mm10_v2_chr2_-_57124003_57124071	1.97548	Foxg1	ENSMUST00000112629.1|Nr4a2|ENSMUSG00000026826.7|nuclear receptor subfamily 4, group A, member 2
mm10_v2_chr3_-_127225917_127225959	0.957104	Foxg1	ENSMUST00000182064.1|Ank2|ENSMUSG00000032826.10|ankyrin 2, brain 	ENSMUST00000182662.1|Ank2|ENSMUSG00000032826.10|ankyrin 2, brain
mm10_v2_chr15_-_85581809_85581821	0.933055	Foxg1	ENSMUST00000023015.7|Wnt7b|ENSMUSG00000022382.8|wingless-related MMTV integration site 7B
mm10_v2_chr3_-_127225847_127225915	0.888098	Foxg1	ENSMUST00000182726.1|Ank2|ENSMUSG00000032826.10|ankyrin 2, brain 	ENSMUST00000182779.1|Ank2|ENSMUSG00000032826.10|ankyrin 2, brain
mm10_v2_chr4_-_82705735_82705754	0.790864	Foxg1	ENSMUST00000155821.1|Nfib|ENSMUSG00000008575.11|nuclear factor I/B
mm10_v2_chr2_-_154558834_154558897	0.748041	Foxg1	ENSMUST00000109716.2|Necab3|ENSMUSG00000027489.9|N-terminal EF-hand calcium binding protein 3 	ENSMUST00000000895.6|Necab3|ENSMUSG00000027489.9|N-terminal EF-hand calcium binding protein 3 	ENSMUST00000125793.1|Necab3|ENSMUSG00000027489.9|N-terminal EF-hand calcium binding protein 3
mm10_v2_chr18_-_68300194_68300228	0.618171	Foxg1	ENSMUST00000152193.1|Fam210a|ENSMUSG00000038121.6|family with sequence similarity 210, member A
mm10_v2_chr14_-_121698417_121698448	0.553234	Foxg1	ENSMUST00000040700.7|Dock9|ENSMUSG00000025558.9|dedicator of cytokinesis 9
mm10_v2_chr4_+_141793612_141793735	0.402145	Foxg1	ENSMUST00000097805.4|Casp9|ENSMUSG00000028914.7|caspase 9 	ENSMUST00000030747.4|Casp9|ENSMUSG00000028914.7|caspase 9 	ENSMUST00000153094.1|Casp9|ENSMUSG00000028914.7|caspase 9
mm10_v2_chr17_+_80944611_80944644	0.335853	Foxg1	ENSMUST00000025092.4|Tmem178|ENSMUSG00000024245.4|transmembrane protein 178
mm10_v2_chr2_+_4389614_4389639	0.301471	Foxg1	ENSMUST00000115037.2|Frmd4a|ENSMUSG00000026657.10|FERM domain containing 4A
mm10_v2_chr9_+_72925622_72925671	0.287665	Foxg1	ENSMUST00000038489.5|Pygo1|ENSMUSG00000034910.5|pygopus 1
mm10_v2_chr12_-_104751900_104751952	0.277251	Foxg1	ENSMUST00000041987.6|Dicer1|ENSMUSG00000041415.9|dicer 1, ribonuclease type III
mm10_v2_chr9_-_60649793_60649805	0.275028	Foxg1	ENSMUST00000053171.7|Lrrc49|ENSMUSG00000047766.9|leucine rich repeat containing 49
mm10_v2_chr5_-_142906702_142906754	0.268903	Foxg1	ENSMUST00000167721.1|Actb|ENSMUSG00000029580.8|actin, beta 	ENSMUST00000163829.1|Actb|ENSMUSG00000029580.8|actin, beta 	ENSMUST00000100497.4|Actb|ENSMUSG00000029580.8|actin, beta
mm10_v2_chr18_-_68300329_68300336	0.246316	Foxg1	ENSMUST00000042852.6|Fam210a|ENSMUSG00000038121.6|family with sequence similarity 210, member A
mm10_v2_chr14_-_24245913_24245925	0.244753	Foxg1	ENSMUST00000073687.6|Dlg5|ENSMUSG00000021782.8|discs, large homolog 5 (Drosophila) 	ENSMUST00000090398.4|Dlg5|ENSMUSG00000021782.8|discs, large homolog 5 (Drosophila)
mm10_v2_chr15_-_95528228_95528266	0.226472	Foxg1	ENSMUST00000075275.2|Nell2|ENSMUSG00000022454.10|NEL-like 2
mm10_v2_chr18_+_68300351_68300422	0.223579	Foxg1	ENSMUST00000009679.4|Rnmt|ENSMUSG00000009535.7|RNA (guanine-7-) methyltransferase 	ENSMUST00000131075.1|Rnmt|ENSMUSG00000009535.7|RNA (guanine-7-) methyltransferase 	ENSMUST00000025427.7|Rnmt|ENSMUSG00000009535.7|RNA (guanine-7-) methyltransferase 	ENSMUST00000139111.1|Rnmt|ENSMUSG00000009535.7|RNA (guanine-7-) methyltransferase
mm10_v2_chr10_-_120476469_120476527	0.220893	Foxg1	ENSMUST00000072777.7|Hmga2|ENSMUSG00000056758.8|high mobility group AT-hook 2 	ENSMUST00000159699.1|Hmga2|ENSMUSG00000056758.8|high mobility group AT-hook 2
mm10_v2_chr12_-_59011996_59012034	0.21836	Foxg1	ENSMUST00000021375.5|Sec23a|ENSMUSG00000020986.7|SEC23A (S. cerevisiae)
mm10_v2_chr1_+_82839449_82839518	0.216088	Foxg1	ENSMUST00000113444.1|Agfg1|ENSMUSG00000026159.7|ArfGAP with FG repeats 1 	ENSMUST00000063380.4|Agfg1|ENSMUSG00000026159.7|ArfGAP with FG repeats 1
mm10_v2_chr9_+_54586450_54586512	0.200851	Foxg1	ENSMUST00000167866.1|Idh3a|ENSMUSG00000032279.10|isocitrate dehydrogenase 3 (NAD+) alpha
mm10_v2_chr15_-_95528702_95528777	0.190296	Foxg1	ENSMUST00000166170.1|Nell2|ENSMUSG00000022454.10|NEL-like 2
mm10_v2_chr6_-_72345144_72345206	0.177771	Foxg1	ENSMUST00000070345.3|Usp39|ENSMUSG00000056305.3|ubiquitin specific peptidase 39
mm10_v2_chr5_+_34369909_34369970	0.155845	Foxg1	ENSMUST00000180376.1|Fam193a|ENSMUSG00000037210.10|family with sequence similarity 193, member A
mm10_v2_chr6_-_12109583_12109583	0.155724	Foxg1	ENSMUST00000080891.5|Gm6578|ENSMUSG00000057223.5|predicted gene 6578
mm10_v2_chr11_-_120041774_120041790	0.152167	Foxg1	ENSMUST00000103019.1|Aatk|ENSMUSG00000025375.9|apoptosis-associated tyrosine kinase
mm10_v2_chr2_-_152830615_152830680	0.15043	Foxg1	ENSMUST00000146380.1|Bcl2l1|ENSMUSG00000007659.12|BCL2-like 1 	ENSMUST00000134902.1|Bcl2l1|ENSMUSG00000007659.12|BCL2-like 1 	ENSMUST00000134357.1|Bcl2l1|ENSMUSG00000007659.12|BCL2-like 1 	ENSMUST00000109820.3|Bcl2l1|ENSMUSG00000007659.12|BCL2-like 1
mm10_v2_chr12_-_10900296_10900318	0.144478	Foxg1	ENSMUST00000085735.2|Pgk1-rs7|ENSMUSG00000066632.2|phosphoglycerate kinase-1, related sequence-7
mm10_v2_chr11_-_97744659_97744774	0.141897	Foxg1	ENSMUST00000018691.8|Pip4k2b|ENSMUSG00000018547.8|phosphatidylinositol-5-phosphate 4-kinase, type II, beta
mm10_v2_chr4_-_108833544_108833597	0.138644	Foxg1	ENSMUST00000102740.1|Btf3l4|ENSMUSG00000028568.10|basic transcription factor 3-like 4 	ENSMUST00000102741.1|Btf3l4|ENSMUSG00000028568.10|basic transcription factor 3-like 4
mm10_v2_chr16_-_90284300_90284348	0.130386	Foxg1	ENSMUST00000163419.1|Scaf4|ENSMUSG00000022983.9|SR-related CTD-associated factor 4
mm10_v2_chr11_-_28583995_28584105	0.121808	Foxg1	ENSMUST00000146385.2|Ccdc85a|ENSMUSG00000032878.10|coiled-coil domain containing 85A
mm10_v2_chr11_+_72607221_72607307	0.121489	Foxg1	ENSMUST00000021148.6|Ube2g1|ENSMUSG00000020794.7|ubiquitin-conjugating enzyme E2G 1 	ENSMUST00000138247.1|Ube2g1|ENSMUSG00000020794.7|ubiquitin-conjugating enzyme E2G 1
mm10_v2_chr1_-_84284423_84284537	0.119156	Foxg1	ENSMUST00000176720.1|Pid1|ENSMUSG00000045658.10|phosphotyrosine interaction domain containing 1
mm10_v2_chr8_+_46163733_46163750	0.114686	Foxg1	ENSMUST00000110376.1|4933411K20Rik|ENSMUSG00000031631.9|RIKEN cDNA 4933411K20 gene
mm10_v2_chr19_+_11770415_11770440	0.10739	Foxg1	ENSMUST00000167199.1|Mrpl16|ENSMUSG00000024683.5|mitochondrial ribosomal protein L16
mm10_v2_chr5_+_145204523_145204668	0.101738	Foxg1	ENSMUST00000085671.3|Zkscan5|ENSMUSG00000055991.9|zinc finger with KRAB and SCAN domains 5 	ENSMUST00000031601.7|Zkscan5|ENSMUSG00000055991.9|zinc finger with KRAB and SCAN domains 5
mm10_v2_chr5_-_121191365_121191400	0.0962582	Foxg1	ENSMUST00000100770.2|Ptpn11|ENSMUSG00000043733.8|protein tyrosine phosphatase, non-receptor type 11 	ENSMUST00000054547.7|Ptpn11|ENSMUSG00000043733.8|protein tyrosine phosphatase, non-receptor type 11
mm10_v2_chr16_-_90284412_90284498	0.0886742	Foxg1	ENSMUST00000039280.7|Scaf4|ENSMUSG00000022983.9|SR-related CTD-associated factor 4
mm10_v2_chr19_-_4943049_4943127	0.079885	Foxg1	ENSMUST00000133254.1|Peli3|ENSMUSG00000024901.8|pellino 3 	ENSMUST00000120475.1|Peli3|ENSMUSG00000024901.8|pellino 3 	ENSMUST00000025834.7|Peli3|ENSMUSG00000024901.8|pellino 3
mm10_v2_chr7_-_41560795_41560836	0.0739006	Foxg1	ENSMUST00000164677.1|Gm6871|ENSMUSG00000090744.1|predicted gene 6871 	ENSMUST00000073410.5|Gm6871|ENSMUSG00000090744.1|predicted gene 6871
mm10_v2_chr13_-_3918157_3918220	0.0711021	Foxg1	ENSMUST00000091853.4|Net1|ENSMUSG00000021215.8|neuroepithelial cell transforming gene 1
mm10_v2_chr3_-_50443603_50443615	0.0694083	Foxg1	ENSMUST00000029297.4|Slc7a11|ENSMUSG00000027737.5|solute carrier family 7 (cationic amino acid transporter, y+ system), member 11
mm10_v2_chr5_-_106696530_106696650	0.0677528	Foxg1	ENSMUST00000137285.1|Zfp644|ENSMUSG00000049606.10|zinc finger protein 644 	ENSMUST00000124263.1|Zfp644|ENSMUSG00000049606.10|zinc finger protein 644 	ENSMUST00000112695.1|Zfp644|ENSMUSG00000049606.10|zinc finger protein 644 	ENSMUST00000155495.1|Zfp644|ENSMUSG00000049606.10|zinc finger protein 644 	ENSMUST00000135108.1|Zfp644|ENSMUSG00000049606.10|zinc finger protein 644
mm10_v2_chr2_-_164389095_164389095	0.06199	Foxg1	ENSMUST00000167427.1|Slpi|ENSMUSG00000017002.8|secretory leukocyte peptidase inhibitor
mm10_v2_chr2_-_152831112_152831326	0.0416416	Foxg1	ENSMUST00000128172.1|Bcl2l1|ENSMUSG00000007659.12|BCL2-like 1
mm10_v2_chr5_-_134314678_134314760	0.0349709	Foxg1	ENSMUST00000174354.1|Gtf2i|ENSMUSG00000060261.9|general transcription factor II I 	ENSMUST00000174155.1|Gtf2i|ENSMUSG00000060261.9|general transcription factor II I 	ENSMUST00000174513.1|Gtf2i|ENSMUSG00000060261.9|general transcription factor II I 	ENSMUST00000174772.1|Gtf2i|ENSMUSG00000060261.9|general transcription factor II I 	ENSMUST00000173341.1|Gtf2i|ENSMUSG00000060261.9|general transcription factor II I 	ENSMUST00000111261.4|Gtf2i|ENSMUSG00000060261.9|general transcription factor II I 	ENSMUST00000082057.3|Gtf2i|ENSMUSG00000060261.9|general transcription factor II I 	ENSMUST00000059042.7|Gtf2i|ENSMUSG00000060261.9|general transcription factor II I
mm10_v2_chr15_+_103240405_103240432	0.0289192	Foxg1	ENSMUST00000036004.9|Hnrnpa1|ENSMUSG00000046434.9|heterogeneous nuclear ribonucleoprotein A1 	ENSMUST00000087351.7|Hnrnpa1|ENSMUSG00000046434.9|heterogeneous nuclear ribonucleoprotein A1
mm10_v2_chr9_+_106170918_106170953	0.0213194	Foxg1	ENSMUST00000020490.5|Wdr82|ENSMUSG00000020257.6|WD repeat domain containing 82
mm10_v2_chr18_-_34007206_34007361	0.0164346	Foxg1	ENSMUST00000025234.5|Epb4.1l4a|ENSMUSG00000024376.6|erythrocyte protein band 4.1-like 4a
mm10_v2_chr12_-_113000621_113000656	0.00661572	Foxg1	ENSMUST00000011302.7|Brf1|ENSMUSG00000011158.7|BRF1 homolog, subunit of RNA polymerase III transcription initiation factor IIIB (S. cerevisiae)
mm10_v2_chr12_+_112999964_112999964	0.00109574	Foxg1	ENSMUST00000180971.1|9230104M06Rik|ENSMUSG00000097100.1|RIKEN cDNA 9230104M06 gene
