mm10_v2_chr5_-_71095765_71095862	0.768369	Gli2	ENSMUST00000000572.5|Gabra2|ENSMUSG00000000560.5|gamma-aminobutyric acid (GABA) A receptor, subunit alpha 2
mm10_v2_chr1_+_55406163_55406388	0.663087	Gli2	ENSMUST00000042986.8|Plcl1|ENSMUSG00000038349.9|phospholipase C-like 1
mm10_v2_chr12_+_58211772_58211804	0.632544	Gli2	ENSMUST00000110671.2|Sstr1|ENSMUSG00000035431.4|somatostatin receptor 1 	ENSMUST00000044299.2|Sstr1|ENSMUSG00000035431.4|somatostatin receptor 1
mm10_v2_chr17_-_83631892_83631934	0.604043	Gli2	ENSMUST00000051482.1|Kcng3|ENSMUSG00000045053.1|potassium voltage-gated channel, subfamily G, member 3
mm10_v2_chr10_-_114801364_114801364	0.487788	Gli2	ENSMUST00000061632.7|Trhde|ENSMUSG00000050663.7|TRH-degrading enzyme
mm10_v2_chr4_+_36952930_36952970	0.471955	Gli2	ENSMUST00000144029.1|Gm12371|ENSMUSG00000084898.1|predicted gene 12371
mm10_v2_chr8_+_76902277_76902476	0.470582	Gli2	ENSMUST00000109912.1|Nr3c2|ENSMUSG00000031618.7|nuclear receptor subfamily 3, group C, member 2 	ENSMUST00000128862.1|Nr3c2|ENSMUSG00000031618.7|nuclear receptor subfamily 3, group C, member 2 	ENSMUST00000109911.1|Nr3c2|ENSMUSG00000031618.7|nuclear receptor subfamily 3, group C, member 2
mm10_v2_chr18_-_35215008_35215033	0.454104	Gli2	ENSMUST00000091636.3|Lrrtm2|ENSMUSG00000071862.2|leucine rich repeat transmembrane neuronal 2
mm10_v2_chr12_+_38780284_38780349	0.423823	Gli2	ENSMUST00000162563.1|Etv1|ENSMUSG00000004151.10|ets variant gene 1 	ENSMUST00000161164.1|Etv1|ENSMUSG00000004151.10|ets variant gene 1 	ENSMUST00000160996.1|Etv1|ENSMUSG00000004151.10|ets variant gene 1
mm10_v2_chr2_+_69897255_69897303	0.404799	Gli2	ENSMUST00000131553.1|Ubr3|ENSMUSG00000044308.11|ubiquitin protein ligase E3 component n-recognin 3
mm10_v2_chr6_-_137649211_137649294	0.398021	Gli2	ENSMUST00000134630.1|Eps8|ENSMUSG00000015766.8|epidermal growth factor receptor pathway substrate 8 	ENSMUST00000058210.6|Eps8|ENSMUSG00000015766.8|epidermal growth factor receptor pathway substrate 8 	ENSMUST00000111878.1|Eps8|ENSMUSG00000015766.8|epidermal growth factor receptor pathway substrate 8
mm10_v2_chr2_+_121955964_121956001	0.387168	Gli2	ENSMUST00000036647.6|Ctdspl2|ENSMUSG00000033411.10|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2
mm10_v2_chr9_-_95750335_95750368	0.369515	Gli2	ENSMUST00000053785.3|Trpc1|ENSMUSG00000032839.7|transient receptor potential cation channel, subfamily C, member 1
mm10_v2_chr2_-_104712122_104712180	0.35854	Gli2	ENSMUST00000111118.1|Tcp11l1|ENSMUSG00000027175.4|t-complex 11 like 1 	ENSMUST00000028597.3|Tcp11l1|ENSMUSG00000027175.4|t-complex 11 like 1
mm10_v2_chr10_+_76531593_76531635	0.356026	Gli2	ENSMUST00000048678.6|Lss|ENSMUSG00000033105.6|lanosterol synthase
mm10_v2_chr2_+_140395309_140395438	0.348156	Gli2	ENSMUST00000110067.1|Macrod2|ENSMUSG00000068205.8|MACRO domain containing 2 	ENSMUST00000110064.1|Macrod2|ENSMUSG00000068205.8|MACRO domain containing 2 	ENSMUST00000110063.1|Macrod2|ENSMUSG00000068205.8|MACRO domain containing 2 	ENSMUST00000110062.1|Macrod2|ENSMUSG00000068205.8|MACRO domain containing 2 	ENSMUST00000078027.5|Macrod2|ENSMUSG00000068205.8|MACRO domain containing 2 	ENSMUST00000043836.7|Macrod2|ENSMUSG00000068205.8|MACRO domain containing 2
mm10_v2_chr7_-_137314394_137314445	0.34799	Gli2	ENSMUST00000168203.1|Ebf3|ENSMUSG00000010476.7|early B cell factor 3 	ENSMUST00000106118.2|Ebf3|ENSMUSG00000010476.7|early B cell factor 3 	ENSMUST00000169486.2|Ebf3|ENSMUSG00000010476.7|early B cell factor 3 	ENSMUST00000033378.5|Ebf3|ENSMUSG00000010476.7|early B cell factor 3
mm10_v2_chr7_-_116308241_116308376	0.344664	Gli2	ENSMUST00000183057.1|Plekha7|ENSMUSG00000045659.11|pleckstrin homology domain containing, family A member 7 	ENSMUST00000182487.1|Plekha7|ENSMUSG00000045659.11|pleckstrin homology domain containing, family A member 7 	ENSMUST00000181998.1|Plekha7|ENSMUSG00000045659.11|pleckstrin homology domain containing, family A member 7
mm10_v2_chr2_+_121956411_121956480	0.339725	Gli2	ENSMUST00000110578.1|Ctdspl2|ENSMUSG00000033411.10|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2
mm10_v2_chr10_+_83543941_83544007	0.33908	Gli2	ENSMUST00000038388.5|A230046K03Rik|ENSMUSG00000034560.5|RIKEN cDNA A230046K03 gene
mm10_v2_chr16_+_19760902_19761054	0.326052	Gli2	ENSMUST00000119468.1|B3gnt5|ENSMUSG00000022686.8|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5
mm10_v2_chr2_+_69861638_69861686	0.32534	Gli2	ENSMUST00000112260.1|Ssb|ENSMUSG00000068882.7|Sjogren syndrome antigen B
mm10_v2_chr4_-_46536096_46536130	0.321423	Gli2	ENSMUST00000102924.2|Trim14|ENSMUSG00000039853.12|tripartite motif-containing 14
mm10_v2_chr8_+_127064107_127064347	0.310029	Gli2	ENSMUST00000162536.1|Pard3|ENSMUSG00000025812.11|par-3 (partitioning defective 3) homolog (C. elegans) 	ENSMUST00000026921.6|Pard3|ENSMUSG00000025812.11|par-3 (partitioning defective 3) homolog (C. elegans) 	ENSMUST00000162665.1|Pard3|ENSMUSG00000025812.11|par-3 (partitioning defective 3) homolog (C. elegans) 	ENSMUST00000160766.1|Pard3|ENSMUSG00000025812.11|par-3 (partitioning defective 3) homolog (C. elegans) 	ENSMUST00000162602.1|Pard3|ENSMUSG00000025812.11|par-3 (partitioning defective 3) homolog (C. elegans) 	ENSMUST00000162531.1|Pard3|ENSMUSG00000025812.11|par-3 (partitioning defective 3) homolog (C. elegans) 	ENSMUST00000160581.1|Pard3|ENSMUSG00000025812.11|par-3 (partitioning defective 3) homolog (C. elegans) 	ENSMUST00000161355.1|Pard3|ENSMUSG00000025812.11|par-3 (partitioning defective 3) homolog (C. elegans) 	ENSMUST00000159537.1|Pard3|ENSMUSG00000025812.11|par-3 (partitioning defective 3) homolog (C. elegans)
mm10_v2_chr7_+_30650385_30650439	0.306454	Gli2	ENSMUST00000181529.1|Gm26610|ENSMUSG00000097674.1|predicted gene, 26610
mm10_v2_chr8_+_127064022_127064086	0.30296	Gli2	ENSMUST00000160272.1|Pard3|ENSMUSG00000025812.11|par-3 (partitioning defective 3) homolog (C. elegans) 	ENSMUST00000079777.5|Pard3|ENSMUSG00000025812.11|par-3 (partitioning defective 3) homolog (C. elegans) 	ENSMUST00000162907.1|Pard3|ENSMUSG00000025812.11|par-3 (partitioning defective 3) homolog (C. elegans)
mm10_v2_chr11_+_70844745_70844975	0.300687	Gli2	ENSMUST00000076270.6|Rabep1|ENSMUSG00000020817.10|rabaptin, RAB GTPase binding effector protein 1 	ENSMUST00000179114.1|Rabep1|ENSMUSG00000020817.10|rabaptin, RAB GTPase binding effector protein 1 	ENSMUST00000100928.4|Rabep1|ENSMUSG00000020817.10|rabaptin, RAB GTPase binding effector protein 1 	ENSMUST00000177731.1|Rabep1|ENSMUSG00000020817.10|rabaptin, RAB GTPase binding effector protein 1 	ENSMUST00000108533.3|Rabep1|ENSMUSG00000020817.10|rabaptin, RAB GTPase binding effector protein 1 	ENSMUST00000081362.6|Rabep1|ENSMUSG00000020817.10|rabaptin, RAB GTPase binding effector protein 1 	ENSMUST00000178245.1|Rabep1|ENSMUSG00000020817.10|rabaptin, RAB GTPase binding effector protein 1
mm10_v2_chr2_-_120563795_120563878	0.292865	Gli2	ENSMUST00000055241.6|Zfp106|ENSMUSG00000027288.10|zinc finger protein 106 	ENSMUST00000135625.1|Zfp106|ENSMUSG00000027288.10|zinc finger protein 106
mm10_v2_chr17_+_68837062_68837136	0.289992	Gli2	ENSMUST00000178545.1|Tmem200c|ENSMUSG00000095407.1|transmembrane protein 200C
mm10_v2_chr1_-_51915901_51915958	0.28827	Gli2	ENSMUST00000018561.7|Myo1b|ENSMUSG00000018417.8|myosin IB 	ENSMUST00000114537.2|Myo1b|ENSMUSG00000018417.8|myosin IB
mm10_v2_chr5_+_23850590_23850607	0.28389	Gli2	ENSMUST00000181574.1|2700038G22Rik|ENSMUSG00000097180.1|RIKEN cDNA 2700038G22 gene
mm10_v2_chrX_+_137049586_137049654	0.283644	Gli2	ENSMUST00000047852.7|Fam199x|ENSMUSG00000042595.7|family with sequence similarity 199, X-linked
mm10_v2_chr4_-_126968124_126968154	0.282696	Gli2	ENSMUST00000106108.2|Zmym4|ENSMUSG00000042446.10|zinc finger, MYM-type 4
mm10_v2_chr13_+_118714678_118714701	0.28048	Gli2	ENSMUST00000022246.8|Fgf10|ENSMUSG00000021732.8|fibroblast growth factor 10
mm10_v2_chr1_-_51915968_51916071	0.276988	Gli2	ENSMUST00000046390.7|Myo1b|ENSMUSG00000018417.8|myosin IB
mm10_v2_chr2_+_69861562_69861584	0.274137	Gli2	ENSMUST00000090852.4|Ssb|ENSMUSG00000068882.7|Sjogren syndrome antigen B 	ENSMUST00000166411.1|Ssb|ENSMUSG00000068882.7|Sjogren syndrome antigen B
mm10_v2_chr5_+_105519388_105519425	0.248224	Gli2	ENSMUST00000067924.6|Lrrc8c|ENSMUSG00000054720.6|leucine rich repeat containing 8 family, member C 	ENSMUST00000150981.1|Lrrc8c|ENSMUSG00000054720.6|leucine rich repeat containing 8 family, member C
mm10_v2_chr3_+_9250602_9250602	0.247785	Gli2	ENSMUST00000155203.1|Zbtb10|ENSMUSG00000069114.8|zinc finger and BTB domain containing 10
mm10_v2_chr8_+_127063893_127063916	0.243832	Gli2	ENSMUST00000162309.1|Pard3|ENSMUSG00000025812.11|par-3 (partitioning defective 3) homolog (C. elegans)
mm10_v2_chr2_+_180499893_180499976	0.24038	Gli2	ENSMUST00000029084.2|Ntsr1|ENSMUSG00000027568.3|neurotensin receptor 1
mm10_v2_chr4_-_83486178_83486276	0.212529	Gli2	ENSMUST00000130626.1|Psip1|ENSMUSG00000028484.10|PC4 and SFRS1 interacting protein 1
mm10_v2_chr11_+_29526407_29526420	0.205488	Gli2	ENSMUST00000133452.1|Mtif2|ENSMUSG00000020459.8|mitochondrial translational initiation factor 2
mm10_v2_chrX_-_9662950_9663003	0.202803	Gli2	ENSMUST00000033519.2|Dynlt3|ENSMUSG00000031176.2|dynein light chain Tctex-type 3
mm10_v2_chr4_-_121098190_121098250	0.201526	Gli2	ENSMUST00000058754.2|Zmpste24|ENSMUSG00000043207.4|zinc metallopeptidase, STE24
mm10_v2_chr4_+_103619580_103619665	0.195643	Gli2	ENSMUST00000106827.1|Dab1|ENSMUSG00000028519.10|disabled 1
mm10_v2_chr3_+_107036156_107036181	0.192243	Gli2	ENSMUST00000052718.3|Kcna3|ENSMUSG00000047959.3|potassium voltage-gated channel, shaker-related subfamily, member 3
mm10_v2_chr2_+_49451486_49451559	0.179026	Gli2	ENSMUST00000092123.4|Epc2|ENSMUSG00000069495.6|enhancer of polycomb homolog 2 (Drosophila)
mm10_v2_chr18_+_86394952_86394968	0.174753	Gli2	ENSMUST00000058829.2|Neto1|ENSMUSG00000050321.2|neuropilin (NRP) and tolloid (TLL)-like 1
mm10_v2_chr10_-_127263346_127263368	0.173903	Gli2	ENSMUST00000099172.3|Kif5a|ENSMUSG00000074657.4|kinesin family member 5A
mm10_v2_chr5_-_100159261_100159314	0.172176	Gli2	ENSMUST00000139520.1|Tmem150c|ENSMUSG00000050640.10|transmembrane protein 150C
mm10_v2_chr13_+_5861489_5861501	0.171898	Gli2	ENSMUST00000000080.6|Klf6|ENSMUSG00000000078.6|Kruppel-like factor 6
mm10_v2_chr3_+_28781305_28781344	0.171684	Gli2	ENSMUST00000060500.7|Eif5a2|ENSMUSG00000050192.7|eukaryotic translation initiation factor 5A2
mm10_v2_chr11_-_42000284_42000356	0.171094	Gli2	ENSMUST00000109292.2|Gabrg2|ENSMUSG00000020436.11|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2 	ENSMUST00000109290.1|Gabrg2|ENSMUSG00000020436.11|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2
mm10_v2_chr11_-_68871848_68871858	0.163946	Gli2	ENSMUST00000101017.2|Ndel1|ENSMUSG00000018736.8|nuclear distribution gene E-like homolog 1 (A. nidulans)
mm10_v2_chr2_-_37703275_37703290	0.160525	Gli2	ENSMUST00000072186.5|Strbp|ENSMUSG00000026915.10|spermatid perinuclear RNA binding protein
mm10_v2_chr12_-_69357120_69357181	0.157302	Gli2	ENSMUST00000021368.8|Nemf|ENSMUSG00000020982.8|nuclear export mediator factor
mm10_v2_chr4_-_19708922_19709004	0.156729	Gli2	ENSMUST00000108246.2|Wwp1|ENSMUSG00000041058.9|WW domain containing E3 ubiquitin protein ligase 1
mm10_v2_chr10_+_93589413_93589413	0.155062	Gli2	ENSMUST00000181835.1|4933408J17Rik|ENSMUSG00000097407.1|RIKEN cDNA 4933408J17 gene
mm10_v2_chr5_-_148928619_148928659	0.154938	Gli2	ENSMUST00000149169.1|Katnal1|ENSMUSG00000041298.9|katanin p60 subunit A-like 1 	ENSMUST00000047257.8|Katnal1|ENSMUSG00000041298.9|katanin p60 subunit A-like 1
mm10_v2_chr4_-_83486453_83486478	0.152293	Gli2	ENSMUST00000107214.2|Psip1|ENSMUSG00000028484.10|PC4 and SFRS1 interacting protein 1 	ENSMUST00000107215.2|Psip1|ENSMUSG00000028484.10|PC4 and SFRS1 interacting protein 1 	ENSMUST00000030207.8|Psip1|ENSMUSG00000028484.10|PC4 and SFRS1 interacting protein 1
mm10_v2_chr18_+_61555308_61555345	0.152271	Gli2	ENSMUST00000165721.1|Csnk1a1|ENSMUSG00000024576.8|casein kinase 1, alpha 1 	ENSMUST00000115246.2|Csnk1a1|ENSMUSG00000024576.8|casein kinase 1, alpha 1 	ENSMUST00000166990.1|Csnk1a1|ENSMUSG00000024576.8|casein kinase 1, alpha 1 	ENSMUST00000163205.1|Csnk1a1|ENSMUSG00000024576.8|casein kinase 1, alpha 1 	ENSMUST00000170862.1|Csnk1a1|ENSMUSG00000024576.8|casein kinase 1, alpha 1
mm10_v2_chr9_+_100643755_100643770	0.151429	Gli2	ENSMUST00000133388.1|Stag1|ENSMUSG00000037286.9|stromal antigen 1
mm10_v2_chr9_+_100643605_100643626	0.148265	Gli2	ENSMUST00000041418.6|Stag1|ENSMUSG00000037286.9|stromal antigen 1
mm10_v2_chr4_+_33310306_33310387	0.147082	Gli2	ENSMUST00000108153.2|Rngtt|ENSMUSG00000028274.11|RNA guanylyltransferase and 5'-phosphatase 	ENSMUST00000029942.7|Rngtt|ENSMUSG00000028274.11|RNA guanylyltransferase and 5'-phosphatase
mm10_v2_chr13_+_35741313_35741385	0.146138	Gli2	ENSMUST00000163595.2|Cdyl|ENSMUSG00000059288.7|chromodomain protein, Y chromosome-like
mm10_v2_chr18_+_61555689_61555751	0.143764	Gli2	ENSMUST00000167187.1|Csnk1a1|ENSMUSG00000024576.8|casein kinase 1, alpha 1
mm10_v2_chr11_+_29526423_29526474	0.13598	Gli2	ENSMUST00000136351.1|Mtif2|ENSMUSG00000020459.8|mitochondrial translational initiation factor 2 	ENSMUST00000020749.6|Mtif2|ENSMUSG00000020459.8|mitochondrial translational initiation factor 2 	ENSMUST00000144321.1|Mtif2|ENSMUSG00000020459.8|mitochondrial translational initiation factor 2 	ENSMUST00000093239.4|Mtif2|ENSMUSG00000020459.8|mitochondrial translational initiation factor 2
mm10_v2_chr3_+_95427575_95427671	0.135725	Gli2	ENSMUST00000181809.1|Gm4349|ENSMUSG00000097532.1|predicted gene 4349
mm10_v2_chr1_-_38664947_38665000	0.135301	Gli2	ENSMUST00000039827.7|Aff3|ENSMUSG00000037138.10|AF4/FMR2 family, member 3 	ENSMUST00000027250.7|Aff3|ENSMUSG00000037138.10|AF4/FMR2 family, member 3
mm10_v2_chr9_+_100643448_100643542	0.128725	Gli2	ENSMUST00000146312.1|Stag1|ENSMUSG00000037286.9|stromal antigen 1 	ENSMUST00000129269.1|Stag1|ENSMUSG00000037286.9|stromal antigen 1
mm10_v2_chr10_-_17947997_17948098	0.126231	Gli2	ENSMUST00000037879.6|Heca|ENSMUSG00000039879.8|headcase homolog (Drosophila)
mm10_v2_chr5_-_20882072_20882124	0.124843	Gli2	ENSMUST00000118174.1|Phtf2|ENSMUSG00000039987.9|putative homeodomain transcription factor 2
mm10_v2_chr11_-_42000532_42000592	0.123483	Gli2	ENSMUST00000070735.3|Gabrg2|ENSMUSG00000020436.11|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2
mm10_v2_chr15_+_78899755_78899775	0.11765	Gli2	ENSMUST00000001226.3|Sh3bp1|ENSMUSG00000022436.9|SH3-domain binding protein 1 	ENSMUST00000061239.7|Sh3bp1|ENSMUSG00000022436.9|SH3-domain binding protein 1 	ENSMUST00000109698.2|Sh3bp1|ENSMUSG00000022436.9|SH3-domain binding protein 1
mm10_v2_chr11_-_107794557_107794729	0.116725	Gli2	ENSMUST00000021066.3|Cacng4|ENSMUSG00000020723.3|calcium channel, voltage-dependent, gamma subunit 4
mm10_v2_chr9_+_21032038_21032085	0.110063	Gli2	ENSMUST00000019616.4|Icam5|ENSMUSG00000032174.4|intercellular adhesion molecule 5, telencephalin
mm10_v2_chr18_+_61555258_61555290	0.108568	Gli2	ENSMUST00000165123.1|Csnk1a1|ENSMUSG00000024576.8|casein kinase 1, alpha 1
mm10_v2_chr15_-_56694525_56694554	0.106357	Gli2	ENSMUST00000050544.7|Has2|ENSMUSG00000022367.7|hyaluronan synthase 2
mm10_v2_chr7_-_65371210_65371287	0.103368	Gli2	ENSMUST00000102592.3|Tjp1|ENSMUSG00000030516.8|tight junction protein 1
mm10_v2_chrX_-_167382747_167382760	0.102552	Gli2	ENSMUST00000026839.4|Prps2|ENSMUSG00000025742.5|phosphoribosyl pyrophosphate synthetase 2
mm10_v2_chr9_-_44881274_44881323	0.0875781	Gli2	ENSMUST00000002095.3|Kmt2a|ENSMUSG00000002028.6|lysine (K)-specific methyltransferase 2A 	ENSMUST00000114689.1|Kmt2a|ENSMUSG00000002028.6|lysine (K)-specific methyltransferase 2A 	ENSMUST00000128768.1|Kmt2a|ENSMUSG00000002028.6|lysine (K)-specific methyltransferase 2A
mm10_v2_chr2_+_120609383_120609400	0.0868728	Gli2	ENSMUST00000124187.1|Haus2|ENSMUSG00000027285.7|HAUS augmin-like complex, subunit 2
mm10_v2_chr1_+_71652837_71652837	0.0865375	Gli2	ENSMUST00000097699.2|Apol7d|ENSMUSG00000073652.4|apolipoprotein L 7d
mm10_v2_chr2_+_71211706_71211794	0.0829768	Gli2	ENSMUST00000112142.1|Dync1i2|ENSMUSG00000027012.9|dynein cytoplasmic 1 intermediate chain 2 	ENSMUST00000112139.1|Dync1i2|ENSMUSG00000027012.9|dynein cytoplasmic 1 intermediate chain 2 	ENSMUST00000112140.1|Dync1i2|ENSMUSG00000027012.9|dynein cytoplasmic 1 intermediate chain 2 	ENSMUST00000112138.1|Dync1i2|ENSMUSG00000027012.9|dynein cytoplasmic 1 intermediate chain 2
mm10_v2_chr14_+_25607797_25607838	0.082898	Gli2	ENSMUST00000160229.1|Zmiz1|ENSMUSG00000007817.8|zinc finger, MIZ-type containing 1
mm10_v2_chr6_+_67266979_67267021	0.0825487	Gli2	ENSMUST00000042990.4|Serbp1|ENSMUSG00000036371.4|serpine1 mRNA binding protein 1
mm10_v2_chr8_-_27174623_27174651	0.080492	Gli2	ENSMUST00000033878.6|Rab11fip1|ENSMUSG00000031488.7|RAB11 family interacting protein 1 (class I) 	ENSMUST00000054212.6|Rab11fip1|ENSMUSG00000031488.7|RAB11 family interacting protein 1 (class I)
mm10_v2_chr18_-_38250558_38250607	0.08034	Gli2	ENSMUST00000181757.1|1700086O06Rik|ENSMUSG00000097080.1|RIKEN cDNA 1700086O06 gene
mm10_v2_chr3_+_105452326_105452365	0.0801784	Gli2	ENSMUST00000098761.3|Kcnd3|ENSMUSG00000040896.10|potassium voltage-gated channel, Shal-related family, member 3
mm10_v2_chrX_-_95956890_95956918	0.0787943	Gli2	ENSMUST00000079987.6|Las1l|ENSMUSG00000057421.6|LAS1-like (S. cerevisiae) 	ENSMUST00000113864.2|Las1l|ENSMUSG00000057421.6|LAS1-like (S. cerevisiae)
mm10_v2_chr7_-_133123409_133123472	0.0781793	Gli2	ENSMUST00000170459.1|Ctbp2|ENSMUSG00000030970.10|C-terminal binding protein 2 	ENSMUST00000166400.1|Ctbp2|ENSMUSG00000030970.10|C-terminal binding protein 2
mm10_v2_chr6_-_124464772_124464794	0.0775711	Gli2	ENSMUST00000008297.4|Clstn3|ENSMUSG00000008153.5|calsyntenin 3
mm10_v2_chr7_-_133123160_133123185	0.0735626	Gli2	ENSMUST00000166439.1|Ctbp2|ENSMUSG00000030970.10|C-terminal binding protein 2
mm10_v2_chr7_+_12881165_12881204	0.0715193	Gli2	ENSMUST00000144578.1|Zfp128|ENSMUSG00000060397.6|zinc finger protein 128
mm10_v2_chr19_+_27217011_27217042	0.0690223	Gli2	ENSMUST00000164746.1|Vldlr|ENSMUSG00000024924.8|very low density lipoprotein receptor 	ENSMUST00000172302.1|Vldlr|ENSMUSG00000024924.8|very low density lipoprotein receptor
mm10_v2_chr14_-_64949838_64949886	0.0686561	Gli2	ENSMUST00000067843.3|Hmbox1|ENSMUSG00000021972.8|homeobox containing 1 	ENSMUST00000176489.1|Hmbox1|ENSMUSG00000021972.8|homeobox containing 1 	ENSMUST00000175905.1|Hmbox1|ENSMUSG00000021972.8|homeobox containing 1 	ENSMUST00000022544.7|Hmbox1|ENSMUSG00000021972.8|homeobox containing 1 	ENSMUST00000175744.1|Hmbox1|ENSMUSG00000021972.8|homeobox containing 1 	ENSMUST00000176128.1|Hmbox1|ENSMUSG00000021972.8|homeobox containing 1
mm10_v2_chr16_-_88056176_88056176	0.0594021	Gli2	ENSMUST00000072256.5|Grik1|ENSMUSG00000022935.8|glutamate receptor, ionotropic, kainate 1 	ENSMUST00000023652.8|Grik1|ENSMUSG00000022935.8|glutamate receptor, ionotropic, kainate 1 	ENSMUST00000114137.1|Grik1|ENSMUSG00000022935.8|glutamate receptor, ionotropic, kainate 1
mm10_v2_chr10_-_99126321_99126321	0.057459	Gli2	ENSMUST00000060761.5|Phxr2|ENSMUSG00000055108.5|per-hexamer repeat gene 2
mm10_v2_chr4_-_59783800_59783876	0.0531638	Gli2	ENSMUST00000107526.1|Inip|ENSMUSG00000038544.8|INTS3 and NABP interacting protein 	ENSMUST00000095063.4|Inip|ENSMUSG00000038544.8|INTS3 and NABP interacting protein
mm10_v2_chr7_-_133122615_133122762	0.051657	Gli2	ENSMUST00000167218.1|Ctbp2|ENSMUSG00000030970.10|C-terminal binding protein 2
mm10_v2_chr9_+_62342449_62342473	0.048114	Gli2	ENSMUST00000156461.1|Anp32a|ENSMUSG00000032249.8|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A
mm10_v2_chr13_+_44730726_44730838	0.0472187	Gli2	ENSMUST00000173704.1|Jarid2|ENSMUSG00000038518.9|jumonji, AT rich interactive domain 2 	ENSMUST00000044608.7|Jarid2|ENSMUSG00000038518.9|jumonji, AT rich interactive domain 2 	ENSMUST00000173367.1|Jarid2|ENSMUSG00000038518.9|jumonji, AT rich interactive domain 2
mm10_v2_chr11_+_95712673_95712673	0.0468157	Gli2	ENSMUST00000107717.1|Zfp652|ENSMUSG00000075595.3|zinc finger protein 652
mm10_v2_chr6_+_135198034_135198109	0.0438236	Gli2	ENSMUST00000130612.1|8430419L09Rik|ENSMUSG00000030207.9|RIKEN cDNA 8430419L09 gene
mm10_v2_chr7_-_4752972_4753094	0.0414458	Gli2	ENSMUST00000183971.1|Cox6b2|ENSMUSG00000051811.8|cytochrome c oxidase subunit VIb polypeptide 2 	ENSMUST00000182173.1|Cox6b2|ENSMUSG00000051811.8|cytochrome c oxidase subunit VIb polypeptide 2 	ENSMUST00000182738.1|Cox6b2|ENSMUSG00000051811.8|cytochrome c oxidase subunit VIb polypeptide 2 	ENSMUST00000184143.1|Cox6b2|ENSMUSG00000051811.8|cytochrome c oxidase subunit VIb polypeptide 2 	ENSMUST00000182111.1|Cox6b2|ENSMUSG00000051811.8|cytochrome c oxidase subunit VIb polypeptide 2 	ENSMUST00000182048.1|Cox6b2|ENSMUSG00000051811.8|cytochrome c oxidase subunit VIb polypeptide 2 	ENSMUST00000063324.7|Cox6b2|ENSMUSG00000051811.8|cytochrome c oxidase subunit VIb polypeptide 2
mm10_v2_chr11_+_72796164_72796246	0.0401775	Gli2	ENSMUST00000172220.1|Zzef1|ENSMUSG00000055670.7|zinc finger, ZZ-type with EF hand domain 1
mm10_v2_chr11_+_75532127_75532151	0.0369278	Gli2	ENSMUST00000127226.1|Slc43a2|ENSMUSG00000038178.10|solute carrier family 43, member 2
mm10_v2_chr19_+_27217357_27217424	0.036569	Gli2	ENSMUST00000047645.6|Vldlr|ENSMUSG00000024924.8|very low density lipoprotein receptor 	ENSMUST00000167487.1|Vldlr|ENSMUSG00000024924.8|very low density lipoprotein receptor
mm10_v2_chr14_-_55116935_55116980	0.0359422	Gli2	ENSMUST00000022819.5|Jph4|ENSMUSG00000022208.5|junctophilin 4
mm10_v2_chr9_+_114401076_114401133	0.0345644	Gli2	ENSMUST00000063042.9|Glb1|ENSMUSG00000045594.9|galactosidase, beta 1 	ENSMUST00000111820.2|Tmppe|ENSMUSG00000079260.2|transmembrane protein with metallophosphoesterase domain
mm10_v2_chr11_+_72796254_72796268	0.0345537	Gli2	ENSMUST00000069395.5|Zzef1|ENSMUSG00000055670.7|zinc finger, ZZ-type with EF hand domain 1
mm10_v2_chr6_+_135197977_135198023	0.0274337	Gli2	ENSMUST00000111915.1|8430419L09Rik|ENSMUSG00000030207.9|RIKEN cDNA 8430419L09 gene 	ENSMUST00000111916.1|8430419L09Rik|ENSMUSG00000030207.9|RIKEN cDNA 8430419L09 gene
mm10_v2_chr6_+_134920401_134920434	0.0267766	Gli2	ENSMUST00000067327.4|Cdkn1b|ENSMUSG00000003031.8|cyclin-dependent kinase inhibitor 1B 	ENSMUST00000003115.6|Cdkn1b|ENSMUSG00000003031.8|cyclin-dependent kinase inhibitor 1B
mm10_v2_chr2_-_120609500_120609524	0.0256191	Gli2	ENSMUST00000133612.1|Lrrc57|ENSMUSG00000027286.10|leucine rich repeat containing 57 	ENSMUST00000102498.1|Lrrc57|ENSMUSG00000027286.10|leucine rich repeat containing 57 	ENSMUST00000102499.1|Lrrc57|ENSMUSG00000027286.10|leucine rich repeat containing 57
mm10_v2_chr7_+_35119285_35119301	0.0195265	Gli2	ENSMUST00000042985.9|Cebpa|ENSMUSG00000034957.9|CCAAT/enhancer binding protein (C/EBP), alpha
mm10_v2_chr1_+_167001417_167001431	0.0180358	Gli2	ENSMUST00000165874.1|Fam78b|ENSMUSG00000060568.8|family with sequence similarity 78, member B
mm10_v2_chr5_-_137786681_137786715	0.0159797	Gli2	ENSMUST00000132726.1|Mepce|ENSMUSG00000029726.10|methylphosphate capping enzyme
mm10_v2_chr16_-_20302358_20302401	0.0124511	Gli2	ENSMUST00000048642.8|Parl|ENSMUSG00000033918.9|presenilin associated, rhomboid-like
mm10_v2_chr11_-_100619576_100619596	0.0117407	Gli2	ENSMUST00000155152.1|Dnajc7|ENSMUSG00000014195.9|DnaJ (Hsp40) homolog, subfamily C, member 7
mm10_v2_chr7_-_81454751_81454764	0.0113916	Gli2	ENSMUST00000098331.3|Cpeb1|ENSMUSG00000025586.10|cytoplasmic polyadenylation element binding protein 1 	ENSMUST00000178892.1|Cpeb1|ENSMUSG00000025586.10|cytoplasmic polyadenylation element binding protein 1
mm10_v2_chrX_-_141725181_141725263	0.0111234	Gli2	ENSMUST00000067841.7|Irs4|ENSMUSG00000054667.7|insulin receptor substrate 4
mm10_v2_chr16_-_4077778_4077831	0.00965258	Gli2	ENSMUST00000006137.8|Trap1|ENSMUSG00000005981.11|TNF receptor-associated protein 1
mm10_v2_chr5_+_117319258_117319284	0.00892469	Gli2	ENSMUST00000111967.1|Vsig10|ENSMUSG00000066894.8|V-set and immunoglobulin domain containing 10
mm10_v2_chr3_-_95357156_95357211	0.00233198	Gli2	ENSMUST00000107171.3|Setdb1|ENSMUSG00000015697.8|SET domain, bifurcated 1 	ENSMUST00000015841.5|Setdb1|ENSMUSG00000015697.8|SET domain, bifurcated 1 	ENSMUST00000107170.2|Setdb1|ENSMUSG00000015697.8|SET domain, bifurcated 1
mm10_v2_chrX_+_99003224_99003288	0.00127632	Gli2	ENSMUST00000149999.1|Stard8|ENSMUSG00000031216.7|START domain containing 8
