mm10_v2_chr19_-_57197435_57197460	2.07056	Hoxa9_Hoxb9	ENSMUST00000111550.1|Ablim1|ENSMUSG00000025085.10|actin-binding LIM protein 1
mm10_v2_chr19_-_57197377_57197417	2.02746	Hoxa9_Hoxb9	ENSMUST00000111546.1|Ablim1|ENSMUSG00000025085.10|actin-binding LIM protein 1
mm10_v2_chr5_-_73191848_73191922	1.77917	Hoxa9_Hoxb9	ENSMUST00000176910.1|Fryl|ENSMUSG00000070733.7|furry homolog-like (Drosophila)
mm10_v2_chr6_+_49822710_49822727	1.43359	Hoxa9_Hoxb9	ENSMUST00000031843.6|Npy|ENSMUSG00000029819.6|neuropeptide Y
mm10_v2_chr13_+_16014457_16014475	1.06262	Hoxa9_Hoxb9	ENSMUST00000164993.1|Inhba|ENSMUSG00000041324.7|inhibin beta-A
mm10_v2_chr19_-_57197496_57197536	0.923173	Hoxa9_Hoxb9	ENSMUST00000111544.1|Ablim1|ENSMUSG00000025085.10|actin-binding LIM protein 1
mm10_v2_chr6_-_143947092_143947111	0.793146	Hoxa9_Hoxb9	ENSMUST00000144289.1|Sox5|ENSMUSG00000041540.10|SRY-box containing gene 5 	ENSMUST00000111748.1|Sox5|ENSMUSG00000041540.10|SRY-box containing gene 5
mm10_v2_chr5_-_66514815_66514837	0.763355	Hoxa9_Hoxb9	ENSMUST00000161879.1|Apbb2|ENSMUSG00000029207.10|amyloid beta (A4) precursor protein-binding, family B, member 2 	ENSMUST00000159357.1|Apbb2|ENSMUSG00000029207.10|amyloid beta (A4) precursor protein-binding, family B, member 2
mm10_v2_chr9_+_92309362_92309386	0.73579	Hoxa9_Hoxb9	ENSMUST00000098477.1|1700057G04Rik|ENSMUSG00000074139.2|RIKEN cDNA 1700057G04 gene 	ENSMUST00000150594.1|1700057G04Rik|ENSMUSG00000074139.2|RIKEN cDNA 1700057G04 gene
mm10_v2_chr6_-_143947061_143947088	0.732935	Hoxa9_Hoxb9	ENSMUST00000124233.1|Sox5|ENSMUSG00000041540.10|SRY-box containing gene 5
mm10_v2_chr3_+_108591279_108591414	0.718585	Hoxa9_Hoxb9	ENSMUST00000051145.8|Wdr47|ENSMUSG00000040389.9|WD repeat domain 47 	ENSMUST00000139626.1|Wdr47|ENSMUSG00000040389.9|WD repeat domain 47
mm10_v2_chr19_-_57197556_57197631	0.644681	Hoxa9_Hoxb9	ENSMUST00000099294.2|Ablim1|ENSMUSG00000025085.10|actin-binding LIM protein 1
mm10_v2_chr3_+_138065052_138065078	0.63149	Hoxa9_Hoxb9	ENSMUST00000163080.2|1110002E22Rik|ENSMUSG00000090066.2|RIKEN cDNA 1110002E22 gene
mm10_v2_chr19_-_7341848_7341863	0.580423	Hoxa9_Hoxb9	ENSMUST00000171393.1|Mark2|ENSMUSG00000024969.9|MAP/microtubule affinity-regulating kinase 2
mm10_v2_chr19_-_50678642_50678702	0.547813	Hoxa9_Hoxb9	ENSMUST00000072685.6|Sorcs1|ENSMUSG00000043531.9|VPS10 domain receptor protein SORCS 1 	ENSMUST00000164039.2|Sorcs1|ENSMUSG00000043531.9|VPS10 domain receptor protein SORCS 1
mm10_v2_chr19_+_44203265_44203288	0.532398	Hoxa9_Hoxb9	ENSMUST00000026220.5|Scd3|ENSMUSG00000025202.7|stearoyl-coenzyme A desaturase 3
mm10_v2_chr19_-_56548013_56548046	0.500376	Hoxa9_Hoxb9	ENSMUST00000182059.1|Dclre1a|ENSMUSG00000025077.7|DNA cross-link repair 1A, PSO2 homolog (S. cerevisiae)
mm10_v2_chr7_+_56050135_56050217	0.490262	Hoxa9_Hoxb9	ENSMUST00000076226.6|Herc2|ENSMUSG00000030451.9|hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and RCC1 (CHC1)-like domain (RLD) 2
mm10_v2_chr13_-_91388079_91388090	0.459837	Hoxa9_Hoxb9	ENSMUST00000181054.1|A830009L08Rik|ENSMUSG00000097182.1|RIKEN cDNA A830009L08 gene
mm10_v2_chr1_+_66386968_66386999	0.447965	Hoxa9_Hoxb9	ENSMUST00000145419.1|Map2|ENSMUSG00000015222.11|microtubule-associated protein 2
mm10_v2_chr6_+_104492790_104492965	0.393391	Hoxa9_Hoxb9	ENSMUST00000161446.1|Cntn6|ENSMUSG00000030092.8|contactin 6 	ENSMUST00000161070.1|Cntn6|ENSMUSG00000030092.8|contactin 6 	ENSMUST00000089215.5|Cntn6|ENSMUSG00000030092.8|contactin 6
mm10_v2_chr7_-_127449109_127449166	0.382711	Hoxa9_Hoxb9	ENSMUST00000053392.4|Zfp689|ENSMUSG00000048921.5|zinc finger protein 689
mm10_v2_chr3_-_96905294_96905346	0.377547	Hoxa9_Hoxb9	ENSMUST00000029738.7|Gpr89|ENSMUSG00000028096.7|G protein-coupled receptor 89
mm10_v2_chr7_+_70388305_70388305	0.367879	Hoxa9_Hoxb9	ENSMUST00000080024.5|B130024G19Rik|ENSMUSG00000062383.5|RIKEN cDNA B130024G19 gene
mm10_v2_chr7_-_127448993_127449077	0.367828	Hoxa9_Hoxb9	ENSMUST00000106299.1|Zfp689|ENSMUSG00000048921.5|zinc finger protein 689
mm10_v2_chr7_+_43690418_43690418	0.366726	Hoxa9_Hoxb9	ENSMUST00000056329.6|Klk14|ENSMUSG00000044737.6|kallikrein related-peptidase 14
mm10_v2_chr1_-_172027269_172027313	0.36241	Hoxa9_Hoxb9	ENSMUST00000027837.6|Vangl2|ENSMUSG00000026556.9|vang-like 2 (van gogh, Drosophila) 	ENSMUST00000111264.1|Vangl2|ENSMUSG00000026556.9|vang-like 2 (van gogh, Drosophila)
mm10_v2_chr4_+_74013442_74013674	0.359451	Hoxa9_Hoxb9	ENSMUST00000098006.2|Frmd3|ENSMUSG00000049122.11|FERM domain containing 3 	ENSMUST00000084474.5|Frmd3|ENSMUSG00000049122.11|FERM domain containing 3
mm10_v2_chr18_-_56975333_56975376	0.34472	Hoxa9_Hoxb9	ENSMUST00000139243.2|C330018D20Rik|ENSMUSG00000024592.9|RIKEN cDNA C330018D20 gene 	ENSMUST00000025488.8|C330018D20Rik|ENSMUSG00000024592.9|RIKEN cDNA C330018D20 gene
mm10_v2_chr19_+_56548254_56548283	0.305971	Hoxa9_Hoxb9	ENSMUST00000071423.5|Nhlrc2|ENSMUSG00000025078.8|NHL repeat containing 2
mm10_v2_chr18_-_31447383_31447415	0.291276	Hoxa9_Hoxb9	ENSMUST00000025110.3|Syt4|ENSMUSG00000024261.5|synaptotagmin IV
mm10_v2_chr17_-_15826521_15826590	0.289518	Hoxa9_Hoxb9	ENSMUST00000170578.1|Rgmb|ENSMUSG00000048027.7|RGM domain family, member B
mm10_v2_chr14_-_70323783_70323814	0.280161	Hoxa9_Hoxb9	ENSMUST00000151011.1|Slc39a14|ENSMUSG00000022094.9|solute carrier family 39 (zinc transporter), member 14
mm10_v2_chr14_+_20674311_20674371	0.27414	Hoxa9_Hoxb9	ENSMUST00000048657.8|Sec24c|ENSMUSG00000039367.9|Sec24 related gene family, member C (S. cerevisiae)
mm10_v2_chr2_-_27463994_27464116	0.269106	Hoxa9_Hoxb9	ENSMUST00000164296.1|Brd3|ENSMUSG00000026918.10|bromodomain containing 3
mm10_v2_chr7_-_130772652_130772652	0.252643	Hoxa9_Hoxb9	ENSMUST00000057134.4|Etos1|ENSMUSG00000050189.4|ectopic ossification 1
mm10_v2_chr17_-_45572495_45572555	0.251301	Hoxa9_Hoxb9	ENSMUST00000130406.1|Hsp90ab1|ENSMUSG00000023944.8|heat shock protein 90 alpha (cytosolic), class B member 1
mm10_v2_chr1_+_194619815_194619833	0.251265	Hoxa9_Hoxb9	ENSMUST00000027952.5|Plxna2|ENSMUSG00000026640.6|plexin A2
mm10_v2_chrX_+_159303266_159303281	0.242935	Hoxa9_Hoxb9	ENSMUST00000112491.1|Rps6ka3|ENSMUSG00000031309.9|ribosomal protein S6 kinase polypeptide 3
mm10_v2_chrX_-_134541847_134541900	0.226247	Hoxa9_Hoxb9	ENSMUST00000054213.4|Timm8a1|ENSMUSG00000048007.4|translocase of inner mitochondrial membrane 8A1
mm10_v2_chr2_-_45112890_45113010	0.220321	Hoxa9_Hoxb9	ENSMUST00000076836.6|Zeb2|ENSMUSG00000026872.10|zinc finger E-box binding homeobox 2
mm10_v2_chr11_-_109298066_109298079	0.219988	Hoxa9_Hoxb9	ENSMUST00000106706.1|Rgs9|ENSMUSG00000020599.7|regulator of G-protein signaling 9
mm10_v2_chr1_+_24005505_24005505	0.201461	Hoxa9_Hoxb9	ENSMUST00000181961.1|Gm26524|ENSMUSG00000096985.1|predicted gene, 26524
mm10_v2_chr8_+_93810832_93810843	0.186973	Hoxa9_Hoxb9	ENSMUST00000034198.8|Gnao1|ENSMUSG00000031748.9|guanine nucleotide binding protein, alpha O 	ENSMUST00000125716.1|Gnao1|ENSMUSG00000031748.9|guanine nucleotide binding protein, alpha O
mm10_v2_chr19_-_45812291_45812307	0.183967	Hoxa9_Hoxb9	ENSMUST00000086993.4|Kcnip2|ENSMUSG00000025221.9|Kv channel-interacting protein 2
mm10_v2_chr4_+_115737754_115737810	0.171167	Hoxa9_Hoxb9	ENSMUST00000106522.2|Efcab14|ENSMUSG00000034210.7|EF-hand calcium binding domain 14
mm10_v2_chr18_-_31317043_31317133	0.171038	Hoxa9_Hoxb9	ENSMUST00000139924.1|Rit2|ENSMUSG00000057455.6|Ras-like without CAAX 2 	ENSMUST00000153060.1|Rit2|ENSMUSG00000057455.6|Ras-like without CAAX 2
mm10_v2_chr4_+_44012661_44012694	0.169908	Hoxa9_Hoxb9	ENSMUST00000107849.3|Clta|ENSMUSG00000028478.12|clathrin, light polypeptide (Lca) 	ENSMUST00000107851.3|Clta|ENSMUSG00000028478.12|clathrin, light polypeptide (Lca) 	ENSMUST00000107845.3|Clta|ENSMUSG00000028478.12|clathrin, light polypeptide (Lca)
mm10_v2_chr4_+_44012638_44012660	0.163375	Hoxa9_Hoxb9	ENSMUST00000107847.3|Clta|ENSMUSG00000028478.12|clathrin, light polypeptide (Lca) 	ENSMUST00000170241.1|Clta|ENSMUSG00000028478.12|clathrin, light polypeptide (Lca)
mm10_v2_chrX_+_159840463_159840481	0.155673	Hoxa9_Hoxb9	ENSMUST00000112451.1|Sh3kbp1|ENSMUSG00000040990.11|SH3-domain kinase binding protein 1 	ENSMUST00000112453.2|Sh3kbp1|ENSMUSG00000040990.11|SH3-domain kinase binding protein 1
mm10_v2_chr7_+_110768169_110768206	0.15132	Hoxa9_Hoxb9	ENSMUST00000170374.1|Ampd3|ENSMUSG00000005686.10|adenosine monophosphate deaminase 3
mm10_v2_chr19_+_33822908_33822908	0.150218	Hoxa9_Hoxb9	ENSMUST00000042061.6|Gm5519|ENSMUSG00000037603.6|predicted pseudogene 5519
mm10_v2_chr5_-_145201829_145201873	0.150118	Hoxa9_Hoxb9	ENSMUST00000162220.1|Zkscan14|ENSMUSG00000029627.11|zinc finger with KRAB and SCAN domains 14 	ENSMUST00000031632.8|Zkscan14|ENSMUSG00000029627.11|zinc finger with KRAB and SCAN domains 14
mm10_v2_chr7_+_28277706_28277770	0.146563	Hoxa9_Hoxb9	ENSMUST00000094651.2|Eid2b|ENSMUSG00000070705.2|EP300 interacting inhibitor of differentiation 2B
mm10_v2_chr7_-_30232186_30232272	0.144085	Hoxa9_Hoxb9	ENSMUST00000006254.5|Tbcb|ENSMUSG00000006095.6|tubulin folding cofactor B
mm10_v2_chr16_-_17531019_17531136	0.136967	Hoxa9_Hoxb9	ENSMUST00000142666.1|Thap7|ENSMUSG00000022760.9|THAP domain containing 7 	ENSMUST00000100125.3|Thap7|ENSMUSG00000022760.9|THAP domain containing 7
mm10_v2_chr8_+_9977707_9977725	0.133934	Hoxa9_Hoxb9	ENSMUST00000139793.1|Abhd13|ENSMUSG00000040396.6|abhydrolase domain containing 13 	ENSMUST00000048216.5|Abhd13|ENSMUSG00000040396.6|abhydrolase domain containing 13
mm10_v2_chr2_-_181599128_181599235	0.128676	Hoxa9_Hoxb9	ENSMUST00000060173.8|Samd10|ENSMUSG00000038605.11|sterile alpha motif domain containing 10
mm10_v2_chrX_-_72918284_72918396	0.128231	Hoxa9_Hoxb9	ENSMUST00000152200.1|Cetn2|ENSMUSG00000031347.6|centrin 2
mm10_v2_chr7_-_141434532_141434605	0.12739	Hoxa9_Hoxb9	ENSMUST00000133021.1|Slc25a22|ENSMUSG00000019082.11|solute carrier family 25 (mitochondrial carrier, glutamate), member 22 	ENSMUST00000106007.3|Slc25a22|ENSMUSG00000019082.11|solute carrier family 25 (mitochondrial carrier, glutamate), member 22 	ENSMUST00000150026.1|Slc25a22|ENSMUSG00000019082.11|solute carrier family 25 (mitochondrial carrier, glutamate), member 22 	ENSMUST00000133206.2|Slc25a22|ENSMUSG00000019082.11|solute carrier family 25 (mitochondrial carrier, glutamate), member 22
mm10_v2_chr5_+_31452427_31452452	0.119395	Hoxa9_Hoxb9	ENSMUST00000076264.4|Zfp512|ENSMUSG00000062761.4|zinc finger protein 512
mm10_v2_chr18_+_37655891_37655915	0.113966	Hoxa9_Hoxb9	ENSMUST00000097608.2|3222401L13Rik|ENSMUSG00000073590.2|RIKEN cDNA 3222401L13 gene
mm10_v2_chr8_-_111992258_111992302	0.108082	Hoxa9_Hoxb9	ENSMUST00000034427.5|Adat1|ENSMUSG00000031949.11|adenosine deaminase, tRNA-specific 1 	ENSMUST00000139820.1|Adat1|ENSMUSG00000031949.11|adenosine deaminase, tRNA-specific 1
mm10_v2_chr9_+_64235201_64235201	0.107562	Hoxa9_Hoxb9	ENSMUST00000039011.3|Uchl4|ENSMUSG00000035337.3|ubiquitin carboxyl-terminal esterase L4
mm10_v2_chr4_+_115737738_115737752	0.102927	Hoxa9_Hoxb9	ENSMUST00000106525.2|Efcab14|ENSMUSG00000034210.7|EF-hand calcium binding domain 14
mm10_v2_chr2_+_152105722_152105739	0.102417	Hoxa9_Hoxb9	ENSMUST00000099225.2|Srxn1|ENSMUSG00000032802.7|sulfiredoxin 1 homolog (S. cerevisiae)
mm10_v2_chr4_-_49597860_49597892	0.102398	Hoxa9_Hoxb9	ENSMUST00000042750.2|Tmem246|ENSMUSG00000039611.2|transmembrane protein 246
mm10_v2_chr2_+_32395896_32395896	0.0944071	Hoxa9_Hoxb9	ENSMUST00000028162.3|Ptges2|ENSMUSG00000026820.3|prostaglandin E synthase 2
mm10_v2_chr9_-_60687459_60687672	0.0906163	Hoxa9_Hoxb9	ENSMUST00000114032.1|Lrrc49|ENSMUSG00000047766.9|leucine rich repeat containing 49 	ENSMUST00000166168.1|Lrrc49|ENSMUSG00000047766.9|leucine rich repeat containing 49 	ENSMUST00000132366.1|Lrrc49|ENSMUSG00000047766.9|leucine rich repeat containing 49
mm10_v2_chr7_-_38271310_38271390	0.0876728	Hoxa9_Hoxb9	ENSMUST00000032585.6|Pop4|ENSMUSG00000030423.6|processing of precursor 4, ribonuclease P/MRP family, (S. cerevisiae)
mm10_v2_chr2_-_33087169_33087253	0.085886	Hoxa9_Hoxb9	ENSMUST00000102810.3|Garnl3|ENSMUSG00000038860.9|GTPase activating RANGAP domain-like 3
mm10_v2_chr2_-_33086366_33086447	0.0850162	Hoxa9_Hoxb9	ENSMUST00000049618.2|Garnl3|ENSMUSG00000038860.9|GTPase activating RANGAP domain-like 3
mm10_v2_chr11_+_67078293_67078307	0.083259	Hoxa9_Hoxb9	ENSMUST00000108689.1|Myh3|ENSMUSG00000020908.8|myosin, heavy polypeptide 3, skeletal muscle, embryonic 	ENSMUST00000165221.1|Myh3|ENSMUSG00000020908.8|myosin, heavy polypeptide 3, skeletal muscle, embryonic 	ENSMUST00000007301.7|Myh3|ENSMUSG00000020908.8|myosin, heavy polypeptide 3, skeletal muscle, embryonic
mm10_v2_chr19_-_56548122_56548222	0.0819528	Hoxa9_Hoxb9	ENSMUST00000026063.5|Dclre1a|ENSMUSG00000025077.7|DNA cross-link repair 1A, PSO2 homolog (S. cerevisiae) 	ENSMUST00000182276.1|Dclre1a|ENSMUSG00000025077.7|DNA cross-link repair 1A, PSO2 homolog (S. cerevisiae)
mm10_v2_chr9_+_121366958_121367042	0.0799746	Hoxa9_Hoxb9	ENSMUST00000045903.6|Trak1|ENSMUSG00000032536.9|trafficking protein, kinesin binding 1
mm10_v2_chr18_+_37400845_37400886	0.0730346	Hoxa9_Hoxb9	ENSMUST00000057228.1|Pcdhb9|ENSMUSG00000051242.1|protocadherin beta 9
mm10_v2_chr11_-_109298090_109298118	0.0722728	Hoxa9_Hoxb9	ENSMUST00000106704.2|Rgs9|ENSMUSG00000020599.7|regulator of G-protein signaling 9
mm10_v2_chr3_+_84952146_84952186	0.0711919	Hoxa9_Hoxb9	ENSMUST00000029727.7|Fbxw7|ENSMUSG00000028086.8|F-box and WD-40 domain protein 7
mm10_v2_chr15_-_79062866_79062941	0.0705055	Hoxa9_Hoxb9	ENSMUST00000151889.1|Ankrd54|ENSMUSG00000033055.4|ankyrin repeat domain 54 	ENSMUST00000040676.4|Ankrd54|ENSMUSG00000033055.4|ankyrin repeat domain 54
mm10_v2_chr6_+_51523901_51523941	0.070035	Hoxa9_Hoxb9	ENSMUST00000049152.8|Snx10|ENSMUSG00000038301.9|sorting nexin 10
mm10_v2_chr17_-_70998010_70998013	0.0583725	Hoxa9_Hoxb9	ENSMUST00000024846.6|Myl12a|ENSMUSG00000024048.8|myosin, light chain 12A, regulatory, non-sarcomeric
mm10_v2_chr18_-_15063560_15063617	0.0554191	Hoxa9_Hoxb9	ENSMUST00000168989.1|Kctd1|ENSMUSG00000036225.8|potassium channel tetramerisation domain containing 1
mm10_v2_chr1_+_107511489_107511502	0.0538109	Hoxa9_Hoxb9	ENSMUST00000064916.2|Serpinb2|ENSMUSG00000062345.4|serine (or cysteine) peptidase inhibitor, clade B, member 2
mm10_v2_chr5_+_145204523_145204668	0.0525974	Hoxa9_Hoxb9	ENSMUST00000085671.3|Zkscan5|ENSMUSG00000055991.9|zinc finger with KRAB and SCAN domains 5 	ENSMUST00000031601.7|Zkscan5|ENSMUSG00000055991.9|zinc finger with KRAB and SCAN domains 5
mm10_v2_chr17_-_34862473_34862535	0.0525033	Hoxa9_Hoxb9	ENSMUST00000025229.4|Cfb|ENSMUSG00000090231.4|complement factor B 	ENSMUST00000176203.2|Cfb|ENSMUSG00000090231.4|complement factor B 	ENSMUST00000128767.1|Cfb|ENSMUSG00000090231.4|complement factor B
mm10_v2_chr4_-_4793275_4793382	0.0464595	Hoxa9_Hoxb9	ENSMUST00000084949.2|Impad1|ENSMUSG00000066324.2|inositol monophosphatase domain containing 1
mm10_v2_chr18_+_12599894_12599926	0.0463623	Hoxa9_Hoxb9	ENSMUST00000169401.1|Ttc39c|ENSMUSG00000024424.8|tetratricopeptide repeat domain 39C
mm10_v2_chr8_+_27042555_27042589	0.0410996	Hoxa9_Hoxb9	ENSMUST00000033875.8|Prosc|ENSMUSG00000031485.8|proline synthetase co-transcribed 	ENSMUST00000098851.4|Prosc|ENSMUSG00000031485.8|proline synthetase co-transcribed
mm10_v2_chr1_-_105659008_105659008	0.0395538	Hoxa9_Hoxb9	ENSMUST00000070699.8|Pign|ENSMUSG00000056536.8|phosphatidylinositol glycan anchor biosynthesis, class N
mm10_v2_chr10_+_17796256_17796339	0.0394319	Hoxa9_Hoxb9	ENSMUST00000037964.6|Txlnb|ENSMUSG00000039891.6|taxilin beta
mm10_v2_chr3_-_95106907_95106930	0.0376265	Hoxa9_Hoxb9	ENSMUST00000107233.2|Pip5k1a|ENSMUSG00000028126.10|phosphatidylinositol-4-phosphate 5-kinase, type 1 alpha
mm10_v2_chr15_-_51991679_51991760	0.0346245	Hoxa9_Hoxb9	ENSMUST00000022927.9|Rad21|ENSMUSG00000022314.9|RAD21 homolog (S. pombe)
mm10_v2_chr1_+_89454769_89454885	0.0327762	Hoxa9_Hoxb9	ENSMUST00000027521.8|Agap1|ENSMUSG00000055013.8|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 	ENSMUST00000074945.5|Agap1|ENSMUSG00000055013.8|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1
mm10_v2_chr2_-_31845925_31846005	0.0323808	Hoxa9_Hoxb9	ENSMUST00000028188.7|Fibcd1|ENSMUSG00000026841.7|fibrinogen C domain containing 1
mm10_v2_chr2_-_58052832_58052870	0.0304209	Hoxa9_Hoxb9	ENSMUST00000090940.5|Ermn|ENSMUSG00000026830.9|ermin, ERM-like protein
mm10_v2_chr17_+_33638056_33638110	0.0291097	Hoxa9_Hoxb9	ENSMUST00000052079.7|Pram1|ENSMUSG00000032739.10|PML-RAR alpha-regulated adaptor molecule 1
mm10_v2_chr7_+_142533012_142533054	0.0283144	Hoxa9_Hoxb9	ENSMUST00000038675.6|Mrpl23|ENSMUSG00000037772.6|mitochondrial ribosomal protein L23
mm10_v2_chr17_-_6621267_6621267	0.0217374	Hoxa9_Hoxb9	ENSMUST00000115772.3|Tmem181c-ps|ENSMUSG00000093880.1|transmembrane protein 181C, pseudogene
mm10_v2_chr5_+_34999070_34999086	0.020883	Hoxa9_Hoxb9	ENSMUST00000114280.1|Rgs12|ENSMUSG00000029101.8|regulator of G-protein signaling 12
mm10_v2_chr12_-_113361232_113361232	0.0160138	Hoxa9_Hoxb9	ENSMUST00000103423.1|Ighg3|ENSMUSG00000076615.2|Immunoglobulin heavy constant gamma 3
mm10_v2_chr3_+_138374121_138374163	0.0134576	Hoxa9_Hoxb9	ENSMUST00000171054.1|Adh6-ps1|ENSMUSG00000090306.1|alcohol dehydrogenase 6 (class V), pseudogene 1
mm10_v2_chr2_+_80315461_80315511	0.011276	Hoxa9_Hoxb9	ENSMUST00000028392.7|Dnajc10|ENSMUSG00000027006.7|DnaJ (Hsp40) homolog, subfamily C, member 10
mm10_v2_chr5_+_34999111_34999184	0.010294	Hoxa9_Hoxb9	ENSMUST00000114283.1|Rgs12|ENSMUSG00000029101.8|regulator of G-protein signaling 12
mm10_v2_chr5_+_115235836_115235836	0.0084689	Hoxa9_Hoxb9	ENSMUST00000081497.6|Pop5|ENSMUSG00000060152.8|processing of precursor 5, ribonuclease P/MRP family (S. cerevisiae)
mm10_v2_chr1_-_65051119_65051150	0.00672205	Hoxa9_Hoxb9	ENSMUST00000161960.1|Cryge|ENSMUSG00000070870.6|crystallin, gamma E 	ENSMUST00000087359.5|Cryge|ENSMUSG00000070870.6|crystallin, gamma E
mm10_v2_chr1_+_109993982_109993982	0.00214803	Hoxa9_Hoxb9	ENSMUST00000027542.6|Cdh7|ENSMUSG00000026312.11|cadherin 7, type 2
mm10_v2_chr7_+_30231884_30231948	0.00197693	Hoxa9_Hoxb9	ENSMUST00000019882.9|Polr2i|ENSMUSG00000019738.9|polymerase (RNA) II (DNA directed) polypeptide I
mm10_v2_chr7_-_45870928_45870986	0.00187612	Hoxa9_Hoxb9	ENSMUST00000146672.1|Grin2d|ENSMUSG00000002771.10|glutamate receptor, ionotropic, NMDA2D (epsilon 4)
mm10_v2_chr2_-_165287755_165287845	5.27147e-05	Hoxa9_Hoxb9	ENSMUST00000109298.1|Slc35c2|ENSMUSG00000017664.10|solute carrier family 35, member C2 	ENSMUST00000109299.1|Slc35c2|ENSMUSG00000017664.10|solute carrier family 35, member C2 	ENSMUST00000130393.1|Slc35c2|ENSMUSG00000017664.10|solute carrier family 35, member C2 	ENSMUST00000017808.7|Slc35c2|ENSMUSG00000017664.10|solute carrier family 35, member C2 	ENSMUST00000131409.1|Slc35c2|ENSMUSG00000017664.10|solute carrier family 35, member C2 	ENSMUST00000156134.1|Slc35c2|ENSMUSG00000017664.10|solute carrier family 35, member C2 	ENSMUST00000133961.1|Slc35c2|ENSMUSG00000017664.10|solute carrier family 35, member C2
