mm10_v2_chrX_+_114474312_114474353	0.92668	Pax3	ENSMUST00000113371.1|Klhl4|ENSMUSG00000025597.7|kelch-like 4 	ENSMUST00000040504.5|Klhl4|ENSMUSG00000025597.7|kelch-like 4
mm10_v2_chr12_+_38780284_38780349	0.573509	Pax3	ENSMUST00000162563.1|Etv1|ENSMUSG00000004151.10|ets variant gene 1 	ENSMUST00000161164.1|Etv1|ENSMUSG00000004151.10|ets variant gene 1 	ENSMUST00000160996.1|Etv1|ENSMUSG00000004151.10|ets variant gene 1
mm10_v2_chr12_+_38781093_38781129	0.562648	Pax3	ENSMUST00000161513.1|Etv1|ENSMUSG00000004151.10|ets variant gene 1
mm10_v2_chr12_+_38780817_38780854	0.49571	Pax3	ENSMUST00000160856.1|Etv1|ENSMUSG00000004151.10|ets variant gene 1
mm10_v2_chr7_+_30121915_30122001	0.473662	Pax3	ENSMUST00000098596.3|Zfp382|ENSMUSG00000074220.3|zinc finger protein 382 	ENSMUST00000153792.1|Zfp382|ENSMUSG00000074220.3|zinc finger protein 382
mm10_v2_chr8_-_71043040_71043040	0.431046	Pax3	ENSMUST00000170101.1|Gm17576|ENSMUSG00000091388.1|predicted gene, 17576
mm10_v2_chr4_+_127077374_127077461	0.428994	Pax3	ENSMUST00000046751.6|Zmym6|ENSMUSG00000042408.7|zinc finger, MYM-type 6 	ENSMUST00000094713.3|Zmym6|ENSMUSG00000042408.7|zinc finger, MYM-type 6
mm10_v2_chrX_-_103623648_103623672	0.418174	Pax3	ENSMUST00000156211.1|Ftx|ENSMUSG00000086370.2|Ftx transcript, Xist regulator (non-protein coding)
mm10_v2_chrX_-_103623704_103623762	0.366781	Pax3	ENSMUST00000130063.1|Ftx|ENSMUSG00000086370.2|Ftx transcript, Xist regulator (non-protein coding) 	ENSMUST00000125419.1|Ftx|ENSMUSG00000086370.2|Ftx transcript, Xist regulator (non-protein coding)
mm10_v2_chr10_-_70592782_70592848	0.309588	Pax3	ENSMUST00000162251.1|Phyhipl|ENSMUSG00000037747.3|phytanoyl-CoA hydroxylase interacting protein-like
mm10_v2_chr10_+_82138253_82138253	0.297824	Pax3	ENSMUST00000105314.2|AU041133|ENSMUSG00000078435.2|expressed sequence AU041133
mm10_v2_chr3_+_36159522_36159522	0.289831	Pax3	ENSMUST00000165956.2|D3Ertd254e|ENSMUSG00000033883.7|DNA segment, Chr 3, ERATO Doi 254, expressed
mm10_v2_chr1_+_87404916_87404964	0.266547	Pax3	ENSMUST00000173152.1|Gigyf2|ENSMUSG00000048000.9|GRB10 interacting GYF protein 2 	ENSMUST00000173663.1|Gigyf2|ENSMUSG00000048000.9|GRB10 interacting GYF protein 2
mm10_v2_chr3_-_59262825_59262851	0.26225	Pax3	ENSMUST00000050360.7|P2ry12|ENSMUSG00000036353.7|purinergic receptor P2Y, G-protein coupled 12
mm10_v2_chr2_-_136387929_136387985	0.251242	Pax3	ENSMUST00000035264.2|Pak7|ENSMUSG00000039913.6|p21 protein (Cdc42/Rac)-activated kinase 7 	ENSMUST00000077200.3|Pak7|ENSMUSG00000039913.6|p21 protein (Cdc42/Rac)-activated kinase 7
mm10_v2_chr12_+_109540979_109541007	0.238955	Pax3	ENSMUST00000129245.1|Meg3|ENSMUSG00000021268.11|maternally expressed 3 	ENSMUST00000143836.1|Meg3|ENSMUSG00000021268.11|maternally expressed 3 	ENSMUST00000124106.1|Meg3|ENSMUSG00000021268.11|maternally expressed 3
mm10_v2_chr4_-_25281801_25281830	0.231549	Pax3	ENSMUST00000102994.3|Ufl1|ENSMUSG00000040359.8|UFM1 specific ligase 1
mm10_v2_chr12_+_52699297_52699411	0.231228	Pax3	ENSMUST00000095737.3|Akap6|ENSMUSG00000061603.7|A kinase (PRKA) anchor protein 6
mm10_v2_chr8_+_71887264_71887264	0.202586	Pax3	ENSMUST00000034259.7|Zfp709|ENSMUSG00000056019.6|zinc finger protein 709
mm10_v2_chr2_+_102659213_102659281	0.194688	Pax3	ENSMUST00000111213.1|Slc1a2|ENSMUSG00000005089.9|solute carrier family 1 (glial high affinity glutamate transporter), member 2
mm10_v2_chr13_-_21716143_21716189	0.193234	Pax3	ENSMUST00000091756.1|Hist1h2bl|ENSMUSG00000094338.1|histone cluster 1, H2bl
mm10_v2_chr16_-_32877723_32877766	0.179521	Pax3	ENSMUST00000119810.1|1700021K19Rik|ENSMUSG00000035629.11|RIKEN cDNA 1700021K19 gene
mm10_v2_chr8_+_33428709_33428709	0.176505	Pax3	ENSMUST00000059351.7|5930422O12Rik|ENSMUSG00000048544.8|RIKEN cDNA 5930422O12 gene
mm10_v2_chr18_+_35562158_35562174	0.165204	Pax3	ENSMUST00000166793.1|Matr3|ENSMUSG00000037236.8|matrin 3
mm10_v2_chr16_-_88056176_88056176	0.149555	Pax3	ENSMUST00000072256.5|Grik1|ENSMUSG00000022935.8|glutamate receptor, ionotropic, kainate 1 	ENSMUST00000023652.8|Grik1|ENSMUSG00000022935.8|glutamate receptor, ionotropic, kainate 1 	ENSMUST00000114137.1|Grik1|ENSMUSG00000022935.8|glutamate receptor, ionotropic, kainate 1
mm10_v2_chr4_-_25281752_25281800	0.140921	Pax3	ENSMUST00000038705.7|Ufl1|ENSMUSG00000040359.8|UFM1 specific ligase 1
mm10_v2_chr16_+_32877775_32877831	0.133648	Pax3	ENSMUST00000023489.4|Fyttd1|ENSMUSG00000022800.7|forty-two-three domain containing 1 	ENSMUST00000171325.1|Fyttd1|ENSMUSG00000022800.7|forty-two-three domain containing 1
mm10_v2_chr2_+_133552159_133552237	0.11735	Pax3	ENSMUST00000028836.6|Bmp2|ENSMUSG00000027358.6|bone morphogenetic protein 2
mm10_v2_chr1_+_176814660_176814660	0.117342	Pax3	ENSMUST00000056773.8|Sdccag8|ENSMUSG00000026504.11|serologically defined colon cancer antigen 8 	ENSMUST00000027785.8|Sdccag8|ENSMUSG00000026504.11|serologically defined colon cancer antigen 8
mm10_v2_chrX_+_159840463_159840481	0.102519	Pax3	ENSMUST00000112451.1|Sh3kbp1|ENSMUSG00000040990.11|SH3-domain kinase binding protein 1 	ENSMUST00000112453.2|Sh3kbp1|ENSMUSG00000040990.11|SH3-domain kinase binding protein 1
mm10_v2_chr13_+_14630237_14630296	0.0832681	Pax3	ENSMUST00000178289.1|AW209491|ENSMUSG00000039182.5|expressed sequence AW209491 	ENSMUST00000038690.4|AW209491|ENSMUSG00000039182.5|expressed sequence AW209491
mm10_v2_chr17_+_87107621_87107684	0.0807691	Pax3	ENSMUST00000041369.6|Socs5|ENSMUSG00000037104.8|suppressor of cytokine signaling 5
mm10_v2_chr11_-_50292302_50292363	0.0690853	Pax3	ENSMUST00000059458.4|Maml1|ENSMUSG00000050567.10|mastermind like 1 (Drosophila)
mm10_v2_chr17_+_21691860_21691860	0.0525806	Pax3	ENSMUST00000072133.4|Gm10226|ENSMUSG00000067929.3|predicted gene 10226
mm10_v2_chr9_+_64235201_64235201	0.0433547	Pax3	ENSMUST00000039011.3|Uchl4|ENSMUSG00000035337.3|ubiquitin carboxyl-terminal esterase L4
mm10_v2_chr4_+_11486002_11486045	0.0288252	Pax3	ENSMUST00000108307.2|1110037F02Rik|ENSMUSG00000040720.9|RIKEN cDNA 1110037F02 gene
mm10_v2_chr11_+_3649759_3649759	0.0226611	Pax3	ENSMUST00000140242.1|Morc2a|ENSMUSG00000034543.8|microrchidia 2A
