00000681435.1|TUBB|ENSG00000196230.14|tubulin beta class I
hg38_v1_chr11_-_119057105_119057157	0.22908	GLI3	ENST00000534233.5|HYOU1|ENSG00000149428.19|hypoxia up-regulated 1	ENST00000614711.4|HYOU1|ENSG00000149428.19|hypoxia up-regulated 1	ENST00000530467.5|HYOU1|ENSG00000149428.19|hypoxia up-regulated 1	ENST00000621959.4|HYOU1|ENSG00000149428.19|hypoxia up-regulated 1	ENST00000532519.6|HYOU1|ENSG00000149428.19|hypoxia up-regulated 1	ENST00000532421.5|HYOU1|ENSG00000149428.19|hypoxia up-regulated 1	ENST00000610597.1|HYOU1|ENSG00000149428.19|hypoxia up-regulated 1	ENST00000612687.4|HYOU1|ENSG00000149428.19|hypoxia up-regulated 1
hg38_v1_chr20_-_18467023_18467185	0.228656	GLI3	ENST00000262547.9|DZANK1|ENSG00000089091.16|double zinc ribbon and ankyrin repeat domains 1
hg38_v1_chr19_+_10106592_10106647	0.228558	GLI3	ENST00000446223.5|PPAN|ENSG00000130810.20|peter pan homolog
hg38_v1_chr3_-_50350710_50350814	0.227571	GLI3	ENST00000232501.8|NPRL2|ENSG00000114388.14|NPR2 like, GATOR1 complex subunit
hg38_v1_chr1_+_43933675_43933772	0.227232	GLI3	ENST00000477048.5|ARTN|ENSG00000117407.17|artemin	ENST00000471394.6|ARTN|ENSG00000117407.17|artemin
hg38_v1_chr10_+_102644887_102644983	0.227014	GLI3	ENST00000462202.3|TRIM8|ENSG00000171206.15|tripartite motif containing 8
hg38_v1_chr5_+_178204522_178204571	0.226473	GLI3	ENST00000506339.5|HNRNPAB|ENSG00000197451.12|heterogeneous nuclear ribonucleoprotein A/B	ENST00000358344.8|HNRNPAB|ENSG00000197451.12|heterogeneous nuclear ribonucleoprotein A/B	ENST00000355836.9|HNRNPAB|ENSG00000197451.12|heterogeneous nuclear ribonucleoprotein A/B	ENST00000514633.5|HNRNPAB|ENSG00000197451.12|heterogeneous nuclear ribonucleoprotein A/B	ENST00000515193.5|HNRNPAB|ENSG00000197451.12|heterogeneous nuclear ribonucleoprotein A/B	ENST00000506259.5|HNRNPAB|ENSG00000197451.12|heterogeneous nuclear ribonucleoprotein A/B	ENST00000504898.5|HNRNPAB|ENSG00000197451.12|heterogeneous nuclear ribonucleoprotein A/B
hg38_v1_chr19_-_42255119_42255137	0.226005	GLI3	ENST00000222329.9|ERF|ENSG00000105722.10|ETS2 repressor factor	ENST00000594664.1|ENSG00000268643.2|ENSG00000268643.2|novel protein
hg38_v1_chr11_-_119057218_119057229	0.225272	GLI3	ENST00000652093.1|HYOU1|ENSG00000149428.19|hypoxia up-regulated 1
hg38_v1_chrX_-_47659128_47659188	0.224968	GLI3	ENST00000333119.7|UXT|ENSG00000126756.12|ubiquitously expressed prefoldin like chaperone	ENST00000335890.3|UXT|ENSG00000126756.12|ubiquitously expressed prefoldin like chaperone
hg38_v1_chr12_-_57110284_57110340	0.224506	GLI3	ENST00000543873.6|STAT6|ENSG00000166888.12|signal transducer and activator of transcription 6	ENST00000554663.5|STAT6|ENSG00000166888.12|signal transducer and activator of transcription 6	ENST00000557635.5|STAT6|ENSG00000166888.12|signal transducer and activator of transcription 6
hg38_v1_chr20_-_31722854_31722885	0.222478	GLI3	ENST00000307677.5|BCL2L1|ENSG00000171552.14|BCL2 like 1
hg38_v1_chr7_+_2656092_2656143	0.221792	GLI3	ENST00000429448.1|TTYH3|ENSG00000136295.15|tweety family member 3
hg38_v1_chr19_+_10106320_10106395	0.221622	GLI3	ENST00000253107.12|PPAN|ENSG00000130810.20|peter pan homolog	ENST00000393796.4|PPAN-P2RY11|ENSG00000243207.6|PPAN-P2RY11 readthrough
hg38_v1_chr12_+_64452338_64452475	0.220739	GLI3	ENST00000540417.1|TBK1|ENSG00000183735.11|TANK binding kinase 1	ENST00000678368.1|TBK1|ENSG00000183735.11|TANK binding kinase 1	ENST00000539810.1|TBK1|ENSG00000183735.11|TANK binding kinase 1
hg38_v1_chr11_-_116792386_116792420	0.220716	GLI3	ENST00000433069.2|APOA5|ENSG00000110243.12|apolipoprotein A5	ENST00000542499.5|APOA5|ENSG00000110243.12|apolipoprotein A5
hg38_v1_chr16_+_9091593_9091659	0.220532	GLI3	ENST00000327827.12|C16orf72|ENSG00000182831.12|chromosome 16 open reading frame 72
hg38_v1_chr1_-_156752404_156752454	0.220354	GLI3	ENST00000368206.5|HDGF|ENSG00000143321.19|heparin binding growth factor
hg38_v1_chr5_+_80960694_80960739	0.220037	GLI3	ENST00000638442.1|RASGRF2|ENSG00000113319.13|Ras protein specific guanine nucleotide releasing factor 2
hg38_v1_chr8_-_56993253_56993360	0.219495	GLI3	ENST00000517461.1|BPNT2|ENSG00000104331.9|3'(2'), 5'-bisphosphate nucleotidase 2
hg38_v1_chr16_+_2471284_2471310	0.219377	GLI3	ENST00000293973.2|NTN3|ENSG00000162068.2|netrin 3
hg38_v1_chr11_-_6619353_6619448	0.219154	GLI3	ENST00000642892.1|TPP1|ENSG00000166340.18|tripeptidyl peptidase 1	ENST00000645620.1|TPP1|ENSG00000166340.18|tripeptidyl peptidase 1	ENST00000533371.6|TPP1|ENSG00000166340.18|tripeptidyl peptidase 1	ENST00000647152.1|TPP1|ENSG00000166340.18|tripeptidyl peptidase 1	ENST00000644810.1|TPP1|ENSG00000166340.18|tripeptidyl peptidase 1	ENST00000299427.12|TPP1|ENSG00000166340.18|tripeptidyl peptidase 1	ENST00000682424.1|TPP1|ENSG00000166340.18|tripeptidyl peptidase 1	ENST00000644218.1|TPP1|ENSG00000166340.18|tripeptidyl peptidase 1	ENST00000528657.2|TPP1|ENSG00000166340.18|tripeptidyl peptidase 1	ENST00000531754.2|TPP1|ENSG00000166340.18|tripeptidyl peptidase 1
hg38_v1_chr7_+_64903247_64903290	0.218976	GLI3	ENST00000476120.1|ZNF273|ENSG00000198039.11|zinc finger protein 273
hg38_v1_chr17_-_7080275_7080307	0.218889	GLI3	ENST00000571664.1|CLEC10A|ENSG00000132514.14|C-type lectin domain containing 10A	ENST00000254868.8|CLEC10A|ENSG00000132514.14|C-type lectin domain containing 10A
hg38_v1_chr11_+_65261950_65261988	0.218486	GLI3	ENST00000265465.8|POLA2|ENSG00000014138.9|DNA polymerase alpha 2, accessory subunit
hg38_v1_chr6_-_75284309_75284341	0.218261	GLI3	ENST00000518161.1|TMEM30A|ENSG00000112697.17|transmembrane protein 30A
hg38_v1_chr17_-_6651557_6651634	0.217585	GLI3	ENST00000225728.8|MED31|ENSG00000108590.11|mediator complex subunit 31	ENST00000575197.1|MED31|ENSG00000108590.11|mediator complex subunit 31
hg38_v1_chr19_-_1848452_1848489	0.217501	GLI3	ENST00000170168.9|REXO1|ENSG00000079313.15|RNA exonuclease 1 homolog
hg38_v1_chr16_+_88382950_88382965	0.216557	GLI3	ENST00000565624.3|ZNF469|ENSG00000225614.4|zinc finger protein 469
hg38_v1_chr15_-_72197772_72197804	0.216427	GLI3	ENST00000309731.12|GRAMD2A|ENSG00000175318.12|GRAM domain containing 2A
hg38_v1_chr1_+_170935526_170935537	0.215989	GLI3	ENST00000367758.7|MROH9|ENSG00000117501.15|maestro heat like repeat family member 9	ENST00000367759.9|MROH9|ENSG00000117501.15|maestro heat like repeat family member 9
hg38_v1_chr12_-_122266410_122266424	0.215127	GLI3	ENST00000451053.3|VPS33A|ENSG00000139719.11|VPS33A core subunit of CORVET and HOPS complexes
hg38_v1_chr17_+_75093287_75093356	0.214954	GLI3	ENST00000538213.6|SLC16A5|ENSG00000170190.16|solute carrier family 16 member 5	ENST00000584118.1|SLC16A5|ENSG00000170190.16|solute carrier family 16 member 5
hg38_v1_chr21_+_46120510_46120560	0.214452	GLI3	ENST00000413758.1|COL6A2|ENSG00000142173.16|collagen type VI alpha 2 chain
hg38_v1_chr17_-_7241787_7241853	0.21444	GLI3	ENST00000577035.5|GABARAP|ENSG00000170296.10|GABA type A receptor-associated protein
hg38_v1_chr12_+_6493350_6493394	0.214123	GLI3	ENST00000539714.5|NCAPD2|ENSG00000010292.13|non-SMC condensin I complex subunit D2
hg38_v1_chr19_-_53824288_53824394	0.213991	GLI3	ENST00000324134.11|NLRP12|ENSG00000142405.22|NLR family pyrin domain containing 12	ENST00000391773.6|NLRP12|ENSG00000142405.22|NLR family pyrin domain containing 12	ENST00000391775.7|NLRP12|ENSG00000142405.22|NLR family pyrin domain containing 12	ENST00000345770.9|NLRP12|ENSG00000142405.22|NLR family pyrin domain containing 12	ENST00000391772.1|NLRP12|ENSG00000142405.22|NLR family pyrin domain containing 12
hg38_v1_chr16_+_3458063_3458086	0.213282	GLI3	ENST00000574423.2|ENSG00000263212.2|ENSG00000263212.2|novel transcript	ENST00000576787.5|NAA60|ENSG00000122390.19|N-alpha-acetyltransferase 60, NatF catalytic subunit	ENST00000572942.5|NAA60|ENSG00000122390.19|N-alpha-acetyltransferase 60, NatF catalytic subunit	ENST00000576916.5|NAA60|ENSG00000122390.19|N-alpha-acetyltransferase 60, NatF catalytic subunit	ENST00000575076.5|NAA60|ENSG00000122390.19|N-alpha-acetyltransferase 60, NatF catalytic subunit	ENST00000572131.5|NAA60|ENSG00000122390.19|N-alpha-acetyltransferase 60, NatF catalytic subunit
hg38_v1_chr12_-_89525205_89525310	0.21323	GLI3	ENST00000549504.1|POC1B|ENSG00000139323.14|POC1 centriolar protein B
hg38_v1_chr4_-_40630739_40630786	0.212355	GLI3	ENST00000511902.5|RBM47|ENSG00000163694.15|RNA binding motif protein 47	ENST00000505220.1|RBM47|ENSG00000163694.15|RNA binding motif protein 47
hg38_v1_chr3_-_58211212_58211228	0.212181	GLI3	ENST00000461914.7|DNASE1L3|ENSG00000163687.14|deoxyribonuclease 1 like 3
hg38_v1_chr6_+_32969345_32969449	0.212115	GLI3	ENST00000678250.1|BRD2|ENSG00000204256.14|bromodomain containing 2
hg38_v1_chr11_-_69013356_69013382	0.21206	GLI3	ENST00000441623.1|MRGPRF|ENSG00000172935.9|MAS related GPR family member F
hg38_v1_chr16_-_1918407_1918425	0.211996	GLI3	ENST00000454677.3|HS3ST6|ENSG00000162040.7|heparan sulfate-glucosamine 3-sulfotransferase 6
hg38_v1_chr9_+_128098304_128098463	0.211612	GLI3	ENST00000373064.9|SLC25A25|ENSG00000148339.13|solute carrier family 25 member 25
hg38_v1_chr7_-_101217569_101217616	0.211295	GLI3	ENST00000223127.8|PLOD3|ENSG00000106397.12|procollagen-lysine,2-oxoglutarate 5-dioxygenase 3
hg38_v1_chr2_+_200585987_200586094	0.211263	GLI3	ENST00000374700.7|AOX1|ENSG00000138356.14|aldehyde oxidase 1
hg38_v1_chr5_+_172905217_172905368	0.211153	GLI3	ENST00000518247.5|ERGIC1|ENSG00000113719.16|endoplasmic reticulum-golgi intermediate compartment 1	ENST00000326654.6|ERGIC1|ENSG00000113719.16|endoplasmic reticulum-golgi intermediate compartment 1
hg38_v1_chr16_+_89686661_89686709	0.211151	GLI3	ENST00000505473.5|CDK10|ENSG00000185324.22|cyclin dependent kinase 10	ENST00000353379.12|CDK10|ENSG00000185324.22|cyclin dependent kinase 10	ENST00000625631.1|CDK10|ENSG00000185324.22|cyclin dependent kinase 10	ENST00000564192.5|CDK10|ENSG00000185324.22|cyclin dependent kinase 10
hg38_v1_chr19_-_11384299_11384327	0.211086	GLI3	ENST00000592375.6|EPOR|ENSG00000187266.14|erythropoietin receptor	ENST00000222139.11|EPOR|ENSG00000187266.14|erythropoietin receptor
hg38_v1_chr11_+_44066179_44066277	0.210922	GLI3	ENST00000524990.5|ACCS|ENSG00000110455.14|1-aminocyclopropane-1-carboxylate synthase homolog (inactive)	ENST00000263776.9|ACCS|ENSG00000110455.14|1-aminocyclopropane-1-carboxylate synthase homolog (inactive)
hg38_v1_chr11_-_120120880_120120901	0.209396	GLI3	ENST00000526881.1|TRIM29|ENSG00000137699.17|tripartite motif containing 29
hg38_v1_chr17_-_41009124_41009129	0.209288	GLI3	ENST00000391588.3|KRTAP3-1|ENSG00000212901.4|keratin associated protein 3-1
hg38_v1_chr17_-_82051332_82051573	0.209074	GLI3	ENST00000429557.7|RFNG|ENSG00000169733.12|RFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase	ENST00000578356.1|RFNG|ENSG00000169733.12|RFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
hg38_v1_chr19_+_53865584_53865633	0.208972	GLI3	ENST00000336967.8|MYADM|ENSG00000179820.16|myeloid associated differentiation marker
hg38_v1_chr14_-_91510450_91510527	0.208922	GLI3	ENST00000555462.5|PPP4R3A|ENSG00000100796.18|protein phosphatase 4 regulatory subunit 3A
hg38_v1_chr2_-_85612023_85612079	0.208672	GLI3	ENST00000409734.3|C2orf68|ENSG00000168887.11|chromosome 2 open reading frame 68	ENST00000306336.6|C2orf68|ENSG00000168887.11|chromosome 2 open reading frame 68
hg38_v1_chr6_-_33314247_33314269	0.208325	GLI3	ENST00000475304.5|TAPBP|ENSG00000231925.12|TAP binding protein	ENST00000489157.5|TAPBP|ENSG00000231925.12|TAP binding protein
hg38_v1_chr17_-_28661897_28661923	0.208203	GLI3	ENST00000247020.9|SDF2|ENSG00000132581.10|stromal cell derived factor 2
hg38_v1_chr16_+_19113955_19114059	0.20804	GLI3	ENST00000381440.5|ITPRIPL2|ENSG00000205730.7|ITPRIP like 2	ENST00000564808.6|ENSG00000261427.6|ENSG00000261427.6|novel transcript	ENST00000568526.1|ENSG00000261427.6|ENSG00000261427.6|novel transcript
hg38_v1_chr17_-_28897724_28897740	0.207587	GLI3	ENST00000394908.9|FLOT2|ENSG00000132589.16|flotillin 2
hg38_v1_chr14_+_104689588_104689642	0.207065	GLI3	ENST00000330634.11|INF2|ENSG00000203485.14|inverted formin 2	ENST00000392634.9|INF2|ENSG00000203485.14|inverted formin 2	ENST00000675482.1|INF2|ENSG00000203485.14|inverted formin 2	ENST00000398337.8|INF2|ENSG00000203485.14|inverted formin 2
hg38_v1_chr17_-_17591658_17591723	0.206509	GLI3	ENST00000435340.6|PEMT|ENSG00000133027.18|phosphatidylethanolamine N-methyltransferase	ENST00000255389.10|PEMT|ENSG00000133027.18|phosphatidylethanolamine N-methyltransferase	ENST00000395781.6|PEMT|ENSG00000133027.18|phosphatidylethanolamine N-methyltransferase
hg38_v1_chr16_+_50279515_50279554	0.206469	GLI3	ENST00000569265.1|ADCY7|ENSG00000121281.13|adenylate cyclase 7
hg38_v1_chr5_-_102296260_102296325	0.205915	GLI3	ENST00000310954.7|SLCO4C1|ENSG00000173930.9|solute carrier organic anion transporter family member 4C1
hg38_v1_chr8_-_144852991_144853082	0.204922	GLI3	ENST00000533270.1|COMMD5|ENSG00000170619.10|COMM domain containing 5	ENST00000305103.4|COMMD5|ENSG00000170619.10|COMM domain containing 5	ENST00000402718.4|COMMD5|ENSG00000170619.10|COMM domain containing 5	ENST00000543949.2|COMMD5|ENSG00000170619.10|COMM domain containing 5
hg38_v1_chr12_-_49130113_49130251	0.204804	GLI3	ENST00000549870.5|TUBA1B|ENSG00000123416.15|tubulin alpha 1b
hg38_v1_chr1_+_203007364_203007402	0.20442	GLI3	ENST00000367242.4|TMEM183A|ENSG00000163444.12|transmembrane protein 183A
hg38_v1_chr10_-_47762676_47762676	0.203957	GLI3	ENST00000622861.5|ENSG00000277758.6|ENSG00000277758.6|novel protein identical to synaptotagmin XV
hg38_v1_chr6_+_150686762_150686777	0.203401	GLI3	ENST00000644913.1|PLEKHG1|ENSG00000120278.16|pleckstrin homology and RhoGEF domain containing G1
hg38_v1_chrX_+_11758159_11758268	0.202078	GLI3	ENST00000361672.6|MSL3|ENSG00000005302.19|MSL complex subunit 3	ENST00000337339.7|MSL3|ENSG00000005302.19|MSL complex subunit 3	ENST00000647869.1|MSL3|ENSG00000005302.19|MSL complex subunit 3	ENST00000312196.10|MSL3|ENSG00000005302.19|MSL complex subunit 3	ENST00000647857.1|MSL3|ENSG00000005302.19|MSL complex subunit 3	ENST00000649130.1|MSL3|ENSG00000005302.19|MSL complex subunit 3
hg38_v1_chr8_+_89902529_89902628	0.200869	GLI3	ENST00000451899.7|OSGIN2|ENSG00000164823.11|oxidative stress induced growth inhibitor family member 2
hg38_v1_chr10_+_18659382_18659519	0.199746	GLI3	ENST00000377275.4|ARL5B|ENSG00000165997.5|ADP ribosylation factor like GTPase 5B
hg38_v1_chr13_+_113105782_113105807	0.199693	GLI3	ENST00000541084.5|F7|ENSG00000057593.14|coagulation factor VII	ENST00000346342.8|F7|ENSG00000057593.14|coagulation factor VII	ENST00000375581.3|F7|ENSG00000057593.14|coagulation factor VII
hg38_v1_chr16_-_4767125_4767216	0.199569	GLI3	ENST00000219478.11|ZNF500|ENSG00000103199.14|zinc finger protein 500	ENST00000545009.1|ZNF500|ENSG00000103199.14|zinc finger protein 500
hg38_v1_chr11_-_111512339_111512367	0.199544	GLI3	ENST00000525791.5|BTG4|ENSG00000137707.13|BTG anti-proliferation factor 4	ENST00000456861.2|BTG4|ENSG00000137707.13|BTG anti-proliferation factor 4	ENST00000356018.6|BTG4|ENSG00000137707.13|BTG anti-proliferation factor 4
hg38_v1_chr19_+_14433384_14433493	0.199401	GLI3	ENST00000586557.5|PKN1|ENSG00000123143.13|protein kinase N1	ENST00000590097.5|PKN1|ENSG00000123143.13|protein kinase N1
hg38_v1_chr10_+_71319249_71319290	0.19914	GLI3	ENST00000373189.6|SLC29A3|ENSG00000198246.9|solute carrier family 29 member 3	ENST00000479577.2|SLC29A3|ENSG00000198246.9|solute carrier family 29 member 3
hg38_v1_chr9_+_40223317_40223402	0.198892	GLI3	ENST00000611747.1|ANKRD20A2P|ENSG00000183148.7|ankyrin repeat domain 20 family member A2, pseudogene	ENST00000377601.3|ANKRD20A2P|ENSG00000183148.7|ankyrin repeat domain 20 family member A2, pseudogene	ENST00000654136.1|ENSG00000240240.9|ENSG00000240240.9|novel transcript	ENST00000659103.1|ENSG00000240240.9|ENSG00000240240.9|novel transcript
hg38_v1_chr2_+_127701490_127701532	0.198433	GLI3	ENST00000310981.6|SFT2D3|ENSG00000173349.6|SFT2 domain containing 3
hg38_v1_chr3_-_88059042_88059053	0.198298	GLI3	ENST00000309534.10|CGGBP1|ENSG00000163320.12|CGG triplet repeat binding protein 1
hg38_v1_chr12_-_89525444_89525615	0.198001	GLI3	ENST00000549035.1|POC1B|ENSG00000139323.14|POC1 centriolar protein B	ENST00000393179.8|POC1B|ENSG00000139323.14|POC1 centriolar protein B
hg38_v1_chr4_-_40630826_40630896	0.197948	GLI3	ENST00000505414.5|RBM47|ENSG00000163694.15|RNA binding motif protein 47	ENST00000511598.5|RBM47|ENSG00000163694.15|RNA binding motif protein 47
hg38_v1_chr5_+_69415065_69415157	0.197832	GLI3	ENST00000647531.1|MARVELD2|ENSG00000152939.17|MARVEL domain containing 2	ENST00000645446.1|MARVELD2|ENSG00000152939.17|MARVEL domain containing 2	ENST00000325631.10|MARVELD2|ENSG00000152939.17|MARVEL domain containing 2	ENST00000454295.6|MARVELD2|ENSG00000152939.17|MARVEL domain containing 2
hg38_v1_chr17_+_77454017_77454046	0.197349	GLI3	ENST00000586433.5|SEPTIN9|ENSG00000184640.20|septin 9
hg38_v1_chr17_-_44123628_44123702	0.196411	GLI3	ENST00000587135.1|HDAC5|ENSG00000108840.16|histone deacetylase 5	ENST00000225983.10|HDAC5|ENSG00000108840.16|histone deacetylase 5	ENST00000682912.1|HDAC5|ENSG00000108840.16|histone deacetylase 5	ENST00000588703.5|HDAC5|ENSG00000108840.16|histone deacetylase 5
hg38_v1_chr20_+_32819942_32819989	0.196009	GLI3	ENST00000375571.6|MAPRE1|ENSG00000101367.9|microtubule associated protein RP/EB family member 1
hg38_v1_chrX_+_108091665_108091674	0.194806	GLI3	ENST00000345734.7|ATG4A|ENSG00000101844.18|autophagy related 4A cysteine peptidase
hg38_v1_chr3_-_43622027_43622066	0.194791	GLI3	ENST00000427171.5|ANO10|ENSG00000160746.13|anoctamin 10
hg38_v1_chr17_-_67245165_67245211	0.194089	GLI3	ENST00000580168.5|HELZ|ENSG00000198265.12|helicase with zinc finger	ENST00000358691.10|HELZ|ENSG00000198265.12|helicase with zinc finger
hg38_v1_chr3_+_154121366_154121463	0.193132	GLI3	ENST00000465093.6|ARHGEF26|ENSG00000114790.13|Rho guanine nucleotide exchange factor 26	ENST00000496710.5|ARHGEF26|ENSG00000114790.13|Rho guanine nucleotide exchange factor 26	ENST00000465817.1|ARHGEF26|ENSG00000114790.13|Rho guanine nucleotide exchange factor 26
hg38_v1_chr16_+_80540980_80541030	0.192017	GLI3	ENST00000568035.5|DYNLRB2|ENSG00000168589.15|dynein light chain roadblock-type 2	ENST00000305904.11|DYNLRB2|ENSG00000168589.15|dynein light chain roadblock-type 2
hg38_v1_chr19_+_44643798_44643899	0.190847	GLI3	ENST00000344956.8|PVR|ENSG00000073008.15|PVR cell adhesion molecule
hg38_v1_chr10_+_70672457_70672543	0.190754	GLI3	ENST00000373207.2|ADAMTS14|ENSG00000138316.11|ADAM metallopeptidase with thrombospondin type 1 motif 14
hg38_v1_chr3_-_10292901_10292917	0.18953	GLI3	ENST00000430179.5|GHRL|ENSG00000157017.16|ghrelin and obestatin prepropeptide	ENST00000287656.11|GHRL|ENSG00000157017.16|ghrelin and obestatin prepropeptide	ENST00000437422.6|GHRL|ENSG00000157017.16|ghrelin and obestatin prepropeptide	ENST00000439975.6|GHRL|ENSG00000157017.16|ghrelin and obestatin prepropeptide	ENST00000446937.2|GHRL|ENSG00000157017.16|ghrelin and obestatin prepropeptide	ENST00000449238.6|GHRL|ENSG00000157017.16|ghrelin and obestatin prepropeptide	ENST00000457360.5|GHRL|ENSG00000157017.16|ghrelin and obestatin prepropeptide
hg38_v1_chr20_+_6006039_6006153	0.189044	GLI3	ENST00000452938.5|CRLS1|ENSG00000088766.12|cardiolipin synthase 1	ENST00000378863.9|CRLS1|ENSG00000088766.12|cardiolipin synthase 1
hg38_v1_chr10_+_103396607_103396691	0.188365	GLI3	ENST00000649849.1|PDCD11|ENSG00000148843.15|programmed cell death 11	ENST00000369797.8|PDCD11|ENSG00000148843.15|programmed cell death 11
hg38_v1_chr15_-_65286837_65286917	0.188357	GLI3	ENST00000444347.2|PARP16|ENSG00000138617.16|poly(ADP-ribose) polymerase family member 16	ENST00000261888.10|PARP16|ENSG00000138617.16|poly(ADP-ribose) polymerase family member 16	ENST00000649807.2|PARP16|ENSG00000138617.16|poly(ADP-ribose) polymerase family member 16
hg38_v1_chr20_+_35542038_35542130	0.188197	GLI3	ENST00000357394.8|ERGIC3|ENSG00000125991.20|ERGIC and golgi 3	ENST00000348547.7|ERGIC3|ENSG00000125991.20|ERGIC and golgi 3	ENST00000416206.5|ERGIC3|ENSG00000125991.20|ERGIC and golgi 3	ENST00000640748.1|ERGIC3|ENSG00000125991.20|ERGIC and golgi 3	ENST00000411577.5|ERGIC3|ENSG00000125991.20|ERGIC and golgi 3	ENST00000413587.5|ERGIC3|ENSG00000125991.20|ERGIC and golgi 3
hg38_v1_chr14_+_22515623_22515623	0.187912	GLI3	ENST00000390509.1|TRAJ28|ENSG00000211861.1|T cell receptor alpha joining 28
hg38_v1_chrX_-_53225176_53225225	0.187386	GLI3	ENST00000404049.7|KDM5C|ENSG00000126012.12|lysine demethylase 5C	ENST00000375401.8|KDM5C|ENSG00000126012.12|lysine demethylase 5C
hg38_v1_chr1_+_2050451_2050506	0.18659	GLI3	ENST00000468310.5|PRKCZ|ENSG00000067606.17|protein kinase C zeta
hg38_v1_chr19_+_57280438_57280507	0.186473	GLI3	ENST00000360338.4|ZNF460|ENSG00000197714.9|zinc finger protein 460
hg38_v1_chr8_+_96645221_96645272	0.186392	GLI3	ENST00000220763.10|CPQ|ENSG00000104324.16|carboxypeptidase Q
hg38_v1_chr10_+_112447198_112447282	0.186032	GLI3	ENST00000393077.3|VTI1A|ENSG00000151532.14|vesicle transport through interaction with t-SNAREs 1A	ENST00000432306.5|VTI1A|ENSG00000151532.14|vesicle transport through interaction with t-SNAREs 1A
hg38_v1_chr16_-_28491996_28492088	0.185793	GLI3	ENST00000568497.6|CLN3|ENSG00000188603.22|CLN3 lysosomal/endosomal transmembrane protein, battenin	ENST00000357857.14|CLN3|ENSG00000188603.22|CLN3 lysosomal/endosomal transmembrane protein, battenin	ENST00000395653.9|CLN3|ENSG00000188603.22|CLN3 lysosomal/endosomal transmembrane protein, battenin	ENST00000635973.1|CLN3|ENSG00000188603.22|CLN3 lysosomal/endosomal transmembrane protein, battenin	ENST00000568443.2|CLN3|ENSG00000188603.22|CLN3 lysosomal/endosomal transmembrane protein, battenin	ENST00000568558.6|CLN3|ENSG00000188603.22|CLN3 lysosomal/endosomal transmembrane protein, battenin	ENST00000565688.5|CLN3|ENSG00000188603.22|CLN3 lysosomal/endosomal transmembrane protein, battenin	ENST00000637100.1|CLN3|ENSG00000188603.22|CLN3 lysosomal/endosomal transmembrane protein, battenin	ENST00000359984.12|CLN3|ENSG00000188603.22|CLN3 lysosomal/endosomal transmembrane protein, battenin	ENST00000636147.2|CLN3|ENSG00000188603.22|CLN3 lysosomal/endosomal transmembrane protein, battenin	ENST00000567963.6|CLN3|ENSG00000188603.22|CLN3 lysosomal/endosomal transmembrane protein, battenin
hg38_v1_chr3_+_188153271_188153313	0.185744	GLI3	ENST00000448637.5|LPP|ENSG00000145012.14|LIM domain containing preferred translocation partner in lipoma
hg38_v1_chr20_+_49936371_49936412	0.185293	GLI3	ENST00000244061.6|RNF114|ENSG00000124226.11|ring finger protein 114	ENST00000625177.3|RNF114|ENSG00000124226.11|ring finger protein 114	ENST00000622920.1|RNF114|ENSG00000124226.11|ring finger protein 114
hg38_v1_chr3_+_184561768_184561795	0.185127	GLI3	ENST00000330394.3|EPHB3|ENSG00000182580.3|EPH receptor B3
hg38_v1_chr16_-_88686453_88686513	0.184933	GLI3	ENST00000332281.6|SNAI3|ENSG00000185669.6|snail family transcriptional repressor 3
hg38_v1_chr21_-_26843012_26843029	0.182885	GLI3	ENST00000517777.6|ADAMTS1|ENSG00000154734.16|ADAM metallopeptidase with thrombospondin type 1 motif 1
hg38_v1_chr2_-_223837484_223837550	0.182859	GLI3	ENST00000446015.6|AP1S3|ENSG00000152056.17|adaptor related protein complex 1 subunit sigma 3	ENST00000409375.1|AP1S3|ENSG00000152056.17|adaptor related protein complex 1 subunit sigma 3
hg38_v1_chr20_-_57525097_57525108	0.182307	GLI3	ENST00000423479.7|CTCFL|ENSG00000124092.13|CCCTC-binding factor like	ENST00000502686.6|CTCFL|ENSG00000124092.13|CCCTC-binding factor like	ENST00000433949.7|CTCFL|ENSG00000124092.13|CCCTC-binding factor like	ENST00000539382.5|CTCFL|ENSG00000124092.13|CCCTC-binding factor like	ENST00000608903.5|CTCFL|ENSG00000124092.13|CCCTC-binding factor like
hg38_v1_chr7_-_74254362_74254458	0.181323	GLI3	ENST00000352131.7|RFC2|ENSG00000049541.11|replication factor C subunit 2	ENST00000055077.8|RFC2|ENSG00000049541.11|replication factor C subunit 2	ENST00000621097.4|RFC2|ENSG00000049541.11|replication factor C subunit 2
hg38_v1_chr16_+_31472130_31472208	0.180562	GLI3	ENST00000394863.8|TGFB1I1|ENSG00000140682.19|transforming growth factor beta 1 induced transcript 1	ENST00000565360.5|TGFB1I1|ENSG00000140682.19|transforming growth factor beta 1 induced transcript 1	ENST00000361773.7|TGFB1I1|ENSG00000140682.19|transforming growth factor beta 1 induced transcript 1
hg38_v1_chr17_-_1516583_1516597	0.180213	GLI3	ENST00000449479.5|INPP5K|ENSG00000132376.20|inositol polyphosphate-5-phosphatase K
hg38_v1_chr19_+_43596480_43596531	0.17938	GLI3	ENST00000533118.5|ZNF576|ENSG00000124444.16|zinc finger protein 576
hg38_v1_chr12_+_123712333_123712410	0.178719	GLI3	ENST00000330342.8|ATP6V0A2|ENSG00000185344.15|ATPase H+ transporting V0 subunit a2	ENST00000613625.5|ATP6V0A2|ENSG00000185344.15|ATPase H+ transporting V0 subunit a2
hg38_v1_chr12_-_124863783_124863873	0.178021	GLI3	ENST00000546215.5|SCARB1|ENSG00000073060.17|scavenger receptor class B member 1	ENST00000415380.6|SCARB1|ENSG00000073060.17|scavenger receptor class B member 1	ENST00000545493.1|SCARB1|ENSG00000073060.17|scavenger receptor class B member 1	ENST00000261693.11|SCARB1|ENSG00000073060.17|scavenger receptor class B member 1	ENST00000680596.1|SCARB1|ENSG00000073060.17|scavenger receptor class B member 1
hg38_v1_chr9_-_112175264_112175279	0.177737	GLI3	ENST00000374264.6|SUSD1|ENSG00000106868.17|sushi domain containing 1
hg38_v1_chr6_+_36697810_36697835	0.177591	GLI3	ENST00000612677.6|RAB44|ENSG00000255587.9|RAB44, member RAS oncogene family
hg38_v1_chr19_-_41428730_41428730	0.177378	GLI3	ENST00000321702.2|B3GNT8|ENSG00000177191.2|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 8
hg38_v1_chr6_+_159761991_159762072	0.177322	GLI3	ENST00000367048.5|ACAT2|ENSG00000120437.9|acetyl-CoA acetyltransferase 2
hg38_v1_chr11_+_123430303_123430350	0.177247	GLI3	ENST00000640939.1|GRAMD1B|ENSG00000023171.19|GRAM domain containing 1B
hg38_v1_chr5_-_141680822_141680872	0.177079	GLI3	ENST00000504448.1|ARAP3|ENSG00000120318.16|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3
hg38_v1_chrX_+_17737697_17737725	0.176963	GLI3	ENST00000419185.1|SCML1|ENSG00000047634.15|Scm polycomb group protein like 1
hg38_v1_chr7_-_5967204_5967204	0.176453	GLI3	ENST00000337579.4|RSPH10B|ENSG00000155026.16|radial spoke head 10 homolog B
hg38_v1_chr8_+_22570944_22571116	0.175062	GLI3	ENST00000517962.1|SORBS3|ENSG00000120896.14|sorbin and SH3 domain containing 3
hg38_v1_chr17_+_74748648_74748671	0.174896	GLI3	ENST00000583369.5|SLC9A3R1|ENSG00000109062.12|SLC9A3 regulator 1
hg38_v1_chr22_-_45977154_45977169	0.174562	GLI3	ENST00000339464.9|WNT7B|ENSG00000188064.10|Wnt family member 7B
hg38_v1_chr12_-_122500947_122501073	0.174551	GLI3	ENST00000672018.1|ZCCHC8|ENSG00000033030.15|zinc finger CCHC-type containing 8
hg38_v1_chr9_+_129803175_129803268	0.174302	GLI3	ENST00000259339.7|TOR1B|ENSG00000136816.16|torsin family 1 member B	ENST00000427860.1|TOR1B|ENSG00000136816.16|torsin family 1 member B
hg38_v1_chr9_-_112175283_112175375	0.174146	GLI3	ENST00000374270.8|SUSD1|ENSG00000106868.17|sushi domain containing 1	ENST00000374263.7|SUSD1|ENSG00000106868.17|sushi domain containing 1
hg38_v1_chr14_+_24136152_24136240	0.172797	GLI3	ENST00000559123.5|PSME1|ENSG00000092010.15|proteasome activator subunit 1	ENST00000206451.11|PSME1|ENSG00000092010.15|proteasome activator subunit 1	ENST00000382708.7|PSME1|ENSG00000092010.15|proteasome activator subunit 1	ENST00000561435.5|PSME1|ENSG00000092010.15|proteasome activator subunit 1
hg38_v1_chr7_+_2645529_2645548	0.172571	GLI3	ENST00000400376.2|TTYH3|ENSG00000136295.15|tweety family member 3
hg38_v1_chr11_+_47257658_47257718	0.172553	GLI3	ENST00000412937.5|NR1H3|ENSG00000025434.19|nuclear receptor subfamily 1 group H member 3	ENST00000449369.5|NR1H3|ENSG00000025434.19|nuclear receptor subfamily 1 group H member 3
hg38_v1_chr16_+_57542635_57542670	0.172295	GLI3	ENST00000349457.8|ADGRG5|ENSG00000159618.16|adhesion G protein-coupled receptor G5
hg38_v1_chr1_+_23791138_23791192	0.171862	GLI3	ENST00000374514.8|LYPLA2|ENSG00000011009.11|lysophospholipase 2	ENST00000420982.5|LYPLA2|ENSG00000011009.11|lysophospholipase 2	ENST00000374505.6|LYPLA2|ENSG00000011009.11|lysophospholipase 2
hg38_v1_chr3_-_138132381_138132394	0.171686	GLI3	ENST00000236709.4|A4GNT|ENSG00000118017.4|alpha-1,4-N-acetylglucosaminyltransferase
hg38_v1_chr15_+_90935277_90935292	0.171577	GLI3	ENST00000418476.2|UNC45A|ENSG00000140553.18|unc-45 myosin chaperone A
hg38_v1_chr1_-_1116075_1116115	0.171422	GLI3	ENST00000379339.5|C1orf159|ENSG00000131591.18|chromosome 1 open reading frame 159	ENST00000421241.7|C1orf159|ENSG00000131591.18|chromosome 1 open reading frame 159	ENST00000480643.1|C1orf159|ENSG00000131591.18|chromosome 1 open reading frame 159	ENST00000434641.5|C1orf159|ENSG00000131591.18|chromosome 1 open reading frame 159
hg38_v1_chr19_+_3721719_3721752	0.171278	GLI3	ENST00000589378.5|TJP3|ENSG00000105289.15|tight junction protein 3
hg38_v1_chr1_+_203626775_203626807	0.171129	GLI3	ENST00000367218.7|ATP2B4|ENSG00000058668.15|ATPase plasma membrane Ca2+ transporting 4
hg38_v1_chr1_+_1308587_1308653	0.169904	GLI3	ENST00000379031.10|PUSL1|ENSG00000169972.12|pseudouridine synthase like 1
hg38_v1_chr17_-_8630713_8630738	0.168614	GLI3	ENST00000411957.1|MYH10|ENSG00000133026.13|myosin heavy chain 10	ENST00000360416.8|MYH10|ENSG00000133026.13|myosin heavy chain 10
hg38_v1_chr22_-_17773976_17774016	0.168477	GLI3	ENST00000317361.11|BID|ENSG00000015475.19|BH3 interacting domain death agonist
hg38_v1_chr6_+_52420107_52420328	0.168255	GLI3	ENST00000636489.1|EFHC1|ENSG00000096093.16|EF-hand domain containing 1	ENST00000637089.1|EFHC1|ENSG00000096093.16|EF-hand domain containing 1	ENST00000637353.1|EFHC1|ENSG00000096093.16|EF-hand domain containing 1	ENST00000637263.1|EFHC1|ENSG00000096093.16|EF-hand domain containing 1
hg38_v1_chrX_+_108091752_108091794	0.168206	GLI3	ENST00000457035.5|ATG4A|ENSG00000101844.18|autophagy related 4A cysteine peptidase	ENST00000372232.8|ATG4A|ENSG00000101844.18|autophagy related 4A cysteine peptidase
hg38_v1_chr3_-_136196559_136196597	0.167611	GLI3	ENST00000491050.1|MSL2|ENSG00000174579.4|MSL complex subunit 2
hg38_v1_chr4_-_89837076_89837103	0.166802	GLI3	ENST00000506691.1|SNCA|ENSG00000145335.17|synuclein alpha
hg38_v1_chr15_-_42273408_42273440	0.166609	GLI3	ENST00000389834.9|TMEM87A|ENSG00000103978.16|transmembrane protein 87A	ENST00000307216.10|TMEM87A|ENSG00000103978.16|transmembrane protein 87A
hg38_v1_chr3_-_185821092_185821147	0.166273	GLI3	ENST00000421047.3|IGF2BP2|ENSG00000073792.16|insulin like growth factor 2 mRNA binding protein 2
hg38_v1_chr1_-_157138474_157138555	0.165685	GLI3	ENST00000326786.4|ETV3|ENSG00000117036.12|ETS variant transcription factor 3
hg38_v1_chr10_-_70283998_70284011	0.165628	GLI3	ENST00000277942.7|NPFFR1|ENSG00000148734.8|neuropeptide FF receptor 1
hg38_v1_chr5_-_157142839_157142882	0.164266	GLI3	ENST00000286317.6|MED7|ENSG00000155868.8|mediator complex subunit 7	ENST00000524219.1|HAVCR2|ENSG00000135077.9|hepatitis A virus cellular receptor 2
hg38_v1_chr12_-_52473798_52473812	0.163162	GLI3	ENST00000252250.7|KRT6C|ENSG00000170465.10|keratin 6C
hg38_v1_chr8_-_27605271_27605354	0.163053	GLI3	ENST00000522098.1|CLU|ENSG00000120885.22|clusterin
hg38_v1_chr11_-_116823293_116823313	0.1628	GLI3	ENST00000357780.5|APOA4|ENSG00000110244.7|apolipoprotein A4
hg38_v1_chr16_+_2682515_2682540	0.162752	GLI3	ENST00000301738.9|KCTD5|ENSG00000167977.9|potassium channel tetramerization domain containing 5	ENST00000564195.1|KCTD5|ENSG00000167977.9|potassium channel tetramerization domain containing 5
hg38_v1_chr11_+_19813704_19813741	0.162628	GLI3	ENST00000650578.1|NAV2|ENSG00000166833.22|neuron navigator 2
hg38_v1_chr15_-_101277287_101277507	0.162033	GLI3	ENST00000528346.1|SELENOS|ENSG00000131871.15|selenoprotein S	ENST00000531964.5|SELENOS|ENSG00000131871.15|selenoprotein S	ENST00000398226.7|SELENOS|ENSG00000131871.15|selenoprotein S	ENST00000526049.6|SELENOS|ENSG00000131871.15|selenoprotein S
hg38_v1_chr17_-_15619704_15619704	0.161978	GLI3	ENST00000395906.8|CDRT1|ENSG00000241322.11|CMT1A duplicated region transcript 1
hg38_v1_chr5_-_181130577_181130577	0.161664	GLI3	ENST00000641318.1|OR2V1|ENSG00000185372.4|olfactory receptor family 2 subfamily V member 1	ENST00000641367.1|OR2V1|ENSG00000185372.4|olfactory receptor family 2 subfamily V member 1	ENST00000642036.1|OR2V1|ENSG00000185372.4|olfactory receptor family 2 subfamily V member 1
hg38_v1_chr12_+_130162456_130162474	0.161505	GLI3	ENST00000539839.1|FZD10|ENSG00000111432.5|frizzled class receptor 10	ENST00000229030.5|FZD10|ENSG00000111432.5|frizzled class receptor 10
hg38_v1_chr17_-_8630749_8630770	0.161192	GLI3	ENST00000379980.8|MYH10|ENSG00000133026.13|myosin heavy chain 10	ENST00000269243.8|MYH10|ENSG00000133026.13|myosin heavy chain 10
hg38_v1_chr19_-_23250375_23250400	0.161094	GLI3	ENST00000597537.1|ZNF724|ENSG00000196081.10|zinc finger protein 724	ENST00000597037.1|ZNF724|ENSG00000196081.10|zinc finger protein 724	ENST00000418100.6|ZNF724|ENSG00000196081.10|zinc finger protein 724
hg38_v1_chr2_+_216499068_216499140	0.160781	GLI3	ENST00000456586.5|RPL37A|ENSG00000197756.10|ribosomal protein L37a	ENST00000427280.6|RPL37A|ENSG00000197756.10|ribosomal protein L37a	ENST00000598925.5|RPL37A|ENSG00000197756.10|ribosomal protein L37a	ENST00000441179.2|RPL37A|ENSG00000197756.10|ribosomal protein L37a
hg38_v1_chr3_-_9986682_9986868	0.160639	GLI3	ENST00000429759.5|EMC3|ENSG00000125037.12|ER membrane protein complex subunit 3
hg38_v1_chr3_-_129183874_129183928	0.159654	GLI3	ENST00000422453.7|CNBP|ENSG00000169714.17|CCHC-type zinc finger nucleic acid binding protein	ENST00000451728.6|CNBP|ENSG00000169714.17|CCHC-type zinc finger nucleic acid binding protein	ENST00000446936.6|CNBP|ENSG00000169714.17|CCHC-type zinc finger nucleic acid binding protein	ENST00000502976.5|CNBP|ENSG00000169714.17|CCHC-type zinc finger nucleic acid binding protein	ENST00000500450.6|CNBP|ENSG00000169714.17|CCHC-type zinc finger nucleic acid binding protein	ENST00000441626.6|CNBP|ENSG00000169714.17|CCHC-type zinc finger nucleic acid binding protein	ENST00000504813.5|CNBP|ENSG00000169714.17|CCHC-type zinc finger nucleic acid binding protein	ENST00000512338.1|CNBP|ENSG00000169714.17|CCHC-type zinc finger nucleic acid binding protein
hg38_v1_chr21_+_46635595_46635696	0.159416	GLI3	ENST00000451211.6|PRMT2|ENSG00000160310.18|protein arginine methyltransferase 2	ENST00000458387.6|PRMT2|ENSG00000160310.18|protein arginine methyltransferase 2	ENST00000397638.6|PRMT2|ENSG00000160310.18|protein arginine methyltransferase 2	ENST00000291705.11|PRMT2|ENSG00000160310.18|protein arginine methyltransferase 2	ENST00000397637.5|PRMT2|ENSG00000160310.18|protein arginine methyltransferase 2	ENST00000334494.8|PRMT2|ENSG00000160310.18|protein arginine methyltransferase 2	ENST00000397628.5|PRMT2|ENSG00000160310.18|protein arginine methyltransferase 2	ENST00000355680.8|PRMT2|ENSG00000160310.18|protein arginine methyltransferase 2	ENST00000440086.5|PRMT2|ENSG00000160310.18|protein arginine methyltransferase 2
hg38_v1_chr2_-_177392673_177392704	0.158832	GLI3	ENST00000447413.1|ENSG00000213963.6|ENSG00000213963.6|novel transcript	ENST00000397057.6|ENSG00000213963.6|ENSG00000213963.6|novel transcript	ENST00000456746.5|ENSG00000213963.6|ENSG00000213963.6|novel transcript	ENST00000464747.5|NFE2L2|ENSG00000116044.16|nuclear factor, erythroid 2 like 2
hg38_v1_chr11_+_121590388_121590419	0.15856	GLI3	ENST00000527934.1|SORL1|ENSG00000137642.13|sortilin related receptor 1
hg38_v1_chr8_-_58659534_58659590	0.158084	GLI3	ENST00000427130.6|NSMAF|ENSG00000035681.9|neutral sphingomyelinase activation associated factor
hg38_v1_chr19_+_35533436_35533462	0.157976	GLI3	ENST00000222286.9|GAPDHS|ENSG00000105679.9|glyceraldehyde-3-phosphate dehydrogenase, spermatogenic
hg38_v1_chr17_-_64506616_64506731	0.157854	GLI3	ENST00000581697.5|DDX5|ENSG00000108654.16|DEAD-box helicase 5	ENST00000450599.7|DDX5|ENSG00000108654.16|DEAD-box helicase 5	ENST00000577922.6|DDX5|ENSG00000108654.16|DEAD-box helicase 5
hg38_v1_chr1_+_149477960_149477960	0.157419	GLI3	ENST00000369227.7|NBPF19|ENSG00000271383.8|NBPF member 19
hg38_v1_chr10_-_112447563_112447583	0.156911	GLI3	ENST00000682267.1|ZDHHC6|ENSG00000023041.12|zinc finger DHHC-type palmitoyltransferase 6
hg38_v1_chr16_+_22513058_22513058	0.15656	GLI3	ENST00000536620.1|NPIPB5|ENSG00000243716.10|nuclear pore complex interacting protein family member B5
hg38_v1_chr17_-_56914032_56914100	0.156515	GLI3	ENST00000537230.3|TRIM25|ENSG00000121060.19|tripartite motif containing 25	ENST00000316881.9|TRIM25|ENSG00000121060.19|tripartite motif containing 25
hg38_v1_chr3_-_88058928_88059029	0.156348	GLI3	ENST00000482016.6|CGGBP1|ENSG00000163320.12|CGG triplet repeat binding protein 1
hg38_v1_chr11_-_61357304_61357347	0.156099	GLI3	ENST00000542361.5|CYB561A3|ENSG00000162144.10|cytochrome b561 family member A3
hg38_v1_chr17_+_77405070_77405090	0.156013	GLI3	ENST00000585930.5|SEPTIN9|ENSG00000184640.20|septin 9
hg38_v1_chr13_+_31739520_31739531	0.154278	GLI3	ENST00000298386.7|RXFP2|ENSG00000133105.8|relaxin family peptide receptor 2
hg38_v1_chrX_-_109733249_109733272	0.153519	GLI3	ENST00000469796.7|ACSL4|ENSG00000068366.21|acyl-CoA synthetase long chain family member 4	ENST00000672401.1|ACSL4|ENSG00000068366.21|acyl-CoA synthetase long chain family member 4	ENST00000671846.1|ACSL4|ENSG00000068366.21|acyl-CoA synthetase long chain family member 4
hg38_v1_chr7_+_142455120_142455174	0.153114	GLI3	ENST00000390369.2|TRBV7-4|ENSG00000253409.1|T cell receptor beta variable 7-4
hg38_v1_chr19_-_9858139_9858187	0.152813	GLI3	ENST00000590841.5|OLFM2|ENSG00000105088.9|olfactomedin 2
hg38_v1_chrX_-_109733220_109733248	0.152693	GLI3	ENST00000672282.1|ACSL4|ENSG00000068366.21|acyl-CoA synthetase long chain family member 4	ENST00000340800.7|ACSL4|ENSG00000068366.21|acyl-CoA synthetase long chain family member 4
hg38_v1_chr5_-_168883333_168883345	0.152336	GLI3	ENST00000404867.7|SLIT3|ENSG00000184347.15|slit guidance ligand 3
hg38_v1_chr3_+_133400046_133400081	0.151658	GLI3	ENST00000302334.3|BFSP2|ENSG00000170819.5|beaded filament structural protein 2
hg38_v1_chr2_+_60881515_60881552	0.151458	GLI3	ENST00000295025.12|REL|ENSG00000162924.15|REL proto-oncogene, NF-kB subunit
hg38_v1_chr2_+_106487349_106487413	0.150711	GLI3	ENST00000643224.2|CD8B2|ENSG00000254126.8|CD8b2 molecule	ENST00000416057.2|CD8B2|ENSG00000254126.8|CD8b2 molecule
hg38_v1_chr3_-_10292933_10292953	0.150626	GLI3	ENST00000429122.1|GHRL|ENSG00000157017.16|ghrelin and obestatin prepropeptide	ENST00000425479.1|GHRL|ENSG00000157017.16|ghrelin and obestatin prepropeptide	ENST00000335542.13|GHRL|ENSG00000157017.16|ghrelin and obestatin prepropeptide
hg38_v1_chr17_-_1516601_1516619	0.150442	GLI3	ENST00000421807.7|INPP5K|ENSG00000132376.20|inositol polyphosphate-5-phosphatase K	ENST00000477910.5|INPP5K|ENSG00000132376.20|inositol polyphosphate-5-phosphatase K	ENST00000575172.5|INPP5K|ENSG00000132376.20|inositol polyphosphate-5-phosphatase K
hg38_v1_chr1_-_11805977_11806063	0.149711	GLI3	ENST00000376486.3|MTHFR|ENSG00000177000.13|methylenetetrahydrofolate reductase
hg38_v1_chr10_+_102644990_102645154	0.149662	GLI3	ENST00000645961.1|TRIM8|ENSG00000171206.15|tripartite motif containing 8
hg38_v1_chr8_+_120125093_120125115	0.149413	GLI3	ENST00000297848.8|COL14A1|ENSG00000187955.12|collagen type XIV alpha 1 chain	ENST00000309791.8|COL14A1|ENSG00000187955.12|collagen type XIV alpha 1 chain
hg38_v1_chr22_-_42270587_42270667	0.149239	GLI3	ENST00000677622.1|TCF20|ENSG00000100207.21|transcription factor 20
hg38_v1_chr19_-_2456924_2456983	0.149179	GLI3	ENST00000325327.4|LMNB2|ENSG00000176619.13|lamin B2
hg38_v1_chr11_+_46311149_46311166	0.149153	GLI3	ENST00000530518.1|CREB3L1|ENSG00000157613.11|cAMP responsive element binding protein 3 like 1
hg38_v1_chrX_-_108736556_108736569	0.148532	GLI3	ENST00000372129.4|IRS4|ENSG00000133124.12|insulin receptor substrate 4
hg38_v1_chr12_-_122500924_122500946	0.147915	GLI3	ENST00000633063.3|ZCCHC8|ENSG00000033030.15|zinc finger CCHC-type containing 8
hg38_v1_chr6_-_31902041_31902107	0.147786	GLI3	ENST00000375527.3|ZBTB12|ENSG00000204366.4|zinc finger and BTB domain containing 12
hg38_v1_chr11_+_70085413_70085459	0.147103	GLI3	ENST00000316296.9|ANO1|ENSG00000131620.17|anoctamin 1	ENST00000530676.5|ANO1|ENSG00000131620.17|anoctamin 1
hg38_v1_chr20_+_62796432_62796511	0.146788	GLI3	ENST00000370487.5|MRGBP|ENSG00000101189.7|MRG domain binding protein
hg38_v1_chr17_-_7857938_7858079	0.146529	GLI3	ENST00000575208.2|NAA38|ENSG00000183011.14|N-alpha-acetyltransferase 38, NatC auxiliary subunit
hg38_v1_chr12_+_54549586_54549654	0.146298	GLI3	ENST00000243052.8|PDE1B|ENSG00000123360.12|phosphodiesterase 1B
hg38_v1_chr16_+_68539737_68539795	0.145737	GLI3	ENST00000398253.6|ZFP90|ENSG00000184939.16|ZFP90 zinc finger protein	ENST00000573161.1|ZFP90|ENSG00000184939.16|ZFP90 zinc finger protein
hg38_v1_chr1_-_225924228_225924340	0.14536	GLI3	ENST00000343818.11|PYCR2|ENSG00000143811.19|pyrroline-5-carboxylate reductase 2	ENST00000432920.2|ENSG00000255835.1|ENSG00000255835.1|novel protein	ENST00000612039.4|PYCR2|ENSG00000143811.19|pyrroline-5-carboxylate reductase 2
hg38_v1_chr8_-_142614469_142614485	0.144536	GLI3	ENST00000356613.4|ARC|ENSG00000198576.4|activity regulated cytoskeleton associated protein
hg38_v1_chr14_-_50830641_50830708	0.144446	GLI3	ENST00000453196.6|NIN|ENSG00000100503.26|ninein	ENST00000496749.1|NIN|ENSG00000100503.26|ninein
hg38_v1_chr1_-_11805924_11805948	0.143856	GLI3	ENST00000418034.1|MTHFR|ENSG00000177000.13|methylenetetrahydrofolate reductase
hg38_v1_chr15_-_25863304_25863371	0.143852	GLI3	ENST00000555815.6|ATP10A|ENSG00000206190.12|ATPase phospholipid transporting 10A (putative)	ENST00000673716.1|ATP10A|ENSG00000206190.12|ATPase phospholipid transporting 10A (putative)
hg38_v1_chr15_-_76059755_76059802	0.143723	GLI3	ENST00000563910.5|NRG4|ENSG00000169752.17|neuregulin 4
hg38_v1_chr19_+_4153616_4153668	0.142399	GLI3	ENST00000078445.7|CREB3L3|ENSG00000060566.14|cAMP responsive element binding protein 3 like 3	ENST00000595923.5|CREB3L3|ENSG00000060566.14|cAMP responsive element binding protein 3 like 3	ENST00000602257.5|CREB3L3|ENSG00000060566.14|cAMP responsive element binding protein 3 like 3	ENST00000602147.1|CREB3L3|ENSG00000060566.14|cAMP responsive element binding protein 3 like 3
hg38_v1_chr8_+_89902682_89902761	0.142194	GLI3	ENST00000520659.1|OSGIN2|ENSG00000164823.11|oxidative stress induced growth inhibitor family member 2
hg38_v1_chr6_+_162727941_162728011	0.142098	GLI3	ENST00000366888.6|PACRG|ENSG00000112530.11|parkin coregulated
hg38_v1_chr14_-_100587404_100587430	0.141368	GLI3	ENST00000554140.2|BEGAIN|ENSG00000183092.17|brain enriched guanylate kinase associated
hg38_v1_chr12_+_4269771_4269791	0.141205	GLI3	ENST00000676411.1|CCND2|ENSG00000118971.9|cyclin D2
hg38_v1_chr2_+_96325294_96325355	0.141092	GLI3	ENST00000439118.3|ITPRIPL1|ENSG00000198885.10|ITPRIP like 1	ENST00000420176.5|ITPRIPL1|ENSG00000198885.10|ITPRIP like 1	ENST00000536814.1|ITPRIPL1|ENSG00000198885.10|ITPRIP like 1
hg38_v1_chr17_-_27800524_27800530	0.140849	GLI3	ENST00000313735.11|NOS2|ENSG00000007171.18|nitric oxide synthase 2
hg38_v1_chr1_-_156500723_156500753	0.140284	GLI3	ENST00000368240.6|MEF2D|ENSG00000116604.18|myocyte enhancer factor 2D
hg38_v1_chr15_+_75195613_75195643	0.140231	GLI3	ENST00000563905.5|C15orf39|ENSG00000167173.19|chromosome 15 open reading frame 39
hg38_v1_chr19_+_40601342_40601389	0.140062	GLI3	ENST00000396819.8|LTBP4|ENSG00000090006.18|latent transforming growth factor beta binding protein 4
hg38_v1_chr2_-_241637045_241637186	0.139877	GLI3	ENST00000407315.6|THAP4|ENSG00000176946.12|THAP domain containing 4
hg38_v1_chr2_+_69742125_69742141	0.139824	GLI3	ENST00000394295.6|ANXA4|ENSG00000196975.16|annexin A4
hg38_v1_chr15_+_28919367_28919432	0.139523	GLI3	ENST00000558804.5|APBA2|ENSG00000034053.15|amyloid beta precursor protein binding family A member 2
hg38_v1_chr19_+_9247344_9247344	0.139459	GLI3	ENST00000641946.1|OR7E24|ENSG00000237521.4|olfactory receptor family 7 subfamily E member 24
hg38_v1_chr1_-_11805949_11805972	0.139164	GLI3	ENST00000376590.9|MTHFR|ENSG00000177000.13|methylenetetrahydrofolate reductase
hg38_v1_chr17_-_352784_352842	0.13875	GLI3	ENST00000577079.5|RPH3AL|ENSG00000181031.16|rabphilin 3A like (without C2 domains)	ENST00000331302.12|RPH3AL|ENSG00000181031.16|rabphilin 3A like (without C2 domains)	ENST00000618002.4|RPH3AL|ENSG00000181031.16|rabphilin 3A like (without C2 domains)	ENST00000536489.6|RPH3AL|ENSG00000181031.16|rabphilin 3A like (without C2 domains)
hg38_v1_chr5_+_140639419_140639483	0.138249	GLI3	ENST00000513002.5|TMCO6|ENSG00000113119.13|transmembrane and coiled-coil domains 6	ENST00000394671.8|TMCO6|ENSG00000113119.13|transmembrane and coiled-coil domains 6
hg38_v1_chr19_+_41310148_41310273	0.137686	GLI3	ENST00000269967.4|CCDC97|ENSG00000142039.4|coiled-coil domain containing 97
hg38_v1_chr20_+_33168148_33168166	0.13735	GLI3	ENST00000354932.6|BPIFA2|ENSG00000131050.11|BPI fold containing family A member 2
hg38_v1_chr3_-_45915596_45915659	0.137324	GLI3	ENST00000472635.5|LZTFL1|ENSG00000163818.19|leucine zipper transcription factor like 1	ENST00000492333.5|LZTFL1|ENSG00000163818.19|leucine zipper transcription factor like 1
hg38_v1_chrX_-_79367307_79367380	0.13664	GLI3	ENST00000373298.7|ITM2A|ENSG00000078596.11|integral membrane protein 2A
hg38_v1_chr5_+_149960719_149960795	0.136366	GLI3	ENST00000286298.5|SLC26A2|ENSG00000155850.8|solute carrier family 26 member 2	ENST00000433184.1|SLC26A2|ENSG00000155850.8|solute carrier family 26 member 2
hg38_v1_chr4_+_17810945_17811004	0.136255	GLI3	ENST00000251496.7|NCAPG|ENSG00000109805.10|non-SMC condensin I complex subunit G
hg38_v1_chr17_+_75087943_75088008	0.135694	GLI3	ENST00000329783.9|SLC16A5|ENSG00000170190.16|solute carrier family 16 member 5	ENST00000578376.5|SLC16A5|ENSG00000170190.16|solute carrier family 16 member 5
hg38_v1_chr14_-_91510530_91510561	0.134915	GLI3	ENST00000557018.5|PPP4R3A|ENSG00000100796.18|protein phosphatase 4 regulatory subunit 3A
hg38_v1_chr1_-_39575686_39575913	0.134216	GLI3	ENST00000677006.1|PABPC4|ENSG00000090621.15|poly(A) binding protein cytoplasmic 4	ENST00000678625.1|PABPC4|ENSG00000090621.15|poly(A) binding protein cytoplasmic 4	ENST00000677609.1|PABPC4|ENSG00000090621.15|poly(A) binding protein cytoplasmic 4
hg38_v1_chr17_-_752038_752185	0.134054	GLI3	ENST00000574958.1|GEMIN4|ENSG00000179409.11|gem nuclear organelle associated protein 4	ENST00000437269.1|GEMIN4|ENSG00000179409.11|gem nuclear organelle associated protein 4	ENST00000573482.5|GEMIN4|ENSG00000179409.11|gem nuclear organelle associated protein 4
hg38_v1_chr3_+_45026296_45026314	0.133778	GLI3	ENST00000296130.5|CLEC3B|ENSG00000163815.6|C-type lectin domain family 3 member B
hg38_v1_chr21_-_26843063_26843075	0.133684	GLI3	ENST00000678221.1|ADAMTS1|ENSG00000154734.16|ADAM metallopeptidase with thrombospondin type 1 motif 1
hg38_v1_chr17_+_76000906_76000906	0.133471	GLI3	ENST00000448471.2|CDK3|ENSG00000250506.8|cyclin dependent kinase 3
hg38_v1_chr19_-_2085324_2085392	0.133348	GLI3	ENST00000591638.1|MOB3A|ENSG00000172081.14|MOB kinase activator 3A
hg38_v1_chr7_-_29195186_29195276	0.133107	GLI3	ENST00000449801.5|CPVL|ENSG00000106066.15|carboxypeptidase vitellogenic like	ENST00000409850.5|CPVL|ENSG00000106066.15|carboxypeptidase vitellogenic like
hg38_v1_chr18_-_77132757_77132769	0.133097	GLI3	ENST00000397860.7|MBP|ENSG00000197971.16|myelin basic protein
hg38_v1_chr1_-_244859297_244859374	0.132546	GLI3	ENST00000483966.3|HNRNPU|ENSG00000153187.20|heterogeneous nuclear ribonucleoprotein U
hg38_v1_chr1_-_153613095_153613153	0.132293	GLI3	ENST00000368706.9|S100A16|ENSG00000188643.11|S100 calcium binding protein A16
hg38_v1_chrX_+_152917830_152917900	0.131755	GLI3	ENST00000318529.12|ZNF185|ENSG00000147394.18|zinc finger protein 185 with LIM domain
hg38_v1_chr9_+_128702485_128702558	0.131289	GLI3	ENST00000291906.5|PKN3|ENSG00000160447.7|protein kinase N3
hg38_v1_chr10_+_102743938_102743997	0.130192	GLI3	ENST00000448841.7|WBP1L|ENSG00000166272.18|WW domain binding protein 1 like
hg38_v1_chr17_+_32928126_32928210	0.129298	GLI3	ENST00000579849.6|TMEM98|ENSG00000006042.12|transmembrane protein 98	ENST00000578289.5|TMEM98|ENSG00000006042.12|transmembrane protein 98	ENST00000439138.5|TMEM98|ENSG00000006042.12|transmembrane protein 98
hg38_v1_chr11_-_1763894_1763957	0.129033	GLI3	ENST00000637915.1|CTSD|ENSG00000117984.15|cathepsin D	ENST00000637815.2|CTSD|ENSG00000117984.15|cathepsin D	ENST00000236671.7|CTSD|ENSG00000117984.15|cathepsin D	ENST00000636571.1|CTSD|ENSG00000117984.15|cathepsin D	ENST00000438213.6|CTSD|ENSG00000117984.15|cathepsin D	ENST00000636397.1|ENSG00000250644.3|ENSG00000250644.3|novel protein	ENST00000637387.1|CTSD|ENSG00000117984.15|cathepsin D	ENST00000636843.1|CTSD|ENSG00000117984.15|cathepsin D	ENST00000636615.1|ENSG00000250644.3|ENSG00000250644.3|novel protein
hg38_v1_chr6_+_36027796_36027824	0.128694	GLI3	ENST00000229794.9|MAPK14|ENSG00000112062.11|mitogen-activated protein kinase 14
hg38_v1_chr7_-_4883683_4883727	0.128313	GLI3	ENST00000399583.4|RADIL|ENSG00000157927.17|Rap associating with DIL domain
hg38_v1_chr21_-_26573211_26573305	0.127605	GLI3	ENST00000299340.9|CYYR1|ENSG00000166265.13|cysteine and tyrosine rich 1	ENST00000652641.2|CYYR1|ENSG00000166265.13|cysteine and tyrosine rich 1
hg38_v1_chr12_-_2857026_2857043	0.12754	GLI3	ENST00000637658.2|TEX52|ENSG00000283297.2|testis expressed 52
hg38_v1_chr8_-_11853470_11853483	0.127429	GLI3	ENST00000679121.1|CTSB|ENSG00000164733.22|cathepsin B
hg38_v1_chrX_+_49053554_49053584	0.126768	GLI3	ENST00000597275.5|CCDC120|ENSG00000147144.13|coiled-coil domain containing 120
hg38_v1_chr3_+_159764199_159764216	0.126676	GLI3	ENST00000639448.1|IQCJ-SCHIP1|ENSG00000283154.2|IQCJ-SCHIP1 readthrough
hg38_v1_chr16_-_5066024_5066110	0.126212	GLI3	ENST00000315997.5|C16orf89|ENSG00000153446.16|chromosome 16 open reading frame 89
hg38_v1_chr6_+_52420332_52420384	0.125718	GLI3	ENST00000636107.1|EFHC1|ENSG00000096093.16|EF-hand domain containing 1	ENST00000371068.11|EFHC1|ENSG00000096093.16|EF-hand domain containing 1	ENST00000636702.1|EFHC1|ENSG00000096093.16|EF-hand domain containing 1	ENST00000635996.1|EFHC1|ENSG00000096093.16|EF-hand domain containing 1	ENST00000636379.1|EFHC1|ENSG00000096093.16|EF-hand domain containing 1
hg38_v1_chr13_-_77027181_77027201	0.125338	GLI3	ENST00000417323.1|FBXL3|ENSG00000005812.11|F-box and leucine rich repeat protein 3
hg38_v1_chr1_+_206453199_206453199	0.125314	GLI3	ENST00000604010.1|SRGAP2|ENSG00000266028.8|SLIT-ROBO Rho GTPase activating protein 2
hg38_v1_chr17_+_7886178_7886197	0.124968	GLI3	ENST00000672274.1|CHD3|ENSG00000170004.18|chromodomain helicase DNA binding protein 3
hg38_v1_chr6_-_36757380_36757411	0.124933	GLI3	ENST00000393189.2|CPNE5|ENSG00000124772.12|copine 5
hg38_v1_chr10_-_103452384_103452426	0.124069	GLI3	ENST00000369788.7|CALHM2|ENSG00000138172.11|calcium homeostasis modulator family member 2
hg38_v1_chr20_+_9068656_9068807	0.123995	GLI3	ENST00000407043.6|PLCB4|ENSG00000101333.18|phospholipase C beta 4	ENST00000441846.5|PLCB4|ENSG00000101333.18|phospholipase C beta 4
hg38_v1_chr11_+_2386057_2386095	0.123864	GLI3	ENST00000381036.7|CD81|ENSG00000110651.12|CD81 molecule	ENST00000492252.5|CD81|ENSG00000110651.12|CD81 molecule
hg38_v1_chr13_+_31739542_31739562	0.123764	GLI3	ENST00000380314.2|RXFP2|ENSG00000133105.8|relaxin family peptide receptor 2
hg38_v1_chr19_-_54339146_54339177	0.123734	GLI3	ENST00000291759.5|LILRA4|ENSG00000239961.3|leukocyte immunoglobulin like receptor A4
hg38_v1_chr3_+_184363351_184363367	0.12371	GLI3	ENST00000443489.5|POLR2H|ENSG00000163882.9|RNA polymerase II, I and III subunit H
hg38_v1_chr6_+_28141830_28141915	0.123519	GLI3	ENST00000330236.7|ZKSCAN8|ENSG00000198315.11|zinc finger with KRAB and SCAN domains 8
hg38_v1_chr8_-_93740718_93740780	0.123404	GLI3	ENST00000519109.6|RBM12B|ENSG00000183808.12|RNA binding motif protein 12B
hg38_v1_chr17_-_35795592_35795707	0.122777	GLI3	ENST00000615136.4|MMP28|ENSG00000271447.6|matrix metallopeptidase 28	ENST00000605424.6|MMP28|ENSG00000271447.6|matrix metallopeptidase 28	ENST00000612672.1|MMP28|ENSG00000271447.6|matrix metallopeptidase 28
hg38_v1_chr17_-_75855204_75855420	0.12251	GLI3	ENST00000589642.5|WBP2|ENSG00000132471.12|WW domain binding protein 2	ENST00000593002.1|WBP2|ENSG00000132471.12|WW domain binding protein 2	ENST00000590221.5|WBP2|ENSG00000132471.12|WW domain binding protein 2	ENST00000587374.5|WBP2|ENSG00000132471.12|WW domain binding protein 2	ENST00000585462.5|WBP2|ENSG00000132471.12|WW domain binding protein 2	ENST00000254806.8|WBP2|ENSG00000132471.12|WW domain binding protein 2	ENST00000433525.6|WBP2|ENSG00000132471.12|WW domain binding protein 2	ENST00000626827.2|WBP2|ENSG00000132471.12|WW domain binding protein 2
hg38_v1_chr3_-_33440510_33440623	0.121767	GLI3	ENST00000283628.9|UBP1|ENSG00000153560.12|upstream binding protein 1	ENST00000456378.1|UBP1|ENSG00000153560.12|upstream binding protein 1
hg38_v1_chr19_+_39342396_39342468	0.120641	GLI3	ENST00000602243.5|SAMD4B|ENSG00000179134.15|sterile alpha motif domain containing 4B	ENST00000598913.5|SAMD4B|ENSG00000179134.15|sterile alpha motif domain containing 4B	ENST00000314471.10|SAMD4B|ENSG00000179134.15|sterile alpha motif domain containing 4B
hg38_v1_chr22_+_46267997_46268040	0.12038	GLI3	ENST00000421359.5|TTC38|ENSG00000075234.17|tetratricopeptide repeat domain 38	ENST00000381031.8|TTC38|ENSG00000075234.17|tetratricopeptide repeat domain 38	ENST00000629918.1|TTC38|ENSG00000075234.17|tetratricopeptide repeat domain 38
hg38_v1_chr10_-_75401746_75401772	0.119622	GLI3	ENST00000372524.5|ZNF503|ENSG00000165655.17|zinc finger protein 503
hg38_v1_chr7_+_76472062_76472062	0.119585	GLI3	ENST00000429179.1|DTX2|ENSG00000091073.20|deltex E3 ubiquitin ligase 2
hg38_v1_chr12_-_89524734_89524830	0.119251	GLI3	ENST00000529983.3|GALNT4|ENSG00000257594.4|polypeptide N-acetylgalactosaminyltransferase 4
hg38_v1_chr7_+_38178318_38178401	0.119235	GLI3	ENST00000396013.5|STARD3NL|ENSG00000010270.14|STARD3 N-terminal like	ENST00000440144.5|STARD3NL|ENSG00000010270.14|STARD3 N-terminal like	ENST00000453225.5|STARD3NL|ENSG00000010270.14|STARD3 N-terminal like	ENST00000429075.1|STARD3NL|ENSG00000010270.14|STARD3 N-terminal like
hg38_v1_chr15_-_40755223_40755336	0.118644	GLI3	ENST00000560460.5|RMDN3|ENSG00000137824.16|regulator of microtubule dynamics 3	ENST00000338376.8|RMDN3|ENSG00000137824.16|regulator of microtubule dynamics 3	ENST00000560905.1|RMDN3|ENSG00000137824.16|regulator of microtubule dynamics 3
hg38_v1_chr12_-_30754813_30754888	0.118092	GLI3	ENST00000542550.5|CAPRIN2|ENSG00000110888.17|caprin family member 2	ENST00000540584.1|CAPRIN2|ENSG00000110888.17|caprin family member 2	ENST00000540436.5|CAPRIN2|ENSG00000110888.17|caprin family member 2
hg38_v1_chr11_-_627173_627187	0.117357	GLI3	ENST00000176195.4|SCT|ENSG00000070031.4|secretin
hg38_v1_chr11_+_46380932_46380953	0.116771	GLI3	ENST00000441869.5|MDK|ENSG00000110492.16|midkine
hg38_v1_chr17_-_752249_752295	0.115565	GLI3	ENST00000319004.6|GEMIN4|ENSG00000179409.11|gem nuclear organelle associated protein 4
hg38_v1_chr11_+_121102666_121102666	0.115528	GLI3	ENST00000264037.2|TECTA|ENSG00000109927.11|tectorin alpha
hg38_v1_chr3_+_46163465_46163604	0.115401	GLI3	ENST00000357422.2|CCR3|ENSG00000183625.16|C-C motif chemokine receptor 3
hg38_v1_chr19_-_3786408_3786415	0.115272	GLI3	ENST00000395040.6|MATK|ENSG00000007264.15|megakaryocyte-associated tyrosine kinase
hg38_v1_chr3_-_33440343_33440413	0.114695	GLI3	ENST00000283629.8|UBP1|ENSG00000153560.12|upstream binding protein 1
hg38_v1_chr11_+_77066948_77066979	0.114579	GLI3	ENST00000527066.5|CAPN5|ENSG00000149260.18|calpain 5	ENST00000648180.1|CAPN5|ENSG00000149260.18|calpain 5	ENST00000529629.5|CAPN5|ENSG00000149260.18|calpain 5
hg38_v1_chr11_-_61357239_61357279	0.113529	GLI3	ENST00000536915.5|CYB561A3|ENSG00000162144.10|cytochrome b561 family member A3
hg38_v1_chr11_+_64285472_64285515	0.113399	GLI3	ENST00000535675.5|GPR137|ENSG00000173264.15|G protein-coupled receptor 137	ENST00000543383.5|GPR137|ENSG00000173264.15|G protein-coupled receptor 137
hg38_v1_chr17_-_81961837_81961844	0.113396	GLI3	ENST00000425009.1|NOTUM|ENSG00000185269.12|notum, palmitoleoyl-protein carboxylesterase
hg38_v1_chr5_-_150137403_150137437	0.1124	GLI3	ENST00000517957.1|PDGFRB|ENSG00000113721.14|platelet derived growth factor receptor beta
hg38_v1_chr6_+_49550646_49550713	0.112303	GLI3	ENST00000529246.3|C6orf141|ENSG00000197261.11|chromosome 6 open reading frame 141
hg38_v1_chr7_+_64313943_64314030	0.11216	GLI3	ENST00000423484.3|ZNF736|ENSG00000234444.10|zinc finger protein 736
hg38_v1_chr17_+_15945101_15945139	0.112087	GLI3	ENST00000304222.3|ADORA2B|ENSG00000170425.4|adenosine A2b receptor
hg38_v1_chr20_-_50636887_50636890	0.111484	GLI3	ENST00000045083.6|RIPOR3|ENSG00000042062.13|RIPOR family member 3
hg38_v1_chr6_+_11537738_11537797	0.111355	GLI3	ENST00000379426.2|TMEM170B|ENSG00000205269.6|transmembrane protein 170B
hg38_v1_chr11_+_46332905_46332937	0.111337	GLI3	ENST00000343674.10|DGKZ|ENSG00000149091.15|diacylglycerol kinase zeta
hg38_v1_chr7_+_90211686_90211780	0.11077	GLI3	ENST00000287908.7|STEAP2|ENSG00000157214.14|STEAP2 metalloreductase	ENST00000394621.7|STEAP2|ENSG00000157214.14|STEAP2 metalloreductase	ENST00000394626.5|STEAP2|ENSG00000157214.14|STEAP2 metalloreductase
hg38_v1_chr11_-_119057024_119057055	0.110466	GLI3	ENST00000526656.5|HYOU1|ENSG00000149428.19|hypoxia up-regulated 1
hg38_v1_chr19_-_17460893_17460932	0.10998	GLI3	ENST00000301944.3|NXNL1|ENSG00000171773.3|nucleoredoxin like 1
hg38_v1_chr7_-_47539591_47539632	0.10977	GLI3	ENST00000442536.6|TNS3|ENSG00000136205.17|tensin 3	ENST00000458317.6|TNS3|ENSG00000136205.17|tensin 3
hg38_v1_chr4_-_48906720_48906783	0.109711	GLI3	ENST00000381464.6|OCIAD2|ENSG00000145247.12|OCIA domain containing 2	ENST00000508632.6|OCIAD2|ENSG00000145247.12|OCIA domain containing 2
hg38_v1_chr16_+_2009870_2009927	0.109405	GLI3	ENST00000567649.1|NPW|ENSG00000183971.10|neuropeptide W
hg38_v1_chr4_+_109433772_109433893	0.109149	GLI3	ENST00000504968.6|SEC24B|ENSG00000138802.11|SEC24 homolog B, COPII coat complex component	ENST00000399100.6|SEC24B|ENSG00000138802.11|SEC24 homolog B, COPII coat complex component	ENST00000265175.5|SEC24B|ENSG00000138802.11|SEC24 homolog B, COPII coat complex component
hg38_v1_chr15_+_28378664_28378664	0.109033	GLI3	ENST00000532622.7|GOLGA8F|ENSG00000153684.15|golgin A8 family member F	ENST00000526619.6|GOLGA8F|ENSG00000153684.15|golgin A8 family member F
hg38_v1_chr19_+_18588789_18588813	0.108685	GLI3	ENST00000450195.6|REX1BD|ENSG00000006015.18|required for excision 1-B domain containing	ENST00000358607.11|REX1BD|ENSG00000006015.18|required for excision 1-B domain containing
hg38_v1_chr12_-_6689450_6689517	0.108466	GLI3	ENST00000355772.8|ZNF384|ENSG00000126746.18|zinc finger protein 384	ENST00000417772.7|ZNF384|ENSG00000126746.18|zinc finger protein 384	ENST00000319770.7|ZNF384|ENSG00000126746.18|zinc finger protein 384	ENST00000396801.7|ZNF384|ENSG00000126746.18|zinc finger protein 384
hg38_v1_chr14_+_70907450_70907476	0.108406	GLI3	ENST00000304743.7|PCNX1|ENSG00000100731.16|pecanex 1
hg38_v1_chr19_+_4969105_4969132	0.108108	GLI3	ENST00000611640.4|KDM4B|ENSG00000127663.15|lysine demethylase 4B	ENST00000159111.9|KDM4B|ENSG00000127663.15|lysine demethylase 4B	ENST00000588337.5|KDM4B|ENSG00000127663.15|lysine demethylase 4B	ENST00000381759.8|KDM4B|ENSG00000127663.15|lysine demethylase 4B
hg38_v1_chr11_-_61891381_61891460	0.10789	GLI3	ENST00000525588.5|FADS3|ENSG00000221968.9|fatty acid desaturase 3
hg38_v1_chr3_-_170181719_170181756	0.107724	GLI3	ENST00000484931.5|PHC3|ENSG00000173889.16|polyhomeotic homolog 3	ENST00000495893.7|PHC3|ENSG00000173889.16|polyhomeotic homolog 3	ENST00000494943.5|PHC3|ENSG00000173889.16|polyhomeotic homolog 3	ENST00000497658.5|PHC3|ENSG00000173889.16|polyhomeotic homolog 3	ENST00000475729.5|PHC3|ENSG00000173889.16|polyhomeotic homolog 3	ENST00000481639.1|PHC3|ENSG00000173889.16|polyhomeotic homolog 3	ENST00000467570.5|PHC3|ENSG00000173889.16|polyhomeotic homolog 3	ENST00000466189.5|PHC3|ENSG00000173889.16|polyhomeotic homolog 3
hg38_v1_chr21_-_46318199_46318219	0.10772	GLI3	ENST00000417060.5|C21orf58|ENSG00000160298.18|chromosome 21 open reading frame 58
hg38_v1_chr16_+_67846917_67846950	0.10711	GLI3	ENST00000219169.9|NUTF2|ENSG00000102898.12|nuclear transport factor 2	ENST00000567105.5|NUTF2|ENSG00000102898.12|nuclear transport factor 2
hg38_v1_chr19_-_54115271_54115308	0.106558	GLI3	ENST00000391757.1|TFPT|ENSG00000105619.14|TCF3 fusion partner
hg38_v1_chr10_+_132332136_132332218	0.10565	GLI3	ENST00000344079.9|LRRC27|ENSG00000148814.18|leucine rich repeat containing 27	ENST00000625755.2|LRRC27|ENSG00000148814.18|leucine rich repeat containing 27	ENST00000368614.8|LRRC27|ENSG00000148814.18|leucine rich repeat containing 27
hg38_v1_chr3_-_42581936_42582028	0.105495	GLI3	ENST00000423701.6|SEC22C|ENSG00000093183.14|SEC22 homolog C, vesicle trafficking protein	ENST00000420163.1|SEC22C|ENSG00000093183.14|SEC22 homolog C, vesicle trafficking protein	ENST00000416880.5|SEC22C|ENSG00000093183.14|SEC22 homolog C, vesicle trafficking protein	ENST00000264454.8|SEC22C|ENSG00000093183.14|SEC22 homolog C, vesicle trafficking protein	ENST00000273156.11|SEC22C|ENSG00000093183.14|SEC22 homolog C, vesicle trafficking protein
hg38_v1_chr12_+_131949893_131950010	0.104334	GLI3	ENST00000389561.7|EP400|ENSG00000183495.14|E1A binding protein p400	ENST00000332482.8|EP400|ENSG00000183495.14|E1A binding protein p400	ENST00000333577.8|EP400|ENSG00000183495.14|E1A binding protein p400
hg38_v1_chr18_+_3411598_3411608	0.104211	GLI3	ENST00000552383.5|TGIF1|ENSG00000177426.22|TGFB induced factor homeobox 1
hg38_v1_chr1_+_15153698_15153780	0.103656	GLI3	ENST00000400796.7|TMEM51|ENSG00000171729.14|transmembrane protein 51	ENST00000376008.3|TMEM51|ENSG00000171729.14|transmembrane protein 51	ENST00000434578.6|TMEM51|ENSG00000171729.14|transmembrane protein 51
hg38_v1_chr7_-_121396284_121396375	0.103613	GLI3	ENST00000359943.8|FAM3C|ENSG00000196937.11|FAM3 metabolism regulating signaling molecule C	ENST00000426156.1|FAM3C|ENSG00000196937.11|FAM3 metabolism regulating signaling molecule C	ENST00000412653.5|FAM3C|ENSG00000196937.11|FAM3 metabolism regulating signaling molecule C
hg38_v1_chr7_-_152436535_152436644	0.103224	GLI3	ENST00000684278.1|KMT2C|ENSG00000055609.21|lysine methyltransferase 2C	ENST00000682301.1|KMT2C|ENSG00000055609.21|lysine methyltransferase 2C
hg38_v1_chr11_+_18455822_18455868	0.102836	GLI3	ENST00000615355.4|LDHAL6A|ENSG00000166800.10|lactate dehydrogenase A like 6A	ENST00000396213.7|LDHAL6A|ENSG00000166800.10|lactate dehydrogenase A like 6A	ENST00000280706.3|LDHAL6A|ENSG00000166800.10|lactate dehydrogenase A like 6A
hg38_v1_chr3_-_48635426_48635493	0.102534	GLI3	ENST00000455886.6|SLC26A6|ENSG00000225697.13|solute carrier family 26 member 6	ENST00000431739.5|SLC26A6|ENSG00000225697.13|solute carrier family 26 member 6	ENST00000426599.1|SLC26A6|ENSG00000225697.13|solute carrier family 26 member 6	ENST00000383733.7|SLC26A6|ENSG00000225697.13|solute carrier family 26 member 6	ENST00000395550.7|SLC26A6|ENSG00000225697.13|solute carrier family 26 member 6	ENST00000420764.6|SLC26A6|ENSG00000225697.13|solute carrier family 26 member 6	ENST00000337000.12|SLC26A6|ENSG00000225697.13|solute carrier family 26 member 6
hg38_v1_chr22_+_30607072_30607100	0.102394	GLI3	ENST00000450638.5|TCN2|ENSG00000185339.9|transcobalamin 2
hg38_v1_chrX_+_44873169_44873204	0.102361	GLI3	ENST00000675577.1|KDM6A|ENSG00000147050.17|lysine demethylase 6A	ENST00000674867.1|KDM6A|ENSG00000147050.17|lysine demethylase 6A	ENST00000674586.1|KDM6A|ENSG00000147050.17|lysine demethylase 6A	ENST00000382899.9|KDM6A|ENSG00000147050.17|lysine demethylase 6A	ENST00000536777.6|KDM6A|ENSG00000147050.17|lysine demethylase 6A	ENST00000543216.6|KDM6A|ENSG00000147050.17|lysine demethylase 6A	ENST00000377967.9|KDM6A|ENSG00000147050.17|lysine demethylase 6A	ENST00000611820.5|KDM6A|ENSG00000147050.17|lysine demethylase 6A
hg38_v1_chr17_+_74748616_74748637	0.101828	GLI3	ENST00000262613.10|SLC9A3R1|ENSG00000109062.12|SLC9A3 regulator 1
hg38_v1_chr9_+_70043840_70043855	0.10151	GLI3	ENST00000377182.5|MAMDC2|ENSG00000165072.10|MAM domain containing 2
hg38_v1_chr17_-_28897602_28897691	0.101364	GLI3	ENST00000394906.6|FLOT2|ENSG00000132589.16|flotillin 2	ENST00000585169.5|FLOT2|ENSG00000132589.16|flotillin 2
hg38_v1_chr1_+_15836089_15836143	0.100168	GLI3	ENST00000673875.1|SPEN|ENSG00000065526.12|spen family transcriptional repressor
hg38_v1_chr9_-_125189721_125189939	0.0998005	GLI3	ENST00000456642.1|PPP6C|ENSG00000119414.12|protein phosphatase 6 catalytic subunit	ENST00000373547.9|PPP6C|ENSG00000119414.12|protein phosphatase 6 catalytic subunit	ENST00000415905.5|PPP6C|ENSG00000119414.12|protein phosphatase 6 catalytic subunit	ENST00000451402.5|PPP6C|ENSG00000119414.12|protein phosphatase 6 catalytic subunit
hg38_v1_chr19_-_23758837_23758870	0.0997667	GLI3	ENST00000531570.1|ZNF681|ENSG00000196172.9|zinc finger protein 681	ENST00000528059.1|ZNF681|ENSG00000196172.9|zinc finger protein 681
hg38_v1_chr15_+_75336018_75336041	0.099463	GLI3	ENST00000567195.5|COMMD4|ENSG00000140365.16|COMM domain containing 4
hg38_v1_chr1_-_153565535_153565554	0.0993736	GLI3	ENST00000368707.5|S100A2|ENSG00000196754.13|S100 calcium binding protein A2
hg38_v1_chr16_-_2210833_2210905	0.0992164	GLI3	ENST00000562360.5|BRICD5|ENSG00000182685.8|BRICHOS domain containing 5	ENST00000328540.8|BRICD5|ENSG00000182685.8|BRICHOS domain containing 5	ENST00000566018.1|BRICD5|ENSG00000182685.8|BRICHOS domain containing 5
hg38_v1_chr7_+_120273129_120273183	0.098796	GLI3	ENST00000331113.9|KCND2|ENSG00000184408.10|potassium voltage-gated channel subfamily D member 2
hg38_v1_chr17_-_81833242_81833302	0.0987225	GLI3	ENST00000576431.5|MCRIP1|ENSG00000225663.8|MAPK regulated corepressor interacting protein 1	ENST00000575061.2|MCRIP1|ENSG00000225663.8|MAPK regulated corepressor interacting protein 1	ENST00000572645.5|MCRIP1|ENSG00000225663.8|MAPK regulated corepressor interacting protein 1	ENST00000455127.7|MCRIP1|ENSG00000225663.8|MAPK regulated corepressor interacting protein 1	ENST00000538396.5|MCRIP1|ENSG00000225663.8|MAPK regulated corepressor interacting protein 1	ENST00000573478.5|MCRIP1|ENSG00000225663.8|MAPK regulated corepressor interacting protein 1
hg38_v1_chr17_+_38717424_38717547	0.0985502	GLI3	ENST00000615858.1|MLLT6|ENSG00000275023.5|MLLT6, PHD finger containing
hg38_v1_chr15_+_85380565_85380614	0.0976559	GLI3	ENST00000559362.5|AKAP13|ENSG00000170776.22|A-kinase anchoring protein 13	ENST00000394518.7|AKAP13|ENSG00000170776.22|A-kinase anchoring protein 13
hg38_v1_chr14_-_50830479_50830610	0.0971889	GLI3	ENST00000382043.8|NIN|ENSG00000100503.26|ninein
hg38_v1_chr15_+_75336078_75336105	0.0968221	GLI3	ENST00000567377.5|COMMD4|ENSG00000140365.16|COMM domain containing 4	ENST00000562789.5|COMMD4|ENSG00000140365.16|COMM domain containing 4	ENST00000568301.1|COMMD4|ENSG00000140365.16|COMM domain containing 4
hg38_v1_chr19_+_17337539_17337602	0.0966484	GLI3	ENST00000324894.13|GTPBP3|ENSG00000130299.17|GTP binding protein 3, mitochondrial	ENST00000358792.11|GTPBP3|ENSG00000130299.17|GTP binding protein 3, mitochondrial	ENST00000600625.5|GTPBP3|ENSG00000130299.17|GTP binding protein 3, mitochondrial
hg38_v1_chr22_+_18906238_18906292	0.0965011	GLI3	ENST00000638240.1|ENSG00000283809.1|ENSG00000283809.1|novel protein
hg38_v1_chr8_+_132919403_132919440	0.0964886	GLI3	ENST00000519178.5|TG|ENSG00000042832.12|thyroglobulin
hg38_v1_chr16_+_50548387_50548405	0.0960749	GLI3	ENST00000268459.6|NKD1|ENSG00000140807.7|NKD inhibitor of WNT signaling pathway 1
hg38_v1_chr21_-_44551505_44551505	0.0953804	GLI3	ENST00000391621.1|KRTAP10-2|ENSG00000205445.3|keratin associated protein 10-2
hg38_v1_chr1_-_243255320_243255346	0.0952707	GLI3	ENST00000366544.5|CEP170|ENSG00000143702.16|centrosomal protein 170	ENST00000366543.5|CEP170|ENSG00000143702.16|centrosomal protein 170
hg38_v1_chr19_+_19538248_19538301	0.0946439	GLI3	ENST00000586018.5|CILP2|ENSG00000160161.9|cartilage intermediate layer protein 2	ENST00000291495.5|CILP2|ENSG00000160161.9|cartilage intermediate layer protein 2
hg38_v1_chr21_-_32612339_32612416	0.0945889	GLI3	ENST00000440966.5|CFAP298|ENSG00000159079.19|cilia and flagella associated protein 298	ENST00000290155.8|CFAP298|ENSG00000159079.19|cilia and flagella associated protein 298
hg38_v1_chrX_+_111681118_111681239	0.0940098	GLI3	ENST00000371979.7|ALG13|ENSG00000101901.12|ALG13 UDP-N-acetylglucosaminyltransferase subunit	ENST00000610588.4|ALG13|ENSG00000101901.12|ALG13 UDP-N-acetylglucosaminyltransferase subunit	ENST00000251943.8|ALG13|ENSG00000101901.12|ALG13 UDP-N-acetylglucosaminyltransferase subunit	ENST00000621367.4|ALG13|ENSG00000101901.12|ALG13 UDP-N-acetylglucosaminyltransferase subunit	ENST00000394780.8|ALG13|ENSG00000101901.12|ALG13 UDP-N-acetylglucosaminyltransferase subunit	ENST00000473389.5|ALG13|ENSG00000101901.12|ALG13 UDP-N-acetylglucosaminyltransferase subunit	ENST00000622986.3|ALG13|ENSG00000101901.12|ALG13 UDP-N-acetylglucosaminyltransferase subunit	ENST00000623255.1|ALG13|ENSG00000101901.12|ALG13 UDP-N-acetylglucosaminyltransferase subunit
hg38_v1_chr7_+_101815904_101815963	0.0936348	GLI3	ENST00000437600.9|CUX1|ENSG00000257923.12|cut like homeobox 1	ENST00000645010.1|CUX1|ENSG00000257923.12|cut like homeobox 1	ENST00000646649.1|CUX1|ENSG00000257923.12|cut like homeobox 1
hg38_v1_chr14_-_20436161_20436169	0.0929831	GLI3	ENST00000636854.3|KLHL33|ENSG00000185271.9|kelch like family member 33
hg38_v1_chr15_+_43185382_43185458	0.0929229	GLI3	ENST00000300213.9|CCNDBP1|ENSG00000166946.14|cyclin D1 binding protein 1
hg38_v1_chr2_+_177392734_177392795	0.0928302	GLI3	ENST00000680770.1|AGPS|ENSG00000018510.18|alkylglycerone phosphate synthase	ENST00000637633.2|AGPS|ENSG00000018510.18|alkylglycerone phosphate synthase	ENST00000679459.1|AGPS|ENSG00000018510.18|alkylglycerone phosphate synthase	ENST00000409888.1|AGPS|ENSG00000018510.18|alkylglycerone phosphate synthase	ENST00000264167.11|AGPS|ENSG00000018510.18|alkylglycerone phosphate synthase	ENST00000642466.2|AGPS|ENSG00000018510.18|alkylglycerone phosphate synthase
hg38_v1_chr10_+_45000898_45000961	0.092829	GLI3	ENST00000298299.4|ZNF22|ENSG00000165512.5|zinc finger protein 22
hg38_v1_chr22_-_42640601_42640601	0.0923772	GLI3	ENST00000505920.1|ATP5MGL|ENSG00000249222.1|ATP synthase membrane subunit g like
hg38_v1_chr3_+_11272386_11272412	0.092217	GLI3	ENST00000444619.5|ATG7|ENSG00000197548.12|autophagy related 7
hg38_v1_chr3_+_184363427_184363434	0.09221	GLI3	ENST00000429568.1|POLR2H|ENSG00000163882.9|RNA polymerase II, I and III subunit H
hg38_v1_chr18_+_79863668_79863668	0.0916419	GLI3	ENST00000316249.3|KCNG2|ENSG00000178342.4|potassium voltage-gated channel modifier subfamily G member 2
hg38_v1_chr17_-_75271205_75271216	0.0915734	GLI3	ENST00000649805.1|MIF4GD|ENSG00000125457.15|MIF4G domain containing
hg38_v1_chr1_-_39883434_39883512	0.0910962	GLI3	ENST00000541099.5|TRIT1|ENSG00000043514.17|tRNA isopentenyltransferase 1	ENST00000441669.6|TRIT1|ENSG00000043514.17|tRNA isopentenyltransferase 1	ENST00000316891.10|TRIT1|ENSG00000043514.17|tRNA isopentenyltransferase 1	ENST00000537440.5|TRIT1|ENSG00000043514.17|tRNA isopentenyltransferase 1	ENST00000372818.5|TRIT1|ENSG00000043514.17|tRNA isopentenyltransferase 1
hg38_v1_chr17_+_48107549_48107590	0.0908464	GLI3	ENST00000580219.5|SNX11|ENSG00000002919.15|sorting nexin 11	ENST00000452859.6|SNX11|ENSG00000002919.15|sorting nexin 11	ENST00000393405.6|SNX11|ENSG00000002919.15|sorting nexin 11
hg38_v1_chr14_+_104085691_104085719	0.089471	GLI3	ENST00000546892.6|ASPG|ENSG00000166183.16|asparaginase	ENST00000551177.6|ASPG|ENSG00000166183.16|asparaginase
hg38_v1_chr3_+_111859180_111859275	0.0894045	GLI3	ENST00000412622.5|PHLDB2|ENSG00000144824.21|pleckstrin homology like domain family B member 2	ENST00000431670.7|PHLDB2|ENSG00000144824.21|pleckstrin homology like domain family B member 2
hg38_v1_chr17_+_75754618_75754712	0.0890827	GLI3	ENST00000584939.1|ITGB4|ENSG00000132470.14|integrin subunit beta 4
hg38_v1_chr1_+_236523417_236523439	0.0889556	GLI3	ENST00000341872.10|LGALS8|ENSG00000116977.19|galectin 8	ENST00000416919.6|LGALS8|ENSG00000116977.19|galectin 8	ENST00000450372.6|LGALS8|ENSG00000116977.19|galectin 8
hg38_v1_chr1_+_23791203_23791228	0.0886708	GLI3	ENST00000374503.7|LYPLA2|ENSG00000011009.11|lysophospholipase 2	ENST00000374502.7|LYPLA2|ENSG00000011009.11|lysophospholipase 2
hg38_v1_chr1_-_16978276_16978326	0.0885431	GLI3	ENST00000375534.7|MFAP2|ENSG00000117122.14|microfibril associated protein 2
hg38_v1_chr3_-_53891836_53891962	0.0883733	GLI3	ENST00000495461.6|SELENOK|ENSG00000113811.11|selenoprotein K	ENST00000541726.5|SELENOK|ENSG00000113811.11|selenoprotein K
hg38_v1_chr14_-_105864247_105864269	0.0883523	GLI3	ENST00000461719.1|IGHJ4|ENSG00000240041.1|immunoglobulin heavy joining 4
hg38_v1_chr8_+_143684499_143684518	0.0882523	GLI3	ENST00000526315.5|ZNF707|ENSG00000181135.16|zinc finger protein 707	ENST00000532205.5|ZNF707|ENSG00000181135.16|zinc finger protein 707
hg38_v1_chr1_+_40040219_40040323	0.0882112	GLI3	ENST00000372797.7|CAP1|ENSG00000131236.18|cyclase associated actin cytoskeleton regulatory protein 1	ENST00000372802.5|CAP1|ENSG00000131236.18|cyclase associated actin cytoskeleton regulatory protein 1	ENST00000449311.5|CAP1|ENSG00000131236.18|cyclase associated actin cytoskeleton regulatory protein 1
hg38_v1_chr2_+_240625237_240625252	0.0880297	GLI3	ENST00000407714.1|GPR35|ENSG00000178623.12|G protein-coupled receptor 35
hg38_v1_chr11_+_66052331_66052400	0.0879702	GLI3	ENST00000528302.5|SF3B2|ENSG00000087365.16|splicing factor 3b subunit 2	ENST00000322535.11|SF3B2|ENSG00000087365.16|splicing factor 3b subunit 2	ENST00000524627.5|SF3B2|ENSG00000087365.16|splicing factor 3b subunit 2	ENST00000533595.5|SF3B2|ENSG00000087365.16|splicing factor 3b subunit 2	ENST00000530322.5|SF3B2|ENSG00000087365.16|splicing factor 3b subunit 2
hg38_v1_chr6_-_3751703_3751720	0.0878374	GLI3	ENST00000380283.5|PXDC1|ENSG00000168994.14|PX domain containing 1
hg38_v1_chr11_+_46380746_46380756	0.0872497	GLI3	ENST00000405308.6|MDK|ENSG00000110492.16|midkine
hg38_v1_chr3_-_58666765_58666780	0.0870617	GLI3	ENST00000358781.7|FAM3D|ENSG00000198643.7|FAM3 metabolism regulating signaling molecule D
hg38_v1_chr14_+_104707253_104707312	0.0870598	GLI3	ENST00000674602.1|INF2|ENSG00000203485.14|inverted formin 2
hg38_v1_chr2_-_175005161_175005221	0.0865508	GLI3	ENST00000652434.1|CHN1|ENSG00000128656.15|chimerin 1	ENST00000652208.1|CHN1|ENSG00000128656.15|chimerin 1
hg38_v1_chr3_+_4493340_4493356	0.086227	GLI3	ENST00000357086.10|ITPR1|ENSG00000150995.21|inositol 1,4,5-trisphosphate receptor type 1	ENST00000354582.12|ITPR1|ENSG00000150995.21|inositol 1,4,5-trisphosphate receptor type 1	ENST00000649015.2|ITPR1|ENSG00000150995.21|inositol 1,4,5-trisphosphate receptor type 1	ENST00000467056.6|ITPR1|ENSG00000150995.21|inositol 1,4,5-trisphosphate receptor type 1
hg38_v1_chr19_+_41350911_41350966	0.086188	GLI3	ENST00000539627.5|TMEM91|ENSG00000142046.15|transmembrane protein 91
hg38_v1_chr4_-_158671843_158671914	0.0850355	GLI3	ENST00000379205.5|C4orf46|ENSG00000205208.5|chromosome 4 open reading frame 46	ENST00000508457.1|C4orf46|ENSG00000205208.5|chromosome 4 open reading frame 46
hg38_v1_chr11_-_116791871_116791904	0.0839969	GLI3	ENST00000673688.1|APOA5|ENSG00000110243.12|apolipoprotein A5	ENST00000227665.9|APOA5|ENSG00000110243.12|apolipoprotein A5
hg38_v1_chr6_-_149890900_149891034	0.0837454	GLI3	ENST00000529948.1|RAET1E|ENSG00000164520.11|retinoic acid early transcript 1E	ENST00000357183.8|RAET1E|ENSG00000164520.11|retinoic acid early transcript 1E	ENST00000367363.3|RAET1E|ENSG00000164520.11|retinoic acid early transcript 1E
hg38_v1_chr11_-_119346695_119346710	0.0834424	GLI3	ENST00000619721.6|MFRP|ENSG00000235718.9|membrane frizzled-related protein
hg38_v1_chr17_-_1516647_1516673	0.0831298	GLI3	ENST00000498390.5|INPP5K|ENSG00000132376.20|inositol polyphosphate-5-phosphatase K
hg38_v1_chr11_-_36289408_36289449	0.0830962	GLI3	ENST00000263401.10|COMMD9|ENSG00000110442.12|COMM domain containing 9	ENST00000532705.1|COMMD9|ENSG00000110442.12|COMM domain containing 9	ENST00000452374.6|COMMD9|ENSG00000110442.12|COMM domain containing 9
hg38_v1_chr6_+_57090069_57090084	0.082872	GLI3	ENST00000370708.8|ZNF451|ENSG00000112200.17|zinc finger protein 451	ENST00000370702.5|ZNF451|ENSG00000112200.17|zinc finger protein 451
hg38_v1_chr19_-_35501878_35501913	0.0826026	GLI3	ENST00000593342.5|DMKN|ENSG00000161249.21|dermokine	ENST00000601650.1|DMKN|ENSG00000161249.21|dermokine	ENST00000408915.6|DMKN|ENSG00000161249.21|dermokine
hg38_v1_chr3_-_43621897_43622020	0.0824903	GLI3	ENST00000444344.5|ANO10|ENSG00000160746.13|anoctamin 10	ENST00000456438.5|ANO10|ENSG00000160746.13|anoctamin 10	ENST00000350459.8|ANO10|ENSG00000160746.13|anoctamin 10	ENST00000396091.7|ANO10|ENSG00000160746.13|anoctamin 10	ENST00000451430.6|ANO10|ENSG00000160746.13|anoctamin 10	ENST00000428472.5|ANO10|ENSG00000160746.13|anoctamin 10	ENST00000292246.8|ANO10|ENSG00000160746.13|anoctamin 10	ENST00000414522.6|ANO10|ENSG00000160746.13|anoctamin 10
hg38_v1_chr2_+_264869_264906	0.082393	GLI3	ENST00000272067.10|ACP1|ENSG00000143727.16|acid phosphatase 1	ENST00000407983.7|ACP1|ENSG00000143727.16|acid phosphatase 1
hg38_v1_chr20_-_5316948_5316959	0.0819445	GLI3	ENST00000678254.1|PROKR2|ENSG00000101292.8|prokineticin receptor 2
hg38_v1_chr8_-_23457618_23457670	0.0819369	GLI3	ENST00000358689.9|ENTPD4|ENSG00000197217.13|ectonucleoside triphosphate diphosphohydrolase 4	ENST00000518718.1|ENTPD4|ENSG00000197217.13|ectonucleoside triphosphate diphosphohydrolase 4
hg38_v1_chr5_+_6633421_6633465	0.0808424	GLI3	ENST00000274192.7|SRD5A1|ENSG00000145545.12|steroid 5 alpha-reductase 1
hg38_v1_chr7_-_151410024_151410043	0.0806801	GLI3	ENST00000628331.1|WDR86|ENSG00000187260.16|WD repeat domain 86	ENST00000334493.11|WDR86|ENSG00000187260.16|WD repeat domain 86
hg38_v1_chr1_+_13171848_13171848	0.0806565	GLI3	ENST00000415919.3|PRAMEF9|ENSG00000204505.5|PRAME family member 9
hg38_v1_chr5_-_151080978_151081084	0.0805862	GLI3	ENST00000520931.5|TNIP1|ENSG00000145901.16|TNFAIP3 interacting protein 1	ENST00000521591.6|TNIP1|ENSG00000145901.16|TNFAIP3 interacting protein 1	ENST00000520695.5|TNIP1|ENSG00000145901.16|TNFAIP3 interacting protein 1	ENST00000610535.5|TNIP1|ENSG00000145901.16|TNFAIP3 interacting protein 1	ENST00000518977.5|TNIP1|ENSG00000145901.16|TNFAIP3 interacting protein 1	ENST00000389378.6|TNIP1|ENSG00000145901.16|TNFAIP3 interacting protein 1	ENST00000610874.4|TNIP1|ENSG00000145901.16|TNFAIP3 interacting protein 1
hg38_v1_chr19_+_35143237_35143301	0.0805504	GLI3	ENST00000586063.5|FXYD7|ENSG00000221946.8|FXYD domain containing ion transport regulator 7	ENST00000270310.7|FXYD7|ENSG00000221946.8|FXYD domain containing ion transport regulator 7	ENST00000588265.1|FXYD7|ENSG00000221946.8|FXYD domain containing ion transport regulator 7
hg38_v1_chr12_+_65169546_65169593	0.0800767	GLI3	ENST00000308330.3|LEMD3|ENSG00000174106.3|LEM domain containing 3
hg38_v1_chr22_+_24594781_24594814	0.0800601	GLI3	ENST00000456869.5|GGT1|ENSG00000100031.19|gamma-glutamyltransferase 1	ENST00000411974.5|GGT1|ENSG00000100031.19|gamma-glutamyltransferase 1
hg38_v1_chr12_-_26833143_26833214	0.0799846	GLI3	ENST00000381340.8|ITPR2|ENSG00000123104.12|inositol 1,4,5-trisphosphate receptor type 2
hg38_v1_chr2_+_96326204_96326223	0.0798743	GLI3	ENST00000420728.1|ITPRIPL1|ENSG00000198885.10|ITPRIP like 1	ENST00000361124.5|ITPRIPL1|ENSG00000198885.10|ITPRIP like 1
hg38_v1_chr13_-_113364141_113364164	0.0798719	GLI3	ENST00000620217.4|GRTP1|ENSG00000139835.14|growth hormone regulated TBC protein 1	ENST00000375430.8|GRTP1|ENSG00000139835.14|growth hormone regulated TBC protein 1
hg38_v1_chr4_+_70195719_70195737	0.0792962	GLI3	ENST00000683306.1|ODAM|ENSG00000109205.17|odontogenic, ameloblast associated
hg38_v1_chr22_-_30529163_30529163	0.0791947	GLI3	ENST00000437871.1|SEC14L6|ENSG00000214491.8|SEC14 like lipid binding 6
hg38_v1_chr2_+_216633411_216633431	0.078998	GLI3	ENST00000233809.9|IGFBP2|ENSG00000115457.10|insulin like growth factor binding protein 2
hg38_v1_chr1_-_110064916_110064927	0.0789013	GLI3	ENST00000649954.1|ALX3|ENSG00000156150.9|ALX homeobox 3
hg38_v1_chr1_+_70411180_70411238	0.0786574	GLI3	ENST00000411986.6|CTH|ENSG00000116761.12|cystathionine gamma-lyase
hg38_v1_chr12_-_8066331_8066383	0.078637	GLI3	ENST00000546241.1|C3AR1|ENSG00000171860.5|complement C3a receptor 1	ENST00000307637.5|C3AR1|ENSG00000171860.5|complement C3a receptor 1
hg38_v1_chr19_+_39156631_39156709	0.0783243	GLI3	ENST00000599657.5|PAK4|ENSG00000130669.17|p21 (RAC1) activated kinase 4
hg38_v1_chr16_-_23713197_23713243	0.0779635	GLI3	ENST00000256797.9|ERN2|ENSG00000134398.15|endoplasmic reticulum to nucleus signaling 2	ENST00000457008.6|ERN2|ENSG00000134398.15|endoplasmic reticulum to nucleus signaling 2
hg38_v1_chr1_-_5992407_5992482	0.0774021	GLI3	ENST00000378156.9|NPHP4|ENSG00000131697.18|nephrocystin 4	ENST00000622020.4|NPHP4|ENSG00000131697.18|nephrocystin 4
hg38_v1_chr12_+_104215772_104215785	0.0771157	GLI3	ENST00000429002.6|TXNRD1|ENSG00000198431.16|thioredoxin reductase 1	ENST00000525566.6|TXNRD1|ENSG00000198431.16|thioredoxin reductase 1
hg38_v1_chr1_-_31065671_31065785	0.0763188	GLI3	ENST00000440538.6|PUM1|ENSG00000134644.16|pumilio RNA binding family member 1	ENST00000424085.6|PUM1|ENSG00000134644.16|pumilio RNA binding family member 1	ENST00000257075.9|PUM1|ENSG00000134644.16|pumilio RNA binding family member 1	ENST00000373747.7|PUM1|ENSG00000134644.16|pumilio RNA binding family member 1	ENST00000426105.7|PUM1|ENSG00000134644.16|pumilio RNA binding family member 1	ENST00000525843.5|PUM1|ENSG00000134644.16|pumilio RNA binding family member 1	ENST00000373742.6|PUM1|ENSG00000134644.16|pumilio RNA binding family member 1
hg38_v1_chr7_+_99828010_99828116	0.0755399	GLI3	ENST00000631161.2|CYP3A43|ENSG00000021461.17|cytochrome P450 family 3 subfamily A member 43	ENST00000354829.7|CYP3A43|ENSG00000021461.17|cytochrome P450 family 3 subfamily A member 43	ENST00000342499.8|CYP3A43|ENSG00000021461.17|cytochrome P450 family 3 subfamily A member 43	ENST00000417625.5|CYP3A43|ENSG00000021461.17|cytochrome P450 family 3 subfamily A member 43	ENST00000415413.5|CYP3A43|ENSG00000021461.17|cytochrome P450 family 3 subfamily A member 43	ENST00000444905.5|CYP3A43|ENSG00000021461.17|cytochrome P450 family 3 subfamily A member 43	ENST00000222382.5|CYP3A43|ENSG00000021461.17|cytochrome P450 family 3 subfamily A member 43	ENST00000312017.9|CYP3A43|ENSG00000021461.17|cytochrome P450 family 3 subfamily A member 43
hg38_v1_chr12_-_124518281_124518311	0.0755162	GLI3	ENST00000420698.5|NCOR2|ENSG00000196498.13|nuclear receptor corepressor 2
hg38_v1_chr11_+_35943981_35944108	0.074943	GLI3	ENST00000528989.5|LDLRAD3|ENSG00000179241.13|low density lipoprotein receptor class A domain containing 3	ENST00000524419.5|LDLRAD3|ENSG00000179241.13|low density lipoprotein receptor class A domain containing 3	ENST00000315571.6|LDLRAD3|ENSG00000179241.13|low density lipoprotein receptor class A domain containing 3
hg38_v1_chr22_-_49918404_49918473	0.07448	GLI3	ENST00000330817.11|ALG12|ENSG00000182858.14|ALG12 alpha-1,6-mannosyltransferase
hg38_v1_chr17_-_44947637_44947781	0.0738717	GLI3	ENST00000587309.5|KIF18B|ENSG00000186185.14|kinesin family member 18B	ENST00000593135.6|KIF18B|ENSG00000186185.14|kinesin family member 18B
hg38_v1_chr22_+_20551000_20551041	0.0738103	GLI3	ENST00000428629.5|MED15|ENSG00000099917.17|mediator complex subunit 15
hg38_v1_chr1_+_243256034_243256082	0.073769	GLI3	ENST00000366541.8|SDCCAG8|ENSG00000054282.16|SHH signaling and ciliogenesis regulator SDCCAG8
hg38_v1_chr17_-_10026265_10026310	0.0717536	GLI3	ENST00000437099.6|GAS7|ENSG00000007237.19|growth arrest specific 7	ENST00000396115.6|GAS7|ENSG00000007237.19|growth arrest specific 7
hg38_v1_chr7_+_44044663_44044733	0.0715657	GLI3	ENST00000456905.5|DBNL|ENSG00000136279.21|drebrin like	ENST00000440166.5|DBNL|ENSG00000136279.21|drebrin like	ENST00000452943.5|DBNL|ENSG00000136279.21|drebrin like	ENST00000448521.6|DBNL|ENSG00000136279.21|drebrin like	ENST00000468694.5|DBNL|ENSG00000136279.21|drebrin like	ENST00000494774.5|DBNL|ENSG00000136279.21|drebrin like
hg38_v1_chr19_+_2096873_2096931	0.071353	GLI3	ENST00000395307.6|IZUMO4|ENSG00000099840.14|IZUMO family member 4	ENST00000395301.8|IZUMO4|ENSG00000099840.14|IZUMO family member 4	ENST00000620263.4|IZUMO4|ENSG00000099840.14|IZUMO family member 4
hg38_v1_chrX_-_109733181_109733216	0.0702822	GLI3	ENST00000673016.1|ACSL4|ENSG00000068366.21|acyl-CoA synthetase long chain family member 4
hg38_v1_chr3_-_58666796_58666844	0.0699321	GLI3	ENST00000489857.5|FAM3D|ENSG00000198643.7|FAM3 metabolism regulating signaling molecule D
hg38_v1_chr17_+_34255274_34255293	0.0696378	GLI3	ENST00000580907.5|CCL2|ENSG00000108691.9|C-C motif chemokine ligand 2	ENST00000225831.4|CCL2|ENSG00000108691.9|C-C motif chemokine ligand 2
hg38_v1_chr15_+_75843438_75843466	0.0692533	GLI3	ENST00000267938.9|UBE2Q2|ENSG00000140367.12|ubiquitin conjugating enzyme E2 Q2
hg38_v1_chr4_-_688980_689040	0.0689368	GLI3	ENST00000507165.5|SLC49A3|ENSG00000169026.13|solute carrier family 49 member 3
hg38_v1_chr17_-_41047267_41047316	0.0685685	GLI3	ENST00000542137.1|KRTAP2-1|ENSG00000212725.3|keratin associated protein 2-1	ENST00000391419.3|KRTAP2-1|ENSG00000212725.3|keratin associated protein 2-1
hg38_v1_chr19_-_49017087_49017110	0.068538	GLI3	ENST00000649238.3|LHB|ENSG00000104826.15|luteinizing hormone subunit beta
hg38_v1_chr3_+_88059231_88059301	0.0682107	GLI3	ENST00000636215.2|ZNF654|ENSG00000175105.8|zinc finger protein 654
hg38_v1_chr19_-_2090132_2090176	0.067563	GLI3	ENST00000591326.5|MOB3A|ENSG00000172081.14|MOB kinase activator 3A
hg38_v1_chr9_+_129110948_129110964	0.0673191	GLI3	ENST00000358994.9|PTPA|ENSG00000119383.21|protein phosphatase 2 phosphatase activator	ENST00000455292.6|PTPA|ENSG00000119383.21|protein phosphatase 2 phosphatase activator
hg38_v1_chr15_+_75336053_75336074	0.0656395	GLI3	ENST00000564815.5|COMMD4|ENSG00000140365.16|COMM domain containing 4	ENST00000338995.10|COMMD4|ENSG00000140365.16|COMM domain containing 4	ENST00000267935.13|COMMD4|ENSG00000140365.16|COMM domain containing 4
hg38_v1_chr2_-_135876382_135876452	0.0656196	GLI3	ENST00000264156.3|MCM6|ENSG00000076003.5|minichromosome maintenance complex component 6
hg38_v1_chr15_-_78641225_78641270	0.0654592	GLI3	ENST00000412074.6|CHRNB4|ENSG00000117971.12|cholinergic receptor nicotinic beta 4 subunit
hg38_v1_chr6_+_27388965_27388998	0.0650955	GLI3	ENST00000461521.1|ZNF391|ENSG00000124613.9|zinc finger protein 391
hg38_v1_chr17_-_7627803_7627879	0.0648137	GLI3	ENST00000573566.1|SAT2|ENSG00000141504.12|spermidine/spermine N1-acetyltransferase family member 2	ENST00000269298.10|SAT2|ENSG00000141504.12|spermidine/spermine N1-acetyltransferase family member 2
hg38_v1_chr2_+_10721649_10721660	0.0642378	GLI3	ENST00000381661.3|ATP6V1C2|ENSG00000143882.12|ATPase H+ transporting V1 subunit C2
hg38_v1_chr5_+_179820876_179820885	0.064219	GLI3	ENST00000626660.1|SQSTM1|ENSG00000161011.20|sequestosome 1
hg38_v1_chr6_-_30717264_30717334	0.0638519	GLI3	ENST00000376406.8|MDC1|ENSG00000137337.15|mediator of DNA damage checkpoint 1
hg38_v1_chrX_-_109733292_109733403	0.0634045	GLI3	ENST00000682031.1|ACSL4|ENSG00000068366.21|acyl-CoA synthetase long chain family member 4	ENST00000502391.6|ACSL4|ENSG00000068366.21|acyl-CoA synthetase long chain family member 4	ENST00000508092.5|ACSL4|ENSG00000068366.21|acyl-CoA synthetase long chain family member 4	ENST00000348502.10|ACSL4|ENSG00000068366.21|acyl-CoA synthetase long chain family member 4
hg38_v1_chr2_+_158968608_158968695	0.0630369	GLI3	ENST00000263635.8|TANC1|ENSG00000115183.15|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1
hg38_v1_chr19_+_34172492_34172568	0.063025	GLI3	ENST00000544216.8|LSM14A|ENSG00000257103.9|LSM14A mRNA processing body assembly factor	ENST00000540746.6|LSM14A|ENSG00000257103.9|LSM14A mRNA processing body assembly factor	ENST00000433627.9|LSM14A|ENSG00000257103.9|LSM14A mRNA processing body assembly factor
hg38_v1_chr1_+_236523932_236524029	0.0629849	GLI3	ENST00000366584.9|LGALS8|ENSG00000116977.19|galectin 8	ENST00000323938.10|LGALS8|ENSG00000116977.19|galectin 8
hg38_v1_chr8_+_119416427_119416456	0.062735	GLI3	ENST00000259526.4|CCN3|ENSG00000136999.5|cellular communication network factor 3
hg38_v1_chr17_-_69327244_69327283	0.062627	GLI3	ENST00000588665.5|ABCA5|ENSG00000154265.16|ATP binding cassette subfamily A member 5
hg38_v1_chr7_-_102616692_102616756	0.062347	GLI3	ENST00000521076.5|RASA4|ENSG00000105808.18|RAS p21 protein activator 4	ENST00000462172.5|RASA4|ENSG00000105808.18|RAS p21 protein activator 4	ENST00000522801.5|RASA4|ENSG00000105808.18|RAS p21 protein activator 4	ENST00000262940.12|RASA4|ENSG00000105808.18|RAS p21 protein activator 4	ENST00000449970.6|RASA4|ENSG00000105808.18|RAS p21 protein activator 4
hg38_v1_chr3_-_71493500_71493570	0.0621152	GLI3	ENST00000648380.1|FOXP1|ENSG00000114861.23|forkhead box P1	ENST00000650295.1|FOXP1|ENSG00000114861.23|forkhead box P1
hg38_v1_chr12_-_52452139_52452154	0.0615355	GLI3	ENST00000252252.4|KRT6B|ENSG00000185479.6|keratin 6B
hg38_v1_chr17_+_79034185_79034309	0.0614636	GLI3	ENST00000581774.5|C1QTNF1|ENSG00000173918.15|C1q and TNF related 1
hg38_v1_chr2_-_106160584_106160649	0.0613666	GLI3	ENST00000444193.5|UXS1|ENSG00000115652.15|UDP-glucuronate decarboxylase 1	ENST00000416298.5|UXS1|ENSG00000115652.15|UDP-glucuronate decarboxylase 1
hg38_v1_chr14_-_94452766_94452807	0.0603541	GLI3	ENST00000334708.4|SERPINA11|ENSG00000186910.4|serpin family A member 11
hg38_v1_chr13_+_19958760_19958783	0.060317	GLI3	ENST00000382871.3|ZMYM2|ENSG00000121741.17|zinc finger MYM-type containing 2
hg38_v1_chr9_+_100427123_100427173	0.0603125	GLI3	ENST00000395067.7|MSANTD3|ENSG00000066697.15|Myb/SANT DNA binding domain containing 3
hg38_v1_chr16_+_70454577_70454727	0.0594438	GLI3	ENST00000572784.5|FCSK|ENSG00000157353.17|fucose kinase	ENST00000574784.5|FCSK|ENSG00000157353.17|fucose kinase	ENST00000571514.5|FCSK|ENSG00000157353.17|fucose kinase	ENST00000288078.11|FCSK|ENSG00000157353.17|fucose kinase	ENST00000378912.6|FCSK|ENSG00000157353.17|fucose kinase	ENST00000573352.5|FCSK|ENSG00000157353.17|fucose kinase	ENST00000576453.1|FCSK|ENSG00000157353.17|fucose kinase
hg38_v1_chr7_+_45888479_45888497	0.0594194	GLI3	ENST00000275525.8|IGFBP1|ENSG00000146678.10|insulin like growth factor binding protein 1	ENST00000468955.1|IGFBP1|ENSG00000146678.10|insulin like growth factor binding protein 1
hg38_v1_chr15_+_41621492_41621554	0.0594154	GLI3	ENST00000570161.6|MGA|ENSG00000174197.17|MAX dimerization protein MGA
hg38_v1_chr10_+_27155339_27155372	0.0592303	GLI3	ENST00000375940.9|MASTL|ENSG00000120539.15|microtubule associated serine/threonine kinase like	ENST00000342386.10|MASTL|ENSG00000120539.15|microtubule associated serine/threonine kinase like
hg38_v1_chr9_+_128456899_128456919	0.0591934	GLI3	ENST00000372791.7|ODF2|ENSG00000136811.16|outer dense fiber of sperm tails 2
hg38_v1_chr16_+_1678271_1678295	0.0589291	GLI3	ENST00000562684.5|JPT2|ENSG00000206053.13|Jupiter microtubule associated homolog 2	ENST00000561516.5|JPT2|ENSG00000206053.13|Jupiter microtubule associated homolog 2	ENST00000248098.8|JPT2|ENSG00000206053.13|Jupiter microtubule associated homolog 2	ENST00000382711.9|JPT2|ENSG00000206053.13|Jupiter microtubule associated homolog 2	ENST00000566742.5|JPT2|ENSG00000206053.13|Jupiter microtubule associated homolog 2
hg38_v1_chr16_+_68037913_68038070	0.0587195	GLI3	ENST00000562246.2|DUS2|ENSG00000167264.18|dihydrouridine synthase 2
hg38_v1_chr13_+_19958708_19958750	0.0585492	GLI3	ENST00000382874.6|ZMYM2|ENSG00000121741.17|zinc finger MYM-type containing 2	ENST00000610343.5|ZMYM2|ENSG00000121741.17|zinc finger MYM-type containing 2
hg38_v1_chr5_-_154850570_154850666	0.0583146	GLI3	ENST00000326080.10|FAXDC2|ENSG00000170271.11|fatty acid hydroxylase domain containing 2	ENST00000519501.5|FAXDC2|ENSG00000170271.11|fatty acid hydroxylase domain containing 2	ENST00000518651.5|FAXDC2|ENSG00000170271.11|fatty acid hydroxylase domain containing 2	ENST00000517938.5|FAXDC2|ENSG00000170271.11|fatty acid hydroxylase domain containing 2	ENST00000520461.1|FAXDC2|ENSG00000170271.11|fatty acid hydroxylase domain containing 2
hg38_v1_chr19_+_57487735_57487768	0.0576999	GLI3	ENST00000347466.10|ZNF419|ENSG00000105136.21|zinc finger protein 419	ENST00000523138.5|ZNF419|ENSG00000105136.21|zinc finger protein 419	ENST00000415379.6|ZNF419|ENSG00000105136.21|zinc finger protein 419	ENST00000221735.12|ZNF419|ENSG00000105136.21|zinc finger protein 419	ENST00000521754.5|ZNF419|ENSG00000105136.21|zinc finger protein 419
hg38_v1_chr11_+_63506339_63506363	0.0575211	GLI3	ENST00000340246.10|LGALS12|ENSG00000133317.16|galectin 12
hg38_v1_chr22_+_45318480_45318493	0.0575056	GLI3	ENST00000452238.5|FAM118A|ENSG00000100376.12|family with sequence similarity 118 member A
hg38_v1_chr10_+_119104075_119104119	0.0570083	GLI3	ENST00000472379.2|DENND10|ENSG00000119979.18|DENN domain containing 10	ENST00000361432.3|DENND10|ENSG00000119979.18|DENN domain containing 10	ENST00000648560.1|DENND10|ENSG00000119979.18|DENN domain containing 10
hg38_v1_chr12_-_92929236_92929336	0.0567872	GLI3	ENST00000322349.13|EEA1|ENSG00000102189.17|early endosome antigen 1
hg38_v1_chr3_+_15427551_15427634	0.0566277	GLI3	ENST00000396842.7|EAF1|ENSG00000144597.14|ELL associated factor 1
hg38_v1_chr17_-_7857854_7857882	0.0557538	GLI3	ENST00000333775.9|NAA38|ENSG00000183011.14|N-alpha-acetyltransferase 38, NatC auxiliary subunit
hg38_v1_chr15_+_42575592_42575613	0.0551933	GLI3	ENST00000290607.12|STARD9|ENSG00000159433.12|StAR related lipid transfer domain containing 9
hg38_v1_chr1_-_44843240_44843262	0.0549269	GLI3	ENST00000372192.4|PTCH2|ENSG00000117425.14|patched 2
hg38_v1_chr17_-_37989048_37989060	0.0548767	GLI3	ENST00000617678.2|TBC1D3L|ENSG00000274512.6|TBC1 domain family member 3L	ENST00000612727.5|TBC1D3L|ENSG00000274512.6|TBC1 domain family member 3L
hg38_v1_chr17_+_77319465_77319533	0.0548379	GLI3	ENST00000329047.13|SEPTIN9|ENSG00000184640.20|septin 9
hg38_v1_chr9_-_95509241_95509273	0.0548243	GLI3	ENST00000331920.11|PTCH1|ENSG00000185920.17|patched 1
hg38_v1_chr14_-_60165293_60165318	0.0545994	GLI3	ENST00000554101.5|DHRS7|ENSG00000100612.14|dehydrogenase/reductase 7	ENST00000557137.1|DHRS7|ENSG00000100612.14|dehydrogenase/reductase 7
hg38_v1_chr3_-_59049947_59050084	0.0542543	GLI3	ENST00000491845.5|CFAP20DC|ENSG00000163689.20|CFAP20 domain containing	ENST00000472469.5|CFAP20DC|ENSG00000163689.20|CFAP20 domain containing	ENST00000482387.6|CFAP20DC|ENSG00000163689.20|CFAP20 domain containing	ENST00000295966.11|CFAP20DC|ENSG00000163689.20|CFAP20 domain containing
hg38_v1_chr11_-_65872617_65872654	0.0542118	GLI3	ENST00000526624.5|EFEMP2|ENSG00000172638.13|EGF containing fibulin extracellular matrix protein 2
hg38_v1_chr1_+_70411241_70411383	0.0539402	GLI3	ENST00000370938.8|CTH|ENSG00000116761.12|cystathionine gamma-lyase	ENST00000346806.2|CTH|ENSG00000116761.12|cystathionine gamma-lyase
hg38_v1_chr3_+_181711915_181711934	0.0534573	GLI3	ENST00000325404.3|SOX2|ENSG00000181449.4|SRY-box transcription factor 2
hg38_v1_chr8_+_96645303_96645378	0.0534123	GLI3	ENST00000519900.1|CPQ|ENSG00000104324.16|carboxypeptidase Q	ENST00000517742.1|CPQ|ENSG00000104324.16|carboxypeptidase Q
hg38_v1_chr7_+_143263412_143263460	0.0531695	GLI3	ENST00000409500.7|GSTK1|ENSG00000197448.14|glutathione S-transferase kappa 1	ENST00000443571.6|GSTK1|ENSG00000197448.14|glutathione S-transferase kappa 1	ENST00000358406.10|GSTK1|ENSG00000197448.14|glutathione S-transferase kappa 1	ENST00000479303.1|GSTK1|ENSG00000197448.14|glutathione S-transferase kappa 1
hg38_v1_chr15_-_43800132_43800225	0.0529765	GLI3	ENST00000299969.10|SERINC4|ENSG00000184716.14|serine incorporator 4	ENST00000319327.7|SERINC4|ENSG00000184716.14|serine incorporator 4
hg38_v1_chr16_+_67199104_67199158	0.0526917	GLI3	ENST00000360833.6|ELMO3|ENSG00000102890.16|engulfment and cell motility 3	ENST00000652269.1|ELMO3|ENSG00000102890.16|engulfment and cell motility 3	ENST00000393997.8|ELMO3|ENSG00000102890.16|engulfment and cell motility 3
hg38_v1_chr19_-_4182527_4182576	0.0525327	GLI3	ENST00000601571.1|SIRT6|ENSG00000077463.15|sirtuin 6	ENST00000601488.5|SIRT6|ENSG00000077463.15|sirtuin 6	ENST00000305232.10|SIRT6|ENSG00000077463.15|sirtuin 6	ENST00000337491.7|SIRT6|ENSG00000077463.15|sirtuin 6
hg38_v1_chr17_-_38192555_38192555	0.0524641	GLI3	ENST00000620215.3|TBC1D3|ENSG00000274611.4|TBC1 domain family member 3
hg38_v1_chr19_+_58451607_58451653	0.0509433	GLI3	ENST00000545523.5|ZNF324B|ENSG00000249471.8|zinc finger protein 324B	ENST00000599194.5|ZNF324B|ENSG00000249471.8|zinc finger protein 324B	ENST00000336614.9|ZNF324B|ENSG00000249471.8|zinc finger protein 324B	ENST00000598244.5|ZNF324B|ENSG00000249471.8|zinc finger protein 324B	ENST00000599193.5|ZNF324B|ENSG00000249471.8|zinc finger protein 324B	ENST00000594214.1|ZNF324B|ENSG00000249471.8|zinc finger protein 324B
hg38_v1_chr16_-_981259_981326	0.0508856	GLI3	ENST00000563837.1|CEROX1|ENSG00000260807.7|cytoplasmic endogenous regulator of oxidative phosphorylation 1	ENST00000570014.5|LMF1|ENSG00000103227.19|lipase maturation factor 1	ENST00000563863.5|CEROX1|ENSG00000260807.7|cytoplasmic endogenous regulator of oxidative phosphorylation 1	ENST00000565069.5|CEROX1|ENSG00000260807.7|cytoplasmic endogenous regulator of oxidative phosphorylation 1
hg38_v1_chr5_+_74685225_74685239	0.0507724	GLI3	ENST00000261416.12|HEXB|ENSG00000049860.14|hexosaminidase subunit beta
hg38_v1_chr16_-_2268373_2268407	0.0507426	GLI3	ENST00000566458.5|RNPS1|ENSG00000205937.12|RNA binding protein with serine rich domain 1
hg38_v1_chr6_+_162727129_162727156	0.0502591	GLI3	ENST00000337019.7|PACRG|ENSG00000112530.11|parkin coregulated	ENST00000366889.6|PACRG|ENSG00000112530.11|parkin coregulated
hg38_v1_chr12_-_8949628_8949761	0.0500893	GLI3	ENST00000000412.8|M6PR|ENSG00000003056.8|mannose-6-phosphate receptor, cation dependent	ENST00000543845.1|M6PR|ENSG00000003056.8|mannose-6-phosphate receptor, cation dependent	ENST00000544245.1|M6PR|ENSG00000003056.8|mannose-6-phosphate receptor, cation dependent	ENST00000536844.5|M6PR|ENSG00000003056.8|mannose-6-phosphate receptor, cation dependent
hg38_v1_chr21_+_43867215_43867242	0.0500242	GLI3	ENST00000448287.5|AGPAT3|ENSG00000160216.21|1-acylglycerol-3-phosphate O-acyltransferase 3
hg38_v1_chr8_+_144148027_144148046	0.0495187	GLI3	ENST00000423230.6|MROH1|ENSG00000179832.18|maestro heat like repeat family member 1
hg38_v1_chr8_+_89901845_89901859	0.0494849	GLI3	ENST00000647849.1|OSGIN2|ENSG00000164823.11|oxidative stress induced growth inhibitor family member 2	ENST00000297438.6|OSGIN2|ENSG00000164823.11|oxidative stress induced growth inhibitor family member 2
hg38_v1_chr12_-_7751605_7751622	0.0492933	GLI3	ENST00000354629.9|CLEC4C|ENSG00000198178.11|C-type lectin domain family 4 member C
hg38_v1_chr12_+_120496075_120496096	0.0484178	GLI3	ENST00000548214.1|DYNLL1|ENSG00000088986.11|dynein light chain LC8-type 1	ENST00000392508.2|DYNLL1|ENSG00000088986.11|dynein light chain LC8-type 1
hg38_v1_chr13_+_49997019_49997093	0.0482895	GLI3	ENST00000420995.6|TRIM13|ENSG00000204977.10|tripartite motif containing 13	ENST00000356017.8|TRIM13|ENSG00000204977.10|tripartite motif containing 13	ENST00000378182.4|TRIM13|ENSG00000204977.10|tripartite motif containing 13	ENST00000457662.2|TRIM13|ENSG00000204977.10|tripartite motif containing 13
hg38_v1_chr7_-_102517755_102517777	0.0479398	GLI3	ENST00000306682.6|RASA4B|ENSG00000170667.15|RAS p21 protein activator 4B	ENST00000465829.6|RASA4B|ENSG00000170667.15|RAS p21 protein activator 4B	ENST00000541662.5|RASA4B|ENSG00000170667.15|RAS p21 protein activator 4B
hg38_v1_chr1_+_91949395_91949434	0.0475708	GLI3	ENST00000449584.5|BRDT|ENSG00000137948.19|bromodomain testis associated	ENST00000427104.5|BRDT|ENSG00000137948.19|bromodomain testis associated	ENST00000355011.7|BRDT|ENSG00000137948.19|bromodomain testis associated	ENST00000399546.7|BRDT|ENSG00000137948.19|bromodomain testis associated	ENST00000450792.5|BRDT|ENSG00000137948.19|bromodomain testis associated	ENST00000548992.5|BRDT|ENSG00000137948.19|bromodomain testis associated	ENST00000552654.1|BRDT|ENSG00000137948.19|bromodomain testis associated	ENST00000457265.1|BRDT|ENSG00000137948.19|bromodomain testis associated
hg38_v1_chr16_+_4556335_4556345	0.0475603	GLI3	ENST00000444310.5|C16orf96|ENSG00000205832.8|chromosome 16 open reading frame 96
hg38_v1_chr19_+_10871516_10871596	0.0474934	GLI3	ENST00000327064.9|CARM1|ENSG00000142453.12|coactivator associated arginine methyltransferase 1	ENST00000588947.5|CARM1|ENSG00000142453.12|coactivator associated arginine methyltransferase 1
hg38_v1_chr19_+_58476156_58476362	0.0473607	GLI3	ENST00000600013.5|ZNF446|ENSG00000083838.16|zinc finger protein 446	ENST00000594369.6|ZNF446|ENSG00000083838.16|zinc finger protein 446
hg38_v1_chr1_-_2633011_2633020	0.0466625	GLI3	ENST00000378412.8|MMEL1|ENSG00000142606.16|membrane metalloendopeptidase like 1
hg38_v1_chr12_+_133080875_133080945	0.0466328	GLI3	ENST00000412146.6|ZNF140|ENSG00000196387.10|zinc finger protein 140	ENST00000544426.5|ZNF140|ENSG00000196387.10|zinc finger protein 140	ENST00000355557.7|ZNF140|ENSG00000196387.10|zinc finger protein 140	ENST00000319849.7|ZNF140|ENSG00000196387.10|zinc finger protein 140	ENST00000440550.6|ZNF140|ENSG00000196387.10|zinc finger protein 140
hg38_v1_chr12_-_6689244_6689337	0.0460133	GLI3	ENST00000361959.7|ZNF384|ENSG00000126746.18|zinc finger protein 384	ENST00000436774.6|ZNF384|ENSG00000126746.18|zinc finger protein 384	ENST00000544482.1|ZNF384|ENSG00000126746.18|zinc finger protein 384
hg38_v1_chr8_-_29263063_29263079	0.0459097	GLI3	ENST00000524189.6|KIF13B|ENSG00000197892.13|kinesin family member 13B
hg38_v1_chr2_+_231961684_231961740	0.0458539	GLI3	ENST00000409401.7|DIS3L2|ENSG00000144535.20|DIS3 like 3'-5' exoribonuclease 2	ENST00000441279.5|DIS3L2|ENSG00000144535.20|DIS3 like 3'-5' exoribonuclease 2	ENST00000325385.12|DIS3L2|ENSG00000144535.20|DIS3 like 3'-5' exoribonuclease 2
hg38_v1_chr1_-_50023875_50023944	0.0456224	GLI3	ENST00000371836.1|AGBL4|ENSG00000186094.17|ATP/GTP binding protein like 4	ENST00000371838.5|AGBL4|ENSG00000186094.17|ATP/GTP binding protein like 4
hg38_v1_chr6_+_30721573_30721589	0.0453241	GLI3	ENST00000330914.7|TUBB|ENSG00000196230.14|tubulin beta class I
hg38_v1_chr12_+_120496101_120496121	0.0452751	GLI3	ENST00000550178.1|DYNLL1|ENSG00000088986.11|dynein light chain LC8-type 1	ENST00000550845.5|DYNLL1|ENSG00000088986.11|dynein light chain LC8-type 1	ENST00000549989.1|DYNLL1|ENSG00000088986.11|dynein light chain LC8-type 1	ENST00000552870.1|DYNLL1|ENSG00000088986.11|dynein light chain LC8-type 1	ENST00000242577.11|DYNLL1|ENSG00000088986.11|dynein light chain LC8-type 1
hg38_v1_chrX_-_153470555_153470592	0.04459	GLI3	ENST00000370211.10|HAUS7|ENSG00000213397.12|HAUS augmin like complex subunit 7	ENST00000330912.7|TREX2|ENSG00000183479.13|three prime repair exonuclease 2	ENST00000334497.7|TREX2|ENSG00000183479.13|three prime repair exonuclease 2	ENST00000338525.7|TREX2|ENSG00000183479.13|three prime repair exonuclease 2	ENST00000370232.4|TREX2|ENSG00000183479.13|three prime repair exonuclease 2
hg38_v1_chr3_-_52705654_52705715	0.0443368	GLI3	ENST00000497953.5|GLT8D1|ENSG00000016864.19|glycosyltransferase 8 domain containing 1
hg38_v1_chr22_-_42144549_42144577	0.0439447	GLI3	ENST00000614967.4|CYP2D7|ENSG00000205702.11|cytochrome P450 family 2 subfamily D member 7 (gene/pseudogene)	ENST00000612115.1|CYP2D7|ENSG00000205702.11|cytochrome P450 family 2 subfamily D member 7 (gene/pseudogene)
hg38_v1_chr16_+_57106021_57106060	0.0438125	GLI3	ENST00000566259.1|CPNE2|ENSG00000140848.17|copine 2
hg38_v1_chr8_-_144428502_144428563	0.0432147	GLI3	ENST00000531032.5|VPS28|ENSG00000160948.14|VPS28 subunit of ESCRT-I	ENST00000530790.5|VPS28|ENSG00000160948.14|VPS28 subunit of ESCRT-I	ENST00000292510.6|VPS28|ENSG00000160948.14|VPS28 subunit of ESCRT-I	ENST00000533806.5|VPS28|ENSG00000160948.14|VPS28 subunit of ESCRT-I	ENST00000377348.6|VPS28|ENSG00000160948.14|VPS28 subunit of ESCRT-I
hg38_v1_chr11_-_123885627_123885672	0.0423487	GLI3	ENST00000528595.1|TMEM225|ENSG00000204300.7|transmembrane protein 225	ENST00000375026.7|TMEM225|ENSG00000204300.7|transmembrane protein 225
hg38_v1_chrX_-_23743201_23743302	0.042178	GLI3	ENST00000492081.1|ACOT9|ENSG00000123130.17|acyl-CoA thioesterase 9	ENST00000379303.10|ACOT9|ENSG00000123130.17|acyl-CoA thioesterase 9	ENST00000336430.11|ACOT9|ENSG00000123130.17|acyl-CoA thioesterase 9
hg38_v1_chr22_+_50090028_50090065	0.0420154	GLI3	ENST00000395858.7|MOV10L1|ENSG00000073146.16|Mov10 like RISC complex RNA helicase 1
hg38_v1_chr17_+_16381462_16381467	0.0415908	GLI3	ENST00000578706.5|UBB|ENSG00000170315.14|ubiquitin B	ENST00000614404.1|UBB|ENSG00000170315.14|ubiquitin B
hg38_v1_chr4_-_48906805_48906828	0.0415182	GLI3	ENST00000620187.4|OCIAD2|ENSG00000145247.12|OCIA domain containing 2
hg38_v1_chr17_+_81902230_81902244	0.0415163	GLI3	ENST00000333383.8|NPB|ENSG00000183979.8|neuropeptide B
hg38_v1_chr2_-_241272812_241272886	0.0414816	GLI3	ENST00000427007.5|HDLBP|ENSG00000115677.18|high density lipoprotein binding protein	ENST00000458564.5|HDLBP|ENSG00000115677.18|high density lipoprotein binding protein	ENST00000452065.5|HDLBP|ENSG00000115677.18|high density lipoprotein binding protein	ENST00000427183.6|HDLBP|ENSG00000115677.18|high density lipoprotein binding protein	ENST00000426343.5|HDLBP|ENSG00000115677.18|high density lipoprotein binding protein	ENST00000422080.5|HDLBP|ENSG00000115677.18|high density lipoprotein binding protein	ENST00000449504.5|HDLBP|ENSG00000115677.18|high density lipoprotein binding protein	ENST00000449864.5|HDLBP|ENSG00000115677.18|high density lipoprotein binding protein	ENST00000391975.5|HDLBP|ENSG00000115677.18|high density lipoprotein binding protein
hg38_v1_chr6_-_166168700_166168727	0.0413164	GLI3	ENST00000366871.7|TBXT|ENSG00000164458.10|T-box transcription factor T
hg38_v1_chr4_-_95549199_95549222	0.0409728	GLI3	ENST00000504962.1|UNC5C|ENSG00000182168.15|unc-5 netrin receptor C	ENST00000506749.5|UNC5C|ENSG00000182168.15|unc-5 netrin receptor C
hg38_v1_chr6_+_106461464_106461471	0.0404939	GLI3	ENST00000651520.1|CRYBG1|ENSG00000112297.18|crystallin beta-gamma domain containing 1
hg38_v1_chr6_+_10887036_10887095	0.0403035	GLI3	ENST00000283141.11|SYCP2L|ENSG00000153157.13|synaptonemal complex protein 2 like
hg38_v1_chr3_+_11272309_11272385	0.0394106	GLI3	ENST00000451513.5|ATG7|ENSG00000197548.12|autophagy related 7	ENST00000435760.5|ATG7|ENSG00000197548.12|autophagy related 7	ENST00000451830.5|ATG7|ENSG00000197548.12|autophagy related 7
hg38_v1_chr6_-_33314386_33314435	0.0392124	GLI3	ENST00000456592.3|TAPBP|ENSG00000231925.12|TAP binding protein
hg38_v1_chr3_+_196774_196819	0.0388543	GLI3	ENST00000427688.5|CHL1|ENSG00000134121.10|cell adhesion molecule L1 like
hg38_v1_chr12_-_124989053_124989139	0.0386847	GLI3	ENST00000308736.7|DHX37|ENSG00000150990.9|DEAH-box helicase 37
hg38_v1_chr11_-_65873573_65873612	0.0385282	GLI3	ENST00000527378.1|EFEMP2|ENSG00000172638.13|EGF containing fibulin extracellular matrix protein 2
hg38_v1_chr1_+_11934651_11934779	0.0383135	GLI3	ENST00000449038.5|PLOD1|ENSG00000083444.17|procollagen-lysine,2-oxoglutarate 5-dioxygenase 1	ENST00000196061.5|PLOD1|ENSG00000083444.17|procollagen-lysine,2-oxoglutarate 5-dioxygenase 1	ENST00000429000.6|PLOD1|ENSG00000083444.17|procollagen-lysine,2-oxoglutarate 5-dioxygenase 1
hg38_v1_chr16_+_2988256_2988263	0.0375853	GLI3	ENST00000573315.2|LINC00514|ENSG00000262152.7|long intergenic non-protein coding RNA 514
hg38_v1_chr3_-_139539679_139539829	0.0375463	GLI3	ENST00000483943.6|RBP1|ENSG00000114115.10|retinol binding protein 1	ENST00000672186.1|RBP1|ENSG00000114115.10|retinol binding protein 1	ENST00000232219.6|RBP1|ENSG00000114115.10|retinol binding protein 1	ENST00000617459.4|RBP1|ENSG00000114115.10|retinol binding protein 1	ENST00000492918.1|RBP1|ENSG00000114115.10|retinol binding protein 1
hg38_v1_chr6_+_89562620_89562647	0.0375176	GLI3	ENST00000522779.5|ANKRD6|ENSG00000135299.17|ankyrin repeat domain 6
hg38_v1_chr9_+_137255277_137255375	0.0371737	GLI3	ENST00000343053.6|NELFB|ENSG00000188986.9|negative elongation factor complex member B
hg38_v1_chr16_-_71289609_71289728	0.0368775	GLI3	ENST00000338099.9|CMTR2|ENSG00000180917.18|cap methyltransferase 2	ENST00000563876.1|CMTR2|ENSG00000180917.18|cap methyltransferase 2
hg38_v1_chr15_+_85380672_85380756	0.0367973	GLI3	ENST00000361243.6|AKAP13|ENSG00000170776.22|A-kinase anchoring protein 13	ENST00000560256.1|AKAP13|ENSG00000170776.22|A-kinase anchoring protein 13
hg38_v1_chr17_+_82716698_82716787	0.0364461	GLI3	ENST00000269373.11|FN3KRP|ENSG00000141560.15|fructosamine 3 kinase related protein	ENST00000577128.1|FN3KRP|ENSG00000141560.15|fructosamine 3 kinase related protein	ENST00000573158.5|FN3KRP|ENSG00000141560.15|fructosamine 3 kinase related protein
hg38_v1_chr4_+_89111521_89111547	0.0362362	GLI3	ENST00000603357.3|TIGD2|ENSG00000180346.4|tigger transposable element derived 2
hg38_v1_chr10_-_101032289_101032303	0.0359185	GLI3	ENST00000644576.1|PDZD7|ENSG00000186862.20|PDZ domain containing 7
hg38_v1_chr22_+_50089879_50090010	0.0356874	GLI3	ENST00000545383.5|MOV10L1|ENSG00000073146.16|Mov10 like RISC complex RNA helicase 1	ENST00000262794.10|MOV10L1|ENSG00000073146.16|Mov10 like RISC complex RNA helicase 1
hg38_v1_chr1_-_37692205_37692281	0.035655	GLI3	ENST00000477060.1|C1orf109|ENSG00000116922.15|chromosome 1 open reading frame 109	ENST00000491981.5|C1orf109|ENSG00000116922.15|chromosome 1 open reading frame 109	ENST00000488137.5|C1orf109|ENSG00000116922.15|chromosome 1 open reading frame 109	ENST00000619962.1|C1orf109|ENSG00000116922.15|chromosome 1 open reading frame 109
hg38_v1_chr16_+_1680337_1680368	0.0356049	GLI3	ENST00000566691.5|JPT2|ENSG00000206053.13|Jupiter microtubule associated homolog 2	ENST00000382710.8|JPT2|ENSG00000206053.13|Jupiter microtubule associated homolog 2
hg38_v1_chr2_-_223838022_223838044	0.0355937	GLI3	ENST00000444408.1|AP1S3|ENSG00000152056.17|adaptor related protein complex 1 subunit sigma 3
hg38_v1_chr19_-_20565808_20565811	0.0352107	GLI3	ENST00000596797.1|ZNF737|ENSG00000237440.9|zinc finger protein 737
hg38_v1_chr16_+_19285724_19285781	0.0351635	GLI3	ENST00000636231.2|CLEC19A|ENSG00000261210.8|C-type lectin domain containing 19A	ENST00000493231.5|CLEC19A|ENSG00000261210.8|C-type lectin domain containing 19A	ENST00000465414.1|CLEC19A|ENSG00000261210.8|C-type lectin domain containing 19A
hg38_v1_chr1_+_180928133_180928159	0.0350648	GLI3	ENST00000367587.1|KIAA1614|ENSG00000135835.12|KIAA1614
hg38_v1_chr5_+_81972157_81972287	0.034998	GLI3	ENST00000513443.5|ATG10|ENSG00000152348.16|autophagy related 10
hg38_v1_chr6_-_109440504_109440663	0.0346018	GLI3	ENST00000520723.5|PPIL6|ENSG00000185250.16|peptidylprolyl isomerase like 6	ENST00000518648.1|PPIL6|ENSG00000185250.16|peptidylprolyl isomerase like 6	ENST00000417394.6|PPIL6|ENSG00000185250.16|peptidylprolyl isomerase like 6	ENST00000521072.7|PPIL6|ENSG00000185250.16|peptidylprolyl isomerase like 6
hg38_v1_chr15_-_101652365_101652394	0.0340874	GLI3	ENST00000428002.6|TM2D3|ENSG00000184277.13|TM2 domain containing 3	ENST00000333202.8|TM2D3|ENSG00000184277.13|TM2 domain containing 3	ENST00000559107.5|TM2D3|ENSG00000184277.13|TM2 domain containing 3	ENST00000347970.7|TM2D3|ENSG00000184277.13|TM2 domain containing 3
hg38_v1_chr12_+_57460127_57460151	0.0335957	GLI3	ENST00000532291.5|GLI1|ENSG00000111087.10|GLI family zinc finger 1	ENST00000543426.5|GLI1|ENSG00000111087.10|GLI family zinc finger 1	ENST00000546141.5|GLI1|ENSG00000111087.10|GLI family zinc finger 1
hg38_v1_chr17_-_341417_341425	0.0331359	GLI3	ENST00000575634.5|RPH3AL|ENSG00000181031.16|rabphilin 3A like (without C2 domains)
hg38_v1_chr1_-_85048437_85048519	0.0326465	GLI3	ENST00000341115.8|MCOLN3|ENSG00000055732.13|mucolipin TRP cation channel 3	ENST00000370587.5|MCOLN3|ENSG00000055732.13|mucolipin TRP cation channel 3	ENST00000370589.7|MCOLN3|ENSG00000055732.13|mucolipin TRP cation channel 3
hg38_v1_chr17_-_7857139_7857268	0.0322312	GLI3	ENST00000576384.1|NAA38|ENSG00000183011.14|N-alpha-acetyltransferase 38, NatC auxiliary subunit
hg38_v1_chr11_-_71928624_71928671	0.0322095	GLI3	ENST00000533047.5|ENSG00000254469.9|ENSG00000254469.9|novel protein similar to transient receptor potential cation channel, subfamily C, member 2 TRPC2	ENST00000529844.5|ENSG00000254469.9|ENSG00000254469.9|novel protein similar to transient receptor potential cation channel, subfamily C, member 2 TRPC2
hg38_v1_chr12_-_53321544_53321627	0.0319773	GLI3	ENST00000394384.7|AAAS|ENSG00000094914.14|aladin WD repeat nucleoporin	ENST00000209873.9|AAAS|ENSG00000094914.14|aladin WD repeat nucleoporin
hg38_v1_chr3_-_177197248_177197260	0.0316847	GLI3	ENST00000427349.5|TBL1XR1|ENSG00000177565.18|TBL1X receptor 1	ENST00000352800.10|TBL1XR1|ENSG00000177565.18|TBL1X receptor 1
hg38_v1_chr8_+_22999535_22999569	0.0316531	GLI3	ENST00000251822.7|RHOBTB2|ENSG00000008853.17|Rho related BTB domain containing 2
hg38_v1_chr9_-_92670124_92670162	0.0316315	GLI3	ENST00000287996.8|IPPK|ENSG00000127080.10|inositol-pentakisphosphate 2-kinase
hg38_v1_chr3_+_100609594_100609615	0.0313272	GLI3	ENST00000273352.8|ADGRG7|ENSG00000144820.8|adhesion G protein-coupled receptor G7
hg38_v1_chr21_-_31344241_31344294	0.0313061	GLI3	ENST00000455508.1|TIAM1|ENSG00000156299.13|TIAM Rac1 associated GEF 1
hg38_v1_chr8_+_106270161_106270265	0.0304283	GLI3	ENST00000517566.7|OXR1|ENSG00000164830.19|oxidation resistance 1	ENST00000531443.6|OXR1|ENSG00000164830.19|oxidation resistance 1
hg38_v1_chr19_+_57389957_57390017	0.0303418	GLI3	ENST00000596400.1|ENSG00000269533.5|ENSG00000269533.5|novel transcript
hg38_v1_chr1_+_180928427_180928460	0.0300812	GLI3	ENST00000483705.6|KIAA1614|ENSG00000135835.12|KIAA1614
hg38_v1_chr20_+_44885679_44885758	0.0299934	GLI3	ENST00000353703.9|YWHAB|ENSG00000166913.13|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein beta	ENST00000372839.7|YWHAB|ENSG00000166913.13|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein beta	ENST00000428262.1|YWHAB|ENSG00000166913.13|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein beta	ENST00000445830.1|YWHAB|ENSG00000166913.13|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein beta
hg38_v1_chr16_-_57798091_57798133	0.0297742	GLI3	ENST00000562503.5|KIFC3|ENSG00000140859.16|kinesin family member C3
hg38_v1_chr11_-_119057169_119057184	0.0292829	GLI3	ENST00000527038.6|HYOU1|ENSG00000149428.19|hypoxia up-regulated 1
hg38_v1_chr17_+_38127951_38127951	0.0289348	GLI3	ENST00000621587.2|TBC1D3E|ENSG00000278599.6|TBC1 domain family member 3E
hg38_v1_chr3_-_122564253_122564315	0.0287193	GLI3	ENST00000492382.5|PARP9|ENSG00000138496.17|poly(ADP-ribose) polymerase family member 9	ENST00000682323.1|PARP9|ENSG00000138496.17|poly(ADP-ribose) polymerase family member 9	ENST00000462315.5|PARP9|ENSG00000138496.17|poly(ADP-ribose) polymerase family member 9
hg38_v1_chr12_+_31074258_31074277	0.0285559	GLI3	ENST00000535317.5|DDX11|ENSG00000013573.17|DEAD/H-box helicase 11
hg38_v1_chr17_-_7857461_7857578	0.0281892	GLI3	ENST00000575771.6|NAA38|ENSG00000183011.14|N-alpha-acetyltransferase 38, NatC auxiliary subunit	ENST00000575071.5|NAA38|ENSG00000183011.14|N-alpha-acetyltransferase 38, NatC auxiliary subunit
hg38_v1_chr7_-_6447920_6447976	0.0280076	GLI3	ENST00000425398.6|DAGLB|ENSG00000164535.15|diacylglycerol lipase beta	ENST00000432248.1|DAGLB|ENSG00000164535.15|diacylglycerol lipase beta	ENST00000297056.11|DAGLB|ENSG00000164535.15|diacylglycerol lipase beta
hg38_v1_chr3_-_177197429_177197492	0.0275694	GLI3	ENST00000457928.7|TBL1XR1|ENSG00000177565.18|TBL1X receptor 1
hg38_v1_chr6_+_41042557_41042718	0.027557	GLI3	ENST00000373158.6|TSPO2|ENSG00000112212.12|translocator protein 2	ENST00000470917.1|TSPO2|ENSG00000112212.12|translocator protein 2
hg38_v1_chr9_+_78236037_78236351	0.0271831	GLI3	ENST00000424347.6|CEP78|ENSG00000148019.14|centrosomal protein 78	ENST00000645398.1|CEP78|ENSG00000148019.14|centrosomal protein 78	ENST00000643347.1|CEP78|ENSG00000148019.14|centrosomal protein 78	ENST00000643273.2|CEP78|ENSG00000148019.14|centrosomal protein 78	ENST00000647199.1|CEP78|ENSG00000148019.14|centrosomal protein 78	ENST00000643847.1|CEP78|ENSG00000148019.14|centrosomal protein 78	ENST00000643499.1|CEP78|ENSG00000148019.14|centrosomal protein 78	ENST00000415759.6|CEP78|ENSG00000148019.14|centrosomal protein 78	ENST00000376597.9|CEP78|ENSG00000148019.14|centrosomal protein 78	ENST00000277082.9|CEP78|ENSG00000148019.14|centrosomal protein 78	ENST00000642669.1|CEP78|ENSG00000148019.14|centrosomal protein 78	ENST00000642214.1|CEP78|ENSG00000148019.14|centrosomal protein 78	ENST00000644208.1|CEP78|ENSG00000148019.14|centrosomal protein 78	ENST00000376598.3|CEP78|ENSG00000148019.14|centrosomal protein 78
hg38_v1_chr6_-_43369636_43369673	0.0267885	GLI3	ENST00000361428.3|ZNF318|ENSG00000171467.16|zinc finger protein 318
hg38_v1_chr11_-_71448315_71448403	0.026466	GLI3	ENST00000525346.5|DHCR7|ENSG00000172893.17|7-dehydrocholesterol reductase	ENST00000531364.5|DHCR7|ENSG00000172893.17|7-dehydrocholesterol reductase	ENST00000529990.5|DHCR7|ENSG00000172893.17|7-dehydrocholesterol reductase	ENST00000527316.5|DHCR7|ENSG00000172893.17|7-dehydrocholesterol reductase	ENST00000355527.8|DHCR7|ENSG00000172893.17|7-dehydrocholesterol reductase	ENST00000407721.6|DHCR7|ENSG00000172893.17|7-dehydrocholesterol reductase
hg38_v1_chr9_+_137665916_137665956	0.0263244	GLI3	ENST00000636027.1|EHMT1|ENSG00000181090.21|euchromatic histone lysine methyltransferase 1
hg38_v1_chr17_-_1516699_1516742	0.0259616	GLI3	ENST00000320345.10|INPP5K|ENSG00000132376.20|inositol polyphosphate-5-phosphatase K	ENST00000406424.8|INPP5K|ENSG00000132376.20|inositol polyphosphate-5-phosphatase K
hg38_v1_chr17_-_36176636_36176636	0.0242513	GLI3	ENST00000611257.5|TBC1D3B|ENSG00000274808.6|TBC1 domain family member 3B	ENST00000616006.1|TBC1D3B|ENSG00000274808.6|TBC1 domain family member 3B
hg38_v1_chr3_+_184363387_184363420	0.0239725	GLI3	ENST00000452961.5|POLR2H|ENSG00000163882.9|RNA polymerase II, I and III subunit H
hg38_v1_chr11_-_71448406_71448440	0.0238495	GLI3	ENST00000682708.1|DHCR7|ENSG00000172893.17|7-dehydrocholesterol reductase	ENST00000683287.1|DHCR7|ENSG00000172893.17|7-dehydrocholesterol reductase	ENST00000683714.1|DHCR7|ENSG00000172893.17|7-dehydrocholesterol reductase	ENST00000682880.1|DHCR7|ENSG00000172893.17|7-dehydrocholesterol reductase
hg38_v1_chr11_+_77066985_77067000	0.0228352	GLI3	ENST00000456580.6|CAPN5|ENSG00000149260.18|calpain 5
hg38_v1_chr5_-_43412323_43412397	0.0228226	GLI3	ENST00000361115.4|CCL28|ENSG00000151882.11|C-C motif chemokine ligand 28
hg38_v1_chr15_-_29269750_29269834	0.0227175	GLI3	ENST00000332303.6|NSMCE3|ENSG00000185115.6|NSE3 homolog, SMC5-SMC6 complex component
hg38_v1_chr8_-_23457677_23457721	0.0226997	GLI3	ENST00000356206.10|ENTPD4|ENSG00000197217.13|ectonucleoside triphosphate diphosphohydrolase 4	ENST00000417069.6|ENTPD4|ENSG00000197217.13|ectonucleoside triphosphate diphosphohydrolase 4
hg38_v1_chr2_-_24085186_24085215	0.0226079	GLI3	ENST00000335934.8|TP53I3|ENSG00000115129.14|tumor protein p53 inducible protein 3
hg38_v1_chr1_+_35079374_35079413	0.0225099	GLI3	ENST00000359858.9|ZMYM1|ENSG00000197056.11|zinc finger MYM-type containing 1	ENST00000373330.1|ZMYM1|ENSG00000197056.11|zinc finger MYM-type containing 1
hg38_v1_chr11_+_90134634_90134738	0.0221678	GLI3	ENST00000534061.6|NAALAD2|ENSG00000077616.11|N-acetylated alpha-linked acidic dipeptidase 2	ENST00000321955.8|NAALAD2|ENSG00000077616.11|N-acetylated alpha-linked acidic dipeptidase 2	ENST00000525171.5|NAALAD2|ENSG00000077616.11|N-acetylated alpha-linked acidic dipeptidase 2	ENST00000375944.7|NAALAD2|ENSG00000077616.11|N-acetylated alpha-linked acidic dipeptidase 2
hg38_v1_chr3_-_52834901_52834915	0.0220595	GLI3	ENST00000486659.5|MUSTN1|ENSG00000272573.6|musculoskeletal, embryonic nuclear protein 1
hg38_v1_chr17_+_732560_732616	0.0205353	GLI3	ENST00000301324.8|TLCD3A|ENSG00000167695.15|TLC domain containing 3A	ENST00000308278.13|TLCD3A|ENSG00000167695.15|TLC domain containing 3A
hg38_v1_chr19_+_58467045_58467089	0.0200607	GLI3	ENST00000535298.5|ZNF324|ENSG00000083812.12|zinc finger protein 324	ENST00000536459.6|ZNF324|ENSG00000083812.12|zinc finger protein 324	ENST00000196482.4|ZNF324|ENSG00000083812.12|zinc finger protein 324
hg38_v1_chr19_+_3708342_3708376	0.0198359	GLI3	ENST00000590545.5|TJP3|ENSG00000105289.15|tight junction protein 3
hg38_v1_chr3_-_53046658_53046686	0.0192525	GLI3	ENST00000483069.5|SFMBT1|ENSG00000163935.14|Scm like with four mbt domains 1
hg38_v1_chr3_+_151086889_151086911	0.01841	GLI3	ENST00000474524.5|MED12L|ENSG00000144893.12|mediator complex subunit 12L	ENST00000273432.8|MED12L|ENSG00000144893.12|mediator complex subunit 12L
hg38_v1_chr16_-_69356306_69356306	0.0183685	GLI3	ENST00000563634.1|ENSG00000260371.1|ENSG00000260371.1|novel protein
hg38_v1_chr9_-_38705545_38705545	0.0178649	GLI3	ENST00000637691.1|FAM240B|ENSG00000283329.1|family with sequence similarity 240 member B
hg38_v1_chr17_+_48107743_48107894	0.0175933	GLI3	ENST00000359238.7|SNX11|ENSG00000002919.15|sorting nexin 11	ENST00000582104.5|SNX11|ENSG00000002919.15|sorting nexin 11	ENST00000584335.5|SNX11|ENSG00000002919.15|sorting nexin 11
hg38_v1_chr19_+_7534711_7534756	0.0173406	GLI3	ENST00000414982.7|PNPLA6|ENSG00000032444.17|patatin like phospholipase domain containing 6	ENST00000450331.7|PNPLA6|ENSG00000032444.17|patatin like phospholipase domain containing 6
hg38_v1_chr2_-_175005256_175005268	0.0168482	GLI3	ENST00000451799.2|CHN1|ENSG00000128656.15|chimerin 1
hg38_v1_chr16_-_71884113_71884204	0.0152701	GLI3	ENST00000568666.5|ZNF821|ENSG00000102984.15|zinc finger protein 821	ENST00000562797.5|ZNF821|ENSG00000102984.15|zinc finger protein 821	ENST00000425432.6|ZNF821|ENSG00000102984.15|zinc finger protein 821	ENST00000313565.10|ZNF821|ENSG00000102984.15|zinc finger protein 821	ENST00000611294.4|ZNF821|ENSG00000102984.15|zinc finger protein 821	ENST00000564134.5|ZNF821|ENSG00000102984.15|zinc finger protein 821
hg38_v1_chr10_+_74151232_74151240	0.0152665	GLI3	ENST00000478611.2|ADK|ENSG00000156110.15|adenosine kinase	ENST00000673352.1|ADK|ENSG00000156110.15|adenosine kinase
hg38_v1_chr12_-_21774688_21774730	0.0150766	GLI3	ENST00000240662.3|KCNJ8|ENSG00000121361.5|potassium inwardly rectifying channel subfamily J member 8
hg38_v1_chr6_-_31795475_31795499	0.0148093	GLI3	ENST00000440048.1|VARS1|ENSG00000204394.13|valyl-tRNA synthetase 1
hg38_v1_chr15_+_85380625_85380654	0.0141514	GLI3	ENST00000560302.5|AKAP13|ENSG00000170776.22|A-kinase anchoring protein 13
hg38_v1_chr19_+_43580544_43580638	0.0138583	GLI3	ENST00000562255.5|PINLYP|ENSG00000234465.11|phospholipase A2 inhibitor and LY6/PLAUR domain containing	ENST00000569031.6|PINLYP|ENSG00000234465.11|phospholipase A2 inhibitor and LY6/PLAUR domain containing
hg38_v1_chr9_-_111038061_111038093	0.0133542	GLI3	ENST00000358883.8|LPAR1|ENSG00000198121.14|lysophosphatidic acid receptor 1
hg38_v1_chr17_+_38003976_38003976	0.0128857	GLI3	ENST00000616101.4|TBC1D3D|ENSG00000274419.6|TBC1 domain family member 3D
hg38_v1_chr15_+_75843307_75843378	0.012663	GLI3	ENST00000569423.5|UBE2Q2|ENSG00000140367.12|ubiquitin conjugating enzyme E2 Q2
hg38_v1_chr9_-_83063135_83063149	0.0124163	GLI3	ENST00000376447.4|RASEF|ENSG00000165105.10|RAS and EF-hand domain containing
hg38_v1_chr11_-_61917490_61917602	0.0123796	GLI3	ENST00000394836.7|RAB3IL1|ENSG00000167994.13|RAB3A interacting protein like 1
hg38_v1_chr2_-_27323072_27323114	0.011718	GLI3	ENST00000428910.5|MPV17|ENSG00000115204.15|mitochondrial inner membrane protein MPV17	ENST00000402722.5|MPV17|ENSG00000115204.15|mitochondrial inner membrane protein MPV17	ENST00000380044.6|MPV17|ENSG00000115204.15|mitochondrial inner membrane protein MPV17	ENST00000399052.8|MPV17|ENSG00000115204.15|mitochondrial inner membrane protein MPV17	ENST00000405076.5|MPV17|ENSG00000115204.15|mitochondrial inner membrane protein MPV17
hg38_v1_chr3_-_177197210_177197233	0.0116063	GLI3	ENST00000431421.5|TBL1XR1|ENSG00000177565.18|TBL1X receptor 1	ENST00000422066.5|TBL1XR1|ENSG00000177565.18|TBL1X receptor 1	ENST00000413084.5|TBL1XR1|ENSG00000177565.18|TBL1X receptor 1	ENST00000673974.1|TBL1XR1|ENSG00000177565.18|TBL1X receptor 1	ENST00000422442.6|TBL1XR1|ENSG00000177565.18|TBL1X receptor 1
hg38_v1_chr1_+_15152558_15152577	0.0113052	GLI3	ENST00000376014.7|TMEM51|ENSG00000171729.14|transmembrane protein 51	ENST00000451326.6|TMEM51|ENSG00000171729.14|transmembrane protein 51
hg38_v1_chr6_-_31703275_31703365	0.0112977	GLI3	ENST00000395952.8|ABHD16A|ENSG00000204427.12|abhydrolase domain containing 16A, phospholipase
hg38_v1_chr9_-_83956677_83956767	0.0111428	GLI3	ENST00000376344.8|C9orf64|ENSG00000165118.15|chromosome 9 open reading frame 64
hg38_v1_chr5_+_181147586_181147638	0.0111388	GLI3	ENST00000641492.1|OR2V2|ENSG00000182613.3|olfactory receptor family 2 subfamily V member 2	ENST00000641791.1|OR2V2|ENSG00000182613.3|olfactory receptor family 2 subfamily V member 2
hg38_v1_chr10_+_132332273_132332292	0.0108053	GLI3	ENST00000368613.8|LRRC27|ENSG00000148814.18|leucine rich repeat containing 27
hg38_v1_chr17_-_81937221_81937274	0.010479	GLI3	ENST00000402252.6|PYCR1|ENSG00000183010.17|pyrroline-5-carboxylate reductase 1	ENST00000583564.5|PYCR1|ENSG00000183010.17|pyrroline-5-carboxylate reductase 1	ENST00000585244.1|PYCR1|ENSG00000183010.17|pyrroline-5-carboxylate reductase 1	ENST00000337943.9|PYCR1|ENSG00000183010.17|pyrroline-5-carboxylate reductase 1	ENST00000579698.5|PYCR1|ENSG00000183010.17|pyrroline-5-carboxylate reductase 1
hg38_v1_chr21_-_7829587_7829632	0.0102575	GLI3	ENST00000623803.1|KCNE1B|ENSG00000276289.5|potassium voltage-gated channel subfamily E regulatory subunit 1B	ENST00000618699.3|KCNE1B|ENSG00000276289.5|potassium voltage-gated channel subfamily E regulatory subunit 1B
hg38_v1_chr19_-_39532809_39532857	0.0100085	GLI3	ENST00000326282.5|EID2B|ENSG00000176401.6|EP300 interacting inhibitor of differentiation 2B
hg38_v1_chr17_+_4143670_4143744	0.00978018	GLI3	ENST00000573984.1|CYB5D2|ENSG00000167740.10|cytochrome b5 domain containing 2
hg38_v1_chr16_+_649319_649350	0.00977855	GLI3	ENST00000549091.5|WDR90|ENSG00000161996.19|WD repeat domain 90
hg38_v1_chr19_-_49057730_49057754	0.00954966	GLI3	ENST00000684222.1|CGB7|ENSG00000196337.13|chorionic gonadotropin subunit beta 7	ENST00000596965.5|CGB7|ENSG00000196337.13|chorionic gonadotropin subunit beta 7
hg38_v1_chr5_+_103120314_103120399	0.0088751	GLI3	ENST00000613674.4|PPIP5K2|ENSG00000145725.20|diphosphoinositol pentakisphosphate kinase 2
hg38_v1_chr9_+_100427254_100427319	0.00881217	GLI3	ENST00000374885.5|MSANTD3|ENSG00000066697.15|Myb/SANT DNA binding domain containing 3
hg38_v1_chr17_+_18744026_18744075	0.00829622	GLI3	ENST00000308799.8|FBXW10|ENSG00000171931.13|F-box and WD repeat domain containing 10	ENST00000395665.9|FBXW10|ENSG00000171931.13|F-box and WD repeat domain containing 10	ENST00000301938.4|FBXW10|ENSG00000171931.13|F-box and WD repeat domain containing 10
hg38_v1_chr11_-_120123026_120123070	0.00819456	GLI3	ENST00000533302.5|TRIM29|ENSG00000137699.17|tripartite motif containing 29
hg38_v1_chr5_-_43483827_43483900	0.00802859	GLI3	ENST00000500337.6|TMEM267|ENSG00000151881.15|transmembrane protein 267	ENST00000506860.1|TMEM267|ENSG00000151881.15|transmembrane protein 267	ENST00000397080.8|TMEM267|ENSG00000151881.15|transmembrane protein 267	ENST00000510130.1|TMEM267|ENSG00000151881.15|transmembrane protein 267	ENST00000512085.5|TMEM267|ENSG00000151881.15|transmembrane protein 267
hg38_v1_chr9_-_95516959_95517057	0.00795889	GLI3	ENST00000437951.6|PTCH1|ENSG00000185920.17|patched 1	ENST00000430669.6|PTCH1|ENSG00000185920.17|patched 1	ENST00000468211.6|PTCH1|ENSG00000185920.17|patched 1
hg38_v1_chr22_-_30574511_30574556	0.00784418	GLI3	ENST00000431313.5|GAL3ST1|ENSG00000128242.13|galactose-3-O-sulfotransferase 1
hg38_v1_chr1_+_923914_923933	0.00771689	GLI3	ENST00000616016.5|SAMD11|ENSG00000187634.13|sterile alpha motif domain containing 11	ENST00000618323.5|SAMD11|ENSG00000187634.13|sterile alpha motif domain containing 11
hg38_v1_chr16_-_89720861_89720948	0.00731357	GLI3	ENST00000389386.8|VPS9D1|ENSG00000075399.14|VPS9 domain containing 1
hg38_v1_chr8_+_102551583_102551602	0.00678237	GLI3	ENST00000285402.4|ODF1|ENSG00000155087.4|outer dense fiber of sperm tails 1
hg38_v1_chr16_-_20073890_20073890	0.00673332	GLI3	ENST00000570682.2|GPR139|ENSG00000180269.8|G protein-coupled receptor 139
hg38_v1_chr3_+_56557155_56557229	0.00670512	GLI3	ENST00000422222.5|CCDC66|ENSG00000180376.17|coiled-coil domain containing 66	ENST00000394672.8|CCDC66|ENSG00000180376.17|coiled-coil domain containing 66	ENST00000326595.11|CCDC66|ENSG00000180376.17|coiled-coil domain containing 66
hg38_v1_chr1_+_18631006_18631129	0.00665066	GLI3	ENST00000375375.7|PAX7|ENSG00000009709.12|paired box 7
hg38_v1_chr7_-_144403693_144403693	0.00657915	GLI3	ENST00000645489.1|NOBOX|ENSG00000106410.15|NOBOX oogenesis homeobox	ENST00000643164.1|NOBOX|ENSG00000106410.15|NOBOX oogenesis homeobox
hg38_v1_chrX_-_11290478_11290490	0.00610854	GLI3	ENST00000380717.7|ARHGAP6|ENSG00000047648.23|Rho GTPase activating protein 6
hg38_v1_chr19_-_12333705_12333729	0.0060427	GLI3	ENST00000595977.5|ZNF563|ENSG00000188868.14|zinc finger protein 563
hg38_v1_chr17_+_16690223_16690325	0.00600568	GLI3	ENST00000340621.9|CCDC144A|ENSG00000170160.17|coiled-coil domain containing 144A	ENST00000399273.5|CCDC144A|ENSG00000170160.17|coiled-coil domain containing 144A	ENST00000456009.4|CCDC144A|ENSG00000170160.17|coiled-coil domain containing 144A	ENST00000360524.12|CCDC144A|ENSG00000170160.17|coiled-coil domain containing 144A
hg38_v1_chr2_-_24084822_24084841	0.00574324	GLI3	ENST00000238721.9|TP53I3|ENSG00000115129.14|tumor protein p53 inducible protein 3
hg38_v1_chr4_-_16226460_16226485	0.00564947	GLI3	ENST00000405303.7|TAPT1|ENSG00000169762.17|transmembrane anterior posterior transformation 1
hg38_v1_chr1_+_35930712_35930755	0.00562271	GLI3	ENST00000324350.9|AGO3|ENSG00000126070.20|argonaute RISC catalytic component 3
hg38_v1_chr13_+_77697679_77697699	0.00554023	GLI3	ENST00000418532.6|SLAIN1|ENSG00000139737.22|SLAIN motif family member 1
hg38_v1_chrX_-_48196763_48196797	0.00512491	GLI3	ENST00000311798.5|SSX5|ENSG00000165583.16|SSX family member 5	ENST00000347757.6|SSX5|ENSG00000165583.16|SSX family member 5
hg38_v1_chrX_+_13655295_13655295	0.00450538	GLI3	ENST00000380600.1|TCEANC|ENSG00000176896.8|transcription elongation factor A N-terminal and central domain containing
hg38_v1_chr19_-_38256513_38256532	0.00395001	GLI3	ENST00000347262.8|PPP1R14A|ENSG00000167641.11|protein phosphatase 1 regulatory inhibitor subunit 14A	ENST00000591585.1|PPP1R14A|ENSG00000167641.11|protein phosphatase 1 regulatory inhibitor subunit 14A
hg38_v1_chr4_-_7068033_7068088	0.00370731	GLI3	ENST00000264954.5|GRPEL1|ENSG00000109519.13|GrpE like 1, mitochondrial
hg38_v1_chr4_-_993376_993413	0.00369444	GLI3	ENST00000398520.6|SLC26A1|ENSG00000145217.14|solute carrier family 26 member 1	ENST00000398516.3|SLC26A1|ENSG00000145217.14|solute carrier family 26 member 1
hg38_v1_chr1_-_227735233_227735411	0.00368222	GLI3	ENST00000620518.5|JMJD4|ENSG00000081692.13|jumonji domain containing 4	ENST00000438896.3|JMJD4|ENSG00000081692.13|jumonji domain containing 4
hg38_v1_chrX_+_72912615_72912615	0.00291017	GLI3	ENST00000636532.1|FAM236C|ENSG00000283594.1|family with sequence similarity 236 member C	ENST00000636267.1|FAM236C|ENSG00000283594.1|family with sequence similarity 236 member C
hg38_v1_chr20_-_63951122_63951131	0.00291011	GLI3	ENST00000369908.9|UCKL1|ENSG00000198276.16|uridine-cytidine kinase 1 like 1
hg38_v1_chr6_+_43489579_43489621	0.00286294	GLI3	ENST00000438588.6|TJAP1|ENSG00000137221.14|tight junction associated protein 1
hg38_v1_chr14_+_23306958_23306980	0.00171105	GLI3	ENST00000554635.1|BCL2L2|ENSG00000129473.11|BCL2 like 2	ENST00000557008.2|BCL2L2-PABPN1|ENSG00000258643.6|BCL2L2-PABPN1 readthrough
hg38_v1_chr19_-_58511981_58511999	0.0016379	GLI3	ENST00000263093.7|SLC27A5|ENSG00000083807.10|solute carrier family 27 member 5	ENST00000601355.1|SLC27A5|ENSG00000083807.10|solute carrier family 27 member 5
hg38_v1_chr3_+_197286_197323	0.0015499	GLI3	ENST00000421198.5|CHL1|ENSG00000134121.10|cell adhesion molecule L1 like
hg38_v1_chr12_-_6689359_6689380	0.00140863	GLI3	ENST00000683879.1|ZNF384|ENSG00000126746.18|zinc finger protein 384
hg38_v1_chr10_-_48251757_48251792	0.00133874	GLI3	ENST00000305531.3|FRMPD2|ENSG00000170324.21|FERM and PDZ domain containing 2
hg38_v1_chr15_+_31366138_31366156	0.00133711	GLI3	ENST00000558844.1|KLF13|ENSG00000169926.11|Kruppel like factor 13
hg38_v1_chr12_-_6493295_6493306	0.00128341	GLI3	ENST00000540949.1|MRPL51|ENSG00000111639.8|mitochondrial ribosomal protein L51
hg38_v1_chr21_-_32612535_32612573	0.000710109	GLI3	ENST00000673945.1|CFAP298-TCP10L|ENSG00000265590.10|CFAP298-TCP10L readthrough	ENST00000458138.1|CFAP298|ENSG00000159079.19|cilia and flagella associated protein 298
hg38_v1_chr10_-_27155214_27155266	0.00052855	GLI3	ENST00000477432.1|YME1L1|ENSG00000136758.19|YME1 like 1 ATPase
