mm10_v2_chr2_+_71528657_71528683	8.62801	Hoxa4	ENSMUST00000126400.1|Dlx1|ENSMUSG00000041911.3|distal-less homeobox 1
mm10_v2_chr2_-_77519565_77519647	6.44459	Hoxa4	ENSMUST00000111830.2|Zfp385b|ENSMUSG00000027016.11|zinc finger protein 385B
mm10_v2_chr4_+_144892813_144892835	5.73579	Hoxa4	ENSMUST00000105744.1|Dhrs3|ENSMUSG00000066026.8|dehydrogenase/reductase (SDR family) member 3 	ENSMUST00000171001.1|Dhrs3|ENSMUSG00000066026.8|dehydrogenase/reductase (SDR family) member 3
mm10_v2_chr7_-_19699008_19699166	5.01763	Hoxa4	ENSMUST00000174355.1|Apoe|ENSMUSG00000002985.9|apolipoprotein E 	ENSMUST00000172983.1|Apoe|ENSMUSG00000002985.9|apolipoprotein E 	ENSMUST00000174710.1|Apoe|ENSMUSG00000002985.9|apolipoprotein E 	ENSMUST00000167646.2|Apoe|ENSMUSG00000002985.9|apolipoprotein E 	ENSMUST00000003066.9|Apoe|ENSMUSG00000002985.9|apolipoprotein E 	ENSMUST00000174064.1|Apoe|ENSMUSG00000002985.9|apolipoprotein E
mm10_v2_chr5_+_17574726_17574899	4.76424	Hoxa4	ENSMUST00000169603.1|Sema3c|ENSMUSG00000028780.7|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C
mm10_v2_chr4_+_144893077_144893103	4.71249	Hoxa4	ENSMUST00000154208.1|Dhrs3|ENSMUSG00000066026.8|dehydrogenase/reductase (SDR family) member 3
mm10_v2_chr1_+_178529113_178529134	3.98411	Hoxa4	ENSMUST00000161017.1|Kif26b|ENSMUSG00000026494.6|kinesin family member 26B
mm10_v2_chr4_+_144893127_144893151	3.84313	Hoxa4	ENSMUST00000142808.1|Dhrs3|ENSMUSG00000066026.8|dehydrogenase/reductase (SDR family) member 3
mm10_v2_chr1_-_190170671_190170744	3.82782	Hoxa4	ENSMUST00000175916.1|Prox1|ENSMUSG00000010175.7|prospero-related homeobox 1
mm10_v2_chr12_+_38780284_38780349	3.72992	Hoxa4	ENSMUST00000162563.1|Etv1|ENSMUSG00000004151.10|ets variant gene 1 	ENSMUST00000161164.1|Etv1|ENSMUSG00000004151.10|ets variant gene 1 	ENSMUST00000160996.1|Etv1|ENSMUSG00000004151.10|ets variant gene 1
mm10_v2_chr12_+_38780817_38780854	2.64763	Hoxa4	ENSMUST00000160856.1|Etv1|ENSMUSG00000004151.10|ets variant gene 1
mm10_v2_chr3_+_5218546_5218561	2.53254	Hoxa4	ENSMUST00000026284.6|Zfhx4|ENSMUSG00000025255.12|zinc finger homeodomain 4
mm10_v2_chr14_-_79771305_79771318	2.49762	Hoxa4	ENSMUST00000039568.5|Pcdh8|ENSMUSG00000036422.5|protocadherin 8
mm10_v2_chr13_-_78196373_78196440	2.31001	Hoxa4	ENSMUST00000125176.2|Nr2f1|ENSMUSG00000069171.7|nuclear receptor subfamily 2, group F, member 1
mm10_v2_chr5_+_137030275_137030295	1.96928	Hoxa4	ENSMUST00000041543.8|Vgf|ENSMUSG00000037428.8|VGF nerve growth factor inducible
mm10_v2_chr15_+_32920723_32920826	1.87126	Hoxa4	ENSMUST00000022871.5|Sdc2|ENSMUSG00000022261.5|syndecan 2
mm10_v2_chr18_+_37435602_37435636	1.86373	Hoxa4	ENSMUST00000055495.5|Pcdhb12|ENSMUSG00000043458.5|protocadherin beta 12
mm10_v2_chr2_+_170731807_170731920	1.84205	Hoxa4	ENSMUST00000029075.4|Dok5|ENSMUSG00000027560.4|docking protein 5
mm10_v2_chr1_+_19103022_19103043	1.79239	Hoxa4	ENSMUST00000037294.7|Tfap2d|ENSMUSG00000042596.7|transcription factor AP-2, delta
mm10_v2_chr3_+_5218516_5218544	1.77027	Hoxa4	ENSMUST00000175866.1|Zfhx4|ENSMUSG00000025255.12|zinc finger homeodomain 4
mm10_v2_chr15_+_99055164_99055183	1.73337	Hoxa4	ENSMUST00000047104.7|Prph|ENSMUSG00000023484.7|peripherin 	ENSMUST00000024249.3|Prph|ENSMUSG00000023484.7|peripherin
mm10_v2_chr5_-_111761697_111761727	1.69159	Hoxa4	ENSMUST00000129146.1|E130006D01Rik|ENSMUSG00000085271.1|RIKEN cDNA E130006D01 gene 	ENSMUST00000137398.1|E130006D01Rik|ENSMUSG00000085271.1|RIKEN cDNA E130006D01 gene 	ENSMUST00000129065.1|E130006D01Rik|ENSMUSG00000085271.1|RIKEN cDNA E130006D01 gene
mm10_v2_chr17_+_39846958_39847059	1.63907	Hoxa4	ENSMUST00000182010.1|Gm26924|ENSMUSG00000098178.1|predicted gene, 26924
mm10_v2_chr5_-_122002340_122002368	1.57028	Hoxa4	ENSMUST00000134326.1|Cux2|ENSMUSG00000042589.12|cut-like homeobox 2
mm10_v2_chr3_+_86070915_86070915	1.56298	Hoxa4	ENSMUST00000182666.1|Sh3d19|ENSMUSG00000028082.7|SH3 domain protein D19
mm10_v2_chr6_+_124304646_124304671	1.50049	Hoxa4	ENSMUST00000112541.2|Cd163|ENSMUSG00000008845.3|CD163 antigen 	ENSMUST00000032234.2|Cd163|ENSMUSG00000008845.3|CD163 antigen
mm10_v2_chr12_+_38781093_38781129	1.44573	Hoxa4	ENSMUST00000161513.1|Etv1|ENSMUSG00000004151.10|ets variant gene 1
mm10_v2_chr18_-_15063560_15063617	1.41457	Hoxa4	ENSMUST00000168989.1|Kctd1|ENSMUSG00000036225.8|potassium channel tetramerisation domain containing 1
mm10_v2_chr12_+_38783503_38783527	1.40471	Hoxa4	ENSMUST00000159334.1|Etv1|ENSMUSG00000004151.10|ets variant gene 1
mm10_v2_chr7_+_51879041_51879064	1.30778	Hoxa4	ENSMUST00000107591.2|Gas2|ENSMUSG00000030498.8|growth arrest specific 2
mm10_v2_chr7_+_51878967_51879000	1.25197	Hoxa4	ENSMUST00000051912.6|Gas2|ENSMUSG00000030498.8|growth arrest specific 2
mm10_v2_chr3_-_80802789_80802840	1.25183	Hoxa4	ENSMUST00000107745.1|Gria2|ENSMUSG00000033981.8|glutamate receptor, ionotropic, AMPA2 (alpha 2) 	ENSMUST00000075316.4|Gria2|ENSMUSG00000033981.8|glutamate receptor, ionotropic, AMPA2 (alpha 2)
mm10_v2_chr18_+_60963517_60963603	1.24874	Hoxa4	ENSMUST00000115295.2|Camk2a|ENSMUSG00000024617.10|calcium/calmodulin-dependent protein kinase II alpha 	ENSMUST00000039904.6|Camk2a|ENSMUSG00000024617.10|calcium/calmodulin-dependent protein kinase II alpha
mm10_v2_chr14_+_116925379_116925430	1.24156	Hoxa4	ENSMUST00000088483.3|Gpc6|ENSMUSG00000058571.4|glypican 6
mm10_v2_chr2_+_70563435_70563461	1.23488	Hoxa4	ENSMUST00000123330.1|Gad1|ENSMUSG00000070880.4|glutamate decarboxylase 1
mm10_v2_chr12_+_38783455_38783482	1.22956	Hoxa4	ENSMUST00000161980.1|Etv1|ENSMUSG00000004151.10|ets variant gene 1 	ENSMUST00000160701.1|Etv1|ENSMUSG00000004151.10|ets variant gene 1
mm10_v2_chr18_+_37300799_37300835	1.2208	Hoxa4	ENSMUST00000051754.1|Pcdhb3|ENSMUSG00000045498.1|protocadherin beta 3
mm10_v2_chr5_+_115908644_115908734	1.1487	Hoxa4	ENSMUST00000141101.1|Cit|ENSMUSG00000029516.13|citron
mm10_v2_chr3_+_5218589_5218614	1.13315	Hoxa4	ENSMUST00000177488.1|Zfhx4|ENSMUSG00000025255.12|zinc finger homeodomain 4
mm10_v2_chr1_-_163313661_163313710	1.07625	Hoxa4	ENSMUST00000174397.1|Prrx1|ENSMUSG00000026586.10|paired related homeobox 1 	ENSMUST00000075805.6|Prrx1|ENSMUSG00000026586.10|paired related homeobox 1 	ENSMUST00000027878.7|Prrx1|ENSMUSG00000026586.10|paired related homeobox 1
mm10_v2_chr5_+_64812336_64812350	1.07478	Hoxa4	ENSMUST00000166409.1|Klf3|ENSMUSG00000029178.8|Kruppel-like factor 3 (basic)
mm10_v2_chr2_-_120154600_120154611	1.04637	Hoxa4	ENSMUST00000028755.7|Ehd4|ENSMUSG00000027293.7|EH-domain containing 4
mm10_v2_chr12_+_91400990_91401022	0.992086	Hoxa4	ENSMUST00000021346.7|Tshr|ENSMUSG00000020963.8|thyroid stimulating hormone receptor 	ENSMUST00000021343.6|Tshr|ENSMUSG00000020963.8|thyroid stimulating hormone receptor
mm10_v2_chrX_+_136822671_136822780	0.983428	Hoxa4	ENSMUST00000033800.6|Plp1|ENSMUSG00000031425.9|proteolipid protein (myelin) 1
mm10_v2_chr1_+_132298606_132298631	0.977179	Hoxa4	ENSMUST00000046071.4|Klhdc8a|ENSMUSG00000042115.4|kelch domain containing 8A
mm10_v2_chr2_+_4400958_4400975	0.970586	Hoxa4	ENSMUST00000075767.7|Frmd4a|ENSMUSG00000026657.10|FERM domain containing 4A
mm10_v2_chr1_-_152766281_152766319	0.966385	Hoxa4	ENSMUST00000111859.1|Rgl1|ENSMUSG00000026482.7|ral guanine nucleotide dissociation stimulator,-like 1 	ENSMUST00000148865.1|Rgl1|ENSMUSG00000026482.7|ral guanine nucleotide dissociation stimulator,-like 1
mm10_v2_chr2_-_116065047_116065133	0.956769	Hoxa4	ENSMUST00000028639.6|Meis2|ENSMUSG00000027210.14|Meis homeobox 2 	ENSMUST00000102538.4|Meis2|ENSMUSG00000027210.14|Meis homeobox 2
mm10_v2_chr4_+_11579647_11579674	0.956765	Hoxa4	ENSMUST00000180239.1|Fsbp|ENSMUSG00000094595.1|fibrinogen silencer binding protein
mm10_v2_chr15_+_62037986_62038061	0.941682	Hoxa4	ENSMUST00000182956.1|Pvt1|ENSMUSG00000097039.2|plasmacytoma variant translocation 1 	ENSMUST00000182075.1|Pvt1|ENSMUSG00000097039.2|plasmacytoma variant translocation 1 	ENSMUST00000180432.2|Pvt1|ENSMUSG00000097039.2|plasmacytoma variant translocation 1 	ENSMUST00000181416.2|Pvt1|ENSMUSG00000097039.2|plasmacytoma variant translocation 1 	ENSMUST00000181657.2|Pvt1|ENSMUSG00000097039.2|plasmacytoma variant translocation 1
mm10_v2_chrX_+_136822781_136822840	0.934641	Hoxa4	ENSMUST00000113085.1|Plp1|ENSMUSG00000031425.9|proteolipid protein (myelin) 1
mm10_v2_chr18_+_37447641_37447674	0.901325	Hoxa4	ENSMUST00000052387.3|Pcdhb14|ENSMUSG00000044043.3|protocadherin beta 14
mm10_v2_chr13_+_63014934_63014934	0.893036	Hoxa4	ENSMUST00000091560.4|2010111I01Rik|ENSMUSG00000021458.10|RIKEN cDNA 2010111I01 gene
mm10_v2_chr19_-_28967794_28967852	0.866043	Hoxa4	ENSMUST00000162110.1|4430402I18Rik|ENSMUSG00000064202.9|RIKEN cDNA 4430402I18 gene
mm10_v2_chr18_-_31949571_31949636	0.847714	Hoxa4	ENSMUST00000064016.5|Gpr17|ENSMUSG00000052229.5|G protein-coupled receptor 17
mm10_v2_chr10_-_70655934_70655972	0.84543	Hoxa4	ENSMUST00000162144.1|Phyhipl|ENSMUSG00000037747.3|phytanoyl-CoA hydroxylase interacting protein-like 	ENSMUST00000162793.1|Phyhipl|ENSMUSG00000037747.3|phytanoyl-CoA hydroxylase interacting protein-like
mm10_v2_chr1_-_152766323_152766352	0.840717	Hoxa4	ENSMUST00000111857.1|Rgl1|ENSMUSG00000026482.7|ral guanine nucleotide dissociation stimulator,-like 1
mm10_v2_chr7_+_34251038_34251038	0.829948	Hoxa4	ENSMUST00000105172.1|Gm6096|ENSMUSG00000078380.1|predicted gene 6096
mm10_v2_chr4_-_129378116_129378116	0.751806	Hoxa4	ENSMUST00000030610.2|Zbtb8a|ENSMUSG00000028807.2|zinc finger and BTB domain containing 8a
mm10_v2_chr18_+_37489465_37489465	0.749686	Hoxa4	ENSMUST00000055949.2|Pcdhb18|ENSMUSG00000048347.4|protocadherin beta 18
mm10_v2_chr18_+_37355271_37355271	0.743419	Hoxa4	ENSMUST00000051163.1|Pcdhb8|ENSMUSG00000045876.3|protocadherin beta 8
mm10_v2_chr2_-_116065798_116065853	0.742382	Hoxa4	ENSMUST00000110907.1|Meis2|ENSMUSG00000027210.14|Meis homeobox 2 	ENSMUST00000110908.2|Meis2|ENSMUSG00000027210.14|Meis homeobox 2
mm10_v2_chrX_+_56454871_56454887	0.737852	Hoxa4	ENSMUST00000039374.2|Ddx26b|ENSMUSG00000035967.9|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B 	ENSMUST00000101553.2|Ddx26b|ENSMUSG00000035967.9|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B
mm10_v2_chr2_+_109917639_109917656	0.723136	Hoxa4	ENSMUST00000046548.7|Lgr4|ENSMUSG00000050199.7|leucine-rich repeat-containing G protein-coupled receptor 4 	ENSMUST00000111037.2|Lgr4|ENSMUSG00000050199.7|leucine-rich repeat-containing G protein-coupled receptor 4
mm10_v2_chr10_+_25359798_25359844	0.718503	Hoxa4	ENSMUST00000053748.8|Epb4.1l2|ENSMUSG00000019978.9|erythrocyte protein band 4.1-like 2
mm10_v2_chr6_+_86527312_86527401	0.704756	Hoxa4	ENSMUST00000181928.1|1600020E01Rik|ENSMUSG00000097048.1|RIKEN cDNA 1600020E01 gene
mm10_v2_chr14_-_46390501_46390550	0.696829	Hoxa4	ENSMUST00000100676.2|Bmp4|ENSMUSG00000021835.8|bone morphogenetic protein 4
mm10_v2_chr8_-_84937347_84937367	0.687556	Hoxa4	ENSMUST00000109741.2|Mast1|ENSMUSG00000053693.10|microtubule associated serine/threonine kinase 1 	ENSMUST00000119820.1|Mast1|ENSMUSG00000053693.10|microtubule associated serine/threonine kinase 1
mm10_v2_chr2_+_90885860_90885872	0.676593	Hoxa4	ENSMUST00000111466.2|C1qtnf4|ENSMUSG00000040794.5|C1q and tumor necrosis factor related protein 4
mm10_v2_chr6_+_8949670_8949686	0.673171	Hoxa4	ENSMUST00000060369.3|Nxph1|ENSMUSG00000046178.3|neurexophilin 1
mm10_v2_chrX_-_59166080_59166164	0.66243	Hoxa4	ENSMUST00000119306.1|Fgf13|ENSMUSG00000031137.11|fibroblast growth factor 13
mm10_v2_chr15_-_99820072_99820154	0.66024	Hoxa4	ENSMUST00000109024.2|Lima1|ENSMUSG00000023022.7|LIM domain and actin binding 1
mm10_v2_chr3_+_95164306_95164374	0.657511	Hoxa4	ENSMUST00000107217.1|Sema6c|ENSMUSG00000038777.13|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C 	ENSMUST00000168321.1|Sema6c|ENSMUSG00000038777.13|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C
mm10_v2_chr4_+_109978004_109978053	0.607889	Hoxa4	ENSMUST00000061187.3|Dmrta2|ENSMUSG00000047143.3|doublesex and mab-3 related transcription factor like family A2
mm10_v2_chr9_-_32541589_32541602	0.589651	Hoxa4	ENSMUST00000016231.7|Fli1|ENSMUSG00000016087.7|Friend leukemia integration 1
mm10_v2_chr2_+_70474923_70474923	0.588042	Hoxa4	ENSMUST00000100043.2|Sp5|ENSMUSG00000075304.2|trans-acting transcription factor 5
mm10_v2_chr9_-_110624361_110624439	0.581384	Hoxa4	ENSMUST00000035069.9|Nradd|ENSMUSG00000032491.10|neurotrophin receptor associated death domain
mm10_v2_chr3_+_134236483_134236500	0.5765	Hoxa4	ENSMUST00000181904.1|Cxxc4|ENSMUSG00000044365.10|CXXC finger 4 	ENSMUST00000053048.9|Cxxc4|ENSMUSG00000044365.10|CXXC finger 4
mm10_v2_chr1_-_52091066_52091066	0.570995	Hoxa4	ENSMUST00000105087.1|Gm3940|ENSMUSG00000078291.1|predicted gene 3940
mm10_v2_chr7_+_144838590_144838614	0.5634	Hoxa4	ENSMUST00000105898.1|Fgf3|ENSMUSG00000031074.8|fibroblast growth factor 3
mm10_v2_chr12_-_86079019_86079041	0.549726	Hoxa4	ENSMUST00000003687.6|Tgfb3|ENSMUSG00000021253.6|transforming growth factor, beta 3
mm10_v2_chr9_-_42399915_42399929	0.529487	Hoxa4	ENSMUST00000042190.7|Tecta|ENSMUSG00000037705.7|tectorin alpha
mm10_v2_chr14_-_54409469_54409477	0.529321	Hoxa4	ENSMUST00000000984.4|Slc7a7|ENSMUSG00000000958.5|solute carrier family 7 (cationic amino acid transporter, y+ system), member 7
mm10_v2_chr19_+_55894508_55894534	0.525726	Hoxa4	ENSMUST00000142291.1|Tcf7l2|ENSMUSG00000024985.12|transcription factor 7 like 2, T cell specific, HMG box
mm10_v2_chr10_+_84756055_84756084	0.519711	Hoxa4	ENSMUST00000060397.6|Rfx4|ENSMUSG00000020037.9|regulatory factor X, 4 (influences HLA class II expression)
mm10_v2_chr1_+_165788746_165788769	0.515851	Hoxa4	ENSMUST00000161559.2|Cd247|ENSMUSG00000005763.9|CD247 antigen
mm10_v2_chr4_+_130107556_130107606	0.51514	Hoxa4	ENSMUST00000030563.5|Pef1|ENSMUSG00000028779.10|penta-EF hand domain containing 1
mm10_v2_chrX_+_140956892_140956923	0.511606	Hoxa4	ENSMUST00000112971.1|Atg4a|ENSMUSG00000079418.3|autophagy related 4A, cysteine peptidase
mm10_v2_chr1_-_180193475_180193492	0.496988	Hoxa4	ENSMUST00000160482.1|Adck3|ENSMUSG00000026489.7|aarF domain containing kinase 3 	ENSMUST00000170472.1|Adck3|ENSMUSG00000026489.7|aarF domain containing kinase 3
mm10_v2_chr1_+_45981548_45981548	0.49463	Hoxa4	ENSMUST00000085632.2|Rpl23a-ps1|ENSMUSG00000070896.1|ribosomal protein 23A, pseudogene 1
mm10_v2_chr13_-_102958084_102958173	0.491998	Hoxa4	ENSMUST00000099202.3|Mast4|ENSMUSG00000034751.9|microtubule associated serine/threonine kinase family member 4 	ENSMUST00000172264.1|Mast4|ENSMUSG00000034751.9|microtubule associated serine/threonine kinase family member 4
mm10_v2_chr11_+_52098681_52098796	0.490677	Hoxa4	ENSMUST00000020608.2|Ppp2ca|ENSMUSG00000020349.4|protein phosphatase 2 (formerly 2A), catalytic subunit, alpha isoform
mm10_v2_chr5_+_42067960_42067960	0.4785	Hoxa4	ENSMUST00000087332.4|Gm16223|ENSMUSG00000067285.4|predicted gene 16223
mm10_v2_chr10_+_127420867_127420916	0.471083	Hoxa4	ENSMUST00000064793.6|R3hdm2|ENSMUSG00000025404.9|R3H domain containing 2
mm10_v2_chr12_-_99883429_99883460	0.470005	Hoxa4	ENSMUST00000046485.3|Efcab11|ENSMUSG00000021176.5|EF-hand calcium binding domain 11
mm10_v2_chr14_+_34170640_34170655	0.458188	Hoxa4	ENSMUST00000104925.3|Rpl23a-ps3|ENSMUSG00000078126.3|ribosomal protein L23A, pseudogene 3
mm10_v2_chr1_+_19208914_19208967	0.453384	Hoxa4	ENSMUST00000027059.4|Tfap2b|ENSMUSG00000025927.7|transcription factor AP-2 beta
mm10_v2_chr1_+_165788681_165788728	0.451935	Hoxa4	ENSMUST00000161971.1|Cd247|ENSMUSG00000005763.9|CD247 antigen 	ENSMUST00000178336.1|Cd247|ENSMUSG00000005763.9|CD247 antigen 	ENSMUST00000005907.5|Cd247|ENSMUSG00000005763.9|CD247 antigen 	ENSMUST00000027849.4|Cd247|ENSMUSG00000005763.9|CD247 antigen
mm10_v2_chr1_-_165934900_165935036	0.446776	Hoxa4	ENSMUST00000069609.5|Pou2f1|ENSMUSG00000026565.12|POU domain, class 2, transcription factor 1 	ENSMUST00000111427.2|Pou2f1|ENSMUSG00000026565.12|POU domain, class 2, transcription factor 1 	ENSMUST00000111426.4|Pou2f1|ENSMUSG00000026565.12|POU domain, class 2, transcription factor 1
mm10_v2_chr6_+_134981998_134982002	0.445459	Hoxa4	ENSMUST00000167323.1|Apold1|ENSMUSG00000090698.1|apolipoprotein L domain containing 1
mm10_v2_chr4_+_150237694_150237705	0.426974	Hoxa4	ENSMUST00000141931.1|Eno1|ENSMUSG00000063524.7|enolase 1, alpha non-neuron
mm10_v2_chr13_+_23555023_23555039	0.425243	Hoxa4	ENSMUST00000045301.6|Hist1h1d|ENSMUSG00000052565.5|histone cluster 1, H1d
mm10_v2_chr16_-_76403673_76403717	0.424976	Hoxa4	ENSMUST00000052867.7|Gm9843|ENSMUSG00000050299.7|predicted gene 9843
mm10_v2_chr16_+_10812915_10812915	0.418533	Hoxa4	ENSMUST00000115822.1|Gm11172|ENSMUSG00000079740.1|predicted gene 11172
mm10_v2_chr13_-_107890059_107890073	0.41443	Hoxa4	ENSMUST00000105097.2|Zswim6|ENSMUSG00000032846.9|zinc finger SWIM-type containing 6
mm10_v2_chr3_-_146781351_146781431	0.409894	Hoxa4	ENSMUST00000005164.7|Prkacb|ENSMUSG00000005034.9|protein kinase, cAMP dependent, catalytic, beta
mm10_v2_chrX_+_7579666_7579693	0.405423	Hoxa4	ENSMUST00000115740.1|Foxp3|ENSMUSG00000039521.6|forkhead box P3 	ENSMUST00000115739.1|Foxp3|ENSMUSG00000039521.6|forkhead box P3
mm10_v2_chr4_+_109343029_109343081	0.403036	Hoxa4	ENSMUST00000030281.5|Eps15|ENSMUSG00000028552.7|epidermal growth factor receptor pathway substrate 15
mm10_v2_chr3_-_146682410_146682522	0.402412	Hoxa4	ENSMUST00000124931.1|Samd13|ENSMUSG00000048652.6|sterile alpha motif domain containing 13 	ENSMUST00000147113.1|Samd13|ENSMUSG00000048652.6|sterile alpha motif domain containing 13
mm10_v2_chr17_-_71459300_71459300	0.399639	Hoxa4	ENSMUST00000183937.1|Gm4707|ENSMUSG00000091831.4|predicted gene 4707
mm10_v2_chr17_-_43667015_43667163	0.399091	Hoxa4	ENSMUST00000024705.4|Slc25a27|ENSMUSG00000023912.9|solute carrier family 25, member 27
mm10_v2_chr15_+_18818895_18818947	0.395791	Hoxa4	ENSMUST00000166873.2|Cdh10|ENSMUSG00000022321.9|cadherin 10
mm10_v2_chr4_+_105790534_105790534	0.38674	Hoxa4	ENSMUST00000185012.1|Gm12728|ENSMUSG00000083780.2|predicted gene 12728
mm10_v2_chr19_+_11965817_11965887	0.386311	Hoxa4	ENSMUST00000025590.9|Osbp|ENSMUSG00000024687.10|oxysterol binding protein
mm10_v2_chr13_-_102906046_102906111	0.380101	Hoxa4	ENSMUST00000171791.1|Mast4|ENSMUSG00000034751.9|microtubule associated serine/threonine kinase family member 4
mm10_v2_chr13_-_21832194_21832198	0.374349	Hoxa4	ENSMUST00000102979.1|Hist1h4n|ENSMUSG00000069305.3|histone cluster 1, H4n
mm10_v2_chr6_+_56832059_56832160	0.370763	Hoxa4	ENSMUST00000031795.7|Fkbp9|ENSMUSG00000029781.7|FK506 binding protein 9
mm10_v2_chr17_-_84187939_84187954	0.362232	Hoxa4	ENSMUST00000060366.6|Zfp36l2|ENSMUSG00000045817.8|zinc finger protein 36, C3H type-like 2
mm10_v2_chr9_+_44398176_44398176	0.359272	Hoxa4	ENSMUST00000165839.1|Slc37a4|ENSMUSG00000032114.8|solute carrier family 37 (glucose-6-phosphate transporter), member 4
mm10_v2_chr12_-_56535047_56535106	0.358584	Hoxa4	ENSMUST00000178477.2|Nkx2-1|ENSMUSG00000001496.9|NK2 homeobox 1
mm10_v2_chrX_-_102252154_102252181	0.35646	Hoxa4	ENSMUST00000050551.3|Cited1|ENSMUSG00000051159.10|Cbp/p300-interacting transactivator with Glu/Asp-rich carboxy-terminal domain 1
mm10_v2_chr16_-_64786321_64786321	0.352124	Hoxa4	ENSMUST00000052588.4|Zfp654|ENSMUSG00000047141.4|zinc finger protein 654
mm10_v2_chr9_-_65885024_65885069	0.351114	Hoxa4	ENSMUST00000122410.1|Trip4|ENSMUSG00000032386.9|thyroid hormone receptor interactor 4 	ENSMUST00000117083.1|Trip4|ENSMUSG00000032386.9|thyroid hormone receptor interactor 4
mm10_v2_chr1_-_130729249_130729260	0.350204	Hoxa4	ENSMUST00000171479.1|Pfkfb2|ENSMUSG00000026409.8|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2
mm10_v2_chr11_-_33203588_33203599	0.345911	Hoxa4	ENSMUST00000037746.6|Tlx3|ENSMUSG00000040610.6|T cell leukemia, homeobox 3
mm10_v2_chr14_-_77252327_77252328	0.34463	Hoxa4	ENSMUST00000099431.4|Gm10132|ENSMUSG00000063556.4|predicted gene 10132
mm10_v2_chr15_+_85116829_85116829	0.329183	Hoxa4	ENSMUST00000105085.1|Gm10923|ENSMUSG00000078289.1|predicted gene 10923
mm10_v2_chr8_+_114205590_114205642	0.326263	Hoxa4	ENSMUST00000049509.6|Vat1l|ENSMUSG00000046844.6|vesicle amine transport protein 1 homolog-like (T. californica) 	ENSMUST00000150963.1|Vat1l|ENSMUSG00000046844.6|vesicle amine transport protein 1 homolog-like (T. californica)
mm10_v2_chr13_+_63015167_63015167	0.322628	Hoxa4	ENSMUST00000021911.8|2010111I01Rik|ENSMUSG00000021458.10|RIKEN cDNA 2010111I01 gene
mm10_v2_chr2_-_13271419_13271437	0.321024	Hoxa4	ENSMUST00000028059.2|Rsu1|ENSMUSG00000026727.4|Ras suppressor protein 1
mm10_v2_chrX_-_150814265_150814345	0.311291	Hoxa4	ENSMUST00000026302.6|Maged2|ENSMUSG00000025268.9|melanoma antigen, family D, 2 	ENSMUST00000129768.1|Maged2|ENSMUSG00000025268.9|melanoma antigen, family D, 2 	ENSMUST00000112699.2|Maged2|ENSMUSG00000025268.9|melanoma antigen, family D, 2
mm10_v2_chr15_-_77956658_77956723	0.305565	Hoxa4	ENSMUST00000117725.1|Foxred2|ENSMUSG00000016552.7|FAD-dependent oxidoreductase domain containing 2 	ENSMUST00000016696.6|Foxred2|ENSMUSG00000016552.7|FAD-dependent oxidoreductase domain containing 2
mm10_v2_chr10_+_87859255_87859266	0.303541	Hoxa4	ENSMUST00000105300.2|Igf1|ENSMUSG00000020053.12|insulin-like growth factor 1
mm10_v2_chr18_+_37307445_37307462	0.301165	Hoxa4	ENSMUST00000056712.2|Pcdhb4|ENSMUSG00000045689.2|protocadherin beta 4
mm10_v2_chr19_+_8840519_8840549	0.300088	Hoxa4	ENSMUST00000086058.6|Bscl2|ENSMUSG00000071657.6|Bernardinelli-Seip congenital lipodystrophy 2 homolog (human)
mm10_v2_chr9_+_51621425_51621425	0.296002	Hoxa4	ENSMUST00000089534.4|Gm7293|ENSMUSG00000078308.1|predicted gene 7293
mm10_v2_chr2_-_13271268_13271348	0.290393	Hoxa4	ENSMUST00000137670.1|Rsu1|ENSMUSG00000026727.4|Ras suppressor protein 1 	ENSMUST00000114791.2|Rsu1|ENSMUSG00000026727.4|Ras suppressor protein 1
mm10_v2_chr7_-_45052865_45052914	0.288996	Hoxa4	ENSMUST00000057293.6|Prr12|ENSMUSG00000046574.7|proline rich 12
mm10_v2_chr6_+_135011609_135011653	0.288635	Hoxa4	ENSMUST00000032326.4|Ddx47|ENSMUSG00000030204.4|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 	ENSMUST00000130851.1|Ddx47|ENSMUSG00000030204.4|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 	ENSMUST00000154558.1|Ddx47|ENSMUSG00000030204.4|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47
mm10_v2_chr10_+_127421124_127421203	0.28579	Hoxa4	ENSMUST00000170336.1|R3hdm2|ENSMUSG00000025404.9|R3H domain containing 2
mm10_v2_chr10_-_79908891_79908936	0.281317	Hoxa4	ENSMUST00000165684.1|Med16|ENSMUSG00000013833.9|mediator complex subunit 16 	ENSMUST00000164705.1|Med16|ENSMUSG00000013833.9|mediator complex subunit 16 	ENSMUST00000105378.2|Med16|ENSMUSG00000013833.9|mediator complex subunit 16 	ENSMUST00000170409.1|Med16|ENSMUSG00000013833.9|mediator complex subunit 16
mm10_v2_chrX_+_20687954_20688039	0.280314	Hoxa4	ENSMUST00000115364.1|Cdk16|ENSMUSG00000031065.8|cyclin-dependent kinase 16
mm10_v2_chr5_+_30814722_30814776	0.277959	Hoxa4	ENSMUST00000114724.1|Mapre3|ENSMUSG00000029166.8|microtubule-associated protein, RP/EB family, member 3
mm10_v2_chr14_-_46390576_46390669	0.274962	Hoxa4	ENSMUST00000074077.5|Bmp4|ENSMUSG00000021835.8|bone morphogenetic protein 4
mm10_v2_chr17_-_26886175_26886248	0.267093	Hoxa4	ENSMUST00000108741.2|Gm17382|ENSMUSG00000078838.2|predicted gene, 17382
mm10_v2_chr9_-_29412204_29412277	0.264423	Hoxa4	ENSMUST00000115237.1|Ntm|ENSMUSG00000059974.4|neurotrimin
mm10_v2_chr10_+_87859062_87859094	0.260707	Hoxa4	ENSMUST00000095360.4|Igf1|ENSMUSG00000020053.12|insulin-like growth factor 1
mm10_v2_chr12_-_57546121_57546141	0.256756	Hoxa4	ENSMUST00000044380.6|Foxa1|ENSMUSG00000035451.6|forkhead box A1
mm10_v2_chr18_+_37819543_37819570	0.250802	Hoxa4	ENSMUST00000055935.5|Pcdhga9|ENSMUSG00000023036.8|protocadherin gamma subfamily A, 9
mm10_v2_chr4_-_62519885_62519967	0.235931	Hoxa4	ENSMUST00000107444.1|Alad|ENSMUSG00000028393.4|aminolevulinate, delta-, dehydratase 	ENSMUST00000030090.3|Alad|ENSMUSG00000028393.4|aminolevulinate, delta-, dehydratase
mm10_v2_chrX_+_159840463_159840481	0.232668	Hoxa4	ENSMUST00000112451.1|Sh3kbp1|ENSMUSG00000040990.11|SH3-domain kinase binding protein 1 	ENSMUST00000112453.2|Sh3kbp1|ENSMUSG00000040990.11|SH3-domain kinase binding protein 1
mm10_v2_chr14_+_79515618_79515694	0.229289	Hoxa4	ENSMUST00000110835.1|Elf1|ENSMUSG00000036461.9|E74-like factor 1
mm10_v2_chr10_-_93311073_93311161	0.227716	Hoxa4	ENSMUST00000008542.5|Elk3|ENSMUSG00000008398.8|ELK3, member of ETS oncogene family
mm10_v2_chr8_+_4238815_4238886	0.21461	Hoxa4	ENSMUST00000003027.7|Map2k7|ENSMUSG00000002948.12|mitogen-activated protein kinase kinase 7 	ENSMUST00000110999.1|Map2k7|ENSMUSG00000002948.12|mitogen-activated protein kinase kinase 7
mm10_v2_chr13_-_55362782_55362804	0.210073	Hoxa4	ENSMUST00000021940.7|Lman2|ENSMUSG00000021484.7|lectin, mannose-binding 2
mm10_v2_chr4_+_138775735_138775784	0.206917	Hoxa4	ENSMUST00000030528.2|Pla2g2d|ENSMUSG00000041202.6|phospholipase A2, group IID
mm10_v2_chr12_+_84362029_84362064	0.20682	Hoxa4	ENSMUST00000110278.1|Coq6|ENSMUSG00000021235.7|coenzyme Q6 homolog (yeast) 	ENSMUST00000145522.1|Coq6|ENSMUSG00000021235.7|coenzyme Q6 homolog (yeast)
mm10_v2_chr7_-_142661858_142661880	0.204851	Hoxa4	ENSMUST00000145896.2|Igf2|ENSMUSG00000048583.10|insulin-like growth factor 2
mm10_v2_chr3_-_88177671_88177785	0.200184	Hoxa4	ENSMUST00000181837.1|1700113A16Rik|ENSMUSG00000096935.1|RIKEN cDNA 1700113A16 gene
mm10_v2_chr17_+_24850654_24850683	0.196768	Hoxa4	ENSMUST00000130989.1|Hagh|ENSMUSG00000024158.11|hydroxyacyl glutathione hydrolase 	ENSMUST00000024974.9|Hagh|ENSMUSG00000024158.11|hydroxyacyl glutathione hydrolase
mm10_v2_chr1_+_180111339_180111339	0.185671	Hoxa4	ENSMUST00000145181.1|Cdc42bpa|ENSMUSG00000026490.11|CDC42 binding protein kinase alpha
mm10_v2_chr18_+_37341702_37341728	0.179599	Hoxa4	ENSMUST00000053037.3|Pcdhb7|ENSMUSG00000045062.3|protocadherin beta 7
mm10_v2_chr12_+_55384222_55384261	0.172491	Hoxa4	ENSMUST00000163070.1|Psma6|ENSMUSG00000021024.8|proteasome (prosome, macropain) subunit, alpha type 6
mm10_v2_chr8_+_4238733_4238767	0.164856	Hoxa4	ENSMUST00000110998.2|Map2k7|ENSMUSG00000002948.12|mitogen-activated protein kinase kinase 7 	ENSMUST00000062686.4|Map2k7|ENSMUSG00000002948.12|mitogen-activated protein kinase kinase 7
mm10_v2_chr6_+_124916863_124916863	0.160179	Hoxa4	ENSMUST00000069553.2|A230083G16Rik|ENSMUSG00000055818.2|RIKEN cDNA A230083G16 gene
mm10_v2_chr13_+_94875600_94875611	0.155765	Hoxa4	ENSMUST00000022195.10|Otp|ENSMUSG00000021685.10|orthopedia homolog (Drosophila)
mm10_v2_chr1_-_74601345_74601402	0.147798	Hoxa4	ENSMUST00000136078.1|Rnf25|ENSMUSG00000026171.6|ring finger protein 25 	ENSMUST00000132081.1|Rnf25|ENSMUSG00000026171.6|ring finger protein 25 	ENSMUST00000113721.1|Rnf25|ENSMUSG00000026171.6|ring finger protein 25 	ENSMUST00000027357.5|Rnf25|ENSMUSG00000026171.6|ring finger protein 25
mm10_v2_chrM_+_5319_5333	0.14401	Hoxa4	ENSMUST00000082402.1|mt-Co1|ENSMUSG00000064351.1|mitochondrially encoded cytochrome c oxidase I
mm10_v2_chrX_-_20950597_20950613	0.133257	Hoxa4	ENSMUST00000009550.7|Elk1|ENSMUSG00000009406.7|ELK1, member of ETS oncogene family
mm10_v2_chr8_+_106059562_106059623	0.130388	Hoxa4	ENSMUST00000109308.1|Nfatc3|ENSMUSG00000031902.9|nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 3
mm10_v2_chr7_-_127260677_127260709	0.12793	Hoxa4	ENSMUST00000035276.4|Dctpp1|ENSMUSG00000042462.4|dCTP pyrophosphatase 1
mm10_v2_chr10_+_4611971_4612021	0.123394	Hoxa4	ENSMUST00000105590.1|Esr1|ENSMUSG00000019768.10|estrogen receptor 1 (alpha) 	ENSMUST00000067086.7|Esr1|ENSMUSG00000019768.10|estrogen receptor 1 (alpha)
mm10_v2_chr9_-_49798729_49798855	0.122817	Hoxa4	ENSMUST00000166811.2|Ncam1|ENSMUSG00000039542.9|neural cell adhesion molecule 1
mm10_v2_chr16_+_4639941_4639978	0.114346	Hoxa4	ENSMUST00000038770.3|Vasn|ENSMUSG00000039646.5|vasorin
mm10_v2_chr1_-_67038824_67038872	0.113158	Hoxa4	ENSMUST00000119559.1|Lancl1|ENSMUSG00000026000.10|LanC (bacterial lantibiotic synthetase component C)-like 1 	ENSMUST00000149996.1|Lancl1|ENSMUSG00000026000.10|LanC (bacterial lantibiotic synthetase component C)-like 1 	ENSMUST00000027149.5|Lancl1|ENSMUSG00000026000.10|LanC (bacterial lantibiotic synthetase component C)-like 1 	ENSMUST00000113979.3|Lancl1|ENSMUSG00000026000.10|LanC (bacterial lantibiotic synthetase component C)-like 1
mm10_v2_chr10_+_102158858_102158889	0.105202	Hoxa4	ENSMUST00000138522.1|Mgat4c|ENSMUSG00000019888.9|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative) 	ENSMUST00000163753.1|Mgat4c|ENSMUSG00000019888.9|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative) 	ENSMUST00000138016.1|Mgat4c|ENSMUSG00000019888.9|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative)
mm10_v2_chr10_-_92162753_92162765	0.103782	Hoxa4	ENSMUST00000182197.1|Rmst|ENSMUSG00000097348.2|rhabdomyosarcoma 2 associated transcript (non-coding RNA)
mm10_v2_chr3_-_130730310_130730352	0.101502	Hoxa4	ENSMUST00000062601.7|Rpl34|ENSMUSG00000062006.6|ribosomal protein L34
mm10_v2_chr11_+_103966716_103966871	0.100419	Hoxa4	ENSMUST00000057921.3|Arf2|ENSMUSG00000062421.7|ADP-ribosylation factor 2 	ENSMUST00000063347.5|Arf2|ENSMUSG00000062421.7|ADP-ribosylation factor 2
mm10_v2_chr7_-_34654342_34654398	0.0981802	Hoxa4	ENSMUST00000108069.1|Kctd15|ENSMUSG00000030499.3|potassium channel tetramerisation domain containing 15
mm10_v2_chr12_+_29528382_29528468	0.0960451	Hoxa4	ENSMUST00000049784.9|Myt1l|ENSMUSG00000061911.8|myelin transcription factor 1-like
mm10_v2_chr3_-_61365951_61365951	0.0956558	Hoxa4	ENSMUST00000066298.2|B430305J03Rik|ENSMUSG00000053706.2|RIKEN cDNA B430305J03 gene
mm10_v2_chr6_+_106769120_106769234	0.0922578	Hoxa4	ENSMUST00000113247.1|Trnt1|ENSMUSG00000013736.10|tRNA nucleotidyl transferase, CCA-adding, 1 	ENSMUST00000113249.1|Trnt1|ENSMUSG00000013736.10|tRNA nucleotidyl transferase, CCA-adding, 1 	ENSMUST00000057578.9|Trnt1|ENSMUSG00000013736.10|tRNA nucleotidyl transferase, CCA-adding, 1 	ENSMUST00000113248.1|Trnt1|ENSMUSG00000013736.10|tRNA nucleotidyl transferase, CCA-adding, 1
mm10_v2_chr12_+_84361636_84361657	0.0907802	Hoxa4	ENSMUST00000110276.1|Coq6|ENSMUSG00000021235.7|coenzyme Q6 homolog (yeast)
mm10_v2_chr17_+_24850515_24850591	0.0889259	Hoxa4	ENSMUST00000154363.1|Hagh|ENSMUSG00000024158.11|hydroxyacyl glutathione hydrolase 	ENSMUST00000169200.1|Hagh|ENSMUSG00000024158.11|hydroxyacyl glutathione hydrolase
mm10_v2_chr11_+_94328242_94328261	0.0865	Hoxa4	ENSMUST00000021227.5|Ankrd40|ENSMUSG00000020864.7|ankyrin repeat domain 40
mm10_v2_chr9_+_72274966_72275013	0.0822577	Hoxa4	ENSMUST00000183410.1|Zfp280d|ENSMUSG00000038535.11|zinc finger protein 280D
mm10_v2_chr9_-_50555170_50555183	0.068246	Hoxa4	ENSMUST00000119103.1|Bco2|ENSMUSG00000032066.9|beta-carotene oxygenase 2
mm10_v2_chr3_+_89459118_89459214	0.0674728	Hoxa4	ENSMUST00000029564.5|Pmvk|ENSMUSG00000027952.10|phosphomevalonate kinase
mm10_v2_chr12_+_65075582_65075617	0.0619283	Hoxa4	ENSMUST00000058889.4|Fancm|ENSMUSG00000055884.7|Fanconi anemia, complementation group M
mm10_v2_chr13_+_89540636_89540678	0.0509453	Hoxa4	ENSMUST00000022108.7|Hapln1|ENSMUSG00000021613.8|hyaluronan and proteoglycan link protein 1
mm10_v2_chr6_+_43265582_43265681	0.0497411	Hoxa4	ENSMUST00000031750.7|Arhgef5|ENSMUSG00000033542.7|Rho guanine nucleotide exchange factor (GEF) 5
mm10_v2_chr3_+_41564880_41564933	0.0446932	Hoxa4	ENSMUST00000168086.1|Phf17|ENSMUSG00000025764.8|PHD finger protein 17
mm10_v2_chr3_+_94837533_94837567	0.0410698	Hoxa4	ENSMUST00000107270.2|Pogz|ENSMUSG00000038902.8|pogo transposable element with ZNF domain
mm10_v2_chr4_-_132510493_132510509	0.0407888	Hoxa4	ENSMUST00000030724.8|Sesn2|ENSMUSG00000028893.8|sestrin 2
mm10_v2_chr5_-_137530990_137531049	0.0403917	Hoxa4	ENSMUST00000132525.1|Gnb2|ENSMUSG00000029713.9|guanine nucleotide binding protein (G protein), beta 2
mm10_v2_chr4_-_83486453_83486478	0.0377461	Hoxa4	ENSMUST00000107214.2|Psip1|ENSMUSG00000028484.10|PC4 and SFRS1 interacting protein 1 	ENSMUST00000107215.2|Psip1|ENSMUSG00000028484.10|PC4 and SFRS1 interacting protein 1 	ENSMUST00000030207.8|Psip1|ENSMUSG00000028484.10|PC4 and SFRS1 interacting protein 1
mm10_v2_chrX_+_48623737_48623790	0.0306829	Hoxa4	ENSMUST00000114936.1|Slc25a14|ENSMUSG00000031105.10|solute carrier family 25 (mitochondrial carrier, brain), member 14
mm10_v2_chr7_-_122101735_122101886	0.0294005	Hoxa4	ENSMUST00000139456.1|Ndufab1|ENSMUSG00000030869.5|NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1 	ENSMUST00000106471.2|Ndufab1|ENSMUSG00000030869.5|NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1 	ENSMUST00000123296.1|Ndufab1|ENSMUSG00000030869.5|NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1 	ENSMUST00000033157.3|Ndufab1|ENSMUSG00000030869.5|NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1
mm10_v2_chr18_+_23752333_23752401	0.0271376	Hoxa4	ENSMUST00000170802.1|Mapre2|ENSMUSG00000024277.8|microtubule-associated protein, RP/EB family, member 2 	ENSMUST00000155708.1|Mapre2|ENSMUSG00000024277.8|microtubule-associated protein, RP/EB family, member 2 	ENSMUST00000118826.2|Mapre2|ENSMUSG00000024277.8|microtubule-associated protein, RP/EB family, member 2
mm10_v2_chr2_+_80638798_80638834	0.0198139	Hoxa4	ENSMUST00000028382.6|Nup35|ENSMUSG00000026999.8|nucleoporin 35 	ENSMUST00000124377.1|Nup35|ENSMUSG00000026999.8|nucleoporin 35
mm10_v2_chr17_+_43667389_43667425	0.0195691	Hoxa4	ENSMUST00000170988.1|Cyp39a1|ENSMUSG00000023963.9|cytochrome P450, family 39, subfamily a, polypeptide 1
mm10_v2_chr9_+_75051977_75052082	0.0163573	Hoxa4	ENSMUST00000170310.1|Arpp19|ENSMUSG00000007656.7|cAMP-regulated phosphoprotein 19 	ENSMUST00000166549.1|Arpp19|ENSMUSG00000007656.7|cAMP-regulated phosphoprotein 19
mm10_v2_chr14_+_46832127_46832151	0.0140302	Hoxa4	ENSMUST00000068532.8|Cgrrf1|ENSMUSG00000055128.8|cell growth regulator with ring finger domain 1
mm10_v2_chr3_+_94837702_94837723	0.00979186	Hoxa4	ENSMUST00000107266.1|Pogz|ENSMUSG00000038902.8|pogo transposable element with ZNF domain 	ENSMUST00000042402.5|Pogz|ENSMUSG00000038902.8|pogo transposable element with ZNF domain 	ENSMUST00000107269.1|Pogz|ENSMUSG00000038902.8|pogo transposable element with ZNF domain
mm10_v2_chr5_-_137314175_137314241	0.00946109	Hoxa4	ENSMUST00000024119.9|Trip6|ENSMUSG00000023348.10|thyroid hormone receptor interactor 6
mm10_v2_chr1_-_158356258_158356313	0.00806107	Hoxa4	ENSMUST00000004133.8|Brinp2|ENSMUSG00000004031.8|bone morphogenic protein/retinoic acid inducible neural-specific 2
mm10_v2_chr1_+_93478964_93479108	0.00776389	Hoxa4	ENSMUST00000027495.8|Sept2|ENSMUSG00000026276.11|septin 2 	ENSMUST00000136182.1|Sept2|ENSMUSG00000026276.11|septin 2 	ENSMUST00000131175.2|Sept2|ENSMUSG00000026276.11|septin 2 	ENSMUST00000179353.1|Sept2|ENSMUSG00000026276.11|septin 2 	ENSMUST00000172165.1|Sept2|ENSMUSG00000026276.11|septin 2 	ENSMUST00000153826.1|Sept2|ENSMUSG00000026276.11|septin 2 	ENSMUST00000129211.1|Sept2|ENSMUSG00000026276.11|septin 2 	ENSMUST00000168776.1|Sept2|ENSMUSG00000026276.11|septin 2 	ENSMUST00000112912.1|Sept2|ENSMUSG00000026276.11|septin 2
mm10_v2_chr2_+_147187424_147187424	0.00728864	Hoxa4	ENSMUST00000144411.1|6430503K07Rik|ENSMUSG00000053545.6|RIKEN cDNA 6430503K07 gene
mm10_v2_chr7_+_64185459_64185601	0.00214543	Hoxa4	ENSMUST00000177102.2|Trpm1|ENSMUSG00000030523.12|transient receptor potential cation channel, subfamily M, member 1 	ENSMUST00000107519.1|Trpm1|ENSMUSG00000030523.12|transient receptor potential cation channel, subfamily M, member 1 	ENSMUST00000137650.1|Trpm1|ENSMUSG00000030523.12|transient receptor potential cation channel, subfamily M, member 1 	ENSMUST00000032737.5|Trpm1|ENSMUSG00000030523.12|transient receptor potential cation channel, subfamily M, member 1 	ENSMUST00000107515.1|Trpm1|ENSMUSG00000030523.12|transient receptor potential cation channel, subfamily M, member 1 	ENSMUST00000144996.1|Trpm1|ENSMUSG00000030523.12|transient receptor potential cation channel, subfamily M, member 1
