mm10_v2_chr11_-_110095937_110095969	3.16258	Bhlhe40	ENSMUST00000106664.3|Abca8a|ENSMUSG00000041828.9|ATP-binding cassette, sub-family A (ABC1), member 8a 	ENSMUST00000046223.7|Abca8a|ENSMUSG00000041828.9|ATP-binding cassette, sub-family A (ABC1), member 8a 	ENSMUST00000106662.1|Abca8a|ENSMUSG00000041828.9|ATP-binding cassette, sub-family A (ABC1), member 8a
mm10_v2_chr7_+_121707189_121707189	2.24149	Bhlhe40	ENSMUST00000065310.2|1700069B07Rik|ENSMUSG00000053081.2|RIKEN cDNA 1700069B07 gene
mm10_v2_chr11_-_110095974_110096043	1.94659	Bhlhe40	ENSMUST00000100287.2|Abca8a|ENSMUSG00000041828.9|ATP-binding cassette, sub-family A (ABC1), member 8a
mm10_v2_chr16_+_8830093_8830104	1.73628	Bhlhe40	ENSMUST00000023150.5|1810013L24Rik|ENSMUSG00000022507.5|RIKEN cDNA 1810013L24 gene
mm10_v2_chr5_+_65199691_65199735	1.64007	Bhlhe40	ENSMUST00000041892.8|Wdr19|ENSMUSG00000037890.9|WD repeat domain 19
mm10_v2_chr5_+_123252087_123252136	1.49675	Bhlhe40	ENSMUST00000121964.1|Wdr66|ENSMUSG00000029442.12|WD repeat domain 66
mm10_v2_chr7_+_35802593_35802593	1.38109	Bhlhe40	ENSMUST00000052454.2|E130304I02Rik|ENSMUSG00000044997.2|RIKEN cDNA E130304I02 gene
mm10_v2_chr7_-_35802968_35803007	1.25761	Bhlhe40	ENSMUST00000061586.4|Zfp507|ENSMUSG00000044452.4|zinc finger protein 507
mm10_v2_chr2_+_166805506_166805605	1.14666	Bhlhe40	ENSMUST00000099078.3|Arfgef2|ENSMUSG00000074582.4|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)
mm10_v2_chr12_+_86947343_86947430	1.08218	Bhlhe40	ENSMUST00000038369.4|2310044G17Rik|ENSMUSG00000034157.6|RIKEN cDNA 2310044G17 gene
mm10_v2_chr4_-_137048695_137048807	1.07626	Bhlhe40	ENSMUST00000049583.7|Zbtb40|ENSMUSG00000060862.9|zinc finger and BTB domain containing 40
mm10_v2_chr5_-_123572976_123573031	1.05366	Bhlhe40	ENSMUST00000031388.8|Vps33a|ENSMUSG00000029434.8|vacuolar protein sorting 33A (yeast)
mm10_v2_chr11_+_55204319_55204386	1.02921	Bhlhe40	ENSMUST00000108872.2|Slc36a1|ENSMUSG00000020261.9|solute carrier family 36 (proton/amino acid symporter), member 1 	ENSMUST00000147506.1|Slc36a1|ENSMUSG00000020261.9|solute carrier family 36 (proton/amino acid symporter), member 1 	ENSMUST00000020499.7|Slc36a1|ENSMUSG00000020261.9|solute carrier family 36 (proton/amino acid symporter), member 1
mm10_v2_chr2_-_30286312_30286354	1.02572	Bhlhe40	ENSMUST00000100219.3|Dolk|ENSMUSG00000075419.3|dolichol kinase
mm10_v2_chr7_-_90475971_90476003	0.972122	Bhlhe40	ENSMUST00000032843.7|Tmem126b|ENSMUSG00000030614.7|transmembrane protein 126B
mm10_v2_chr4_+_148039035_148039087	0.966524	Bhlhe40	ENSMUST00000097788.4|Mthfr|ENSMUSG00000029009.11|5,10-methylenetetrahydrofolate reductase
mm10_v2_chr12_-_3426700_3426782	0.965666	Bhlhe40	ENSMUST00000180149.1|1110002L01Rik|ENSMUSG00000071456.2|RIKEN cDNA 1110002L01 gene
mm10_v2_chr16_-_44139003_44139026	0.931858	Bhlhe40	ENSMUST00000124102.1|Atp6v1a|ENSMUSG00000052459.7|ATPase, H+ transporting, lysosomal V1 subunit A
mm10_v2_chr17_+_70561739_70561787	0.898643	Bhlhe40	ENSMUST00000097288.2|Dlgap1|ENSMUSG00000003279.10|discs, large (Drosophila) homolog-associated protein 1
mm10_v2_chr17_-_12769605_12769700	0.898051	Bhlhe40	ENSMUST00000024599.7|Igf2r|ENSMUSG00000023830.7|insulin-like growth factor 2 receptor
mm10_v2_chr4_-_141790891_141790931	0.880195	Bhlhe40	ENSMUST00000038014.4|Dnajc16|ENSMUSG00000040697.4|DnaJ (Hsp40) homolog, subfamily C, member 16 	ENSMUST00000153880.1|Dnajc16|ENSMUSG00000040697.4|DnaJ (Hsp40) homolog, subfamily C, member 16
mm10_v2_chr7_+_128744870_128745020	0.869467	Bhlhe40	ENSMUST00000042942.8|Sec23ip|ENSMUSG00000055319.7|Sec23 interacting protein
mm10_v2_chr4_-_48473403_48473459	0.846361	Bhlhe40	ENSMUST00000164866.1|Tex10|ENSMUSG00000028345.9|testis expressed gene 10 	ENSMUST00000030030.8|Tex10|ENSMUSG00000028345.9|testis expressed gene 10
mm10_v2_chr8_+_85037151_85037210	0.781266	Bhlhe40	ENSMUST00000166592.1|Tnpo2|ENSMUSG00000031691.7|transportin 2 (importin 3, karyopherin beta 2b)
mm10_v2_chr4_+_148039097_148039190	0.777994	Bhlhe40	ENSMUST00000141283.1|Mthfr|ENSMUSG00000029009.11|5,10-methylenetetrahydrofolate reductase
mm10_v2_chr8_-_84846860_84846934	0.770881	Bhlhe40	ENSMUST00000003912.6|Calr|ENSMUSG00000003814.8|calreticulin
mm10_v2_chr8_+_85036906_85036925	0.730942	Bhlhe40	ENSMUST00000093360.4|Tnpo2|ENSMUSG00000031691.7|transportin 2 (importin 3, karyopherin beta 2b)
mm10_v2_chr12_-_84450944_84451018	0.700127	Bhlhe40	ENSMUST00000085192.5|Aldh6a1|ENSMUSG00000021238.10|aldehyde dehydrogenase family 6, subfamily A1
mm10_v2_chr6_+_72097561_72097630	0.689205	Bhlhe40	ENSMUST00000069994.4|St3gal5|ENSMUSG00000056091.6|ST3 beta-galactoside alpha-2,3-sialyltransferase 5 	ENSMUST00000114112.1|St3gal5|ENSMUSG00000056091.6|ST3 beta-galactoside alpha-2,3-sialyltransferase 5
mm10_v2_chr2_+_30286406_30286442	0.664403	Bhlhe40	ENSMUST00000138666.1|Nup188|ENSMUSG00000052533.8|nucleoporin 188 	ENSMUST00000113634.2|Nup188|ENSMUSG00000052533.8|nucleoporin 188
mm10_v2_chrX_-_152327430_152327495	0.65525	Bhlhe40	ENSMUST00000181635.1|2900056M20Rik|ENSMUSG00000087403.2|RIKEN cDNA 2900056M20 gene 	ENSMUST00000141922.1|2900056M20Rik|ENSMUSG00000087403.2|RIKEN cDNA 2900056M20 gene 	ENSMUST00000154085.1|2900056M20Rik|ENSMUSG00000087403.2|RIKEN cDNA 2900056M20 gene 	ENSMUST00000148326.1|2900056M20Rik|ENSMUSG00000087403.2|RIKEN cDNA 2900056M20 gene 	ENSMUST00000135115.1|2900056M20Rik|ENSMUSG00000087403.2|RIKEN cDNA 2900056M20 gene 	ENSMUST00000149098.1|2900056M20Rik|ENSMUSG00000087403.2|RIKEN cDNA 2900056M20 gene
mm10_v2_chr11_+_97450136_97450180	0.630423	Bhlhe40	ENSMUST00000107601.1|Arhgap23|ENSMUSG00000049807.10|Rho GTPase activating protein 23
mm10_v2_chr2_-_37703845_37703885	0.610294	Bhlhe40	ENSMUST00000155237.1|Strbp|ENSMUSG00000026915.10|spermatid perinuclear RNA binding protein
mm10_v2_chr18_-_20896078_20896078	0.604664	Bhlhe40	ENSMUST00000025177.6|Trappc8|ENSMUSG00000033382.7|trafficking protein particle complex 8 	ENSMUST00000097658.1|Trappc8|ENSMUSG00000033382.7|trafficking protein particle complex 8
mm10_v2_chr3_-_107333289_107333289	0.589508	Bhlhe40	ENSMUST00000061772.9|Rbm15|ENSMUSG00000048109.9|RNA binding motif protein 15
mm10_v2_chr2_+_30286383_30286397	0.583571	Bhlhe40	ENSMUST00000064447.5|Nup188|ENSMUSG00000052533.8|nucleoporin 188
mm10_v2_chr11_-_75348261_75348324	0.583515	Bhlhe40	ENSMUST00000000767.5|Rpa1|ENSMUSG00000000751.7|replication protein A1 	ENSMUST00000092907.5|Rpa1|ENSMUSG00000000751.7|replication protein A1
mm10_v2_chr3_+_96727611_96727620	0.575017	Bhlhe40	ENSMUST00000029740.9|Rnf115|ENSMUSG00000028098.9|ring finger protein 115
mm10_v2_chr16_-_44139630_44139766	0.565451	Bhlhe40	ENSMUST00000137557.1|Atp6v1a|ENSMUSG00000052459.7|ATPase, H+ transporting, lysosomal V1 subunit A 	ENSMUST00000147025.1|Atp6v1a|ENSMUSG00000052459.7|ATPase, H+ transporting, lysosomal V1 subunit A
mm10_v2_chr3_-_10440054_10440127	0.504681	Bhlhe40	ENSMUST00000099223.4|Snx16|ENSMUSG00000027534.10|sorting nexin 16 	ENSMUST00000029047.6|Snx16|ENSMUSG00000027534.10|sorting nexin 16
mm10_v2_chr11_+_75348433_75348560	0.491766	Bhlhe40	ENSMUST00000044530.2|Smyd4|ENSMUSG00000018809.2|SET and MYND domain containing 4
mm10_v2_chr11_-_75454656_75454721	0.46873	Bhlhe40	ENSMUST00000173320.1|Wdr81|ENSMUSG00000045374.12|WD repeat domain 81
mm10_v2_chrX_-_136203637_136203926	0.426622	Bhlhe40	ENSMUST00000151592.1|Tceal5|ENSMUSG00000054034.4|transcription elongation factor A (SII)-like 5 	ENSMUST00000131510.1|Tceal5|ENSMUSG00000054034.4|transcription elongation factor A (SII)-like 5 	ENSMUST00000066819.4|Tceal5|ENSMUSG00000054034.4|transcription elongation factor A (SII)-like 5
mm10_v2_chr18_+_31609512_31609512	0.382807	Bhlhe40	ENSMUST00000164667.1|B930094E09Rik|ENSMUSG00000092124.1|RIKEN cDNA B930094E09 gene
mm10_v2_chr7_+_82648595_82648653	0.349732	Bhlhe40	ENSMUST00000141726.1|Eftud1|ENSMUSG00000038563.7|elongation factor Tu GTP binding domain containing 1 	ENSMUST00000179489.1|Eftud1|ENSMUSG00000038563.7|elongation factor Tu GTP binding domain containing 1 	ENSMUST00000039881.3|Eftud1|ENSMUSG00000038563.7|elongation factor Tu GTP binding domain containing 1
mm10_v2_chr10_-_18023229_18023265	0.346594	Bhlhe40	ENSMUST00000020002.7|Abracl|ENSMUSG00000078453.2|ABRA C-terminal like
mm10_v2_chr16_+_5050012_5050122	0.341092	Bhlhe40	ENSMUST00000052449.5|Ubn1|ENSMUSG00000039473.7|ubinuclein 1
mm10_v2_chr6_-_35133731_35133742	0.328366	Bhlhe40	ENSMUST00000114993.2|Cnot4|ENSMUSG00000038784.7|CCR4-NOT transcription complex, subunit 4 	ENSMUST00000114989.2|Cnot4|ENSMUSG00000038784.7|CCR4-NOT transcription complex, subunit 4 	ENSMUST00000044163.6|Cnot4|ENSMUSG00000038784.7|CCR4-NOT transcription complex, subunit 4
mm10_v2_chrX_+_134601271_134601286	0.323808	Bhlhe40	ENSMUST00000050331.6|Hnrnph2|ENSMUSG00000045427.7|heterogeneous nuclear ribonucleoprotein H2 	ENSMUST00000059297.5|Hnrnph2|ENSMUSG00000045427.7|heterogeneous nuclear ribonucleoprotein H2
mm10_v2_chr16_+_5233615_5233653	0.315793	Bhlhe40	ENSMUST00000100196.2|Alg1|ENSMUSG00000039427.8|asparagine-linked glycosylation 1 (beta-1,4-mannosyltransferase) 	ENSMUST00000049207.8|Alg1|ENSMUSG00000039427.8|asparagine-linked glycosylation 1 (beta-1,4-mannosyltransferase)
mm10_v2_chr18_-_31609893_31609927	0.312575	Bhlhe40	ENSMUST00000060396.6|Slc25a46|ENSMUSG00000024259.8|solute carrier family 25, member 46
mm10_v2_chr15_+_80255184_80255263	0.299838	Bhlhe40	ENSMUST00000109605.3|Atf4|ENSMUSG00000042406.7|activating transcription factor 4
mm10_v2_chr3_-_95106779_95106897	0.289255	Bhlhe40	ENSMUST00000005768.7|Pip5k1a|ENSMUSG00000028126.10|phosphatidylinositol-4-phosphate 5-kinase, type 1 alpha 	ENSMUST00000107232.2|Pip5k1a|ENSMUSG00000028126.10|phosphatidylinositol-4-phosphate 5-kinase, type 1 alpha 	ENSMUST00000107236.2|Pip5k1a|ENSMUSG00000028126.10|phosphatidylinositol-4-phosphate 5-kinase, type 1 alpha
mm10_v2_chr1_+_5083105_5083173	0.287524	Bhlhe40	ENSMUST00000044369.7|Atp6v1h|ENSMUSG00000033793.7|ATPase, H+ transporting, lysosomal V1 subunit H
mm10_v2_chr3_-_95106907_95106930	0.283331	Bhlhe40	ENSMUST00000107233.2|Pip5k1a|ENSMUSG00000028126.10|phosphatidylinositol-4-phosphate 5-kinase, type 1 alpha
mm10_v2_chr8_+_25601591_25601607	0.282633	Bhlhe40	ENSMUST00000155861.1|Whsc1l1|ENSMUSG00000054823.9|Wolf-Hirschhorn syndrome candidate 1-like 1 (human)
mm10_v2_chr19_-_7241216_7241226	0.245954	Bhlhe40	ENSMUST00000025675.9|Naa40|ENSMUSG00000024764.9|N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae)
mm10_v2_chr1_+_155158703_155158776	0.24547	Bhlhe40	ENSMUST00000027743.7|Stx6|ENSMUSG00000026470.9|syntaxin 6
mm10_v2_chr5_-_137533170_137533204	0.228453	Bhlhe40	ENSMUST00000168746.1|Gnb2|ENSMUSG00000029713.9|guanine nucleotide binding protein (G protein), beta 2 	ENSMUST00000170293.1|Gnb2|ENSMUSG00000029713.9|guanine nucleotide binding protein (G protein), beta 2
mm10_v2_chr19_-_4201591_4201623	0.224699	Bhlhe40	ENSMUST00000025740.6|Rad9a|ENSMUSG00000024824.6|RAD9 homolog A
mm10_v2_chrX_+_153832225_153832293	0.219203	Bhlhe40	ENSMUST00000148708.1|Spin2c|ENSMUSG00000046550.8|spindlin family, member 2C 	ENSMUST00000123264.1|Spin2c|ENSMUSG00000046550.8|spindlin family, member 2C 	ENSMUST00000049999.8|Spin2c|ENSMUSG00000046550.8|spindlin family, member 2C
mm10_v2_chr19_-_33392255_33392300	0.214162	Bhlhe40	ENSMUST00000096114.5|Rnls|ENSMUSG00000071573.7|renalase, FAD-dependent amine oxidase 	ENSMUST00000163093.1|Rnls|ENSMUSG00000071573.7|renalase, FAD-dependent amine oxidase
mm10_v2_chr1_-_75219245_75219262	0.213819	Bhlhe40	ENSMUST00000079464.6|Tuba4a|ENSMUSG00000026202.7|tubulin, alpha 4A
mm10_v2_chr3_-_90052463_90052521	0.208692	Bhlhe40	ENSMUST00000029553.9|Ubap2l|ENSMUSG00000042520.10|ubiquitin associated protein 2-like 	ENSMUST00000064639.8|Ubap2l|ENSMUSG00000042520.10|ubiquitin associated protein 2-like 	ENSMUST00000090908.6|Ubap2l|ENSMUSG00000042520.10|ubiquitin associated protein 2-like
mm10_v2_chr5_+_104046869_104046899	0.196453	Bhlhe40	ENSMUST00000031250.7|Nudt9|ENSMUSG00000029310.7|nudix (nucleoside diphosphate linked moiety X)-type motif 9
mm10_v2_chr16_-_44139196_44139305	0.195517	Bhlhe40	ENSMUST00000063661.6|Atp6v1a|ENSMUSG00000052459.7|ATPase, H+ transporting, lysosomal V1 subunit A 	ENSMUST00000114666.2|Atp6v1a|ENSMUSG00000052459.7|ATPase, H+ transporting, lysosomal V1 subunit A
mm10_v2_chrX_+_134601179_134601266	0.193469	Bhlhe40	ENSMUST00000074950.4|Hnrnph2|ENSMUSG00000045427.7|heterogeneous nuclear ribonucleoprotein H2 	ENSMUST00000113203.1|Hnrnph2|ENSMUSG00000045427.7|heterogeneous nuclear ribonucleoprotein H2 	ENSMUST00000113202.1|Hnrnph2|ENSMUSG00000045427.7|heterogeneous nuclear ribonucleoprotein H2
mm10_v2_chr1_+_166254095_166254156	0.192304	Bhlhe40	ENSMUST00000111416.1|Ildr2|ENSMUSG00000040612.8|immunoglobulin-like domain containing receptor 2
mm10_v2_chr10_+_41519493_41519516	0.181987	Bhlhe40	ENSMUST00000019962.8|Cd164|ENSMUSG00000019818.9|CD164 antigen
mm10_v2_chr3_+_89202916_89202962	0.176936	Bhlhe40	ENSMUST00000077367.4|Gba|ENSMUSG00000028048.5|glucosidase, beta, acid 	ENSMUST00000167998.1|Gba|ENSMUSG00000028048.5|glucosidase, beta, acid
mm10_v2_chr5_-_72168142_72168199	0.115918	Bhlhe40	ENSMUST00000013693.6|Commd8|ENSMUSG00000029213.7|COMM domain containing 8
mm10_v2_chr11_+_3649494_3649494	0.104723	Bhlhe40	ENSMUST00000093389.2|Morc2a|ENSMUSG00000034543.8|microrchidia 2A
mm10_v2_chr2_-_37422869_37422958	0.103844	Bhlhe40	ENSMUST00000112936.1|Rc3h2|ENSMUSG00000075376.4|ring finger and CCCH-type zinc finger domains 2 	ENSMUST00000112934.1|Rc3h2|ENSMUSG00000075376.4|ring finger and CCCH-type zinc finger domains 2
mm10_v2_chr8_+_111033890_111033932	0.101387	Bhlhe40	ENSMUST00000034441.7|Aars|ENSMUSG00000031960.8|alanyl-tRNA synthetase
mm10_v2_chrX_+_136138996_136139053	0.0744072	Bhlhe40	ENSMUST00000116527.1|Bex4|ENSMUSG00000047844.3|brain expressed gene 4
mm10_v2_chr3_-_96727566_96727628	0.072303	Bhlhe40	ENSMUST00000029741.2|Polr3c|ENSMUSG00000028099.2|polymerase (RNA) III (DNA directed) polypeptide C
mm10_v2_chr17_+_33824591_33824644	0.0709987	Bhlhe40	ENSMUST00000048249.6|Ndufa7|ENSMUSG00000041881.6|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 7 (B14.5a)
mm10_v2_chr13_-_48625571_48625594	0.0683023	Bhlhe40	ENSMUST00000035824.9|Ptpdc1|ENSMUSG00000038042.9|protein tyrosine phosphatase domain containing 1
mm10_v2_chr14_+_26579535_26579612	0.0655523	Bhlhe40	ENSMUST00000037585.7|Dennd6a|ENSMUSG00000040818.7|DENN/MADD domain containing 6A
mm10_v2_chr19_-_60790692_60790700	0.0643954	Bhlhe40	ENSMUST00000025955.6|Eif3a|ENSMUSG00000024991.7|eukaryotic translation initiation factor 3, subunit A
mm10_v2_chr3_-_96727436_96727452	0.0607755	Bhlhe40	ENSMUST00000154679.1|Polr3c|ENSMUSG00000028099.2|polymerase (RNA) III (DNA directed) polypeptide C
mm10_v2_chr5_-_137533212_137533290	0.0576422	Bhlhe40	ENSMUST00000143495.1|Gnb2|ENSMUSG00000029713.9|guanine nucleotide binding protein (G protein), beta 2 	ENSMUST00000111038.1|Epo|ENSMUSG00000029711.7|erythropoietin
mm10_v2_chr16_-_92466081_92466187	0.0354627	Bhlhe40	ENSMUST00000060005.8|Rcan1|ENSMUSG00000022951.9|regulator of calcineurin 1
mm10_v2_chr3_-_96727453_96727505	0.0343764	Bhlhe40	ENSMUST00000141377.1|Polr3c|ENSMUSG00000028099.2|polymerase (RNA) III (DNA directed) polypeptide C 	ENSMUST00000125183.1|Polr3c|ENSMUSG00000028099.2|polymerase (RNA) III (DNA directed) polypeptide C
mm10_v2_chr12_-_91590009_91590056	0.0231677	Bhlhe40	ENSMUST00000021345.6|Gtf2a1|ENSMUSG00000020962.7|general transcription factor II A, 1
mm10_v2_chr11_-_117780630_117780688	0.0200163	Bhlhe40	ENSMUST00000026659.3|Tmc6|ENSMUSG00000025572.11|transmembrane channel-like gene family 6 	ENSMUST00000127227.1|Tmc6|ENSMUSG00000025572.11|transmembrane channel-like gene family 6
