mm10_v2_chr13_-_102906046_102906111	2.36292	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000171791.1|Mast4|ENSMUSG00000034751.9|microtubule associated serine/threonine kinase family member 4
mm10_v2_chr4_-_14621805_14621819	2.01088	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000042221.7|Slc26a7|ENSMUSG00000040569.7|solute carrier family 26, member 7
mm10_v2_chr13_-_102905740_102905814	1.53166	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000167462.1|Mast4|ENSMUSG00000034751.9|microtubule associated serine/threonine kinase family member 4
mm10_v2_chr4_-_14621669_14621786	1.37359	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000143105.1|Slc26a7|ENSMUSG00000040569.7|solute carrier family 26, member 7
mm10_v2_chr14_+_69347587_69347587	1.37331	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000064831.5|Entpd4|ENSMUSG00000095463.2|ectonucleoside triphosphate diphosphohydrolase 4
mm10_v2_chr8_-_21906412_21906437	1.26969	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000051965.4|Defb11|ENSMUSG00000045337.4|defensin beta 11
mm10_v2_chr6_+_34029421_34029456	1.19642	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000070189.3|Lrguk|ENSMUSG00000056215.6|leucine-rich repeats and guanylate kinase domain containing 	ENSMUST00000101564.2|Lrguk|ENSMUSG00000056215.6|leucine-rich repeats and guanylate kinase domain containing
mm10_v2_chr4_-_14621494_14621506	1.06204	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000149633.1|Slc26a7|ENSMUSG00000040569.7|solute carrier family 26, member 7
mm10_v2_chr16_+_11406618_11406675	1.0252	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000122168.1|Snx29|ENSMUSG00000071669.8|sorting nexin 29
mm10_v2_chr17_-_32822200_32822200	0.880628	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000179695.1|Zfp799|ENSMUSG00000095253.1|zinc finger protein 799
mm10_v2_chr14_-_88471396_88471396	0.824051	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000061628.5|Pcdh20|ENSMUSG00000050505.6|protocadherin 20
mm10_v2_chr10_+_37139558_37139558	0.817062	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000062667.3|5930403N24Rik|ENSMUSG00000046463.3|RIKEN cDNA 5930403N24 gene
mm10_v2_chr2_+_65620829_65620857	0.811277	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000028377.7|Scn2a1|ENSMUSG00000075318.6|sodium channel, voltage-gated, type II, alpha 1
mm10_v2_chr7_+_39588931_39588931	0.676748	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000178791.1|Gm2058|ENSMUSG00000074903.4|predicted gene 2058 	ENSMUST00000098511.3|Gm2058|ENSMUSG00000074903.4|predicted gene 2058
mm10_v2_chr4_+_103143052_103143071	0.626112	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000106855.1|Mier1|ENSMUSG00000028522.10|mesoderm induction early response 1 homolog (Xenopus laevis
mm10_v2_chr5_-_62765618_62765656	0.596242	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000159470.1|Arap2|ENSMUSG00000037999.9|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2
mm10_v2_chr7_-_45103747_45103822	0.593426	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000003512.7|Fcgrt|ENSMUSG00000003420.7|Fc receptor, IgG, alpha chain transporter
mm10_v2_chr2_-_150255591_150255591	0.579053	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000063463.5|Gm21994|ENSMUSG00000074735.2|predicted gene 21994
mm10_v2_chr6_+_124304646_124304671	0.556844	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000112541.2|Cd163|ENSMUSG00000008845.3|CD163 antigen 	ENSMUST00000032234.2|Cd163|ENSMUSG00000008845.3|CD163 antigen
mm10_v2_chr17_-_78684262_78684352	0.538671	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000145480.1|Strn|ENSMUSG00000024077.9|striatin, calmodulin binding protein
mm10_v2_chr5_+_37185897_37185897	0.484305	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000094840.3|Gm1043|ENSMUSG00000070823.3|predicted gene 1043
mm10_v2_chr5_-_63968867_63968905	0.450188	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000154169.1|Rell1|ENSMUSG00000047881.8|RELT-like 1
mm10_v2_chr4_+_102589687_102589843	0.428185	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000097949.4|Pde4b|ENSMUSG00000028525.10|phosphodiesterase 4B, cAMP specific 	ENSMUST00000106901.1|Pde4b|ENSMUSG00000028525.10|phosphodiesterase 4B, cAMP specific
mm10_v2_chr4_+_108719649_108719649	0.427778	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000178992.1|3110021N24Rik|ENSMUSG00000094958.1|RIKEN cDNA 3110021N24 gene
mm10_v2_chr3_+_55461758_55461961	0.41185	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000070418.4|Dclk1|ENSMUSG00000027797.9|doublecortin-like kinase 1
mm10_v2_chr9_+_32224457_32224592	0.409086	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000183121.1|Arhgap32|ENSMUSG00000041444.8|Rho GTPase activating protein 32
mm10_v2_chr9_+_53771499_53771535	0.402198	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000048670.8|Slc35f2|ENSMUSG00000042195.8|solute carrier family 35, member F2
mm10_v2_chr12_-_79190955_79190976	0.397662	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000085254.6|Rdh11|ENSMUSG00000066441.8|retinol dehydrogenase 11
mm10_v2_chr5_+_31526989_31527034	0.393212	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000114533.2|Slc4a1ap|ENSMUSG00000029141.10|solute carrier family 4 (anion exchanger), member 1, adaptor protein 	ENSMUST00000117262.1|Slc4a1ap|ENSMUSG00000029141.10|solute carrier family 4 (anion exchanger), member 1, adaptor protein 	ENSMUST00000117319.1|Slc4a1ap|ENSMUSG00000029141.10|solute carrier family 4 (anion exchanger), member 1, adaptor protein
mm10_v2_chr10_+_116143881_116143903	0.344176	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000105271.2|Ptprr|ENSMUSG00000020151.10|protein tyrosine phosphatase, receptor type, R
mm10_v2_chr5_-_62766153_62766246	0.332545	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000076623.4|Arap2|ENSMUSG00000037999.9|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2
mm10_v2_chr19_-_29334646_29334670	0.316599	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000044143.5|Rln1|ENSMUSG00000039097.5|relaxin 1
mm10_v2_chr7_+_38183217_38183278	0.310368	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000165308.1|1600014C10Rik|ENSMUSG00000054676.9|RIKEN cDNA 1600014C10 gene
mm10_v2_chr2_+_144270900_144271055	0.309303	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000028910.2|Mgme1|ENSMUSG00000027424.5|mitochondrial genome maintainance exonuclease 1 	ENSMUST00000110027.1|Mgme1|ENSMUSG00000027424.5|mitochondrial genome maintainance exonuclease 1
mm10_v2_chr2_-_125782834_125782870	0.307694	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000053699.6|Secisbp2l|ENSMUSG00000035093.10|SECIS binding protein 2-like
mm10_v2_chr14_+_4198185_4198185	0.29877	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000180184.1|Gm2974|ENSMUSG00000079391.4|predicted gene 2974
mm10_v2_chr14_+_4514758_4514758	0.289366	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000112776.2|Gm3173|ENSMUSG00000079386.2|predicted gene 3173
mm10_v2_chr7_+_38183787_38183869	0.288406	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000067854.8|1600014C10Rik|ENSMUSG00000054676.9|RIKEN cDNA 1600014C10 gene 	ENSMUST00000177983.1|1600014C10Rik|ENSMUSG00000054676.9|RIKEN cDNA 1600014C10 gene
mm10_v2_chr14_-_64455903_64455903	0.278893	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000067927.7|Msra|ENSMUSG00000054733.8|methionine sulfoxide reductase A
mm10_v2_chrX_-_160138375_160138435	0.276874	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000033662.8|Pdha1|ENSMUSG00000031299.10|pyruvate dehydrogenase E1 alpha 1
mm10_v2_chr13_-_58354862_58354862	0.276252	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000043605.5|Kif27|ENSMUSG00000060176.3|kinesin family member 27
mm10_v2_chr14_+_4430992_4430992	0.264951	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000164603.1|Gm3173|ENSMUSG00000079386.2|predicted gene 3173 	ENSMUST00000166848.1|Gm3173|ENSMUSG00000079386.2|predicted gene 3173
mm10_v2_chr2_-_73580288_73580353	0.264436	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000028515.3|Chrna1|ENSMUSG00000027107.3|cholinergic receptor, nicotinic, alpha polypeptide 1 (muscle)
mm10_v2_chr12_+_24974914_24974948	0.261153	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000066652.5|Kidins220|ENSMUSG00000036333.10|kinase D-interacting substrate 220
mm10_v2_chr5_-_43981757_43981773	0.257392	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000061299.7|Fgfbp1|ENSMUSG00000048373.7|fibroblast growth factor binding protein 1
mm10_v2_chr12_+_112760652_112760659	0.25548	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000063888.3|Pld4|ENSMUSG00000052160.6|phospholipase D family, member 4
mm10_v2_chr10_+_90071095_90071117	0.255046	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000183109.1|Anks1b|ENSMUSG00000058589.8|ankyrin repeat and sterile alpha motif domain containing 1B
mm10_v2_chr14_-_19569553_19569553	0.250196	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000112595.2|Gm2237|ENSMUSG00000093979.1|predicted gene 2237
mm10_v2_chr14_+_5517172_5517172	0.246586	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000178220.1|Gm3488|ENSMUSG00000095295.2|predicted gene, 3488
mm10_v2_chr14_+_5164535_5164535	0.246586	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000179659.1|Gm3317|ENSMUSG00000095912.1|predicted gene 3317
mm10_v2_chr18_+_86711520_86711650	0.243539	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000122464.1|Cbln2|ENSMUSG00000024647.8|cerebellin 2 precursor protein
mm10_v2_chr9_-_75597643_75597656	0.240076	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000164100.1|Tmod2|ENSMUSG00000032186.8|tropomodulin 2
mm10_v2_chr14_+_3348089_3348089	0.23713	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000178722.1|Gm2956|ENSMUSG00000096574.1|predicted gene 2956
mm10_v2_chr13_+_77135513_77135583	0.236991	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000168779.1|2210408I21Rik|ENSMUSG00000071252.5|RIKEN cDNA 2210408I21 gene
mm10_v2_chr14_+_3428103_3428103	0.236093	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000178060.1|Gm3005|ENSMUSG00000095195.1|predicted gene 3005
mm10_v2_chr14_-_104522615_104522707	0.234894	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000022716.2|Rnf219|ENSMUSG00000022120.3|ring finger protein 219
mm10_v2_chr2_+_125136692_125136769	0.226705	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000099452.2|Ctxn2|ENSMUSG00000074872.2|cortexin 2
mm10_v2_chrX_+_107255878_107256064	0.226269	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000101294.2|Gpr174|ENSMUSG00000073008.5|G protein-coupled receptor 174 	ENSMUST00000118820.1|Gpr174|ENSMUSG00000073008.5|G protein-coupled receptor 174 	ENSMUST00000120971.1|Gpr174|ENSMUSG00000073008.5|G protein-coupled receptor 174
mm10_v2_chr15_+_16778101_16778101	0.225253	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000026432.6|Cdh9|ENSMUSG00000025370.6|cadherin 9
mm10_v2_chr14_-_7473073_7473073	0.223804	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000167833.2|Gm3752|ENSMUSG00000091617.2|predicted gene 3752
mm10_v2_chr11_+_60537978_60538074	0.21888	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000044250.3|Alkbh5|ENSMUSG00000042650.3|alkB, alkylation repair homolog 5 (E. coli)
mm10_v2_chr14_+_26259109_26259109	0.217446	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000174494.1|Duxbl3|ENSMUSG00000072672.4|double homeobox B-like 3
mm10_v2_chr15_-_103215285_103215366	0.216885	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000122182.1|Cbx5|ENSMUSG00000009575.8|chromobox 5 	ENSMUST00000108813.3|Cbx5|ENSMUSG00000009575.8|chromobox 5 	ENSMUST00000127191.1|Cbx5|ENSMUSG00000009575.8|chromobox 5
mm10_v2_chr6_+_145934113_145934136	0.214485	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000032383.7|Sspn|ENSMUSG00000030255.7|sarcospan
mm10_v2_chr14_-_6411578_6411578	0.212965	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000179312.1|Gm3591|ENSMUSG00000096904.1|predicted gene 3591
mm10_v2_chr7_-_126676357_126676383	0.20965	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000106371.1|Sult1a1|ENSMUSG00000030711.9|sulfotransferase family 1A, phenol-preferring, member 1 	ENSMUST00000106372.3|Sult1a1|ENSMUSG00000030711.9|sulfotransferase family 1A, phenol-preferring, member 1 	ENSMUST00000155419.1|Sult1a1|ENSMUSG00000030711.9|sulfotransferase family 1A, phenol-preferring, member 1
mm10_v2_chr8_-_122915987_122915987	0.208392	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000098333.4|Ankrd11|ENSMUSG00000035569.10|ankyrin repeat domain 11
mm10_v2_chrX_-_143933089_143933142	0.203258	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000087313.3|Dcx|ENSMUSG00000031285.8|doublecortin
mm10_v2_chr14_+_4871156_4871156	0.188821	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000166410.2|Gm3264|ENSMUSG00000094132.1|predicted gene 3264
mm10_v2_chr3_+_121953213_121953295	0.188203	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000037958.7|Arhgap29|ENSMUSG00000039831.10|Rho GTPase activating protein 29 	ENSMUST00000128366.1|Arhgap29|ENSMUSG00000039831.10|Rho GTPase activating protein 29
mm10_v2_chr2_-_144270852_144270906	0.178661	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000110030.3|Snx5|ENSMUSG00000027423.9|sorting nexin 5
mm10_v2_chr2_-_5063996_5064048	0.176065	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000114996.1|Optn|ENSMUSG00000026672.5|optineurin
mm10_v2_chr5_+_26817357_26817428	0.17573	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000071500.6|Dpp6|ENSMUSG00000061576.9|dipeptidylpeptidase 6
mm10_v2_chr18_+_12741324_12741355	0.174772	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000115857.2|Cabyr|ENSMUSG00000024430.7|calcium-binding tyrosine-(Y)-phosphorylation regulated (fibrousheathin 2) 	ENSMUST00000121018.1|Cabyr|ENSMUSG00000024430.7|calcium-binding tyrosine-(Y)-phosphorylation regulated (fibrousheathin 2) 	ENSMUST00000119108.1|Cabyr|ENSMUSG00000024430.7|calcium-binding tyrosine-(Y)-phosphorylation regulated (fibrousheathin 2)
mm10_v2_chr7_+_128744870_128745020	0.174249	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000042942.8|Sec23ip|ENSMUSG00000055319.7|Sec23 interacting protein
mm10_v2_chr3_-_67515487_67515523	0.171998	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000178314.1|Rarres1|ENSMUSG00000049404.5|retinoic acid receptor responder (tazarotene induced) 1 	ENSMUST00000054825.4|Rarres1|ENSMUSG00000049404.5|retinoic acid receptor responder (tazarotene induced) 1
mm10_v2_chr2_-_33718789_33718899	0.171637	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000130532.1|9430024E24Rik|ENSMUSG00000085463.1|RIKEN cDNA 9430024E24 gene
mm10_v2_chr15_-_8710409_8710498	0.171455	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000157065.1|Slc1a3|ENSMUSG00000005360.8|solute carrier family 1 (glial high affinity glutamate transporter), member 3
mm10_v2_chr2_+_121956651_121956664	0.169291	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000110574.1|Ctdspl2|ENSMUSG00000033411.10|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2
mm10_v2_chr19_-_32196393_32196428	0.168709	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000151822.1|Sgms1|ENSMUSG00000040451.11|sphingomyelin synthase 1
mm10_v2_chr12_+_80644212_80644265	0.168218	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000085245.5|Slc39a9|ENSMUSG00000048833.8|solute carrier family 39 (zinc transporter), member 9
mm10_v2_chr14_-_6741430_6741430	0.167717	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000100904.4|Gm3636|ENSMUSG00000091754.2|predicted gene 3636
mm10_v2_chr3_-_116712644_116712655	0.167387	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000029569.2|Slc35a3|ENSMUSG00000027957.7|solute carrier family 35 (UDP-N-acetylglucosamine (UDP-GlcNAc) transporter), member 3
mm10_v2_chr18_+_86711059_86711110	0.166965	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000068423.3|Cbln2|ENSMUSG00000024647.8|cerebellin 2 precursor protein
mm10_v2_chr11_+_5520652_5520659	0.165576	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000063084.9|Xbp1|ENSMUSG00000020484.12|X-box binding protein 1
mm10_v2_chr7_-_126676428_126676439	0.161372	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000106373.1|Sult1a1|ENSMUSG00000030711.9|sulfotransferase family 1A, phenol-preferring, member 1
mm10_v2_chr14_+_3667518_3667518	0.160107	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000112801.3|Gm3020|ENSMUSG00000079402.3|predicted gene 3020
mm10_v2_chr6_-_136941887_136941911	0.158089	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000111891.1|Arhgdib|ENSMUSG00000030220.7|Rho, GDP dissociation inhibitor (GDI) beta
mm10_v2_chr7_+_39449479_39449523	0.155924	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000061201.8|Zfp939|ENSMUSG00000030424.9|zinc finger protein 939
mm10_v2_chr14_-_6874257_6874257	0.153569	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000179374.1|Gm3629|ENSMUSG00000093898.1|predicted gene 3629 	ENSMUST00000178298.1|Gm3667|ENSMUSG00000090691.2|predicted gene 3667
mm10_v2_chr9_-_20959785_20959888	0.150004	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000177754.1|Dnmt1|ENSMUSG00000004099.9|DNA methyltransferase (cytosine-5) 1
mm10_v2_chr5_-_92348871_92348889	0.149683	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000038816.6|Cxcl10|ENSMUSG00000034855.7|chemokine (C-X-C motif) ligand 10 	ENSMUST00000118006.1|Cxcl10|ENSMUSG00000034855.7|chemokine (C-X-C motif) ligand 10
mm10_v2_chr8_+_113635550_113635597	0.148972	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000179926.1|Mon1b|ENSMUSG00000078908.3|MON1 homolog b (yeast)
mm10_v2_chr8_+_34054622_34054647	0.148885	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000149618.1|Gm9951|ENSMUSG00000054618.8|predicted gene 9951
mm10_v2_chr15_-_67113909_67113992	0.147642	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000092640.5|St3gal1|ENSMUSG00000013846.9|ST3 beta-galactoside alpha-2,3-sialyltransferase 1
mm10_v2_chr8_+_82863351_82863397	0.145663	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000078525.5|Rnf150|ENSMUSG00000047747.9|ring finger protein 150
mm10_v2_chr8_+_113635787_113635842	0.143771	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000035777.8|Mon1b|ENSMUSG00000078908.3|MON1 homolog b (yeast)
mm10_v2_chr11_+_121237216_121237289	0.139743	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000103015.3|Narf|ENSMUSG00000000056.7|nuclear prelamin A recognition factor
mm10_v2_chr9_+_76014855_76015055	0.138799	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000008052.6|Hmgcll1|ENSMUSG00000007908.8|3-hydroxymethyl-3-methylglutaryl-Coenzyme A lyase-like 1 	ENSMUST00000183425.1|Hmgcll1|ENSMUSG00000007908.8|3-hydroxymethyl-3-methylglutaryl-Coenzyme A lyase-like 1 	ENSMUST00000183979.1|Hmgcll1|ENSMUSG00000007908.8|3-hydroxymethyl-3-methylglutaryl-Coenzyme A lyase-like 1 	ENSMUST00000117981.2|Hmgcll1|ENSMUSG00000007908.8|3-hydroxymethyl-3-methylglutaryl-Coenzyme A lyase-like 1
mm10_v2_chr1_+_85575676_85575676	0.138276	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000178024.1|G530012D18Rik|ENSMUSG00000094127.1|RIKEN cDNA G530012D1 gene
mm10_v2_chr2_+_109917639_109917656	0.133753	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000046548.7|Lgr4|ENSMUSG00000050199.7|leucine-rich repeat-containing G protein-coupled receptor 4 	ENSMUST00000111037.2|Lgr4|ENSMUSG00000050199.7|leucine-rich repeat-containing G protein-coupled receptor 4
mm10_v2_chr1_-_185329331_185329401	0.133374	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000027921.4|Iars2|ENSMUSG00000026618.5|isoleucine-tRNA synthetase 2, mitochondrial 	ENSMUST00000110975.1|Iars2|ENSMUSG00000026618.5|isoleucine-tRNA synthetase 2, mitochondrial 	ENSMUST00000110974.3|Iars2|ENSMUSG00000026618.5|isoleucine-tRNA synthetase 2, mitochondrial
mm10_v2_chr17_-_33033367_33033411	0.132684	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000087654.4|Zfp763|ENSMUSG00000067430.7|zinc finger protein 763
mm10_v2_chr16_-_42340595_42340651	0.131777	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000102817.4|Gap43|ENSMUSG00000047261.9|growth associated protein 43
mm10_v2_chr19_-_41933276_41933319	0.128915	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000075280.4|Exosc1|ENSMUSG00000034321.7|exosome component 1 	ENSMUST00000112123.2|Exosc1|ENSMUSG00000034321.7|exosome component 1
mm10_v2_chr15_-_8710734_8710764	0.128422	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000005493.7|Slc1a3|ENSMUSG00000005360.8|solute carrier family 1 (glial high affinity glutamate transporter), member 3
mm10_v2_chr9_-_107872403_107872422	0.125836	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000183035.1|Rbm6|ENSMUSG00000032582.8|RNA binding motif protein 6
mm10_v2_chr2_-_20943413_20943424	0.124563	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000140230.1|Arhgap21|ENSMUSG00000036591.9|Rho GTPase activating protein 21
mm10_v2_chr15_-_37459327_37459380	0.124097	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000119730.1|Ncald|ENSMUSG00000051359.8|neurocalcin delta 	ENSMUST00000120746.1|Ncald|ENSMUSG00000051359.8|neurocalcin delta
mm10_v2_chr9_-_85749308_85749356	0.122325	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000039213.8|Ibtk|ENSMUSG00000035941.9|inhibitor of Bruton agammaglobulinemia tyrosine kinase
mm10_v2_chr1_-_174921813_174921827	0.121837	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000055294.3|Grem2|ENSMUSG00000050069.3|gremlin 2 homolog, cysteine knot superfamily (Xenopus laevis)
mm10_v2_chr11_-_107337556_107337637	0.121508	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000040380.6|Pitpnc1|ENSMUSG00000040430.12|phosphatidylinositol transfer protein, cytoplasmic 1
mm10_v2_chr12_-_85824506_85824555	0.121366	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000021676.5|0610007P14Rik|ENSMUSG00000021252.5|RIKEN cDNA 0610007P14 gene 	ENSMUST00000142331.1|0610007P14Rik|ENSMUSG00000021252.5|RIKEN cDNA 0610007P14 gene
mm10_v2_chr12_+_71831064_71831178	0.116278	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000085299.2|Daam1|ENSMUSG00000034574.9|dishevelled associated activator of morphogenesis 1
mm10_v2_chr14_+_4741737_4741737	0.115811	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000178748.1|Gm3252|ENSMUSG00000094628.1|predicted gene 3252
mm10_v2_chr6_-_136941694_136941756	0.114668	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000032344.5|Arhgdib|ENSMUSG00000030220.7|Rho, GDP dissociation inhibitor (GDI) beta
mm10_v2_chr5_+_121397936_121398004	0.114133	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000042163.8|Naa25|ENSMUSG00000042719.11|N(alpha)-acetyltransferase 25, NatB auxiliary subunit
mm10_v2_chr2_-_104493690_104493753	0.113382	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000111124.1|Hipk3|ENSMUSG00000027177.8|homeodomain interacting protein kinase 3
mm10_v2_chr3_+_66219909_66219927	0.113302	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000029421.5|Ptx3|ENSMUSG00000027832.5|pentraxin related gene
mm10_v2_chr14_+_4126066_4126066	0.112366	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000167397.2|Gm8108|ENSMUSG00000091563.2|predicted gene 8108
mm10_v2_chr4_-_149126688_149126763	0.110411	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000030815.2|Cort|ENSMUSG00000028971.4|cortistatin
mm10_v2_chr13_-_81710937_81711013	0.109422	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000161920.1|Polr3g|ENSMUSG00000035834.5|polymerase (RNA) III (DNA directed) polypeptide G 	ENSMUST00000048993.5|Polr3g|ENSMUSG00000035834.5|polymerase (RNA) III (DNA directed) polypeptide G
mm10_v2_chrX_+_56346390_56346415	0.109171	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000101560.3|Zfp449|ENSMUSG00000073176.4|zinc finger protein 449
mm10_v2_chr14_+_3825596_3825596	0.10761	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000178256.1|Gm3002|ENSMUSG00000096793.1|predicted gene 3002
mm10_v2_chr7_-_25005895_25005937	0.104105	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000102858.3|Atp1a3|ENSMUSG00000040907.9|ATPase, Na+/K+ transporting, alpha 3 polypeptide 	ENSMUST00000080882.6|Atp1a3|ENSMUSG00000040907.9|ATPase, Na+/K+ transporting, alpha 3 polypeptide
mm10_v2_chr14_-_6266620_6266620	0.102014	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000096172.5|Gm3411|ENSMUSG00000079396.3|predicted gene 3411
mm10_v2_chr14_+_4665094_4665094	0.101474	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000169675.2|Gm3239|ENSMUSG00000090872.2|predicted gene 3239
mm10_v2_chr9_-_22259887_22259949	0.100837	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000086281.4|Zfp599|ENSMUSG00000062794.8|zinc finger protein 599
mm10_v2_chr8_-_35495487_35495545	0.0992111	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000033927.6|Eri1|ENSMUSG00000031527.6|exoribonuclease 1
mm10_v2_chr18_-_56975333_56975376	0.099081	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000139243.2|C330018D20Rik|ENSMUSG00000024592.9|RIKEN cDNA C330018D20 gene 	ENSMUST00000025488.8|C330018D20Rik|ENSMUSG00000024592.9|RIKEN cDNA C330018D20 gene
mm10_v2_chr14_-_5863663_5863663	0.0980353	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000178594.1|Gm8237|ENSMUSG00000090707.2|predicted gene 8237
mm10_v2_chr10_-_9901079_9901250	0.0958991	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000141722.1|Stxbp5|ENSMUSG00000019790.10|syntaxin binding protein 5 (tomosyn)
mm10_v2_chr2_+_121956411_121956480	0.0955449	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000110578.1|Ctdspl2|ENSMUSG00000033411.10|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2
mm10_v2_chrX_-_139871637_139871677	0.0942049	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000033811.7|Morc4|ENSMUSG00000031434.9|microrchidia 4 	ENSMUST00000087401.5|Morc4|ENSMUSG00000031434.9|microrchidia 4
mm10_v2_chr12_-_91849081_91849157	0.0936167	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000167466.1|Sel1l|ENSMUSG00000020964.8|sel-1 suppressor of lin-12-like (C. elegans) 	ENSMUST00000021347.5|Sel1l|ENSMUSG00000020964.8|sel-1 suppressor of lin-12-like (C. elegans) 	ENSMUST00000178462.1|Sel1l|ENSMUSG00000020964.8|sel-1 suppressor of lin-12-like (C. elegans)
mm10_v2_chr4_+_15881255_15881272	0.0932683	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000029876.1|Calb1|ENSMUSG00000028222.2|calbindin 1
mm10_v2_chr2_+_3770673_3770708	0.0929167	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000177037.1|Fam107b|ENSMUSG00000026655.8|family with sequence similarity 107, member B
mm10_v2_chr6_-_136941494_136941505	0.0925985	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000111892.1|Arhgdib|ENSMUSG00000030220.7|Rho, GDP dissociation inhibitor (GDI) beta
mm10_v2_chr19_-_9559204_9559248	0.0887965	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000090527.3|Stxbp3b|ENSMUSG00000071640.2|syntaxin-binding protein 3B
mm10_v2_chr14_-_100149764_100149764	0.086827	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000097079.4|Klf12|ENSMUSG00000072294.4|Kruppel-like factor 12
mm10_v2_chr10_-_62379852_62379917	0.0857026	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000143236.1|Hk1|ENSMUSG00000037012.12|hexokinase 1 	ENSMUST00000133429.1|Hk1|ENSMUSG00000037012.12|hexokinase 1 	ENSMUST00000132926.1|Hk1|ENSMUSG00000037012.12|hexokinase 1 	ENSMUST00000116238.2|Hk1|ENSMUSG00000037012.12|hexokinase 1
mm10_v2_chr17_+_36958571_36958611	0.0853199	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000040177.6|Znrd1as|ENSMUSG00000036214.7|Znrd1 antisense
mm10_v2_chr9_+_40269273_40269303	0.0843891	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000176185.1|Scn3b|ENSMUSG00000049281.9|sodium channel, voltage-gated, type III, beta
mm10_v2_chr4_-_132075250_132075292	0.0841784	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000105970.1|Epb4.1|ENSMUSG00000028906.9|erythrocyte protein band 4.1 	ENSMUST00000105975.1|Epb4.1|ENSMUSG00000028906.9|erythrocyte protein band 4.1
mm10_v2_chr11_+_35121126_35121224	0.0821251	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000069837.3|Slit3|ENSMUSG00000056427.4|slit homolog 3 (Drosophila)
mm10_v2_chr5_+_3543812_3543853	0.0819509	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000115527.3|Fam133b|ENSMUSG00000058503.7|family with sequence similarity 133, member B
mm10_v2_chr17_+_34969912_34969912	0.0816846	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000173680.1|Gm20481|ENSMUSG00000092609.1|predicted gene 20481
mm10_v2_chr13_+_67863324_67863328	0.0814222	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000078471.5|BC048507|ENSMUSG00000064063.5|cDNA sequence BC048507
mm10_v2_chr9_-_14381242_14381242	0.0790532	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000167549.1|Endod1|ENSMUSG00000037419.8|endonuclease domain containing 1
mm10_v2_chr3_+_138374121_138374163	0.0776919	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000171054.1|Adh6-ps1|ENSMUSG00000090306.1|alcohol dehydrogenase 6 (class V), pseudogene 1
mm10_v2_chr9_+_40269202_40269265	0.0764745	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000114956.3|Scn3b|ENSMUSG00000049281.9|sodium channel, voltage-gated, type III, beta 	ENSMUST00000049941.5|Scn3b|ENSMUSG00000049281.9|sodium channel, voltage-gated, type III, beta
mm10_v2_chr15_+_9436028_9436083	0.0745976	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000042360.3|Capsl|ENSMUSG00000039676.3|calcyphosine-like
mm10_v2_chr2_+_126556128_126556128	0.0736705	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000141482.2|Slc27a2|ENSMUSG00000027359.10|solute carrier family 27 (fatty acid transporter), member 2
mm10_v2_chr14_-_15438974_15439002	0.0716301	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000055211.4|Lrrc3b|ENSMUSG00000045201.5|leucine rich repeat containing 3B
mm10_v2_chr6_+_38381469_38381528	0.0715596	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000162554.1|Ttc26|ENSMUSG00000056832.8|tetratricopeptide repeat domain 26 	ENSMUST00000161751.1|Ttc26|ENSMUSG00000056832.8|tetratricopeptide repeat domain 26
mm10_v2_chr13_-_41847626_41847684	0.0710073	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000121404.1|Adtrp|ENSMUSG00000058022.7|androgen dependent TFPI regulating protein
mm10_v2_chr1_+_72284367_72284419	0.0706088	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000027380.5|Tmem169|ENSMUSG00000026188.5|transmembrane protein 169 	ENSMUST00000141783.1|Tmem169|ENSMUSG00000026188.5|transmembrane protein 169
mm10_v2_chr5_+_121749196_121749196	0.070438	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000161064.1|Atxn2|ENSMUSG00000042605.9|ataxin 2
mm10_v2_chr13_-_95250166_95250336	0.07024	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000162153.1|Pde8b|ENSMUSG00000021684.10|phosphodiesterase 8B 	ENSMUST00000160957.2|Pde8b|ENSMUSG00000021684.10|phosphodiesterase 8B 	ENSMUST00000159598.1|Pde8b|ENSMUSG00000021684.10|phosphodiesterase 8B 	ENSMUST00000162412.1|Pde8b|ENSMUSG00000021684.10|phosphodiesterase 8B
mm10_v2_chr7_+_100159241_100159315	0.0702224	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000032967.3|Lipt2|ENSMUSG00000030725.3|lipoyl(octanoyl) transferase 2 (putative)
mm10_v2_chr16_+_96145391_96145448	0.068826	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000023913.8|Wrb|ENSMUSG00000023147.9|tryptophan rich basic protein 	ENSMUST00000135448.1|Wrb|ENSMUSG00000023147.9|tryptophan rich basic protein
mm10_v2_chr13_-_105271039_105271039	0.0676351	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000069686.6|Rnf180|ENSMUSG00000021720.10|ring finger protein 180
mm10_v2_chr11_-_4095344_4095445	0.0670974	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000004868.5|Mtfp1|ENSMUSG00000004748.5|mitochondrial fission process 1
mm10_v2_chr5_-_138170992_138171033	0.0649014	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000139983.1|Mcm7|ENSMUSG00000029730.10|minichromosome maintenance deficient 7 (S. cerevisiae)
mm10_v2_chr5_-_31526693_31526773	0.0641674	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000118874.1|Supt7l|ENSMUSG00000053134.7|suppressor of Ty 7-like 	ENSMUST00000117642.1|Supt7l|ENSMUSG00000053134.7|suppressor of Ty 7-like 	ENSMUST00000065388.4|Supt7l|ENSMUSG00000053134.7|suppressor of Ty 7-like
mm10_v2_chr2_-_34826071_34826087	0.0626894	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000113077.1|Fbxw2|ENSMUSG00000035949.9|F-box and WD-40 domain protein 2 	ENSMUST00000028220.3|Fbxw2|ENSMUSG00000035949.9|F-box and WD-40 domain protein 2
mm10_v2_chr2_-_34826187_34826240	0.0626306	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000113075.1|Fbxw2|ENSMUSG00000035949.9|F-box and WD-40 domain protein 2 	ENSMUST00000113080.2|Fbxw2|ENSMUSG00000035949.9|F-box and WD-40 domain protein 2 	ENSMUST00000091020.3|Fbxw2|ENSMUSG00000035949.9|F-box and WD-40 domain protein 2
mm10_v2_chr9_-_113708209_113708259	0.0615996	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000111861.3|Pdcd6ip|ENSMUSG00000032504.9|programmed cell death 6 interacting protein 	ENSMUST00000035086.6|Pdcd6ip|ENSMUSG00000032504.9|programmed cell death 6 interacting protein
mm10_v2_chr8_+_13869641_13869740	0.0606633	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000051870.7|Champ1|ENSMUSG00000047710.7|chromosome alignment maintaining phosphoprotein 1 	ENSMUST00000128557.1|Champ1|ENSMUSG00000047710.7|chromosome alignment maintaining phosphoprotein 1
mm10_v2_chr18_-_46311891_46311928	0.0584771	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000072835.6|Ccdc112|ENSMUSG00000071855.4|coiled-coil domain containing 112
mm10_v2_chr12_+_116275386_116275386	0.0583634	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000090195.4|Gm11027|ENSMUSG00000078984.1|predicted gene 11027
mm10_v2_chr9_-_123678782_123678850	0.0572398	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000170591.1|Slc6a20a|ENSMUSG00000036814.6|solute carrier family 6 (neurotransmitter transporter), member 20A 	ENSMUST00000171647.1|Slc6a20a|ENSMUSG00000036814.6|solute carrier family 6 (neurotransmitter transporter), member 20A
mm10_v2_chr3_+_121291725_121291817	0.0560005	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000039442.7|Alg14|ENSMUSG00000039887.7|asparagine-linked glycosylation 14
mm10_v2_chr12_-_80643799_80643857	0.0548519	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000166931.1|Erh|ENSMUSG00000021131.7|enhancer of rudimentary homolog (Drosophila)
mm10_v2_chr6_-_118479237_118479320	0.0547127	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000161170.1|Zfp9|ENSMUSG00000072623.5|zinc finger protein 9
mm10_v2_chr5_+_118169712_118169748	0.0533802	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000054836.6|Hrk|ENSMUSG00000046607.6|harakiri, BCL2 interacting protein (contains only BH3 domain)
mm10_v2_chr19_+_8802486_8802530	0.0526032	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000172175.1|Zbtb3|ENSMUSG00000071661.6|zinc finger and BTB domain containing 3
mm10_v2_chr9_+_113812547_113812621	0.0506637	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000166734.2|Clasp2|ENSMUSG00000033392.9|CLIP associating protein 2 	ENSMUST00000111838.2|Clasp2|ENSMUSG00000033392.9|CLIP associating protein 2 	ENSMUST00000163895.2|Clasp2|ENSMUSG00000033392.9|CLIP associating protein 2
mm10_v2_chr15_+_38661904_38661981	0.0502682	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000022904.6|Atp6v1c1|ENSMUSG00000022295.7|ATPase, H+ transporting, lysosomal V1 subunit C1
mm10_v2_chr10_-_117148474_117148510	0.0502096	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000020381.3|Frs2|ENSMUSG00000020170.3|fibroblast growth factor receptor substrate 2
mm10_v2_chr2_-_121235689_121235846	0.0484953	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000142400.1|Trp53bp1|ENSMUSG00000043909.10|transformation related protein 53 binding protein 1
mm10_v2_chr4_-_129227883_129227923	0.0482435	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000106051.1|C77080|ENSMUSG00000050390.6|expressed sequence C77080
mm10_v2_chr1_+_63176818_63176919	0.0465	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000129339.1|Eef1b2|ENSMUSG00000025967.10|eukaryotic translation elongation factor 1 beta 2
mm10_v2_chr10_+_23797052_23797200	0.0449117	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000133289.1|Slc18b1|ENSMUSG00000037455.10|solute carrier family 18, subfamily B, member 1
mm10_v2_chr2_+_32606946_32606973	0.0441328	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000113290.1|St6galnac6|ENSMUSG00000026811.12|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6
mm10_v2_chr2_-_29787622_29787680	0.0423395	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000177467.1|Trub2|ENSMUSG00000039826.7|TruB pseudouridine (psi) synthase homolog 2 (E. coli) 	ENSMUST00000113807.3|Trub2|ENSMUSG00000039826.7|TruB pseudouridine (psi) synthase homolog 2 (E. coli)
mm10_v2_chr7_-_100583072_100583124	0.041874	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000152876.1|Mrpl48|ENSMUSG00000030706.10|mitochondrial ribosomal protein L48 	ENSMUST00000150042.1|Mrpl48|ENSMUSG00000030706.10|mitochondrial ribosomal protein L48
mm10_v2_chr16_-_64771146_64771184	0.0406094	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000076991.6|4930453N24Rik|ENSMUSG00000059920.9|RIKEN cDNA 4930453N24 gene
mm10_v2_chr10_+_75037066_75037100	0.0400576	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000147802.1|Rab36|ENSMUSG00000020175.7|RAB36, member RAS oncogene family 	ENSMUST00000020391.5|Rab36|ENSMUSG00000020175.7|RAB36, member RAS oncogene family
mm10_v2_chr5_-_34660068_34660148	0.0400345	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000041364.9|Nop14|ENSMUSG00000036693.9|NOP14 nucleolar protein
mm10_v2_chr3_-_39359128_39359160	0.0384729	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000056409.2|Gm9845|ENSMUSG00000050533.2|predicted pseudogene 9845
mm10_v2_chr2_+_152669461_152669539	0.0367827	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000125366.1|H13|ENSMUSG00000019188.10|histocompatibility 13 	ENSMUST00000109825.1|H13|ENSMUSG00000019188.10|histocompatibility 13 	ENSMUST00000089059.2|H13|ENSMUSG00000019188.10|histocompatibility 13 	ENSMUST00000079247.3|H13|ENSMUSG00000019188.10|histocompatibility 13
mm10_v2_chr10_-_88605017_88605152	0.0355407	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000119185.1|Mybpc1|ENSMUSG00000020061.11|myosin binding protein C, slow-type 	ENSMUST00000121629.1|Mybpc1|ENSMUSG00000020061.11|myosin binding protein C, slow-type
mm10_v2_chr14_-_75754475_75754563	0.0355327	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000049168.7|Cog3|ENSMUSG00000034893.7|component of oligomeric golgi complex 3
mm10_v2_chr11_-_87359011_87359081	0.0354831	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000055438.4|Ppm1e|ENSMUSG00000046442.4|protein phosphatase 1E (PP2C domain containing)
mm10_v2_chrX_+_134686519_134686536	0.0345176	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000124226.2|Armcx4|ENSMUSG00000049804.9|armadillo repeat containing, X-linked 4
mm10_v2_chr19_+_23723279_23723279	0.034245	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000067077.1|Gm9938|ENSMUSG00000054178.1|predicted gene 9938
mm10_v2_chr11_+_51261719_51261731	0.0340843	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000130641.1|Clk4|ENSMUSG00000020385.10|CDC like kinase 4
mm10_v2_chr1_-_161070613_161070674	0.033963	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000035430.3|Dars2|ENSMUSG00000026709.4|aspartyl-tRNA synthetase 2 (mitochondrial)
mm10_v2_chr13_+_59585259_59585441	0.033577	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000168367.1|Naa35|ENSMUSG00000021555.8|N(alpha)-acetyltransferase 35, NatC auxiliary subunit 	ENSMUST00000022038.7|Naa35|ENSMUSG00000021555.8|N(alpha)-acetyltransferase 35, NatC auxiliary subunit 	ENSMUST00000166923.1|Naa35|ENSMUSG00000021555.8|N(alpha)-acetyltransferase 35, NatC auxiliary subunit
mm10_v2_chrX_-_106221145_106221169	0.0324763	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000113495.2|Taf9b|ENSMUSG00000047242.8|TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor
mm10_v2_chr2_+_69897255_69897303	0.031931	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000131553.1|Ubr3|ENSMUSG00000044308.11|ubiquitin protein ligase E3 component n-recognin 3
mm10_v2_chr3_+_40800778_40800786	0.0291029	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000169566.1|Plk4|ENSMUSG00000025758.5|polo-like kinase 4
mm10_v2_chr2_-_160619971_160619971	0.0290328	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000109473.1|Gm14221|ENSMUSG00000078956.2|predicted gene 14221
mm10_v2_chr14_-_31417666_31417678	0.0274984	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000100730.3|Sh3bp5|ENSMUSG00000021892.8|SH3-domain binding protein 5 (BTK-associated)
mm10_v2_chr15_+_81744848_81744848	0.0272752	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000109554.1|Zc3h7b|ENSMUSG00000022390.10|zinc finger CCCH type containing 7B
mm10_v2_chr12_-_12940600_12940616	0.0268015	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000130990.1|Mycn|ENSMUSG00000037169.8|v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian)
mm10_v2_chr17_+_36958623_36958641	0.0252971	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000173814.1|Znrd1as|ENSMUSG00000036214.7|Znrd1 antisense
mm10_v2_chrX_-_111536325_111536342	0.0232742	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000156639.1|Rps6ka6|ENSMUSG00000025665.10|ribosomal protein S6 kinase polypeptide 6
mm10_v2_chr17_+_26715644_26715724	0.0224657	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000062519.7|Crebrf|ENSMUSG00000048249.8|CREB3 regulatory factor 	ENSMUST00000144221.1|Crebrf|ENSMUSG00000048249.8|CREB3 regulatory factor 	ENSMUST00000142539.1|Crebrf|ENSMUSG00000048249.8|CREB3 regulatory factor 	ENSMUST00000151681.1|Crebrf|ENSMUSG00000048249.8|CREB3 regulatory factor
mm10_v2_chr11_-_98193260_98193298	0.022297	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000092735.5|Med1|ENSMUSG00000018160.9|mediator complex subunit 1 	ENSMUST00000107545.2|Med1|ENSMUSG00000018160.9|mediator complex subunit 1
mm10_v2_chr5_-_38480131_38480306	0.0220324	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000143758.1|Slc2a9|ENSMUSG00000005107.7|solute carrier family 2 (facilitated glucose transporter), member 9 	ENSMUST00000067886.5|Slc2a9|ENSMUSG00000005107.7|solute carrier family 2 (facilitated glucose transporter), member 9
mm10_v2_chr2_-_71367749_71367797	0.0211892	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000151937.1|Slc25a12|ENSMUSG00000027010.10|solute carrier family 25 (mitochondrial carrier, Aralar), member 12
mm10_v2_chr17_+_82539258_82539258	0.0201273	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000097278.3|Gm6594|ENSMUSG00000073371.3|predicted pseudogene 6594
mm10_v2_chr2_-_174346712_174346712	0.0200106	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000168292.1|Gm20721|ENSMUSG00000090625.1|predicted gene, 20721
mm10_v2_chr5_+_107497762_107497802	0.0182954	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000152474.1|A830010M20Rik|ENSMUSG00000044060.11|RIKEN cDNA A830010M20 gene 	ENSMUST00000060553.7|A830010M20Rik|ENSMUSG00000044060.11|RIKEN cDNA A830010M20 gene
mm10_v2_chr7_-_45830776_45830944	0.0177683	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000107723.2|Grwd1|ENSMUSG00000053801.10|glutamate-rich WD repeat containing 1 	ENSMUST00000131384.1|Grwd1|ENSMUSG00000053801.10|glutamate-rich WD repeat containing 1
mm10_v2_chr11_+_88047302_88047373	0.0172304	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000139129.2|Srsf1|ENSMUSG00000018379.11|serine/arginine-rich splicing factor 1
mm10_v2_chr4_+_22357543_22357618	0.0162028	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000039234.3|Fbxl4|ENSMUSG00000040410.8|F-box and leucine-rich repeat protein 4
mm10_v2_chr9_+_72958785_72958850	0.0151348	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000098567.2|Dyx1c1|ENSMUSG00000092192.1|dyslexia susceptibility 1 candidate 1 homolog (human) 	ENSMUST00000034734.8|Dyx1c1|ENSMUSG00000092192.1|dyslexia susceptibility 1 candidate 1 homolog (human)
mm10_v2_chr3_+_28263205_28263215	0.0147593	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000159236.2|Tnik|ENSMUSG00000027692.10|TRAF2 and NCK interacting kinase
mm10_v2_chr15_+_98092569_98092603	0.0140054	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000163507.1|Pfkm|ENSMUSG00000033065.7|phosphofructokinase, muscle
mm10_v2_chr3_+_55782500_55782521	0.0137978	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000075422.4|Mab21l1|ENSMUSG00000056947.4|mab-21-like 1 (C. elegans)
mm10_v2_chr4_+_134930898_134930997	0.0135515	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000030622.2|Syf2|ENSMUSG00000028821.2|SYF2 homolog, RNA splicing factor (S. cerevisiae)
mm10_v2_chr10_-_8886033_8886076	0.013251	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000015449.5|Sash1|ENSMUSG00000015305.5|SAM and SH3 domain containing 1
mm10_v2_chr15_-_9140374_9140451	0.0130311	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000096482.3|Skp2|ENSMUSG00000054115.5|S-phase kinase-associated protein 2 (p45) 	ENSMUST00000110585.2|Skp2|ENSMUSG00000054115.5|S-phase kinase-associated protein 2 (p45)
mm10_v2_chr2_-_116067391_116067444	0.012865	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000140185.1|2700033N17Rik|ENSMUSG00000086328.1|RIKEN cDNA 2700033N17 gene
mm10_v2_chr2_+_32606979_32607057	0.0125881	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000113289.1|St6galnac6|ENSMUSG00000026811.12|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6 	ENSMUST00000095044.3|St6galnac6|ENSMUSG00000026811.12|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6
mm10_v2_chr1_+_161070767_161070767	0.0119393	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000111618.1|Cenpl|ENSMUSG00000026708.10|centromere protein L 	ENSMUST00000111620.3|Cenpl|ENSMUSG00000026708.10|centromere protein L 	ENSMUST00000028035.7|Cenpl|ENSMUSG00000026708.10|centromere protein L
mm10_v2_chr1_-_4880669_4880699	0.00938467	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000078030.3|Gm6104|ENSMUSG00000062588.3|predicted gene 6104
mm10_v2_chr9_-_89705017_89705068	0.00709206	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000058488.6|Tmed3|ENSMUSG00000032353.7|transmembrane emp24 domain containing 3
mm10_v2_chr5_-_134946917_134946945	0.00638647	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000051401.2|Cldn4|ENSMUSG00000047501.2|claudin 4
mm10_v2_chr11_+_86484647_86484716	0.00601981	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000020827.6|Rnft1|ENSMUSG00000020521.7|ring finger protein, transmembrane 1
mm10_v2_chr17_+_34305883_34305909	0.00596765	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000074557.8|H2-Eb1|ENSMUSG00000060586.9|histocompatibility 2, class II antigen E beta
mm10_v2_chrX_-_143933204_143933311	0.00562464	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000112851.1|Dcx|ENSMUSG00000031285.8|doublecortin 	ENSMUST00000112856.2|Dcx|ENSMUSG00000031285.8|doublecortin 	ENSMUST00000033642.3|Dcx|ENSMUSG00000031285.8|doublecortin
mm10_v2_chr17_-_26099257_26099259	0.00529897	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000053575.3|Gm8186|ENSMUSG00000049124.3|predicted gene 8186
mm10_v2_chr10_+_63024512_63024512	0.00503444	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000020262.4|Pbld2|ENSMUSG00000020068.4|phenazine biosynthesis-like protein domain containing 2
mm10_v2_chr9_+_119063429_119063467	0.0018956	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000141185.1|Vill|ENSMUSG00000038775.8|villin-like 	ENSMUST00000126251.1|Vill|ENSMUSG00000038775.8|villin-like 	ENSMUST00000136561.1|Vill|ENSMUSG00000038775.8|villin-like
