mm10_v2_chr7_-_42706369_42706369	0.986007	Crx_Gsc	ENSMUST00000180131.1|Gm17067|ENSMUSG00000095144.1|predicted gene 17067
mm10_v2_chrY_+_1010543_1010613	0.970858	Crx_Gsc	ENSMUST00000091197.3|Eif2s3y|ENSMUSG00000069049.5|eukaryotic translation initiation factor 2, subunit 3, structural gene Y-linked
mm10_v2_chr1_-_52490736_52490736	0.51857	Crx_Gsc	ENSMUST00000170269.1|Nab1|ENSMUSG00000002881.8|Ngfi-A binding protein 1
mm10_v2_chr1_+_178187721_178187847	0.512176	Crx_Gsc	ENSMUST00000159284.1|Desi2|ENSMUSG00000026502.7|desumoylating isopeptidase 2
mm10_v2_chr1_-_154725920_154725920	0.489745	Crx_Gsc	ENSMUST00000004214.8|Cacna1e|ENSMUSG00000004110.8|calcium channel, voltage-dependent, R type, alpha 1E subunit
mm10_v2_chr1_+_109983006_109983006	0.448114	Crx_Gsc	ENSMUST00000145188.1|Cdh7|ENSMUSG00000026312.11|cadherin 7, type 2
mm10_v2_chr4_+_74013442_74013674	0.44141	Crx_Gsc	ENSMUST00000098006.2|Frmd3|ENSMUSG00000049122.11|FERM domain containing 3 	ENSMUST00000084474.5|Frmd3|ENSMUSG00000049122.11|FERM domain containing 3
mm10_v2_chr11_-_70459957_70459984	0.409892	Crx_Gsc	ENSMUST00000019064.2|Cxcl16|ENSMUSG00000018920.5|chemokine (C-X-C motif) ligand 16
mm10_v2_chr13_-_66227573_66227573	0.395595	Crx_Gsc	ENSMUST00000167981.2|Gm10772|ENSMUSG00000091347.2|predicted gene 10772
mm10_v2_chr11_+_70459940_70460137	0.38835	Crx_Gsc	ENSMUST00000147289.1|Zmynd15|ENSMUSG00000040829.8|zinc finger, MYND-type containing 15 	ENSMUST00000126105.1|Zmynd15|ENSMUSG00000040829.8|zinc finger, MYND-type containing 15
mm10_v2_chr5_+_77265454_77265549	0.36266	Crx_Gsc	ENSMUST00000080359.5|Rest|ENSMUSG00000029249.9|RE1-silencing transcription factor
mm10_v2_chr1_-_155417394_155417435	0.35727	Crx_Gsc	ENSMUST00000111775.1|Xpr1|ENSMUSG00000026469.8|xenotropic and polytropic retrovirus receptor 1 	ENSMUST00000111774.1|Xpr1|ENSMUSG00000026469.8|xenotropic and polytropic retrovirus receptor 1
mm10_v2_chr13_+_110395041_110395057	0.315767	Crx_Gsc	ENSMUST00000022212.7|Plk2|ENSMUSG00000021701.7|polo-like kinase 2
mm10_v2_chr7_-_134938264_134938430	0.289189	Crx_Gsc	ENSMUST00000171394.1|Fam196a|ENSMUSG00000073805.4|family with sequence similarity 196, member A
mm10_v2_chr5_-_74068361_74068438	0.28221	Crx_Gsc	ENSMUST00000119154.1|Usp46|ENSMUSG00000054814.8|ubiquitin specific peptidase 46 	ENSMUST00000068058.7|Usp46|ENSMUSG00000054814.8|ubiquitin specific peptidase 46
mm10_v2_chr1_-_126738167_126738230	0.276724	Crx_Gsc	ENSMUST00000160693.1|Nckap5|ENSMUSG00000049690.9|NCK-associated protein 5
mm10_v2_chr16_+_23290464_23290534	0.273159	Crx_Gsc	ENSMUST00000115335.1|St6gal1|ENSMUSG00000022885.9|beta galactoside alpha 2,6 sialyltransferase 1
mm10_v2_chr14_-_19977040_19977059	0.272324	Crx_Gsc	ENSMUST00000159028.1|Gng2|ENSMUSG00000043004.7|guanine nucleotide binding protein (G protein), gamma 2
mm10_v2_chr10_+_90576872_90576992	0.272207	Crx_Gsc	ENSMUST00000182550.1|Anks1b|ENSMUSG00000058589.8|ankyrin repeat and sterile alpha motif domain containing 1B 	ENSMUST00000099364.5|Anks1b|ENSMUSG00000058589.8|ankyrin repeat and sterile alpha motif domain containing 1B
mm10_v2_chr5_-_112589990_112590002	0.272025	Crx_Gsc	ENSMUST00000183186.1|1700034G24Rik|ENSMUSG00000097962.1|RIKEN cDNA 1700034G24 gene 	ENSMUST00000182949.1|1700034G24Rik|ENSMUSG00000097962.1|RIKEN cDNA 1700034G24 gene
mm10_v2_chr2_+_65845833_65845850	0.252927	Crx_Gsc	ENSMUST00000053910.3|Csrnp3|ENSMUSG00000044647.10|cysteine-serine-rich nuclear protein 3
mm10_v2_chr6_-_59426279_59426345	0.248251	Crx_Gsc	ENSMUST00000051065.4|Gprin3|ENSMUSG00000045441.4|GPRIN family member 3
mm10_v2_chrX_+_74424632_74424671	0.243403	Crx_Gsc	ENSMUST00000114129.2|Ikbkg|ENSMUSG00000004221.10|inhibitor of kappaB kinase gamma 	ENSMUST00000132749.1|Ikbkg|ENSMUSG00000004221.10|inhibitor of kappaB kinase gamma
mm10_v2_chr1_+_85575676_85575676	0.239184	Crx_Gsc	ENSMUST00000178024.1|G530012D18Rik|ENSMUSG00000094127.1|RIKEN cDNA G530012D1 gene
mm10_v2_chr14_-_19977249_19977253	0.234442	Crx_Gsc	ENSMUST00000160013.1|Gng2|ENSMUSG00000043004.7|guanine nucleotide binding protein (G protein), gamma 2
mm10_v2_chr14_-_19977151_19977204	0.224697	Crx_Gsc	ENSMUST00000055100.7|Gng2|ENSMUSG00000043004.7|guanine nucleotide binding protein (G protein), gamma 2 	ENSMUST00000162425.1|Gng2|ENSMUSG00000043004.7|guanine nucleotide binding protein (G protein), gamma 2
mm10_v2_chr13_+_108046411_108046424	0.221144	Crx_Gsc	ENSMUST00000095458.4|Smim15|ENSMUSG00000071180.4|small integral membrane protein 15
mm10_v2_chr9_+_109051090_109051104	0.221088	Crx_Gsc	ENSMUST00000059097.8|Shisa5|ENSMUSG00000025647.10|shisa homolog 5 (Xenopus laevis)
mm10_v2_chr1_-_155417283_155417323	0.210287	Crx_Gsc	ENSMUST00000027741.5|Xpr1|ENSMUSG00000026469.8|xenotropic and polytropic retrovirus receptor 1
mm10_v2_chr4_-_138913915_138913983	0.198954	Crx_Gsc	ENSMUST00000097830.3|Otud3|ENSMUSG00000041161.8|OTU domain containing 3
mm10_v2_chr13_-_8858762_8858829	0.193611	Crx_Gsc	ENSMUST00000176329.1|Wdr37|ENSMUSG00000021147.10|WD repeat domain 37
mm10_v2_chr1_-_13660476_13660554	0.186548	Crx_Gsc	ENSMUST00000027071.5|Lactb2|ENSMUSG00000025937.5|lactamase, beta 2
mm10_v2_chr1_-_119648903_119649000	0.186045	Crx_Gsc	ENSMUST00000163147.1|Epb4.1l5|ENSMUSG00000026383.8|erythrocyte protein band 4.1-like 5 	ENSMUST00000052404.6|Epb4.1l5|ENSMUSG00000026383.8|erythrocyte protein band 4.1-like 5 	ENSMUST00000027632.7|Epb4.1l5|ENSMUSG00000026383.8|erythrocyte protein band 4.1-like 5
mm10_v2_chr11_+_6658510_6658574	0.185759	Crx_Gsc	ENSMUST00000045374.7|Ramp3|ENSMUSG00000041046.7|receptor (calcitonin) activity modifying protein 3
mm10_v2_chr5_+_143758293_143758363	0.184074	Crx_Gsc	ENSMUST00000180951.1|D130017N08Rik|ENSMUSG00000097287.1|RIKEN cDNA D130017N08 gene
mm10_v2_chr17_+_47385386_47385404	0.182314	Crx_Gsc	ENSMUST00000024774.7|Guca1b|ENSMUSG00000023979.8|guanylate cyclase activator 1B 	ENSMUST00000145462.1|Guca1b|ENSMUSG00000023979.8|guanylate cyclase activator 1B
mm10_v2_chr14_-_63543931_63543991	0.180301	Crx_Gsc	ENSMUST00000058679.5|Mtmr9|ENSMUSG00000035078.5|myotubularin related protein 9
mm10_v2_chr7_+_7171330_7171373	0.178658	Crx_Gsc	ENSMUST00000051435.7|Zfp418|ENSMUSG00000034538.7|zinc finger protein 418
mm10_v2_chr11_-_100472725_100472759	0.177269	Crx_Gsc	ENSMUST00000056665.3|Klhl11|ENSMUSG00000048732.5|kelch-like 11
mm10_v2_chr9_-_53975246_53975348	0.176941	Crx_Gsc	ENSMUST00000048409.7|Elmod1|ENSMUSG00000041986.9|ELMO/CED-12 domain containing 1
mm10_v2_chr9_+_87144285_87144343	0.176577	Crx_Gsc	ENSMUST00000113149.1|Mrap2|ENSMUSG00000042761.8|melanocortin 2 receptor accessory protein 2 	ENSMUST00000143779.1|Mrap2|ENSMUSG00000042761.8|melanocortin 2 receptor accessory protein 2 	ENSMUST00000179313.1|Mrap2|ENSMUSG00000042761.8|melanocortin 2 receptor accessory protein 2 	ENSMUST00000049457.7|Mrap2|ENSMUSG00000042761.8|melanocortin 2 receptor accessory protein 2 	ENSMUST00000153444.1|Mrap2|ENSMUSG00000042761.8|melanocortin 2 receptor accessory protein 2
mm10_v2_chrX_+_74424534_74424629	0.175839	Crx_Gsc	ENSMUST00000135165.1|Ikbkg|ENSMUSG00000004221.10|inhibitor of kappaB kinase gamma 	ENSMUST00000114128.1|Ikbkg|ENSMUSG00000004221.10|inhibitor of kappaB kinase gamma 	ENSMUST00000114133.2|Ikbkg|ENSMUSG00000004221.10|inhibitor of kappaB kinase gamma 	ENSMUST00000004330.3|Ikbkg|ENSMUSG00000004221.10|inhibitor of kappaB kinase gamma
mm10_v2_chr19_+_43689672_43689695	0.175346	Crx_Gsc	ENSMUST00000081079.5|Entpd7|ENSMUSG00000025192.7|ectonucleoside triphosphate diphosphohydrolase 7
mm10_v2_chr7_+_44384604_44384674	0.173099	Crx_Gsc	ENSMUST00000130707.1|Syt3|ENSMUSG00000030731.7|synaptotagmin III 	ENSMUST00000130844.1|Syt3|ENSMUSG00000030731.7|synaptotagmin III
mm10_v2_chr16_-_46010212_46010223	0.172077	Crx_Gsc	ENSMUST00000130481.1|Plcxd2|ENSMUSG00000087141.1|phosphatidylinositol-specific phospholipase C, X domain containing 2
mm10_v2_chr2_+_172550991_172551043	0.171475	Crx_Gsc	ENSMUST00000170744.1|Tfap2c|ENSMUSG00000028640.5|transcription factor AP-2, gamma
mm10_v2_chr11_-_109722214_109722289	0.171467	Crx_Gsc	ENSMUST00000020938.7|Fam20a|ENSMUSG00000020614.7|family with sequence similarity 20, member A
mm10_v2_chr9_-_95750335_95750368	0.171276	Crx_Gsc	ENSMUST00000053785.3|Trpc1|ENSMUSG00000032839.7|transient receptor potential cation channel, subfamily C, member 1
mm10_v2_chr11_+_96464587_96464637	0.171175	Crx_Gsc	ENSMUST00000103154.4|Skap1|ENSMUSG00000057058.10|src family associated phosphoprotein 1 	ENSMUST00000100521.3|Skap1|ENSMUSG00000057058.10|src family associated phosphoprotein 1 	ENSMUST00000100519.4|Skap1|ENSMUSG00000057058.10|src family associated phosphoprotein 1 	ENSMUST00000071510.7|Skap1|ENSMUSG00000057058.10|src family associated phosphoprotein 1 	ENSMUST00000107662.2|Skap1|ENSMUSG00000057058.10|src family associated phosphoprotein 1
mm10_v2_chr6_+_58831748_58831898	0.167574	Crx_Gsc	ENSMUST00000126292.1|Herc3|ENSMUSG00000029804.10|hect domain and RLD 3 	ENSMUST00000031823.5|Herc3|ENSMUSG00000029804.10|hect domain and RLD 3
mm10_v2_chr8_-_54724474_54724504	0.161367	Crx_Gsc	ENSMUST00000175915.1|Wdr17|ENSMUSG00000039375.10|WD repeat domain 17
mm10_v2_chr16_+_52031549_52031570	0.159833	Crx_Gsc	ENSMUST00000114471.1|Cblb|ENSMUSG00000022637.10|Casitas B-lineage lymphoma b
mm10_v2_chr10_-_77969804_77969854	0.154497	Crx_Gsc	ENSMUST00000105399.1|Trpm2|ENSMUSG00000009292.11|transient receptor potential cation channel, subfamily M, member 2 	ENSMUST00000105401.2|Trpm2|ENSMUSG00000009292.11|transient receptor potential cation channel, subfamily M, member 2
mm10_v2_chr7_-_143074561_143074561	0.153706	Crx_Gsc	ENSMUST00000148715.1|Trpm5|ENSMUSG00000009246.8|transient receptor potential cation channel, subfamily M, member 5
mm10_v2_chr1_+_55131253_55131302	0.152543	Crx_Gsc	ENSMUST00000027122.7|Mob4|ENSMUSG00000025979.7|MOB family member 4, phocein
mm10_v2_chr11_+_67966442_67966497	0.150142	Crx_Gsc	ENSMUST00000021286.4|Stx8|ENSMUSG00000020903.7|syntaxin 8 	ENSMUST00000108675.1|Stx8|ENSMUSG00000020903.7|syntaxin 8
mm10_v2_chr4_-_143212691_143212728	0.149203	Crx_Gsc	ENSMUST00000105778.1|Prdm2|ENSMUSG00000057637.7|PR domain containing 2, with ZNF domain 	ENSMUST00000134791.1|Prdm2|ENSMUSG00000057637.7|PR domain containing 2, with ZNF domain
mm10_v2_chr19_+_26605106_26605119	0.146199	Crx_Gsc	ENSMUST00000025862.7|Smarca2|ENSMUSG00000024921.10|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 	ENSMUST00000176030.1|Smarca2|ENSMUSG00000024921.10|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
mm10_v2_chr5_-_121660477_121660519	0.144274	Crx_Gsc	ENSMUST00000031412.5|Acad10|ENSMUSG00000029456.6|acyl-Coenzyme A dehydrogenase family, member 10 	ENSMUST00000111770.1|Acad10|ENSMUSG00000029456.6|acyl-Coenzyme A dehydrogenase family, member 10
mm10_v2_chr8_-_54724317_54724388	0.142492	Crx_Gsc	ENSMUST00000129132.2|Wdr17|ENSMUSG00000039375.10|WD repeat domain 17 	ENSMUST00000150488.1|Wdr17|ENSMUSG00000039375.10|WD repeat domain 17 	ENSMUST00000127511.2|Wdr17|ENSMUSG00000039375.10|WD repeat domain 17
mm10_v2_chr6_+_38381469_38381528	0.141537	Crx_Gsc	ENSMUST00000162554.1|Ttc26|ENSMUSG00000056832.8|tetratricopeptide repeat domain 26 	ENSMUST00000161751.1|Ttc26|ENSMUSG00000056832.8|tetratricopeptide repeat domain 26
mm10_v2_chr16_-_63864114_63864182	0.141495	Crx_Gsc	ENSMUST00000064405.6|Epha3|ENSMUSG00000052504.6|Eph receptor A3
mm10_v2_chr14_+_61138445_61138495	0.139424	Crx_Gsc	ENSMUST00000089394.3|Sacs|ENSMUSG00000048279.11|sacsin 	ENSMUST00000119509.1|Sacs|ENSMUSG00000048279.11|sacsin
mm10_v2_chr3_-_89365233_89365253	0.138869	Crx_Gsc	ENSMUST00000070820.6|Dcst1|ENSMUSG00000042672.9|DC-STAMP domain containing 1
mm10_v2_chr3_+_135281221_135281299	0.138146	Crx_Gsc	ENSMUST00000120397.1|Bdh2|ENSMUSG00000028167.9|3-hydroxybutyrate dehydrogenase, type 2 	ENSMUST00000171974.1|Bdh2|ENSMUSG00000028167.9|3-hydroxybutyrate dehydrogenase, type 2 	ENSMUST00000029817.7|Bdh2|ENSMUSG00000028167.9|3-hydroxybutyrate dehydrogenase, type 2
mm10_v2_chr9_+_95954744_95954783	0.137227	Crx_Gsc	ENSMUST00000034981.7|Xrn1|ENSMUSG00000032410.7|5'-3' exoribonuclease 1
mm10_v2_chr18_+_23989632_23989694	0.135879	Crx_Gsc	ENSMUST00000074941.7|Zfp35|ENSMUSG00000063281.9|zinc finger protein 35
mm10_v2_chr14_-_87141206_87141239	0.13434	Crx_Gsc	ENSMUST00000022599.7|Diap3|ENSMUSG00000022021.7|diaphanous homolog 3 (Drosophila)
mm10_v2_chr17_-_28441718_28441732	0.134145	Crx_Gsc	ENSMUST00000153744.1|Fkbp5|ENSMUSG00000024222.10|FK506 binding protein 5
mm10_v2_chr19_-_43752924_43753001	0.129653	Crx_Gsc	ENSMUST00000045562.5|Cox15|ENSMUSG00000040018.9|cytochrome c oxidase assembly protein 15
mm10_v2_chr11_-_86257553_86257575	0.126664	Crx_Gsc	ENSMUST00000132024.1|Ints2|ENSMUSG00000018068.7|integrator complex subunit 2 	ENSMUST00000139285.1|Ints2|ENSMUSG00000018068.7|integrator complex subunit 2
mm10_v2_chr18_+_65581704_65581761	0.123234	Crx_Gsc	ENSMUST00000182979.1|Zfp532|ENSMUSG00000042439.6|zinc finger protein 532
mm10_v2_chr2_-_118547541_118547567	0.12244	Crx_Gsc	ENSMUST00000110859.2|Bmf|ENSMUSG00000040093.9|BCL2 modifying factor
mm10_v2_chr11_+_11115784_11115851	0.121897	Crx_Gsc	ENSMUST00000056344.4|Vwc2|ENSMUSG00000050830.11|von Willebrand factor C domain containing 2
mm10_v2_chr19_+_53140430_53140449	0.121063	Crx_Gsc	ENSMUST00000111741.2|Add3|ENSMUSG00000025026.8|adducin 3 (gamma)
mm10_v2_chr5_+_117120120_117120180	0.119665	Crx_Gsc	ENSMUST00000111978.1|Taok3|ENSMUSG00000061288.7|TAO kinase 3
mm10_v2_chr2_-_24763047_24763153	0.116858	Crx_Gsc	ENSMUST00000100348.3|Cacna1b|ENSMUSG00000004113.12|calcium channel, voltage-dependent, N type, alpha 1B subunit 	ENSMUST00000041342.5|Cacna1b|ENSMUSG00000004113.12|calcium channel, voltage-dependent, N type, alpha 1B subunit 	ENSMUST00000114447.1|Cacna1b|ENSMUSG00000004113.12|calcium channel, voltage-dependent, N type, alpha 1B subunit 	ENSMUST00000102939.2|Cacna1b|ENSMUSG00000004113.12|calcium channel, voltage-dependent, N type, alpha 1B subunit 	ENSMUST00000070864.7|Cacna1b|ENSMUSG00000004113.12|calcium channel, voltage-dependent, N type, alpha 1B subunit
mm10_v2_chr8_+_3393018_3393073	0.11518	Crx_Gsc	ENSMUST00000004684.6|Arhgef18|ENSMUSG00000004568.6|rho/rac guanine nucleotide exchange factor (GEF) 18 	ENSMUST00000145394.1|Arhgef18|ENSMUSG00000004568.6|rho/rac guanine nucleotide exchange factor (GEF) 18
mm10_v2_chr14_+_48446340_48446429	0.113373	Crx_Gsc	ENSMUST00000111735.2|Tmem260|ENSMUSG00000036339.11|transmembrane protein 260
mm10_v2_chr2_+_102659213_102659281	0.11319	Crx_Gsc	ENSMUST00000111213.1|Slc1a2|ENSMUSG00000005089.9|solute carrier family 1 (glial high affinity glutamate transporter), member 2
mm10_v2_chr12_+_101975965_101976004	0.110687	Crx_Gsc	ENSMUST00000047357.8|Cpsf2|ENSMUSG00000041781.8|cleavage and polyadenylation specific factor 2
mm10_v2_chr10_+_128267997_128267997	0.108451	Crx_Gsc	ENSMUST00000050901.2|Apof|ENSMUSG00000047631.2|apolipoprotein F
mm10_v2_chr4_-_40703154_40703187	0.108426	Crx_Gsc	ENSMUST00000108103.2|Aptx|ENSMUSG00000028411.9|aprataxin
mm10_v2_chr8_+_20136455_20136574	0.107011	Crx_Gsc	ENSMUST00000179299.1|Gm21811|ENSMUSG00000096401.1|predicted gene, 21811 	ENSMUST00000096485.4|Gm21811|ENSMUSG00000096401.1|predicted gene, 21811
mm10_v2_chr6_-_34977999_34977999	0.106957	Crx_Gsc	ENSMUST00000044387.7|2010107G12Rik|ENSMUSG00000029847.7|RIKEN cDNA 2010107G12 gene
mm10_v2_chr8_-_60954726_60954790	0.106865	Crx_Gsc	ENSMUST00000110302.1|Clcn3|ENSMUSG00000004319.9|chloride channel 3
mm10_v2_chr2_+_65845767_65845799	0.106667	Crx_Gsc	ENSMUST00000122912.1|Csrnp3|ENSMUSG00000044647.10|cysteine-serine-rich nuclear protein 3
mm10_v2_chr13_+_12395362_12395415	0.104038	Crx_Gsc	ENSMUST00000059270.8|Heatr1|ENSMUSG00000050244.8|HEAT repeat containing 1
mm10_v2_chr10_-_4432312_4432388	0.102535	Crx_Gsc	ENSMUST00000126102.1|Rmnd1|ENSMUSG00000019763.5|required for meiotic nuclear division 1 homolog (S. cerevisiae) 	ENSMUST00000131853.1|Rmnd1|ENSMUSG00000019763.5|required for meiotic nuclear division 1 homolog (S. cerevisiae) 	ENSMUST00000042251.4|Rmnd1|ENSMUSG00000019763.5|required for meiotic nuclear division 1 homolog (S. cerevisiae)
mm10_v2_chr11_-_115297510_115297519	0.102084	Crx_Gsc	ENSMUST00000056153.7|Fads6|ENSMUSG00000044788.10|fatty acid desaturase domain family, member 6
mm10_v2_chr11_-_68927049_68927101	0.101386	Crx_Gsc	ENSMUST00000038932.7|Odf4|ENSMUSG00000032921.7|outer dense fiber of sperm tails 4
mm10_v2_chr12_-_84400929_84400946	0.100479	Crx_Gsc	ENSMUST00000122194.1|Entpd5|ENSMUSG00000021236.10|ectonucleoside triphosphate diphosphohydrolase 5
mm10_v2_chr4_-_82859571_82859679	0.0995541	Crx_Gsc	ENSMUST00000156055.1|Zdhhc21|ENSMUSG00000028403.9|zinc finger, DHHC domain containing 21 	ENSMUST00000030110.8|Zdhhc21|ENSMUSG00000028403.9|zinc finger, DHHC domain containing 21
mm10_v2_chr4_-_40702893_40702937	0.0973578	Crx_Gsc	ENSMUST00000068125.4|Aptx|ENSMUSG00000028411.9|aprataxin
mm10_v2_chr6_-_149101506_149101589	0.0966304	Crx_Gsc	ENSMUST00000127727.1|Dennd5b|ENSMUSG00000030313.9|DENN/MADD domain containing 5B
mm10_v2_chrX_+_73483602_73483644	0.0960885	Crx_Gsc	ENSMUST00000033741.8|Bgn|ENSMUSG00000031375.11|biglycan 	ENSMUST00000169489.1|Bgn|ENSMUSG00000031375.11|biglycan
mm10_v2_chr1_-_121327672_121327690	0.095827	Crx_Gsc	ENSMUST00000159085.1|Insig2|ENSMUSG00000003721.8|insulin induced gene 2 	ENSMUST00000159125.1|Insig2|ENSMUSG00000003721.8|insulin induced gene 2 	ENSMUST00000161818.1|Insig2|ENSMUSG00000003721.8|insulin induced gene 2
mm10_v2_chr13_+_54789377_54789497	0.0956634	Crx_Gsc	ENSMUST00000026993.7|Tspan17|ENSMUSG00000025875.8|tetraspanin 17 	ENSMUST00000131692.2|Tspan17|ENSMUSG00000025875.8|tetraspanin 17 	ENSMUST00000163796.1|Tspan17|ENSMUSG00000025875.8|tetraspanin 17
mm10_v2_chr16_+_11405648_11405713	0.0931468	Crx_Gsc	ENSMUST00000096273.2|Snx29|ENSMUSG00000071669.8|sorting nexin 29
mm10_v2_chr2_+_181864337_181864438	0.092428	Crx_Gsc	ENSMUST00000039551.8|Polr3k|ENSMUSG00000038628.8|polymerase (RNA) III (DNA directed) polypeptide K
mm10_v2_chrX_-_75578188_75578247	0.0917706	Crx_Gsc	ENSMUST00000033545.5|Rab39b|ENSMUSG00000031202.5|RAB39B, member RAS oncogene family
mm10_v2_chr14_-_34503323_34503345	0.09083	Crx_Gsc	ENSMUST00000171343.1|Bmpr1a|ENSMUSG00000021796.8|bone morphogenetic protein receptor, type 1A
mm10_v2_chr7_-_103843154_103843169	0.0905548	Crx_Gsc	ENSMUST00000063957.4|Hbb-bh1|ENSMUSG00000052217.5|hemoglobin Z, beta-like embryonic chain
mm10_v2_chr3_-_63964768_63964785	0.0905262	Crx_Gsc	ENSMUST00000029402.8|Slc33a1|ENSMUSG00000027822.10|solute carrier family 33 (acetyl-CoA transporter), member 1
mm10_v2_chr19_+_5366764_5366851	0.0898848	Crx_Gsc	ENSMUST00000025759.7|Eif1ad|ENSMUSG00000024841.7|eukaryotic translation initiation factor 1A domain containing
mm10_v2_chr11_-_29247208_29247409	0.0898308	Crx_Gsc	ENSMUST00000020754.3|Ccdc104|ENSMUSG00000020462.8|coiled-coil domain containing 104
mm10_v2_chr10_-_39899238_39899238	0.0887253	Crx_Gsc	ENSMUST00000178563.1|AA474331|ENSMUSG00000096687.1|expressed sequence AA474331
mm10_v2_chr1_+_128244122_128244181	0.0878257	Crx_Gsc	ENSMUST00000027592.3|Ubxn4|ENSMUSG00000026353.3|UBX domain protein 4
mm10_v2_chr8_-_94838255_94838358	0.0876969	Crx_Gsc	ENSMUST00000161762.1|Ciapin1|ENSMUSG00000031781.7|cytokine induced apoptosis inhibitor 1 	ENSMUST00000162538.1|Ciapin1|ENSMUSG00000031781.7|cytokine induced apoptosis inhibitor 1
mm10_v2_chr3_+_28781305_28781344	0.0867956	Crx_Gsc	ENSMUST00000060500.7|Eif5a2|ENSMUSG00000050192.7|eukaryotic translation initiation factor 5A2
mm10_v2_chr15_-_64382908_64382936	0.0866471	Crx_Gsc	ENSMUST00000177374.1|Asap1|ENSMUSG00000022377.10|ArfGAP with SH3 domain, ankyrin repeat and PH domain1 	ENSMUST00000023008.9|Asap1|ENSMUSG00000022377.10|ArfGAP with SH3 domain, ankyrin repeat and PH domain1 	ENSMUST00000110115.2|Asap1|ENSMUSG00000022377.10|ArfGAP with SH3 domain, ankyrin repeat and PH domain1 	ENSMUST00000110114.3|Asap1|ENSMUSG00000022377.10|ArfGAP with SH3 domain, ankyrin repeat and PH domain1
mm10_v2_chr4_+_155704789_155704834	0.0858555	Crx_Gsc	ENSMUST00000030905.2|Ssu72|ENSMUSG00000029038.3|Ssu72 RNA polymerase II CTD phosphatase homolog (yeast)
mm10_v2_chr12_-_25096080_25096096	0.0841547	Crx_Gsc	ENSMUST00000020974.6|Id2|ENSMUSG00000020644.8|inhibitor of DNA binding 2
mm10_v2_chrX_-_103186618_103186671	0.083809	Crx_Gsc	ENSMUST00000121720.1|Nap1l2|ENSMUSG00000082229.1|nucleosome assembly protein 1-like 2
mm10_v2_chr5_+_129584169_129584232	0.0829463	Crx_Gsc	ENSMUST00000031390.8|Mmp17|ENSMUSG00000029436.8|matrix metallopeptidase 17
mm10_v2_chr5_-_92435219_92435235	0.0821608	Crx_Gsc	ENSMUST00000038514.8|Nup54|ENSMUSG00000034826.8|nucleoporin 54
mm10_v2_chr13_+_54789500_54789645	0.0812753	Crx_Gsc	ENSMUST00000163915.1|Tspan17|ENSMUSG00000025875.8|tetraspanin 17 	ENSMUST00000099503.3|Tspan17|ENSMUSG00000025875.8|tetraspanin 17 	ENSMUST00000171859.1|Tspan17|ENSMUSG00000025875.8|tetraspanin 17
mm10_v2_chr4_-_40703188_40703203	0.081133	Crx_Gsc	ENSMUST00000030119.3|Aptx|ENSMUSG00000028411.9|aprataxin
mm10_v2_chr7_+_92875253_92875284	0.0806668	Crx_Gsc	ENSMUST00000076052.6|Prcp|ENSMUSG00000061119.6|prolylcarboxypeptidase (angiotensinase C)
mm10_v2_chr1_+_74791516_74791516	0.0798782	Crx_Gsc	ENSMUST00000006718.8|Wnt10a|ENSMUSG00000026167.8|wingless related MMTV integration site 10a
mm10_v2_chr11_+_115475645_115475727	0.079747	Crx_Gsc	ENSMUST00000035240.6|Armc7|ENSMUSG00000057219.5|armadillo repeat containing 7
mm10_v2_chr11_+_96789213_96789249	0.079254	Crx_Gsc	ENSMUST00000079702.3|Cbx1|ENSMUSG00000018666.7|chromobox 1
mm10_v2_chr13_-_92354943_92355025	0.0786999	Crx_Gsc	ENSMUST00000022220.6|Msh3|ENSMUSG00000014850.9|mutS homolog 3 (E. coli)
mm10_v2_chr19_-_32712287_32712336	0.0779974	Crx_Gsc	ENSMUST00000070210.4|Atad1|ENSMUSG00000013662.5|ATPase family, AAA domain containing 1
mm10_v2_chr7_-_114276107_114276125	0.0777939	Crx_Gsc	ENSMUST00000033008.9|Psma1|ENSMUSG00000030751.11|proteasome (prosome, macropain) subunit, alpha type 1
mm10_v2_chr4_-_108406676_108406745	0.0759669	Crx_Gsc	ENSMUST00000184609.1|Gpx7|ENSMUSG00000028597.11|glutathione peroxidase 7
mm10_v2_chr1_+_109982710_109982710	0.0747064	Crx_Gsc	ENSMUST00000112701.1|Cdh7|ENSMUSG00000026312.11|cadherin 7, type 2
mm10_v2_chr9_+_38719024_38719055	0.0746181	Crx_Gsc	ENSMUST00000129598.1|Vwa5a|ENSMUSG00000023186.8|von Willebrand factor A domain containing 5A
mm10_v2_chr8_-_79711631_79711740	0.0736808	Crx_Gsc	ENSMUST00000080536.6|Abce1|ENSMUSG00000058355.6|ATP-binding cassette, sub-family E (OABP), member 1
mm10_v2_chr7_-_63938862_63938933	0.0735445	Crx_Gsc	ENSMUST00000063694.8|Klf13|ENSMUSG00000052040.9|Kruppel-like factor 13
mm10_v2_chr7_-_46795661_46795722	0.0729016	Crx_Gsc	ENSMUST00000123725.1|Hps5|ENSMUSG00000014418.9|Hermansky-Pudlak syndrome 5 homolog (human)
mm10_v2_chr2_-_32381909_32381938	0.0722637	Crx_Gsc	ENSMUST00000048792.4|1110008P14Rik|ENSMUSG00000039195.4|RIKEN cDNA 1110008P14 gene
mm10_v2_chr10_-_78487842_78487842	0.0722175	Crx_Gsc	ENSMUST00000069431.4|Gm9978|ENSMUSG00000055704.4|predicted gene 9978
mm10_v2_chr12_+_55124528_55124528	0.0721478	Crx_Gsc	ENSMUST00000177768.1|Fam177a|ENSMUSG00000095595.1|family with sequence similarity 177, member A
mm10_v2_chr11_-_116412965_116413004	0.0714013	Crx_Gsc	ENSMUST00000100202.3|Rnf157|ENSMUSG00000052949.8|ring finger protein 157 	ENSMUST00000106398.2|Rnf157|ENSMUSG00000052949.8|ring finger protein 157
mm10_v2_chr2_+_163225363_163225469	0.0707024	Crx_Gsc	ENSMUST00000099110.3|Tox2|ENSMUSG00000074607.5|TOX high mobility group box family member 2 	ENSMUST00000165937.1|Tox2|ENSMUSG00000074607.5|TOX high mobility group box family member 2
mm10_v2_chr18_+_31804057_31804120	0.070289	Crx_Gsc	ENSMUST00000025264.6|Wdr33|ENSMUSG00000024400.9|WD repeat domain 33 	ENSMUST00000082319.7|Wdr33|ENSMUSG00000024400.9|WD repeat domain 33
mm10_v2_chr1_+_134560157_134560180	0.0701956	Crx_Gsc	ENSMUST00000047714.7|Kdm5b|ENSMUSG00000042207.11|lysine (K)-specific demethylase 5B
mm10_v2_chr13_-_90089060_90089092	0.0701292	Crx_Gsc	ENSMUST00000161396.1|Xrcc4|ENSMUSG00000021615.7|X-ray repair complementing defective repair in Chinese hamster cells 4
mm10_v2_chr14_-_76010863_76010931	0.0700248	Crx_Gsc	ENSMUST00000088922.4|Gtf2f2|ENSMUSG00000067995.4|general transcription factor IIF, polypeptide 2
mm10_v2_chr1_-_185329331_185329401	0.0699823	Crx_Gsc	ENSMUST00000027921.4|Iars2|ENSMUSG00000026618.5|isoleucine-tRNA synthetase 2, mitochondrial 	ENSMUST00000110975.1|Iars2|ENSMUSG00000026618.5|isoleucine-tRNA synthetase 2, mitochondrial 	ENSMUST00000110974.3|Iars2|ENSMUSG00000026618.5|isoleucine-tRNA synthetase 2, mitochondrial
mm10_v2_chr2_-_30093607_30093641	0.067565	Crx_Gsc	ENSMUST00000081838.6|Zdhhc12|ENSMUSG00000015335.10|zinc finger, DHHC domain containing 12
mm10_v2_chr1_-_138848576_138848603	0.067156	Crx_Gsc	ENSMUST00000112030.2|Lhx9|ENSMUSG00000019230.8|LIM homeobox protein 9
mm10_v2_chrX_+_52791179_52791201	0.067086	Crx_Gsc	ENSMUST00000101588.1|Ccdc160|ENSMUSG00000073207.1|coiled-coil domain containing 160
mm10_v2_chr10_+_77622275_77622361	0.0666478	Crx_Gsc	ENSMUST00000174510.1|Ube2g2|ENSMUSG00000009293.11|ubiquitin-conjugating enzyme E2G 2 	ENSMUST00000172813.1|Ube2g2|ENSMUSG00000009293.11|ubiquitin-conjugating enzyme E2G 2
mm10_v2_chr5_+_76656512_76656512	0.0641513	Crx_Gsc	ENSMUST00000086909.4|Gm10430|ENSMUSG00000072855.2|predicted gene 10430
mm10_v2_chr13_+_112467504_112467593	0.0637714	Crx_Gsc	ENSMUST00000183868.1|Il6st|ENSMUSG00000021756.6|interleukin 6 signal transducer
mm10_v2_chr8_+_106150359_106150417	0.0622131	Crx_Gsc	ENSMUST00000034377.6|Pla2g15|ENSMUSG00000031903.6|phospholipase A2, group XV
mm10_v2_chr1_+_178187417_178187713	0.0609397	Crx_Gsc	ENSMUST00000161075.1|Desi2|ENSMUSG00000026502.7|desumoylating isopeptidase 2 	ENSMUST00000027783.7|Desi2|ENSMUSG00000026502.7|desumoylating isopeptidase 2
mm10_v2_chr9_-_60687459_60687672	0.0604154	Crx_Gsc	ENSMUST00000114032.1|Lrrc49|ENSMUSG00000047766.9|leucine rich repeat containing 49 	ENSMUST00000166168.1|Lrrc49|ENSMUSG00000047766.9|leucine rich repeat containing 49 	ENSMUST00000132366.1|Lrrc49|ENSMUSG00000047766.9|leucine rich repeat containing 49
mm10_v2_chr3_-_59344256_59344367	0.0597162	Crx_Gsc	ENSMUST00000039419.6|Igsf10|ENSMUSG00000036334.7|immunoglobulin superfamily, member 10
mm10_v2_chr7_-_15879844_15879968	0.0585729	Crx_Gsc	ENSMUST00000172758.1|Crx|ENSMUSG00000041578.9|cone-rod homeobox containing gene 	ENSMUST00000044434.6|Crx|ENSMUSG00000041578.9|cone-rod homeobox containing gene
mm10_v2_chr19_+_3767397_3767523	0.0583963	Crx_Gsc	ENSMUST00000113974.4|Suv420h1|ENSMUSG00000045098.12|suppressor of variegation 4-20 homolog 1 (Drosophila) 	ENSMUST00000113972.2|Suv420h1|ENSMUSG00000045098.12|suppressor of variegation 4-20 homolog 1 (Drosophila) 	ENSMUST00000113973.1|Suv420h1|ENSMUSG00000045098.12|suppressor of variegation 4-20 homolog 1 (Drosophila) 	ENSMUST00000113977.2|Suv420h1|ENSMUSG00000045098.12|suppressor of variegation 4-20 homolog 1 (Drosophila) 	ENSMUST00000052699.6|Suv420h1|ENSMUSG00000045098.12|suppressor of variegation 4-20 homolog 1 (Drosophila) 	ENSMUST00000113968.2|Suv420h1|ENSMUSG00000045098.12|suppressor of variegation 4-20 homolog 1 (Drosophila)
mm10_v2_chr4_+_84884366_84884407	0.0578096	Crx_Gsc	ENSMUST00000102819.3|Cntln|ENSMUSG00000038070.9|centlein, centrosomal protein
mm10_v2_chr9_+_88581036_88581036	0.0574165	Crx_Gsc	ENSMUST00000164661.2|Trim43a|ENSMUSG00000090693.2|tripartite motif-containing 43A
mm10_v2_chr11_+_96789149_96789206	0.0568147	Crx_Gsc	ENSMUST00000093943.3|Cbx1|ENSMUSG00000018666.7|chromobox 1
mm10_v2_chr5_-_139484420_139484473	0.0564988	Crx_Gsc	ENSMUST00000150992.1|Zfand2a|ENSMUSG00000053581.7|zinc finger, AN1-type domain 2A
mm10_v2_chr7_-_103741322_103741322	0.0558477	Crx_Gsc	ENSMUST00000051346.2|Olfr629|ENSMUSG00000047545.2|olfactory receptor 629
mm10_v2_chr4_+_21727695_21727716	0.0545815	Crx_Gsc	ENSMUST00000065928.4|Ccnc|ENSMUSG00000028252.14|cyclin C
mm10_v2_chr1_+_157458554_157458597	0.0539656	Crx_Gsc	ENSMUST00000046743.4|BC026585|ENSMUSG00000033488.5|cDNA sequence BC026585 	ENSMUST00000119891.1|BC026585|ENSMUSG00000033488.5|cDNA sequence BC026585
mm10_v2_chr12_-_80260356_80260371	0.0530134	Crx_Gsc	ENSMUST00000021554.8|Actn1|ENSMUSG00000015143.8|actinin, alpha 1
mm10_v2_chr18_+_3471630_3471630	0.0524325	Crx_Gsc	ENSMUST00000179907.1|G430049J08Rik|ENSMUSG00000096528.1|RIKEN cDNA G430049J08 gene
mm10_v2_chr9_-_50617428_50617467	0.0510328	Crx_Gsc	ENSMUST00000131351.1|AU019823|ENSMUSG00000059820.8|expressed sequence AU019823 	ENSMUST00000171462.1|AU019823|ENSMUSG00000059820.8|expressed sequence AU019823
mm10_v2_chr14_+_65266701_65266752	0.0508827	Crx_Gsc	ENSMUST00000169656.1|Fbxo16|ENSMUSG00000034532.8|F-box protein 16
mm10_v2_chr1_+_134560190_134560213	0.050787	Crx_Gsc	ENSMUST00000112198.1|Kdm5b|ENSMUSG00000042207.11|lysine (K)-specific demethylase 5B 	ENSMUST00000112197.1|Kdm5b|ENSMUSG00000042207.11|lysine (K)-specific demethylase 5B
mm10_v2_chr7_-_141435327_141435397	0.0505636	Crx_Gsc	ENSMUST00000138865.1|Slc25a22|ENSMUSG00000019082.11|solute carrier family 25 (mitochondrial carrier, glutamate), member 22
mm10_v2_chr1_+_86064619_86064648	0.0500013	Crx_Gsc	ENSMUST00000027432.8|Psmd1|ENSMUSG00000026229.11|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1
mm10_v2_chr1_+_166254095_166254156	0.0496663	Crx_Gsc	ENSMUST00000111416.1|Ildr2|ENSMUSG00000040612.8|immunoglobulin-like domain containing receptor 2
mm10_v2_chr11_-_86257518_86257550	0.0485741	Crx_Gsc	ENSMUST00000136469.1|Ints2|ENSMUSG00000018068.7|integrator complex subunit 2 	ENSMUST00000018212.6|Ints2|ENSMUSG00000018068.7|integrator complex subunit 2
mm10_v2_chr6_-_13608011_13608100	0.0473244	Crx_Gsc	ENSMUST00000031554.2|Tmem168|ENSMUSG00000029569.3|transmembrane protein 168
mm10_v2_chr10_-_93891141_93891202	0.0472643	Crx_Gsc	ENSMUST00000180840.1|Metap2|ENSMUSG00000036112.8|methionine aminopeptidase 2
mm10_v2_chr13_+_98354234_98354250	0.0467973	Crx_Gsc	ENSMUST00000105098.3|Foxd1|ENSMUSG00000078302.3|forkhead box D1
mm10_v2_chr9_-_121839460_121839465	0.0465495	Crx_Gsc	ENSMUST00000135986.2|Ccdc13|ENSMUSG00000079235.4|coiled-coil domain containing 13
mm10_v2_chr17_-_87265866_87265935	0.0462112	Crx_Gsc	ENSMUST00000145895.1|Mcfd2|ENSMUSG00000024150.5|multiple coagulation factor deficiency 2 	ENSMUST00000129616.1|Mcfd2|ENSMUSG00000024150.5|multiple coagulation factor deficiency 2 	ENSMUST00000155904.1|Mcfd2|ENSMUSG00000024150.5|multiple coagulation factor deficiency 2 	ENSMUST00000151155.1|Mcfd2|ENSMUSG00000024150.5|multiple coagulation factor deficiency 2 	ENSMUST00000144236.1|Mcfd2|ENSMUSG00000024150.5|multiple coagulation factor deficiency 2 	ENSMUST00000024963.3|Mcfd2|ENSMUSG00000024150.5|multiple coagulation factor deficiency 2
mm10_v2_chr13_-_74208661_74208719	0.0460618	Crx_Gsc	ENSMUST00000035934.5|Exoc3|ENSMUSG00000034152.5|exocyst complex component 3
mm10_v2_chr8_+_45975514_45975558	0.0456986	Crx_Gsc	ENSMUST00000034051.6|Ufsp2|ENSMUSG00000031634.6|UFM1-specific peptidase 2
mm10_v2_chr5_-_110448486_110448519	0.0454606	Crx_Gsc	ENSMUST00000069483.5|Fbrsl1|ENSMUSG00000043323.10|fibrosin-like 1
mm10_v2_chr16_+_17208135_17208135	0.0444278	Crx_Gsc	ENSMUST00000169803.1|Rimbp3|ENSMUSG00000071636.5|RIMS binding protein 3
mm10_v2_chr15_-_79254737_79254764	0.0443479	Crx_Gsc	ENSMUST00000039752.3|Slc16a8|ENSMUSG00000032988.3|solute carrier family 16 (monocarboxylic acid transporters), member 8
mm10_v2_chr9_+_27030159_27030197	0.0443443	Crx_Gsc	ENSMUST00000073127.7|Ncapd3|ENSMUSG00000035024.9|non-SMC condensin II complex, subunit D3 	ENSMUST00000086198.4|Ncapd3|ENSMUSG00000035024.9|non-SMC condensin II complex, subunit D3
mm10_v2_chr13_-_81633119_81633154	0.0427798	Crx_Gsc	ENSMUST00000126444.1|Gpr98|ENSMUSG00000069170.7|G protein-coupled receptor 98 	ENSMUST00000128585.1|Gpr98|ENSMUSG00000069170.7|G protein-coupled receptor 98 	ENSMUST00000146749.1|Gpr98|ENSMUSG00000069170.7|G protein-coupled receptor 98 	ENSMUST00000095585.4|Gpr98|ENSMUSG00000069170.7|G protein-coupled receptor 98
mm10_v2_chr14_-_20546440_20546481	0.0425767	Crx_Gsc	ENSMUST00000161989.1|Ppp3cb|ENSMUSG00000021816.4|protein phosphatase 3, catalytic subunit, beta isoform
mm10_v2_chr6_+_86438360_86438405	0.0423187	Crx_Gsc	ENSMUST00000050497.7|C87436|ENSMUSG00000046679.10|expressed sequence C87436
mm10_v2_chr1_-_165194310_165194433	0.0413023	Crx_Gsc	ENSMUST00000043338.4|Sft2d2|ENSMUSG00000040848.6|SFT2 domain containing 2
mm10_v2_chr5_+_143651222_143651246	0.0411156	Crx_Gsc	ENSMUST00000110727.1|Cyth3|ENSMUSG00000018001.12|cytohesin 3
mm10_v2_chr8_+_78509319_78509399	0.0408483	Crx_Gsc	ENSMUST00000034111.8|Slc10a7|ENSMUSG00000031684.10|solute carrier family 10 (sodium/bile acid cotransporter family), member 7
mm10_v2_chr10_-_10558199_10558250	0.0400002	Crx_Gsc	ENSMUST00000019974.3|Rab32|ENSMUSG00000019832.3|RAB32, member RAS oncogene family
mm10_v2_chr1_-_43827751_43827800	0.0382977	Crx_Gsc	ENSMUST00000128261.1|Uxs1|ENSMUSG00000057363.6|UDP-glucuronate decarboxylase 1 	ENSMUST00000126008.1|Uxs1|ENSMUSG00000057363.6|UDP-glucuronate decarboxylase 1 	ENSMUST00000139451.1|Uxs1|ENSMUSG00000057363.6|UDP-glucuronate decarboxylase 1
mm10_v2_chr17_+_55445550_55445701	0.0370769	Crx_Gsc	ENSMUST00000025000.3|St6gal2|ENSMUSG00000024172.4|beta galactoside alpha 2,6 sialyltransferase 2
mm10_v2_chr4_+_21727726_21727790	0.0369873	Crx_Gsc	ENSMUST00000102997.1|Ccnc|ENSMUSG00000028252.14|cyclin C 	ENSMUST00000120679.1|Ccnc|ENSMUSG00000028252.14|cyclin C 	ENSMUST00000108240.2|Ccnc|ENSMUSG00000028252.14|cyclin C
mm10_v2_chr10_-_53379816_53379858	0.0368179	Crx_Gsc	ENSMUST00000095691.5|Cep85l|ENSMUSG00000038594.8|centrosomal protein 85-like
mm10_v2_chr7_+_92561141_92561210	0.0364892	Crx_Gsc	ENSMUST00000032842.6|Ccdc90b|ENSMUSG00000030613.7|coiled-coil domain containing 90B 	ENSMUST00000085017.4|Ccdc90b|ENSMUSG00000030613.7|coiled-coil domain containing 90B
mm10_v2_chr12_-_115964196_115964196	0.0357192	Crx_Gsc	ENSMUST00000103550.2|Ighv1-83|ENSMUSG00000096466.1|immunoglobulin heavy variable 1-83
mm10_v2_chr14_-_20181773_20181790	0.0351046	Crx_Gsc	ENSMUST00000024011.8|Kcnk5|ENSMUSG00000023243.8|potassium channel, subfamily K, member 5
mm10_v2_chr12_+_98920567_98920619	0.0348102	Crx_Gsc	ENSMUST00000085109.3|Ttc8|ENSMUSG00000021013.9|tetratricopeptide repeat domain 8 	ENSMUST00000079146.6|Ttc8|ENSMUSG00000021013.9|tetratricopeptide repeat domain 8
mm10_v2_chr5_+_53590215_53590351	0.0344369	Crx_Gsc	ENSMUST00000037618.6|Rbpj|ENSMUSG00000039191.6|recombination signal binding protein for immunoglobulin kappa J region
mm10_v2_chr6_+_117900311_117900349	0.0341236	Crx_Gsc	ENSMUST00000177743.1|Hnrnpf|ENSMUSG00000042079.7|heterogeneous nuclear ribonucleoprotein F 	ENSMUST00000167182.1|Hnrnpf|ENSMUSG00000042079.7|heterogeneous nuclear ribonucleoprotein F
mm10_v2_chr16_-_55838827_55838899	0.0338859	Crx_Gsc	ENSMUST00000096026.2|Nfkbiz|ENSMUSG00000035356.10|nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, zeta 	ENSMUST00000036273.6|Nfkbiz|ENSMUSG00000035356.10|nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, zeta 	ENSMUST00000114457.1|Nfkbiz|ENSMUSG00000035356.10|nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, zeta
mm10_v2_chr10_+_111972664_111972805	0.0328544	Crx_Gsc	ENSMUST00000163048.1|Krr1|ENSMUSG00000063334.10|KRR1, small subunit (SSU) processome component, homolog (yeast) 	ENSMUST00000174653.1|Krr1|ENSMUSG00000063334.10|KRR1, small subunit (SSU) processome component, homolog (yeast)
mm10_v2_chr17_-_35132050_35132050	0.0323577	Crx_Gsc	ENSMUST00000025249.6|Apom|ENSMUSG00000024391.7|apolipoprotein M
mm10_v2_chr6_+_123229843_123229863	0.0322818	Crx_Gsc	ENSMUST00000112554.2|Clec4n|ENSMUSG00000023349.8|C-type lectin domain family 4, member n 	ENSMUST00000024118.4|Clec4n|ENSMUSG00000023349.8|C-type lectin domain family 4, member n 	ENSMUST00000117130.1|Clec4n|ENSMUSG00000023349.8|C-type lectin domain family 4, member n
mm10_v2_chr18_-_60848911_60848976	0.031888	Crx_Gsc	ENSMUST00000177172.1|Tcof1|ENSMUSG00000024613.10|Treacher Collins Franceschetti syndrome 1, homolog 	ENSMUST00000175934.1|Tcof1|ENSMUSG00000024613.10|Treacher Collins Franceschetti syndrome 1, homolog 	ENSMUST00000176630.1|Tcof1|ENSMUSG00000024613.10|Treacher Collins Franceschetti syndrome 1, homolog
mm10_v2_chr8_+_123411424_123411562	0.029383	Crx_Gsc	ENSMUST00000071134.3|Tubb3|ENSMUSG00000062380.3|tubulin, beta 3 class III
mm10_v2_chr11_+_104231390_104231453	0.0266202	Crx_Gsc	ENSMUST00000106992.3|Mapt|ENSMUSG00000018411.11|microtubule-associated protein tau
mm10_v2_chr5_-_149053038_149053053	0.0264686	Crx_Gsc	ENSMUST00000085546.6|Hmgb1|ENSMUSG00000066551.6|high mobility group box 1
mm10_v2_chr17_+_29032664_29032681	0.0258271	Crx_Gsc	ENSMUST00000130216.1|Srsf3|ENSMUSG00000071172.6|serine/arginine-rich splicing factor 3
mm10_v2_chr4_+_65604984_65605052	0.0256311	Crx_Gsc	ENSMUST00000050850.7|Trim32|ENSMUSG00000051675.7|tripartite motif-containing 32 	ENSMUST00000107366.1|Trim32|ENSMUSG00000051675.7|tripartite motif-containing 32
mm10_v2_chr10_+_77622363_77622378	0.0252327	Crx_Gsc	ENSMUST00000172772.1|Ube2g2|ENSMUSG00000009293.11|ubiquitin-conjugating enzyme E2G 2
mm10_v2_chr1_-_119837613_119837673	0.0249733	Crx_Gsc	ENSMUST00000064091.5|Ptpn4|ENSMUSG00000026384.7|protein tyrosine phosphatase, non-receptor type 4
mm10_v2_chr5_-_92310003_92310024	0.0241647	Crx_Gsc	ENSMUST00000031364.1|Sdad1|ENSMUSG00000029415.1|SDA1 domain containing 1
mm10_v2_chr4_+_134496996_134497013	0.0238162	Crx_Gsc	ENSMUST00000095074.3|Paqr7|ENSMUSG00000037348.9|progestin and adipoQ receptor family member VII
mm10_v2_chr4_-_56947411_56947447	0.0237996	Crx_Gsc	ENSMUST00000107609.3|Tmem245|ENSMUSG00000055296.8|transmembrane protein 245 	ENSMUST00000068792.6|Tmem245|ENSMUSG00000055296.8|transmembrane protein 245
mm10_v2_chr10_-_62327757_62327768	0.0233656	Crx_Gsc	ENSMUST00000139228.1|Hk1|ENSMUSG00000037012.12|hexokinase 1
mm10_v2_chr10_-_9901079_9901250	0.0232837	Crx_Gsc	ENSMUST00000141722.1|Stxbp5|ENSMUSG00000019790.10|syntaxin binding protein 5 (tomosyn)
mm10_v2_chr19_-_12765447_12765632	0.0219098	Crx_Gsc	ENSMUST00000112933.1|Cntf|ENSMUSG00000079415.2|ciliary neurotrophic factor
mm10_v2_chr10_+_18407658_18407715	0.0207503	Crx_Gsc	ENSMUST00000037341.7|Nhsl1|ENSMUSG00000039835.9|NHS-like 1
mm10_v2_chr2_+_69861638_69861686	0.0202983	Crx_Gsc	ENSMUST00000112260.1|Ssb|ENSMUSG00000068882.7|Sjogren syndrome antigen B
mm10_v2_chr5_-_22550279_22550386	0.0198461	Crx_Gsc	ENSMUST00000030872.5|Orc5|ENSMUSG00000029012.5|origin recognition complex, subunit 5
mm10_v2_chr4_-_141053660_141053697	0.0190762	Crx_Gsc	ENSMUST00000040222.7|Crocc|ENSMUSG00000040860.10|ciliary rootlet coiled-coil, rootletin
mm10_v2_chr9_+_44334685_44334715	0.0189544	Crx_Gsc	ENSMUST00000052686.2|H2afx|ENSMUSG00000049932.2|H2A histone family, member X
mm10_v2_chr7_-_4752972_4753094	0.0187037	Crx_Gsc	ENSMUST00000183971.1|Cox6b2|ENSMUSG00000051811.8|cytochrome c oxidase subunit VIb polypeptide 2 	ENSMUST00000182173.1|Cox6b2|ENSMUSG00000051811.8|cytochrome c oxidase subunit VIb polypeptide 2 	ENSMUST00000182738.1|Cox6b2|ENSMUSG00000051811.8|cytochrome c oxidase subunit VIb polypeptide 2 	ENSMUST00000184143.1|Cox6b2|ENSMUSG00000051811.8|cytochrome c oxidase subunit VIb polypeptide 2 	ENSMUST00000182111.1|Cox6b2|ENSMUSG00000051811.8|cytochrome c oxidase subunit VIb polypeptide 2 	ENSMUST00000182048.1|Cox6b2|ENSMUSG00000051811.8|cytochrome c oxidase subunit VIb polypeptide 2 	ENSMUST00000063324.7|Cox6b2|ENSMUSG00000051811.8|cytochrome c oxidase subunit VIb polypeptide 2
mm10_v2_chr11_+_80428598_80428656	0.0185586	Crx_Gsc	ENSMUST00000173938.1|Psmd11|ENSMUSG00000017428.10|proteasome (prosome, macropain) 26S subunit, non-ATPase, 11 	ENSMUST00000017572.7|Psmd11|ENSMUSG00000017428.10|proteasome (prosome, macropain) 26S subunit, non-ATPase, 11
mm10_v2_chr2_-_130629994_130630038	0.0182199	Crx_Gsc	ENSMUST00000110262.1|Fastkd5|ENSMUSG00000079043.2|FAST kinase domains 5 	ENSMUST00000028761.4|Ubox5|ENSMUSG00000027300.9|U box domain containing 5
mm10_v2_chr5_-_45450143_45450201	0.0173238	Crx_Gsc	ENSMUST00000154962.1|Qdpr|ENSMUSG00000015806.6|quinoid dihydropteridine reductase
mm10_v2_chr2_-_101883010_101883023	0.0154304	Crx_Gsc	ENSMUST00000154525.1|Prr5l|ENSMUSG00000032841.9|proline rich 5 like
mm10_v2_chr9_-_8004585_8004623	0.0139807	Crx_Gsc	ENSMUST00000086580.5|Yap1|ENSMUSG00000053110.7|yes-associated protein 1 	ENSMUST00000065353.6|Yap1|ENSMUSG00000053110.7|yes-associated protein 1
mm10_v2_chr16_+_13109682_13109693	0.0136031	Crx_Gsc	ENSMUST00000023206.7|Ercc4|ENSMUSG00000022545.7|excision repair cross-complementing rodent repair deficiency, complementation group 4
mm10_v2_chr11_-_120598346_120598405	0.0128866	Crx_Gsc	ENSMUST00000026125.2|Alyref|ENSMUSG00000025134.2|Aly/REF export factor
mm10_v2_chr8_-_94876269_94876321	0.0125893	Crx_Gsc	ENSMUST00000046461.7|Dok4|ENSMUSG00000040631.7|docking protein 4
mm10_v2_chr5_+_121660528_121660631	0.011717	Crx_Gsc	ENSMUST00000031414.8|Brap|ENSMUSG00000029458.8|BRCA1 associated protein
mm10_v2_chr11_-_116189542_116189575	0.0115177	Crx_Gsc	ENSMUST00000148601.1|Acox1|ENSMUSG00000020777.10|acyl-Coenzyme A oxidase 1, palmitoyl
mm10_v2_chr4_-_43025792_43025832	0.0111942	Crx_Gsc	ENSMUST00000067481.5|Pigo|ENSMUSG00000028454.10|phosphatidylinositol glycan anchor biosynthesis, class O
mm10_v2_chr11_+_75486813_75486866	0.0109039	Crx_Gsc	ENSMUST00000018449.4|Prpf8|ENSMUSG00000020850.8|pre-mRNA processing factor 8 	ENSMUST00000102510.1|Prpf8|ENSMUSG00000020850.8|pre-mRNA processing factor 8 	ENSMUST00000131283.1|Prpf8|ENSMUSG00000020850.8|pre-mRNA processing factor 8
mm10_v2_chr11_-_69837781_69837787	0.0104568	Crx_Gsc	ENSMUST00000108634.2|Nlgn2|ENSMUSG00000051790.9|neuroligin 2
mm10_v2_chr18_-_70141568_70141622	0.0101498	Crx_Gsc	ENSMUST00000121693.1|Rab27b|ENSMUSG00000024511.9|RAB27b, member RAS oncogene family
mm10_v2_chr8_+_117498272_117498291	0.0100594	Crx_Gsc	ENSMUST00000081232.7|Plcg2|ENSMUSG00000034330.9|phospholipase C, gamma 2
mm10_v2_chr4_-_43025756_43025788	0.0099734	Crx_Gsc	ENSMUST00000098109.2|Pigo|ENSMUSG00000028454.10|phosphatidylinositol glycan anchor biosynthesis, class O
mm10_v2_chr3_+_85915722_85915722	0.00945363	Crx_Gsc	ENSMUST00000054148.7|Gm9790|ENSMUSG00000044330.7|predicted gene 9790
mm10_v2_chr9_-_78481724_78481751	0.0094	Crx_Gsc	ENSMUST00000042235.8|Eef1a1|ENSMUSG00000037742.8|eukaryotic translation elongation factor 1 alpha 1
mm10_v2_chr6_-_134566913_134566995	0.00939496	Crx_Gsc	ENSMUST00000032322.8|Lrp6|ENSMUSG00000030201.9|low density lipoprotein receptor-related protein 6
mm10_v2_chr4_-_14621494_14621506	0.00926938	Crx_Gsc	ENSMUST00000149633.1|Slc26a7|ENSMUSG00000040569.7|solute carrier family 26, member 7
mm10_v2_chrX_-_85776606_85776653	0.00907035	Crx_Gsc	ENSMUST00000142152.1|Gyk|ENSMUSG00000025059.10|glycerol kinase 	ENSMUST00000156390.1|Gyk|ENSMUSG00000025059.10|glycerol kinase 	ENSMUST00000113978.2|Gyk|ENSMUSG00000025059.10|glycerol kinase
mm10_v2_chr5_-_137531204_137531297	0.00864366	Crx_Gsc	ENSMUST00000150063.2|Gnb2|ENSMUSG00000029713.9|guanine nucleotide binding protein (G protein), beta 2
mm10_v2_chr17_-_12992487_12992554	0.00837103	Crx_Gsc	ENSMUST00000159551.1|Wtap|ENSMUSG00000060475.6|Wilms' tumour 1-associating protein 	ENSMUST00000160781.1|Wtap|ENSMUSG00000060475.6|Wilms' tumour 1-associating protein
mm10_v2_chr1_-_152625212_152625220	0.0081411	Crx_Gsc	ENSMUST00000027760.7|Rgl1|ENSMUSG00000026482.7|ral guanine nucleotide dissociation stimulator,-like 1
mm10_v2_chr1_-_150392719_150392762	0.00805998	Crx_Gsc	ENSMUST00000006167.6|BC003331|ENSMUSG00000006010.8|cDNA sequence BC003331 	ENSMUST00000094477.2|BC003331|ENSMUSG00000006010.8|cDNA sequence BC003331 	ENSMUST00000097547.3|BC003331|ENSMUSG00000006010.8|cDNA sequence BC003331
mm10_v2_chr2_+_174284312_174284326	0.00758141	Crx_Gsc	ENSMUST00000109095.1|Gnas|ENSMUSG00000027523.13|GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus 	ENSMUST00000109096.2|Gnas|ENSMUSG00000027523.13|GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus 	ENSMUST00000180362.1|Gnas|ENSMUSG00000027523.13|GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus
mm10_v2_chr11_+_49203465_49203524	0.00703438	Crx_Gsc	ENSMUST00000150284.1|Zfp62|ENSMUSG00000046311.7|zinc finger protein 62 	ENSMUST00000109197.1|Zfp62|ENSMUSG00000046311.7|zinc finger protein 62 	ENSMUST00000151228.1|Zfp62|ENSMUSG00000046311.7|zinc finger protein 62
mm10_v2_chr9_-_50617228_50617289	0.00688357	Crx_Gsc	ENSMUST00000147671.1|AU019823|ENSMUSG00000059820.8|expressed sequence AU019823 	ENSMUST00000145139.1|AU019823|ENSMUSG00000059820.8|expressed sequence AU019823 	ENSMUST00000155435.1|AU019823|ENSMUSG00000059820.8|expressed sequence AU019823
mm10_v2_chr2_-_58052832_58052870	0.00519986	Crx_Gsc	ENSMUST00000090940.5|Ermn|ENSMUSG00000026830.9|ermin, ERM-like protein
mm10_v2_chr2_-_30093642_30093679	0.00497741	Crx_Gsc	ENSMUST00000102865.4|Zdhhc12|ENSMUSG00000015335.10|zinc finger, DHHC domain containing 12
mm10_v2_chr2_+_30077684_30077684	0.00408164	Crx_Gsc	ENSMUST00000125346.1|Pkn3|ENSMUSG00000026785.8|protein kinase N3
mm10_v2_chr12_-_31950535_31950560	0.00395354	Crx_Gsc	ENSMUST00000172314.2|Hbp1|ENSMUSG00000002996.11|high mobility group box transcription factor 1
mm10_v2_chr14_-_87141114_87141148	0.00342852	Crx_Gsc	ENSMUST00000168889.1|Diap3|ENSMUSG00000022021.7|diaphanous homolog 3 (Drosophila)
mm10_v2_chr19_-_6128144_6128191	0.00322894	Crx_Gsc	ENSMUST00000154601.1|Snx15|ENSMUSG00000024787.7|sorting nexin 15 	ENSMUST00000138931.1|Snx15|ENSMUSG00000024787.7|sorting nexin 15
mm10_v2_chrX_-_100626568_100626611	0.00309416	Crx_Gsc	ENSMUST00000015812.5|Pdzd11|ENSMUSG00000015668.7|PDZ domain containing 11
mm10_v2_chr19_-_6128208_6128304	0.00282317	Crx_Gsc	ENSMUST00000025702.7|Snx15|ENSMUSG00000024787.7|sorting nexin 15
mm10_v2_chr4_-_133633419_133633525	0.00251684	Crx_Gsc	ENSMUST00000084238.4|Zdhhc18|ENSMUSG00000037553.8|zinc finger, DHHC domain containing 18
mm10_v2_chr7_-_133123770_133123876	0.00122689	Crx_Gsc	ENSMUST00000164896.1|Ctbp2|ENSMUSG00000030970.10|C-terminal binding protein 2 	ENSMUST00000171968.1|Ctbp2|ENSMUSG00000030970.10|C-terminal binding protein 2
mm10_v2_chr1_-_44218952_44218961	0.000410183	Crx_Gsc	ENSMUST00000054801.3|Mettl21e|ENSMUSG00000046828.3|methyltransferase like 21E
