mm10_v2_chr14_+_99298652_99298715	2.33467	Pitx1	ENSMUST00000005279.6|Klf5|ENSMUSG00000005148.7|Kruppel-like factor 5
mm10_v2_chr4_-_64046925_64047015	2.10162	Pitx1	ENSMUST00000107377.3|Tnc|ENSMUSG00000028364.9|tenascin C
mm10_v2_chrX_+_169879596_169879664	1.84615	Pitx1	ENSMUST00000112105.1|Mid1|ENSMUSG00000035299.10|midline 1 	ENSMUST00000078947.5|Mid1|ENSMUSG00000035299.10|midline 1
mm10_v2_chr1_+_167598450_167598480	1.75466	Pitx1	ENSMUST00000111386.1|Rxrg|ENSMUSG00000015843.4|retinoid X receptor gamma 	ENSMUST00000111384.1|Rxrg|ENSMUSG00000015843.4|retinoid X receptor gamma
mm10_v2_chr4_+_144892813_144892835	1.69884	Pitx1	ENSMUST00000105744.1|Dhrs3|ENSMUSG00000066026.8|dehydrogenase/reductase (SDR family) member 3 	ENSMUST00000171001.1|Dhrs3|ENSMUSG00000066026.8|dehydrogenase/reductase (SDR family) member 3
mm10_v2_chrX_+_169685191_169685250	1.67427	Pitx1	ENSMUST00000112104.1|Mid1|ENSMUSG00000035299.10|midline 1 	ENSMUST00000112107.1|Mid1|ENSMUSG00000035299.10|midline 1
mm10_v2_chr3_+_95526777_95526797	1.55439	Pitx1	ENSMUST00000015667.2|Ctss|ENSMUSG00000038642.4|cathepsin S 	ENSMUST00000116304.2|Ctss|ENSMUSG00000038642.4|cathepsin S
mm10_v2_chr4_+_144893077_144893103	1.43172	Pitx1	ENSMUST00000154208.1|Dhrs3|ENSMUSG00000066026.8|dehydrogenase/reductase (SDR family) member 3
mm10_v2_chr10_+_21993890_21993955	1.36114	Pitx1	ENSMUST00000092673.4|Sgk1|ENSMUSG00000019970.9|serum/glucocorticoid regulated kinase 1
mm10_v2_chr6_+_108213086_108213123	1.35082	Pitx1	ENSMUST00000032192.6|Itpr1|ENSMUSG00000030102.8|inositol 1,4,5-trisphosphate receptor 1
mm10_v2_chr1_+_167598384_167598411	1.31501	Pitx1	ENSMUST00000015987.3|Rxrg|ENSMUSG00000015843.4|retinoid X receptor gamma
mm10_v2_chr19_+_8617991_8618000	1.2826	Pitx1	ENSMUST00000010250.2|Slc22a6|ENSMUSG00000024650.4|solute carrier family 22 (organic anion transporter), member 6
mm10_v2_chr13_-_97747373_97747384	1.18125	Pitx1	ENSMUST00000123535.1|5330416C01Rik|ENSMUSG00000054944.7|RIKEN cDNA 5330416C01 gene
mm10_v2_chr15_-_79164477_79164496	1.1645	Pitx1	ENSMUST00000040019.4|Sox10|ENSMUSG00000033006.9|SRY-box containing gene 10
mm10_v2_chr4_+_144893127_144893151	1.13059	Pitx1	ENSMUST00000142808.1|Dhrs3|ENSMUSG00000066026.8|dehydrogenase/reductase (SDR family) member 3
mm10_v2_chr19_-_47919269_47919305	1.11861	Pitx1	ENSMUST00000095998.5|Itprip|ENSMUSG00000079254.3|inositol 1,4,5-triphosphate receptor interacting protein
mm10_v2_chr8_-_46294592_46294671	1.11796	Pitx1	ENSMUST00000058636.7|Helt|ENSMUSG00000047171.7|helt bHLH transcription factor
mm10_v2_chr8_+_127063893_127063916	1.09999	Pitx1	ENSMUST00000162309.1|Pard3|ENSMUSG00000025812.11|par-3 (partitioning defective 3) homolog (C. elegans)
mm10_v2_chr8_+_127064022_127064086	1.06613	Pitx1	ENSMUST00000160272.1|Pard3|ENSMUSG00000025812.11|par-3 (partitioning defective 3) homolog (C. elegans) 	ENSMUST00000079777.5|Pard3|ENSMUSG00000025812.11|par-3 (partitioning defective 3) homolog (C. elegans) 	ENSMUST00000162907.1|Pard3|ENSMUSG00000025812.11|par-3 (partitioning defective 3) homolog (C. elegans)
mm10_v2_chr7_-_4752972_4753094	1.02076	Pitx1	ENSMUST00000183971.1|Cox6b2|ENSMUSG00000051811.8|cytochrome c oxidase subunit VIb polypeptide 2 	ENSMUST00000182173.1|Cox6b2|ENSMUSG00000051811.8|cytochrome c oxidase subunit VIb polypeptide 2 	ENSMUST00000182738.1|Cox6b2|ENSMUSG00000051811.8|cytochrome c oxidase subunit VIb polypeptide 2 	ENSMUST00000184143.1|Cox6b2|ENSMUSG00000051811.8|cytochrome c oxidase subunit VIb polypeptide 2 	ENSMUST00000182111.1|Cox6b2|ENSMUSG00000051811.8|cytochrome c oxidase subunit VIb polypeptide 2 	ENSMUST00000182048.1|Cox6b2|ENSMUSG00000051811.8|cytochrome c oxidase subunit VIb polypeptide 2 	ENSMUST00000063324.7|Cox6b2|ENSMUSG00000051811.8|cytochrome c oxidase subunit VIb polypeptide 2
mm10_v2_chr12_+_58211772_58211804	1.00261	Pitx1	ENSMUST00000110671.2|Sstr1|ENSMUSG00000035431.4|somatostatin receptor 1 	ENSMUST00000044299.2|Sstr1|ENSMUSG00000035431.4|somatostatin receptor 1
mm10_v2_chr3_-_33083016_33083046	0.937349	Pitx1	ENSMUST00000078226.3|Pex5l|ENSMUSG00000027674.10|peroxisomal biogenesis factor 5-like 	ENSMUST00000108224.1|Pex5l|ENSMUSG00000027674.10|peroxisomal biogenesis factor 5-like
mm10_v2_chr18_+_60925612_60925639	0.920105	Pitx1	ENSMUST00000102888.3|Camk2a|ENSMUSG00000024617.10|calcium/calmodulin-dependent protein kinase II alpha 	ENSMUST00000025519.4|Camk2a|ENSMUSG00000024617.10|calcium/calmodulin-dependent protein kinase II alpha
mm10_v2_chr9_+_50617516_50617561	0.717693	Pitx1	ENSMUST00000141366.1|Pih1d2|ENSMUSG00000000167.8|PIH1 domain containing 2
mm10_v2_chr14_+_26122609_26122609	0.68261	Pitx1	ENSMUST00000100810.6|Duxbl2|ENSMUSG00000072675.6|doubl homeobox B-like 2
mm10_v2_chr12_+_81631369_81631394	0.678071	Pitx1	ENSMUST00000036116.5|Ttc9|ENSMUSG00000042734.5|tetratricopeptide repeat domain 9
mm10_v2_chr13_-_116309639_116309699	0.669377	Pitx1	ENSMUST00000036060.6|Isl1|ENSMUSG00000042258.7|ISL1 transcription factor, LIM/homeodomain
mm10_v2_chr3_-_8964037_8964101	0.663529	Pitx1	ENSMUST00000091354.5|Tpd52|ENSMUSG00000027506.9|tumor protein D52 	ENSMUST00000094381.4|Tpd52|ENSMUSG00000027506.9|tumor protein D52
mm10_v2_chr14_+_64588112_64588120	0.66236	Pitx1	ENSMUST00000181808.1|A930011O12Rik|ENSMUSG00000097545.1|RIKEN cDNA A930011O12 gene
mm10_v2_chr7_+_30553263_30553272	0.622776	Pitx1	ENSMUST00000044048.7|Hspb6|ENSMUSG00000036854.8|heat shock protein, alpha-crystallin-related, B6
mm10_v2_chr1_+_177444653_177444669	0.60439	Pitx1	ENSMUST00000094276.3|Zbtb18|ENSMUSG00000063659.6|zinc finger and BTB domain containing 18
mm10_v2_chr10_+_80329953_80329987	0.601836	Pitx1	ENSMUST00000105358.1|Reep6|ENSMUSG00000035504.10|receptor accessory protein 6 	ENSMUST00000105357.1|Reep6|ENSMUSG00000035504.10|receptor accessory protein 6 	ENSMUST00000105354.1|Reep6|ENSMUSG00000035504.10|receptor accessory protein 6 	ENSMUST00000105355.1|Reep6|ENSMUSG00000035504.10|receptor accessory protein 6
mm10_v2_chr19_-_36919606_36919622	0.60098	Pitx1	ENSMUST00000057337.7|Fgfbp3|ENSMUSG00000047632.10|fibroblast growth factor binding protein 3
mm10_v2_chr14_+_25983005_25983005	0.594941	Pitx1	ENSMUST00000049793.8|Duxbl1|ENSMUSG00000048502.8|double homeobox B-like 1
mm10_v2_chr5_-_125294107_125294136	0.593663	Pitx1	ENSMUST00000127148.1|Scarb1|ENSMUSG00000037936.9|scavenger receptor class B, member 1
mm10_v2_chr7_-_15879844_15879968	0.581256	Pitx1	ENSMUST00000172758.1|Crx|ENSMUSG00000041578.9|cone-rod homeobox containing gene 	ENSMUST00000044434.6|Crx|ENSMUSG00000041578.9|cone-rod homeobox containing gene
mm10_v2_chr16_-_10313940_10313968	0.572793	Pitx1	ENSMUST00000078357.4|Emp2|ENSMUSG00000022505.8|epithelial membrane protein 2
mm10_v2_chr19_-_32196393_32196428	0.56906	Pitx1	ENSMUST00000151822.1|Sgms1|ENSMUSG00000040451.11|sphingomyelin synthase 1
mm10_v2_chr3_-_113630068_113630149	0.54709	Pitx1	ENSMUST00000092154.3|Rnpc3|ENSMUSG00000027981.8|RNA-binding region (RNP1, RRM) containing 3 	ENSMUST00000106536.1|Rnpc3|ENSMUSG00000027981.8|RNA-binding region (RNP1, RRM) containing 3 	ENSMUST00000106535.1|Rnpc3|ENSMUSG00000027981.8|RNA-binding region (RNP1, RRM) containing 3
mm10_v2_chr18_+_36365774_36365785	0.542577	Pitx1	ENSMUST00000144158.1|Cystm1|ENSMUSG00000046727.6|cysteine-rich transmembrane module containing 1
mm10_v2_chr4_-_156255327_156255344	0.537836	Pitx1	ENSMUST00000179919.1|Samd11|ENSMUSG00000096351.1|sterile alpha motif domain containing 11
mm10_v2_chr2_+_119325784_119325817	0.525942	Pitx1	ENSMUST00000102517.3|Dll4|ENSMUSG00000027314.6|delta-like 4 (Drosophila)
mm10_v2_chr18_+_60925644_60925725	0.525601	Pitx1	ENSMUST00000115297.1|Camk2a|ENSMUSG00000024617.10|calcium/calmodulin-dependent protein kinase II alpha
mm10_v2_chrX_+_56779699_56779819	0.517842	Pitx1	ENSMUST00000114772.2|Fhl1|ENSMUSG00000023092.10|four and a half LIM domains 1 	ENSMUST00000114768.3|Fhl1|ENSMUSG00000023092.10|four and a half LIM domains 1 	ENSMUST00000155882.1|Fhl1|ENSMUSG00000023092.10|four and a half LIM domains 1
mm10_v2_chr18_+_73863672_73863713	0.509696	Pitx1	ENSMUST00000134847.1|Mro|ENSMUSG00000064036.9|maestro
mm10_v2_chr10_+_128225830_128225845	0.509648	Pitx1	ENSMUST00000026455.7|Mip|ENSMUSG00000025389.7|major intrinsic protein of eye lens fiber
mm10_v2_chr3_+_136670076_136670186	0.500455	Pitx1	ENSMUST00000070198.7|Ppp3ca|ENSMUSG00000028161.11|protein phosphatase 3, catalytic subunit, alpha isoform
mm10_v2_chr2_+_38341068_38341092	0.49557	Pitx1	ENSMUST00000133661.1|Lhx2|ENSMUSG00000000247.5|LIM homeobox protein 2
mm10_v2_chr6_+_121300227_121300297	0.494903	Pitx1	ENSMUST00000064580.7|Slc6a13|ENSMUSG00000030108.8|solute carrier family 6 (neurotransmitter transporter, GABA), member 13
mm10_v2_chrX_+_56779437_56779565	0.487227	Pitx1	ENSMUST00000114773.3|Fhl1|ENSMUSG00000023092.10|four and a half LIM domains 1
mm10_v2_chr2_+_14388316_14388420	0.484373	Pitx1	ENSMUST00000114731.1|Slc39a12|ENSMUSG00000036949.10|solute carrier family 39 (zinc transporter), member 12 	ENSMUST00000082290.7|Slc39a12|ENSMUSG00000036949.10|solute carrier family 39 (zinc transporter), member 12
mm10_v2_chr17_+_34969912_34969912	0.482717	Pitx1	ENSMUST00000173680.1|Gm20481|ENSMUSG00000092609.1|predicted gene 20481
mm10_v2_chr13_-_97747399_97747414	0.477787	Pitx1	ENSMUST00000144993.1|5330416C01Rik|ENSMUSG00000054944.7|RIKEN cDNA 5330416C01 gene
mm10_v2_chr6_-_35308110_35308136	0.476736	Pitx1	ENSMUST00000031868.4|Slc13a4|ENSMUSG00000029843.4|solute carrier family 13 (sodium/sulfate symporters), member 4
mm10_v2_chr10_-_127189981_127190071	0.473108	Pitx1	ENSMUST00000019611.7|Arhgef25|ENSMUSG00000019467.7|Rho guanine nucleotide exchange factor (GEF) 25
mm10_v2_chr7_+_82175156_82175199	0.46981	Pitx1	ENSMUST00000180243.1|Sh3gl3|ENSMUSG00000030638.7|SH3-domain GRB2-like 3
mm10_v2_chr4_-_137766474_137766501	0.469209	Pitx1	ENSMUST00000139951.1|Alpl|ENSMUSG00000028766.4|alkaline phosphatase, liver/bone/kidney
mm10_v2_chr4_+_15881255_15881272	0.46818	Pitx1	ENSMUST00000029876.1|Calb1|ENSMUSG00000028222.2|calbindin 1
mm10_v2_chr19_-_12765447_12765632	0.458939	Pitx1	ENSMUST00000112933.1|Cntf|ENSMUSG00000079415.2|ciliary neurotrophic factor
mm10_v2_chr3_-_84270782_84270794	0.457722	Pitx1	ENSMUST00000054990.4|Trim2|ENSMUSG00000027993.10|tripartite motif-containing 2
mm10_v2_chr14_-_54926784_54926805	0.454115	Pitx1	ENSMUST00000022813.6|Efs|ENSMUSG00000022203.6|embryonal Fyn-associated substrate
mm10_v2_chr3_-_33082004_33082068	0.450392	Pitx1	ENSMUST00000108225.3|Pex5l|ENSMUSG00000027674.10|peroxisomal biogenesis factor 5-like
mm10_v2_chr11_+_70459940_70460137	0.447946	Pitx1	ENSMUST00000147289.1|Zmynd15|ENSMUSG00000040829.8|zinc finger, MYND-type containing 15 	ENSMUST00000126105.1|Zmynd15|ENSMUSG00000040829.8|zinc finger, MYND-type containing 15
mm10_v2_chr13_+_3361029_3361029	0.437769	Pitx1	ENSMUST00000179981.1|Gm16505|ENSMUSG00000096107.1|predicted gene 16505
mm10_v2_chr4_-_155010984_155011026	0.432481	Pitx1	ENSMUST00000105631.2|Plch2|ENSMUSG00000029055.11|phospholipase C, eta 2 	ENSMUST00000139976.2|Plch2|ENSMUSG00000029055.11|phospholipase C, eta 2 	ENSMUST00000145662.2|Plch2|ENSMUSG00000029055.11|phospholipase C, eta 2
mm10_v2_chr18_+_36281069_36281151	0.428938	Pitx1	ENSMUST00000051301.3|Pura|ENSMUSG00000043991.3|purine rich element binding protein A
mm10_v2_chr16_+_8470763_8470807	0.423101	Pitx1	ENSMUST00000046470.9|Mettl22|ENSMUSG00000039345.9|methyltransferase like 22 	ENSMUST00000150790.1|Mettl22|ENSMUSG00000039345.9|methyltransferase like 22 	ENSMUST00000142899.1|Mettl22|ENSMUSG00000039345.9|methyltransferase like 22
mm10_v2_chr11_+_116657106_116657117	0.418765	Pitx1	ENSMUST00000116318.2|Gm11744|ENSMUSG00000075410.6|predicted gene 11744
mm10_v2_chr6_+_17749170_17749265	0.400919	Pitx1	ENSMUST00000053148.7|St7|ENSMUSG00000029534.11|suppression of tumorigenicity 7 	ENSMUST00000115417.3|St7|ENSMUSG00000029534.11|suppression of tumorigenicity 7
mm10_v2_chr15_+_18818895_18818947	0.392746	Pitx1	ENSMUST00000166873.2|Cdh10|ENSMUSG00000022321.9|cadherin 10
mm10_v2_chr3_-_57294880_57294899	0.381701	Pitx1	ENSMUST00000171384.1|Tm4sf1|ENSMUSG00000027800.8|transmembrane 4 superfamily member 1
mm10_v2_chrX_+_134585644_134585698	0.359542	Pitx1	ENSMUST00000113211.1|Rpl36a|ENSMUSG00000079435.3|ribosomal protein L36A
mm10_v2_chr5_+_3344194_3344312	0.358836	Pitx1	ENSMUST00000042410.4|Cdk6|ENSMUSG00000040274.5|cyclin-dependent kinase 6
mm10_v2_chr5_+_137787769_137787807	0.353432	Pitx1	ENSMUST00000035852.7|Zcwpw1|ENSMUSG00000037108.7|zinc finger, CW type with PWWP domain 1
mm10_v2_chr7_+_16781341_16781352	0.34035	Pitx1	ENSMUST00000108496.2|Slc1a5|ENSMUSG00000001918.11|solute carrier family 1 (neutral amino acid transporter), member 5
mm10_v2_chr13_+_63014934_63014934	0.337799	Pitx1	ENSMUST00000091560.4|2010111I01Rik|ENSMUSG00000021458.10|RIKEN cDNA 2010111I01 gene
mm10_v2_chr17_-_58991343_58991375	0.322644	Pitx1	ENSMUST00000025064.7|2610034M16Rik|ENSMUSG00000024227.8|RIKEN cDNA 2610034M16 gene
mm10_v2_chr1_-_191907527_191907527	0.311076	Pitx1	ENSMUST00000069573.5|1700034H15Rik|ENSMUSG00000055833.8|RIKEN cDNA 1700034H15 gene
mm10_v2_chr18_-_15718046_15718046	0.306062	Pitx1	ENSMUST00000053017.6|Chst9|ENSMUSG00000047161.6|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9
mm10_v2_chr2_+_120476911_120476976	0.30401	Pitx1	ENSMUST00000110716.1|Capn3|ENSMUSG00000079110.5|calpain 3 	ENSMUST00000028748.6|Capn3|ENSMUSG00000079110.5|calpain 3 	ENSMUST00000090028.5|Capn3|ENSMUSG00000079110.5|calpain 3 	ENSMUST00000110719.2|Capn3|ENSMUSG00000079110.5|calpain 3
mm10_v2_chr7_-_127725616_127725616	0.301066	Pitx1	ENSMUST00000076091.2|Ctf2|ENSMUSG00000060034.4|cardiotrophin 2
mm10_v2_chr10_+_19951055_19951055	0.293241	Pitx1	ENSMUST00000152533.1|Map3k5|ENSMUSG00000071369.4|mitogen-activated protein kinase kinase kinase 5
mm10_v2_chr4_+_109343029_109343081	0.292264	Pitx1	ENSMUST00000030281.5|Eps15|ENSMUSG00000028552.7|epidermal growth factor receptor pathway substrate 15
mm10_v2_chr1_+_74542881_74542918	0.283232	Pitx1	ENSMUST00000113749.1|Plcd4|ENSMUSG00000026173.9|phospholipase C, delta 4 	ENSMUST00000067916.6|Plcd4|ENSMUSG00000026173.9|phospholipase C, delta 4 	ENSMUST00000113745.1|Plcd4|ENSMUSG00000026173.9|phospholipase C, delta 4 	ENSMUST00000113747.1|Plcd4|ENSMUSG00000026173.9|phospholipase C, delta 4 	ENSMUST00000113750.1|Plcd4|ENSMUSG00000026173.9|phospholipase C, delta 4
mm10_v2_chr7_-_13034722_13034782	0.268348	Pitx1	ENSMUST00000005711.4|Chmp2a|ENSMUSG00000033916.4|charged multivesicular body protein 2A
mm10_v2_chr11_+_87578384_87578470	0.259801	Pitx1	ENSMUST00000107962.1|Sept4|ENSMUSG00000020486.12|septin 4 	ENSMUST00000122067.1|Sept4|ENSMUSG00000020486.12|septin 4
mm10_v2_chr9_+_31030621_31030700	0.255189	Pitx1	ENSMUST00000115222.2|Zbtb44|ENSMUSG00000047412.9|zinc finger and BTB domain containing 44
mm10_v2_chr4_+_84884418_84884465	0.254139	Pitx1	ENSMUST00000169371.2|Cntln|ENSMUSG00000038070.9|centlein, centrosomal protein
mm10_v2_chr17_-_57059795_57059863	0.25223	Pitx1	ENSMUST00000040280.7|Slc25a23|ENSMUSG00000046329.8|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 23
mm10_v2_chr3_+_136670679_136670770	0.25157	Pitx1	ENSMUST00000056758.8|Ppp3ca|ENSMUSG00000028161.11|protein phosphatase 3, catalytic subunit, alpha isoform
mm10_v2_chr6_+_3993776_3993797	0.250252	Pitx1	ENSMUST00000031673.5|Gngt1|ENSMUSG00000029663.5|guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 1
mm10_v2_chr10_-_127288999_127289035	0.246745	Pitx1	ENSMUST00000119078.1|Mbd6|ENSMUSG00000025409.8|methyl-CpG binding domain protein 6
mm10_v2_chr10_+_25408346_25408395	0.242999	Pitx1	ENSMUST00000092645.6|Epb4.1l2|ENSMUSG00000019978.9|erythrocyte protein band 4.1-like 2
mm10_v2_chr10_-_127288851_127288918	0.241158	Pitx1	ENSMUST00000156208.1|Mbd6|ENSMUSG00000025409.8|methyl-CpG binding domain protein 6 	ENSMUST00000026476.6|Mbd6|ENSMUSG00000025409.8|methyl-CpG binding domain protein 6
mm10_v2_chr4_+_116708687_116708704	0.239387	Pitx1	ENSMUST00000135499.1|Ccdc163|ENSMUSG00000028689.8|coiled-coil domain containing 163
mm10_v2_chr10_-_22149270_22149270	0.237616	Pitx1	ENSMUST00000179054.1|E030030I06Rik|ENSMUSG00000055657.8|RIKEN cDNA E030030I06 gene 	ENSMUST00000069372.6|E030030I06Rik|ENSMUSG00000055657.8|RIKEN cDNA E030030I06 gene
mm10_v2_chr10_+_80292453_80292645	0.222146	Pitx1	ENSMUST00000068408.7|Rps15|ENSMUSG00000063457.8|ribosomal protein S15 	ENSMUST00000062674.6|Rps15|ENSMUSG00000063457.8|ribosomal protein S15
mm10_v2_chr18_+_37447641_37447674	0.208785	Pitx1	ENSMUST00000052387.3|Pcdhb14|ENSMUSG00000044043.3|protocadherin beta 14
mm10_v2_chr7_-_80403315_80403339	0.208267	Pitx1	ENSMUST00000147150.1|Furin|ENSMUSG00000030530.9|furin (paired basic amino acid cleaving enzyme)
mm10_v2_chr5_+_8422831_8422906	0.208037	Pitx1	ENSMUST00000066921.3|Slc25a40|ENSMUSG00000054099.5|solute carrier family 25, member 40
mm10_v2_chr18_+_37320374_37320401	0.206273	Pitx1	ENSMUST00000078271.2|Pcdhb5|ENSMUSG00000063687.2|protocadherin beta 5
mm10_v2_chrM_+_8600_8616	0.197962	Pitx1	ENSMUST00000082409.1|mt-Co3|ENSMUSG00000064358.1|mitochondrially encoded cytochrome c oxidase III
mm10_v2_chrX_+_7909542_7909542	0.192632	Pitx1	ENSMUST00000086274.2|Gm10490|ENSMUSG00000073290.1|predicted gene 10490
mm10_v2_chr13_-_113618549_113618565	0.188218	Pitx1	ENSMUST00000109241.3|Snx18|ENSMUSG00000042364.10|sorting nexin 18
mm10_v2_chr9_+_58134535_58134810	0.185692	Pitx1	ENSMUST00000128378.1|Stra6|ENSMUSG00000032327.8|stimulated by retinoic acid gene 6 	ENSMUST00000150820.1|Stra6|ENSMUSG00000032327.8|stimulated by retinoic acid gene 6 	ENSMUST00000167479.1|Stra6|ENSMUSG00000032327.8|stimulated by retinoic acid gene 6 	ENSMUST00000134450.1|Stra6|ENSMUSG00000032327.8|stimulated by retinoic acid gene 6
mm10_v2_chr17_-_24073479_24073490	0.183648	Pitx1	ENSMUST00000017090.5|Kctd5|ENSMUSG00000016946.5|potassium channel tetramerisation domain containing 5
mm10_v2_chr5_+_64159429_64159451	0.182632	Pitx1	ENSMUST00000043893.6|Tbc1d1|ENSMUSG00000029174.12|TBC1 domain family, member 1
mm10_v2_chr7_+_5062143_5062241	0.181048	Pitx1	ENSMUST00000005041.7|U2af2|ENSMUSG00000030435.9|U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 2
mm10_v2_chr7_+_13398115_13398132	0.180886	Pitx1	ENSMUST00000005791.7|Cabp5|ENSMUSG00000005649.11|calcium binding protein 5
mm10_v2_chr6_-_122340200_122340244	0.180563	Pitx1	ENSMUST00000159384.1|Phc1|ENSMUSG00000040669.8|polyhomeotic-like 1 (Drosophila)
mm10_v2_chr16_+_90831113_90831150	0.179196	Pitx1	ENSMUST00000037539.7|Eva1c|ENSMUSG00000039903.10|eva-1 homolog C (C. elegans) 	ENSMUST00000099543.3|Eva1c|ENSMUSG00000039903.10|eva-1 homolog C (C. elegans)
mm10_v2_chr16_-_31081363_31081439	0.177013	Pitx1	ENSMUST00000055389.7|Xxylt1|ENSMUSG00000047434.7|xyloside xylosyltransferase 1
mm10_v2_chr4_+_129960760_129960808	0.175814	Pitx1	ENSMUST00000139884.1|1700003M07Rik|ENSMUSG00000085389.1|RIKEN cDNA 1700003M07 gene
mm10_v2_chr2_-_121456693_121456781	0.174303	Pitx1	ENSMUST00000110613.2|Serinc4|ENSMUSG00000046110.9|serine incorporator 4 	ENSMUST00000056312.3|Serinc4|ENSMUSG00000046110.9|serine incorporator 4
mm10_v2_chr5_+_66968961_66969132	0.173551	Pitx1	ENSMUST00000132991.1|Limch1|ENSMUSG00000037736.12|LIM and calponin homology domains 1
mm10_v2_chr1_-_165934900_165935036	0.173015	Pitx1	ENSMUST00000069609.5|Pou2f1|ENSMUSG00000026565.12|POU domain, class 2, transcription factor 1 	ENSMUST00000111427.2|Pou2f1|ENSMUSG00000026565.12|POU domain, class 2, transcription factor 1 	ENSMUST00000111426.4|Pou2f1|ENSMUSG00000026565.12|POU domain, class 2, transcription factor 1
mm10_v2_chr9_-_50617228_50617289	0.157566	Pitx1	ENSMUST00000147671.1|AU019823|ENSMUSG00000059820.8|expressed sequence AU019823 	ENSMUST00000145139.1|AU019823|ENSMUSG00000059820.8|expressed sequence AU019823 	ENSMUST00000155435.1|AU019823|ENSMUSG00000059820.8|expressed sequence AU019823
mm10_v2_chr10_-_103029043_103029054	0.148815	Pitx1	ENSMUST00000167156.2|Alx1|ENSMUSG00000036602.7|ALX homeobox 1
mm10_v2_chr1_-_51915968_51916071	0.148596	Pitx1	ENSMUST00000046390.7|Myo1b|ENSMUSG00000018417.8|myosin IB
mm10_v2_chr3_+_105973711_105973809	0.144869	Pitx1	ENSMUST00000000573.2|Ovgp1|ENSMUSG00000074340.3|oviductal glycoprotein 1
mm10_v2_chr7_+_101969796_101969843	0.144803	Pitx1	ENSMUST00000084852.5|Numa1|ENSMUSG00000066306.6|nuclear mitotic apparatus protein 1
mm10_v2_chr9_+_44101722_44101842	0.141913	Pitx1	ENSMUST00000161703.1|Mfrp|ENSMUSG00000034739.11|membrane-type frizzled-related protein 	ENSMUST00000161381.1|Mfrp|ENSMUSG00000034739.11|membrane-type frizzled-related protein 	ENSMUST00000034654.7|Mfrp|ENSMUSG00000034739.11|membrane-type frizzled-related protein
mm10_v2_chr17_-_23586214_23586269	0.140583	Pitx1	ENSMUST00000115516.3|Zfp13|ENSMUSG00000062012.7|zinc finger protein 13
mm10_v2_chrX_+_7728439_7728510	0.140541	Pitx1	ENSMUST00000033489.7|Praf2|ENSMUSG00000031149.7|PRA1 domain family 2
mm10_v2_chr6_-_124840192_124840275	0.140351	Pitx1	ENSMUST00000024206.5|Gnb3|ENSMUSG00000023439.5|guanine nucleotide binding protein (G protein), beta 3
mm10_v2_chr8_+_85060055_85060135	0.140184	Pitx1	ENSMUST00000095220.3|Fbxw9|ENSMUSG00000008167.8|F-box and WD-40 domain protein 9
mm10_v2_chr17_+_7925990_7926006	0.139512	Pitx1	ENSMUST00000036370.7|Tagap|ENSMUSG00000033450.7|T cell activation Rho GTPase activating protein
mm10_v2_chr7_-_98656530_98656600	0.129041	Pitx1	ENSMUST00000038359.4|2210018M11Rik|ENSMUSG00000035401.8|RIKEN cDNA 2210018M11 gene
mm10_v2_chr11_+_98026695_98026744	0.128904	Pitx1	ENSMUST00000092425.4|Rpl19|ENSMUSG00000017404.6|ribosomal protein L19
mm10_v2_chr11_-_69398226_69398243	0.12824	Pitx1	ENSMUST00000050140.5|Tmem88|ENSMUSG00000045377.5|transmembrane protein 88
mm10_v2_chr10_-_9901079_9901250	0.126525	Pitx1	ENSMUST00000141722.1|Stxbp5|ENSMUSG00000019790.10|syntaxin binding protein 5 (tomosyn)
mm10_v2_chr11_+_4186789_4186865	0.124588	Pitx1	ENSMUST00000041042.6|Tbc1d10a|ENSMUSG00000034412.7|TBC1 domain family, member 10a 	ENSMUST00000180088.1|Tbc1d10a|ENSMUSG00000034412.7|TBC1 domain family, member 10a
mm10_v2_chr7_-_134232005_134232054	0.123232	Pitx1	ENSMUST00000134504.1|Adam12|ENSMUSG00000054555.5|a disintegrin and metallopeptidase domain 12 (meltrin alpha)
mm10_v2_chr5_+_8422908_8422988	0.119492	Pitx1	ENSMUST00000170496.1|Slc25a40|ENSMUSG00000054099.5|solute carrier family 25, member 40
mm10_v2_chr15_+_102331700_102331777	0.112778	Pitx1	ENSMUST00000113682.2|Myg1|ENSMUSG00000001285.6|melanocyte proliferating gene 1 	ENSMUST00000001331.6|Myg1|ENSMUSG00000001285.6|melanocyte proliferating gene 1 	ENSMUST00000171244.1|Myg1|ENSMUSG00000001285.6|melanocyte proliferating gene 1
mm10_v2_chrX_+_82948861_82948915	0.10895	Pitx1	ENSMUST00000114000.1|Dmd|ENSMUSG00000045103.11|dystrophin, muscular dystrophy
mm10_v2_chr11_+_19924354_19924375	0.108866	Pitx1	ENSMUST00000093299.6|Spred2|ENSMUSG00000045671.11|sprouty-related, EVH1 domain containing 2
mm10_v2_chr3_+_79884496_79884571	0.10081	Pitx1	ENSMUST00000118853.1|Fam198b|ENSMUSG00000027955.10|family with sequence similarity 198, member B
mm10_v2_chr2_+_121456963_121457127	0.0965918	Pitx1	ENSMUST00000126764.1|Hypk|ENSMUSG00000027245.5|huntingtin interacting protein K
mm10_v2_chr11_-_22982090_22982382	0.091905	Pitx1	ENSMUST00000160826.1|RP23-242C19.7|ENSMUSG00000098650.1|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2 (B3gnt2), transcript variant 2, mRNA 	ENSMUST00000093270.5|Commd1|ENSMUSG00000051355.12|COMM domain containing 1 	ENSMUST00000071068.8|Commd1|ENSMUSG00000051355.12|COMM domain containing 1 	ENSMUST00000159081.1|Commd1|ENSMUSG00000051355.12|COMM domain containing 1
mm10_v2_chr9_-_99876147_99876193	0.0877198	Pitx1	ENSMUST00000054819.8|Sox14|ENSMUSG00000053747.8|SRY-box containing gene 14
mm10_v2_chr10_+_90576872_90576992	0.0833383	Pitx1	ENSMUST00000182550.1|Anks1b|ENSMUSG00000058589.8|ankyrin repeat and sterile alpha motif domain containing 1B 	ENSMUST00000099364.5|Anks1b|ENSMUSG00000058589.8|ankyrin repeat and sterile alpha motif domain containing 1B
mm10_v2_chr12_+_8921598_8921671	0.0727559	Pitx1	ENSMUST00000020909.3|Laptm4a|ENSMUSG00000020585.4|lysosomal-associated protein transmembrane 4A
mm10_v2_chr10_-_117376955_117376978	0.0719567	Pitx1	ENSMUST00000069168.6|Cpsf6|ENSMUSG00000055531.6|cleavage and polyadenylation specific factor 6 	ENSMUST00000176686.1|Cpsf6|ENSMUSG00000055531.6|cleavage and polyadenylation specific factor 6
mm10_v2_chr19_-_6077183_6077229	0.0700305	Pitx1	ENSMUST00000025711.5|Vps51|ENSMUSG00000024797.6|vacuolar protein sorting 51 homolog (S. cerevisiae) 	ENSMUST00000160590.1|Vps51|ENSMUSG00000024797.6|vacuolar protein sorting 51 homolog (S. cerevisiae)
mm10_v2_chr2_+_69670100_69670134	0.0678669	Pitx1	ENSMUST00000100050.3|Klhl41|ENSMUSG00000075307.3|kelch-like 41
mm10_v2_chr11_+_95010277_95010293	0.0627808	Pitx1	ENSMUST00000124735.1|Samd14|ENSMUSG00000047181.6|sterile alpha motif domain containing 14
mm10_v2_chr2_+_102658640_102658669	0.0559076	Pitx1	ENSMUST00000080210.3|Slc1a2|ENSMUSG00000005089.9|solute carrier family 1 (glial high affinity glutamate transporter), member 2
mm10_v2_chr11_-_106920359_106920643	0.0534616	Pitx1	ENSMUST00000167787.1|Smurf2|ENSMUSG00000018363.10|SMAD specific E3 ubiquitin protein ligase 2 	ENSMUST00000092517.2|Smurf2|ENSMUSG00000018363.10|SMAD specific E3 ubiquitin protein ligase 2
mm10_v2_chr10_-_14718191_14718228	0.0515508	Pitx1	ENSMUST00000020016.4|Gje1|ENSMUSG00000019867.4|gap junction protein, epsilon 1
mm10_v2_chr4_-_133968611_133968650	0.0484692	Pitx1	ENSMUST00000102552.1|Hmgn2|ENSMUSG00000003038.9|high mobility group nucleosomal binding domain 2
mm10_v2_chr7_+_120917744_120917815	0.0467303	Pitx1	ENSMUST00000033173.7|Polr3e|ENSMUSG00000030880.7|polymerase (RNA) III (DNA directed) polypeptide E 	ENSMUST00000106483.2|Polr3e|ENSMUSG00000030880.7|polymerase (RNA) III (DNA directed) polypeptide E
mm10_v2_chr9_-_50617428_50617467	0.0460402	Pitx1	ENSMUST00000131351.1|AU019823|ENSMUSG00000059820.8|expressed sequence AU019823 	ENSMUST00000171462.1|AU019823|ENSMUSG00000059820.8|expressed sequence AU019823
mm10_v2_chr19_+_36083696_36083736	0.0454798	Pitx1	ENSMUST00000025714.7|Rpp30|ENSMUSG00000024800.7|ribonuclease P/MRP 30 subunit
mm10_v2_chr3_+_129199960_129199975	0.0439691	Pitx1	ENSMUST00000173645.2|Pitx2|ENSMUSG00000028023.10|paired-like homeodomain transcription factor 2
mm10_v2_chr13_+_94788873_94788951	0.0434954	Pitx1	ENSMUST00000046644.5|Tbca|ENSMUSG00000042043.5|tubulin cofactor A
mm10_v2_chr9_-_108567336_108567359	0.0418292	Pitx1	ENSMUST00000074208.4|Ndufaf3|ENSMUSG00000070283.3|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 3
mm10_v2_chr1_-_44218952_44218961	0.0363113	Pitx1	ENSMUST00000054801.3|Mettl21e|ENSMUSG00000046828.3|methyltransferase like 21E
mm10_v2_chr9_-_100486788_100486788	0.0328403	Pitx1	ENSMUST00000098458.3|Il20rb|ENSMUSG00000044244.12|interleukin 20 receptor beta
mm10_v2_chrX_+_134295225_134295225	0.0309061	Pitx1	ENSMUST00000037687.7|Tmem35|ENSMUSG00000033578.7|transmembrane protein 35
mm10_v2_chr14_+_27039001_27039050	0.0300432	Pitx1	ENSMUST00000035336.3|Il17rd|ENSMUSG00000040717.5|interleukin 17 receptor D
mm10_v2_chr13_+_59585259_59585441	0.0294613	Pitx1	ENSMUST00000168367.1|Naa35|ENSMUSG00000021555.8|N(alpha)-acetyltransferase 35, NatC auxiliary subunit 	ENSMUST00000022038.7|Naa35|ENSMUSG00000021555.8|N(alpha)-acetyltransferase 35, NatC auxiliary subunit 	ENSMUST00000166923.1|Naa35|ENSMUSG00000021555.8|N(alpha)-acetyltransferase 35, NatC auxiliary subunit
mm10_v2_chr8_-_54718664_54718689	0.028137	Pitx1	ENSMUST00000144711.2|Wdr17|ENSMUSG00000039375.10|WD repeat domain 17 	ENSMUST00000093510.2|Wdr17|ENSMUSG00000039375.10|WD repeat domain 17
mm10_v2_chr2_-_64097994_64098023	0.0239395	Pitx1	ENSMUST00000131615.2|Fign|ENSMUSG00000075324.7|fidgetin
mm10_v2_chr17_+_7945653_7945653	0.0215873	Pitx1	ENSMUST00000097423.2|Rsph3a|ENSMUSG00000073471.2|radial spoke 3A homolog (Chlamydomonas)
mm10_v2_chr2_+_121357714_121357907	0.02132	Pitx1	ENSMUST00000125812.1|Ckmt1|ENSMUSG00000000308.8|creatine kinase, mitochondrial 1, ubiquitous 	ENSMUST00000078222.2|Ckmt1|ENSMUSG00000000308.8|creatine kinase, mitochondrial 1, ubiquitous 	ENSMUST00000125221.1|Ckmt1|ENSMUSG00000000308.8|creatine kinase, mitochondrial 1, ubiquitous 	ENSMUST00000150271.1|Ckmt1|ENSMUSG00000000308.8|creatine kinase, mitochondrial 1, ubiquitous
mm10_v2_chr6_-_93913678_93913719	0.0184059	Pitx1	ENSMUST00000093769.5|Magi1|ENSMUSG00000045095.10|membrane associated guanylate kinase, WW and PDZ domain containing 1
mm10_v2_chr5_+_149184678_149184740	0.0179889	Pitx1	ENSMUST00000139474.1|Uspl1|ENSMUSG00000041264.10|ubiquitin specific peptidase like 1 	ENSMUST00000117878.1|Uspl1|ENSMUSG00000041264.10|ubiquitin specific peptidase like 1
mm10_v2_chr5_-_5694559_5694581	0.0179342	Pitx1	ENSMUST00000115426.2|Steap2|ENSMUSG00000015653.7|six transmembrane epithelial antigen of prostate 2
mm10_v2_chr2_+_28506095_28506095	0.0124378	Pitx1	ENSMUST00000074761.4|Gm10134|ENSMUSG00000063611.4|predicted gene 10134
mm10_v2_chr4_-_139833524_139833535	0.011153	Pitx1	ENSMUST00000030508.7|Pax7|ENSMUSG00000028736.7|paired box gene 7
mm10_v2_chr10_+_94198955_94199043	0.00585721	Pitx1	ENSMUST00000020209.9|Ndufa12|ENSMUSG00000020022.10|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12 	ENSMUST00000179990.1|Ndufa12|ENSMUSG00000020022.10|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12
mm10_v2_chr11_+_23256566_23256589	0.00522365	Pitx1	ENSMUST00000136235.1|Xpo1|ENSMUSG00000020290.8|exportin 1, CRM1 homolog (yeast)
mm10_v2_chr6_+_122707489_122707608	0.00490636	Pitx1	ENSMUST00000112581.1|Nanog|ENSMUSG00000012396.6|Nanog homeobox 	ENSMUST00000112580.1|Nanog|ENSMUSG00000012396.6|Nanog homeobox 	ENSMUST00000012540.4|Nanog|ENSMUSG00000012396.6|Nanog homeobox
mm10_v2_chr11_+_29718563_29718753	0.00277747	Pitx1	ENSMUST00000060992.5|Rtn4|ENSMUSG00000020458.10|reticulon 4
