mm10_v2_chr4_+_144892813_144892835	6.16346	Hoxd12	ENSMUST00000105744.1|Dhrs3|ENSMUSG00000066026.8|dehydrogenase/reductase (SDR family) member 3 	ENSMUST00000171001.1|Dhrs3|ENSMUSG00000066026.8|dehydrogenase/reductase (SDR family) member 3
mm10_v2_chr16_+_42907563_42907684	5.86351	Hoxd12	ENSMUST00000151244.1|Zbtb20|ENSMUSG00000022708.10|zinc finger and BTB domain containing 20 	ENSMUST00000114694.2|Zbtb20|ENSMUSG00000022708.10|zinc finger and BTB domain containing 20
mm10_v2_chr4_+_144893127_144893151	5.7971	Hoxd12	ENSMUST00000142808.1|Dhrs3|ENSMUSG00000066026.8|dehydrogenase/reductase (SDR family) member 3
mm10_v2_chr4_-_154636831_154636873	5.49304	Hoxd12	ENSMUST00000030902.6|Prdm16|ENSMUSG00000039410.10|PR domain containing 16 	ENSMUST00000105637.1|Prdm16|ENSMUSG00000039410.10|PR domain containing 16 	ENSMUST00000070313.7|Prdm16|ENSMUSG00000039410.10|PR domain containing 16 	ENSMUST00000105636.1|Prdm16|ENSMUSG00000039410.10|PR domain containing 16 	ENSMUST00000105638.2|Prdm16|ENSMUSG00000039410.10|PR domain containing 16 	ENSMUST00000097759.2|Prdm16|ENSMUSG00000039410.10|PR domain containing 16 	ENSMUST00000124771.1|Prdm16|ENSMUSG00000039410.10|PR domain containing 16
mm10_v2_chr4_+_144893077_144893103	5.06045	Hoxd12	ENSMUST00000154208.1|Dhrs3|ENSMUSG00000066026.8|dehydrogenase/reductase (SDR family) member 3
mm10_v2_chr13_-_84064772_84064808	4.82689	Hoxd12	ENSMUST00000182477.1|Gm17750|ENSMUSG00000098087.1|predicted gene, 17750
mm10_v2_chr2_-_114013619_114013638	4.38261	Hoxd12	ENSMUST00000090275.4|Gjd2|ENSMUSG00000068615.4|gap junction protein, delta 2
mm10_v2_chr6_+_125215551_125215591	3.57501	Hoxd12	ENSMUST00000032487.7|Vamp1|ENSMUSG00000030337.10|vesicle-associated membrane protein 1 	ENSMUST00000100942.2|Vamp1|ENSMUSG00000030337.10|vesicle-associated membrane protein 1 	ENSMUST00000063588.8|Vamp1|ENSMUSG00000030337.10|vesicle-associated membrane protein 1
mm10_v2_chr19_+_53529100_53529109	3.52173	Hoxd12	ENSMUST00000038287.6|Dusp5|ENSMUSG00000034765.6|dual specificity phosphatase 5
mm10_v2_chr2_+_73271925_73271939	3.33369	Hoxd12	ENSMUST00000090813.5|Sp9|ENSMUSG00000068859.5|trans-acting transcription factor 9
mm10_v2_chr5_-_62766153_62766246	3.23537	Hoxd12	ENSMUST00000076623.4|Arap2|ENSMUSG00000037999.9|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2
mm10_v2_chr9_-_77347787_77347815	3.18284	Hoxd12	ENSMUST00000184848.1|Mlip|ENSMUSG00000032355.10|muscular LMNA-interacting protein 	ENSMUST00000184415.1|Mlip|ENSMUSG00000032355.10|muscular LMNA-interacting protein
mm10_v2_chr9_-_77347816_77347887	3.11732	Hoxd12	ENSMUST00000184138.1|Mlip|ENSMUSG00000032355.10|muscular LMNA-interacting protein 	ENSMUST00000184006.1|Mlip|ENSMUSG00000032355.10|muscular LMNA-interacting protein 	ENSMUST00000185144.1|Mlip|ENSMUSG00000032355.10|muscular LMNA-interacting protein 	ENSMUST00000034910.9|Mlip|ENSMUSG00000032355.10|muscular LMNA-interacting protein
mm10_v2_chr13_-_23622502_23622563	3.0945	Hoxd12	ENSMUST00000062045.2|Hist1h1e|ENSMUSG00000051627.2|histone cluster 1, H1e
mm10_v2_chr9_-_77347889_77347916	2.85778	Hoxd12	ENSMUST00000185039.1|Mlip|ENSMUSG00000032355.10|muscular LMNA-interacting protein
mm10_v2_chr18_-_15063560_15063617	2.77204	Hoxd12	ENSMUST00000168989.1|Kctd1|ENSMUSG00000036225.8|potassium channel tetramerisation domain containing 1
mm10_v2_chr15_+_81936753_81936839	2.67718	Hoxd12	ENSMUST00000038757.7|Csdc2|ENSMUSG00000042109.7|cold shock domain containing C2, RNA binding
mm10_v2_chr13_-_97747373_97747384	2.67405	Hoxd12	ENSMUST00000123535.1|5330416C01Rik|ENSMUSG00000054944.7|RIKEN cDNA 5330416C01 gene
mm10_v2_chr15_+_81936911_81936982	2.47548	Hoxd12	ENSMUST00000135663.1|Csdc2|ENSMUSG00000042109.7|cold shock domain containing C2, RNA binding
mm10_v2_chr8_+_69902178_69902194	2.42207	Hoxd12	ENSMUST00000050373.5|Tssk6|ENSMUSG00000047654.5|testis-specific serine kinase 6
mm10_v2_chr17_+_57358682_57358723	2.40828	Hoxd12	ENSMUST00000086763.5|Emr1|ENSMUSG00000004730.8|EGF-like module containing, mucin-like, hormone receptor-like sequence 1 	ENSMUST00000004850.7|Emr1|ENSMUSG00000004730.8|EGF-like module containing, mucin-like, hormone receptor-like sequence 1
mm10_v2_chr3_+_122419772_122419787	2.38126	Hoxd12	ENSMUST00000029766.4|Bcar3|ENSMUSG00000028121.4|breast cancer anti-estrogen resistance 3
mm10_v2_chr1_-_128102412_128102485	2.16266	Hoxd12	ENSMUST00000112538.1|Zranb3|ENSMUSG00000036086.10|zinc finger, RAN-binding domain containing 3 	ENSMUST00000086614.5|Zranb3|ENSMUSG00000036086.10|zinc finger, RAN-binding domain containing 3
mm10_v2_chr13_-_56895737_56895793	2.13932	Hoxd12	ENSMUST00000022023.6|Trpc7|ENSMUSG00000021541.7|transient receptor potential cation channel, subfamily C, member 7 	ENSMUST00000109871.1|Trpc7|ENSMUSG00000021541.7|transient receptor potential cation channel, subfamily C, member 7
mm10_v2_chr10_+_26822560_26822602	2.03177	Hoxd12	ENSMUST00000135866.1|Arhgap18|ENSMUSG00000039031.9|Rho GTPase activating protein 18
mm10_v2_chr15_-_8710734_8710764	1.93235	Hoxd12	ENSMUST00000005493.7|Slc1a3|ENSMUSG00000005360.8|solute carrier family 1 (glial high affinity glutamate transporter), member 3
mm10_v2_chr1_-_56969864_56969875	1.81711	Hoxd12	ENSMUST00000177424.1|Satb2|ENSMUSG00000038331.9|special AT-rich sequence binding protein 2
mm10_v2_chr15_-_8710409_8710498	1.75681	Hoxd12	ENSMUST00000157065.1|Slc1a3|ENSMUSG00000005360.8|solute carrier family 1 (glial high affinity glutamate transporter), member 3
mm10_v2_chr19_+_55741810_55741842	1.73532	Hoxd12	ENSMUST00000111657.3|Tcf7l2|ENSMUSG00000024985.12|transcription factor 7 like 2, T cell specific, HMG box 	ENSMUST00000061496.9|Tcf7l2|ENSMUSG00000024985.12|transcription factor 7 like 2, T cell specific, HMG box 	ENSMUST00000041717.7|Tcf7l2|ENSMUSG00000024985.12|transcription factor 7 like 2, T cell specific, HMG box 	ENSMUST00000111662.4|Tcf7l2|ENSMUSG00000024985.12|transcription factor 7 like 2, T cell specific, HMG box
mm10_v2_chr1_-_152625212_152625220	1.67588	Hoxd12	ENSMUST00000027760.7|Rgl1|ENSMUSG00000026482.7|ral guanine nucleotide dissociation stimulator,-like 1
mm10_v2_chrM_+_3906_3926	1.66541	Hoxd12	ENSMUST00000082396.1|mt-Nd2|ENSMUSG00000064345.1|mitochondrially encoded NADH dehydrogenase 2
mm10_v2_chr3_-_88410295_88410351	1.59883	Hoxd12	ENSMUST00000056370.7|Pmf1|ENSMUSG00000028066.10|polyamine-modulated factor 1
mm10_v2_chrX_+_56779437_56779565	1.5718	Hoxd12	ENSMUST00000114773.3|Fhl1|ENSMUSG00000023092.10|four and a half LIM domains 1
mm10_v2_chrX_+_36195968_36195993	1.55362	Hoxd12	ENSMUST00000115256.1|Zcchc12|ENSMUSG00000036699.6|zinc finger, CCHC domain containing 12
mm10_v2_chr18_-_20002093_20002104	1.51815	Hoxd12	ENSMUST00000115848.3|Dsc3|ENSMUSG00000059898.8|desmocollin 3
mm10_v2_chrX_+_36195950_36195959	1.47156	Hoxd12	ENSMUST00000115257.1|Zcchc12|ENSMUSG00000036699.6|zinc finger, CCHC domain containing 12
mm10_v2_chr17_+_73804841_73804871	1.44711	Hoxd12	ENSMUST00000024860.7|Ehd3|ENSMUSG00000024065.7|EH-domain containing 3
mm10_v2_chrX_+_36195904_36195932	1.44529	Hoxd12	ENSMUST00000115258.2|Zcchc12|ENSMUSG00000036699.6|zinc finger, CCHC domain containing 12
mm10_v2_chrX_+_36195938_36195946	1.438	Hoxd12	ENSMUST00000048067.3|Zcchc12|ENSMUSG00000036699.6|zinc finger, CCHC domain containing 12
mm10_v2_chr1_-_165934900_165935036	1.43076	Hoxd12	ENSMUST00000069609.5|Pou2f1|ENSMUSG00000026565.12|POU domain, class 2, transcription factor 1 	ENSMUST00000111427.2|Pou2f1|ENSMUSG00000026565.12|POU domain, class 2, transcription factor 1 	ENSMUST00000111426.4|Pou2f1|ENSMUSG00000026565.12|POU domain, class 2, transcription factor 1
mm10_v2_chr1_+_19103022_19103043	1.37823	Hoxd12	ENSMUST00000037294.7|Tfap2d|ENSMUSG00000042596.7|transcription factor AP-2, delta
mm10_v2_chr4_-_92191749_92191749	1.36885	Hoxd12	ENSMUST00000123179.1|Gm12666|ENSMUSG00000066107.6|predicted gene 12666
mm10_v2_chr10_-_30655859_30655868	1.35643	Hoxd12	ENSMUST00000092610.4|Ncoa7|ENSMUSG00000039697.9|nuclear receptor coactivator 7
mm10_v2_chr13_-_101692624_101692647	1.3043	Hoxd12	ENSMUST00000035532.6|Pik3r1|ENSMUSG00000041417.9|phosphatidylinositol 3-kinase, regulatory subunit, polypeptide 1 (p85 alpha)
mm10_v2_chr8_-_47352348_47352367	1.28514	Hoxd12	ENSMUST00000110367.2|Stox2|ENSMUSG00000038143.8|storkhead box 2
mm10_v2_chr11_-_109473220_109473294	1.27037	Hoxd12	ENSMUST00000070872.6|Slc16a6|ENSMUSG00000041920.8|solute carrier family 16 (monocarboxylic acid transporters), member 6
mm10_v2_chr9_+_120929216_120929251	1.23931	Hoxd12	ENSMUST00000130466.1|Ctnnb1|ENSMUSG00000006932.10|catenin (cadherin associated protein), beta 1
mm10_v2_chrM_+_7759_7927	1.16798	Hoxd12	ENSMUST00000082407.1|mt-Atp8|ENSMUSG00000064356.3|mitochondrially encoded ATP synthase 8 	ENSMUST00000082408.1|mt-Atp6|ENSMUSG00000064357.1|mitochondrially encoded ATP synthase 6
mm10_v2_chr14_-_66868572_66868688	1.16144	Hoxd12	ENSMUST00000022629.8|Dpysl2|ENSMUSG00000022048.8|dihydropyrimidinase-like 2
mm10_v2_chr6_+_15185203_15185244	1.1477	Hoxd12	ENSMUST00000154448.1|Foxp2|ENSMUSG00000029563.10|forkhead box P2
mm10_v2_chr13_+_80883403_80883422	1.1121	Hoxd12	ENSMUST00000099356.2|Arrdc3|ENSMUSG00000074794.3|arrestin domain containing 3
mm10_v2_chr17_-_91092715_91092822	1.10965	Hoxd12	ENSMUST00000160800.2|Nrxn1|ENSMUSG00000024109.12|neurexin I 	ENSMUST00000159778.1|Nrxn1|ENSMUSG00000024109.12|neurexin I 	ENSMUST00000160844.3|Nrxn1|ENSMUSG00000024109.12|neurexin I
mm10_v2_chr13_-_97747399_97747414	1.09259	Hoxd12	ENSMUST00000144993.1|5330416C01Rik|ENSMUSG00000054944.7|RIKEN cDNA 5330416C01 gene
mm10_v2_chr1_+_159737510_159737510	1.06736	Hoxd12	ENSMUST00000111669.3|Tnr|ENSMUSG00000015829.8|tenascin R
mm10_v2_chr7_-_100583072_100583124	1.05414	Hoxd12	ENSMUST00000152876.1|Mrpl48|ENSMUSG00000030706.10|mitochondrial ribosomal protein L48 	ENSMUST00000150042.1|Mrpl48|ENSMUSG00000030706.10|mitochondrial ribosomal protein L48
mm10_v2_chr1_-_175688353_175688353	1.00594	Hoxd12	ENSMUST00000104984.1|Chml|ENSMUSG00000078185.1|choroideremia-like
mm10_v2_chr3_+_41024369_41024384	0.984547	Hoxd12	ENSMUST00000099121.3|Larp1b|ENSMUSG00000025762.8|La ribonucleoprotein domain family, member 1B
mm10_v2_chr17_-_51826562_51826601	0.90021	Hoxd12	ENSMUST00000024720.4|Satb1|ENSMUSG00000023927.9|special AT-rich sequence binding protein 1 	ENSMUST00000129667.1|Satb1|ENSMUSG00000023927.9|special AT-rich sequence binding protein 1 	ENSMUST00000156051.1|Satb1|ENSMUSG00000023927.9|special AT-rich sequence binding protein 1 	ENSMUST00000169480.1|Satb1|ENSMUSG00000023927.9|special AT-rich sequence binding protein 1 	ENSMUST00000148559.1|Satb1|ENSMUSG00000023927.9|special AT-rich sequence binding protein 1
mm10_v2_chr6_-_119388671_119388739	0.886719	Hoxd12	ENSMUST00000169744.1|Adipor2|ENSMUSG00000030168.7|adiponectin receptor 2
mm10_v2_chr3_+_9403049_9403092	0.885075	Hoxd12	ENSMUST00000180874.1|C030034L19Rik|ENSMUSG00000097365.1|RIKEN cDNA C030034L19 gene 	ENSMUST00000181331.1|C030034L19Rik|ENSMUSG00000097365.1|RIKEN cDNA C030034L19 gene 	ENSMUST00000181930.1|C030034L19Rik|ENSMUSG00000097365.1|RIKEN cDNA C030034L19 gene
mm10_v2_chr7_+_30565410_30565432	0.85602	Hoxd12	ENSMUST00000043850.7|Igflr1|ENSMUSG00000036826.8|IGF-like family receptor 1
mm10_v2_chr2_+_105682463_105682547	0.845494	Hoxd12	ENSMUST00000140173.1|Pax6|ENSMUSG00000027168.15|paired box gene 6 	ENSMUST00000135412.1|Pax6|ENSMUSG00000027168.15|paired box gene 6 	ENSMUST00000138365.1|Pax6|ENSMUSG00000027168.15|paired box gene 6 	ENSMUST00000145744.1|Pax6|ENSMUSG00000027168.15|paired box gene 6
mm10_v2_chr8_+_25720054_25720099	0.838562	Hoxd12	ENSMUST00000068916.8|Ppapdc1b|ENSMUSG00000031570.10|phosphatidic acid phosphatase type 2 domain containing 1B 	ENSMUST00000139836.1|Ppapdc1b|ENSMUSG00000031570.10|phosphatidic acid phosphatase type 2 domain containing 1B
mm10_v2_chr19_+_43752996_43753137	0.783314	Hoxd12	ENSMUST00000026199.7|Cutc|ENSMUSG00000025193.8|cutC copper transporter homolog (E.coli) 	ENSMUST00000112047.3|Cutc|ENSMUSG00000025193.8|cutC copper transporter homolog (E.coli) 	ENSMUST00000153295.1|Cutc|ENSMUSG00000025193.8|cutC copper transporter homolog (E.coli)
mm10_v2_chrX_+_140456613_140456632	0.73779	Hoxd12	ENSMUST00000033809.3|Prps1|ENSMUSG00000031432.3|phosphoribosyl pyrophosphate synthetase 1
mm10_v2_chr1_-_69108039_69108064	0.731653	Hoxd12	ENSMUST00000121473.1|Erbb4|ENSMUSG00000062209.9|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)
mm10_v2_chr1_+_59256906_59256907	0.713136	Hoxd12	ENSMUST00000160662.1|Cdk15|ENSMUSG00000026023.10|cyclin-dependent kinase 15 	ENSMUST00000114248.2|Cdk15|ENSMUSG00000026023.10|cyclin-dependent kinase 15
mm10_v2_chr3_+_66985647_66985678	0.699453	Hoxd12	ENSMUST00000162362.1|Rsrc1|ENSMUSG00000034544.11|arginine/serine-rich coiled-coil 1 	ENSMUST00000065074.7|Rsrc1|ENSMUSG00000034544.11|arginine/serine-rich coiled-coil 1
mm10_v2_chr8_-_69902558_69902558	0.689459	Hoxd12	ENSMUST00000110167.3|Ndufa13|ENSMUSG00000036199.8|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 13
mm10_v2_chr1_+_63176818_63176919	0.685663	Hoxd12	ENSMUST00000129339.1|Eef1b2|ENSMUSG00000025967.10|eukaryotic translation elongation factor 1 beta 2
mm10_v2_chr1_-_163313661_163313710	0.674397	Hoxd12	ENSMUST00000174397.1|Prrx1|ENSMUSG00000026586.10|paired related homeobox 1 	ENSMUST00000075805.6|Prrx1|ENSMUSG00000026586.10|paired related homeobox 1 	ENSMUST00000027878.7|Prrx1|ENSMUSG00000026586.10|paired related homeobox 1
mm10_v2_chr19_-_6987621_6987764	0.663632	Hoxd12	ENSMUST00000130048.1|Vegfb|ENSMUSG00000024962.7|vascular endothelial growth factor B 	ENSMUST00000025914.6|Vegfb|ENSMUSG00000024962.7|vascular endothelial growth factor B
mm10_v2_chr3_-_87768932_87768960	0.647917	Hoxd12	ENSMUST00000173184.1|Pear1|ENSMUSG00000028073.9|platelet endothelial aggregation receptor 1 	ENSMUST00000172621.1|Pear1|ENSMUSG00000028073.9|platelet endothelial aggregation receptor 1 	ENSMUST00000174759.1|Pear1|ENSMUSG00000028073.9|platelet endothelial aggregation receptor 1 	ENSMUST00000172590.1|Pear1|ENSMUSG00000028073.9|platelet endothelial aggregation receptor 1 	ENSMUST00000079083.5|Pear1|ENSMUSG00000028073.9|platelet endothelial aggregation receptor 1
mm10_v2_chr3_+_66985700_66985740	0.64265	Hoxd12	ENSMUST00000046542.6|Rsrc1|ENSMUSG00000034544.11|arginine/serine-rich coiled-coil 1 	ENSMUST00000162693.1|Rsrc1|ENSMUSG00000034544.11|arginine/serine-rich coiled-coil 1
mm10_v2_chr17_-_35897073_35897141	0.623684	Hoxd12	ENSMUST00000150056.1|2310061I04Rik|ENSMUSG00000050705.9|RIKEN cDNA 2310061I04 gene 	ENSMUST00000156817.1|2310061I04Rik|ENSMUSG00000050705.9|RIKEN cDNA 2310061I04 gene 	ENSMUST00000146451.1|2310061I04Rik|ENSMUSG00000050705.9|RIKEN cDNA 2310061I04 gene 	ENSMUST00000148482.1|2310061I04Rik|ENSMUSG00000050705.9|RIKEN cDNA 2310061I04 gene
mm10_v2_chr1_+_74713551_74713574	0.600237	Hoxd12	ENSMUST00000027356.5|Cyp27a1|ENSMUSG00000026170.5|cytochrome P450, family 27, subfamily a, polypeptide 1
mm10_v2_chr7_+_81213567_81213632	0.579071	Hoxd12	ENSMUST00000026672.7|Pde8a|ENSMUSG00000025584.11|phosphodiesterase 8A
mm10_v2_chr13_-_18382041_18382041	0.557477	Hoxd12	ENSMUST00000139064.2|Pou6f2|ENSMUSG00000009734.11|POU domain, class 6, transcription factor 2 	ENSMUST00000175703.2|Pou6f2|ENSMUSG00000009734.11|POU domain, class 6, transcription factor 2
mm10_v2_chr1_-_56969827_56969850	0.533593	Hoxd12	ENSMUST00000176759.1|Satb2|ENSMUSG00000038331.9|special AT-rich sequence binding protein 2
mm10_v2_chr5_+_19907502_19907551	0.510845	Hoxd12	ENSMUST00000101558.3|Magi2|ENSMUSG00000040003.11|membrane associated guanylate kinase, WW and PDZ domain containing 2
mm10_v2_chr5_-_62765618_62765656	0.510293	Hoxd12	ENSMUST00000159470.1|Arap2|ENSMUSG00000037999.9|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2
mm10_v2_chr19_+_60755947_60755987	0.486555	Hoxd12	ENSMUST00000088237.4|Nanos1|ENSMUSG00000072437.3|nanos homolog 1 (Drosophila)
mm10_v2_chr2_-_36104060_36104073	0.47194	Hoxd12	ENSMUST00000112961.3|Lhx6|ENSMUSG00000026890.13|LIM homeobox protein 6 	ENSMUST00000112966.3|Lhx6|ENSMUSG00000026890.13|LIM homeobox protein 6
mm10_v2_chr1_+_153874335_153874354	0.462522	Hoxd12	ENSMUST00000055314.3|Gm5531|ENSMUSG00000043282.3|predicted gene 5531
mm10_v2_chr3_+_66985680_66985692	0.449363	Hoxd12	ENSMUST00000065047.6|Rsrc1|ENSMUSG00000034544.11|arginine/serine-rich coiled-coil 1
mm10_v2_chr12_-_73047179_73047179	0.435823	Hoxd12	ENSMUST00000050029.7|Six1|ENSMUSG00000051367.8|sine oculis-related homeobox 1
mm10_v2_chr13_-_99344652_99344706	0.434627	Hoxd12	ENSMUST00000022153.6|Ptcd2|ENSMUSG00000021650.6|pentatricopeptide repeat domain 2
mm10_v2_chr14_+_66868850_66868850	0.428224	Hoxd12	ENSMUST00000100453.1|Gm5464|ENSMUSG00000075553.1|predicted gene 5464
mm10_v2_chr11_-_109472611_109472688	0.420463	Hoxd12	ENSMUST00000168740.1|Slc16a6|ENSMUSG00000041920.8|solute carrier family 16 (monocarboxylic acid transporters), member 6
mm10_v2_chr1_-_45503282_45503282	0.419632	Hoxd12	ENSMUST00000086430.4|Col5a2|ENSMUSG00000026042.10|collagen, type V, alpha 2
mm10_v2_chr16_+_65520503_65520548	0.410157	Hoxd12	ENSMUST00000176330.1|Pou1f1|ENSMUSG00000004842.12|POU domain, class 1, transcription factor 1 	ENSMUST00000004964.8|Pou1f1|ENSMUSG00000004842.12|POU domain, class 1, transcription factor 1 	ENSMUST00000176038.1|Pou1f1|ENSMUSG00000004842.12|POU domain, class 1, transcription factor 1
mm10_v2_chr14_-_48662740_48662872	0.400565	Hoxd12	ENSMUST00000122009.1|Otx2|ENSMUSG00000021848.9|orthodenticle homolog 2 (Drosophila)
mm10_v2_chr7_-_37772868_37772891	0.400343	Hoxd12	ENSMUST00000176205.1|Zfp536|ENSMUSG00000043456.10|zinc finger protein 536
mm10_v2_chr4_+_31964081_31964263	0.394855	Hoxd12	ENSMUST00000037607.4|Map3k7|ENSMUSG00000028284.7|mitogen-activated protein kinase kinase kinase 7 	ENSMUST00000080933.6|Map3k7|ENSMUSG00000028284.7|mitogen-activated protein kinase kinase kinase 7 	ENSMUST00000108183.1|Map3k7|ENSMUSG00000028284.7|mitogen-activated protein kinase kinase kinase 7 	ENSMUST00000108184.2|Map3k7|ENSMUSG00000028284.7|mitogen-activated protein kinase kinase kinase 7
mm10_v2_chrX_-_75578188_75578247	0.351357	Hoxd12	ENSMUST00000033545.5|Rab39b|ENSMUSG00000031202.5|RAB39B, member RAS oncogene family
mm10_v2_chr10_-_37138863_37138937	0.335568	Hoxd12	ENSMUST00000092584.5|Marcks|ENSMUSG00000069662.5|myristoylated alanine rich protein kinase C substrate
mm10_v2_chr19_-_45812291_45812307	0.323785	Hoxd12	ENSMUST00000086993.4|Kcnip2|ENSMUSG00000025221.9|Kv channel-interacting protein 2
mm10_v2_chr4_+_136284708_136284775	0.321412	Hoxd12	ENSMUST00000130223.1|Zfp46|ENSMUSG00000051351.8|zinc finger protein 46
mm10_v2_chr3_-_154330543_154330576	0.29807	Hoxd12	ENSMUST00000184966.1|Lhx8|ENSMUSG00000096225.2|LIM homeobox protein 8 	ENSMUST00000177846.2|Lhx8|ENSMUSG00000096225.2|LIM homeobox protein 8
mm10_v2_chr3_+_66985947_66985986	0.289793	Hoxd12	ENSMUST00000161726.1|Rsrc1|ENSMUSG00000034544.11|arginine/serine-rich coiled-coil 1 	ENSMUST00000160504.1|Rsrc1|ENSMUSG00000034544.11|arginine/serine-rich coiled-coil 1
mm10_v2_chr4_+_148000722_148000754	0.287181	Hoxd12	ENSMUST00000103230.4|Nppa|ENSMUSG00000041616.9|natriuretic peptide type A
mm10_v2_chr1_-_89933290_89933290	0.281233	Hoxd12	ENSMUST00000036954.7|Gbx2|ENSMUSG00000034486.7|gastrulation brain homeobox 2
mm10_v2_chr9_+_74848437_74848531	0.280979	Hoxd12	ENSMUST00000161862.1|Gm16551|ENSMUSG00000066477.7|predicted gene 16551 	ENSMUST00000160950.1|Gm20649|ENSMUSG00000093662.1|predicted gene 20649 	ENSMUST00000162089.1|Gm16551|ENSMUSG00000066477.7|predicted gene 16551 	ENSMUST00000160017.1|Gm16551|ENSMUSG00000066477.7|predicted gene 16551
mm10_v2_chr4_+_105789869_105789869	0.258772	Hoxd12	ENSMUST00000184254.1|Gm12728|ENSMUSG00000083780.2|predicted gene 12728
mm10_v2_chr4_-_88033328_88033373	0.256995	Hoxd12	ENSMUST00000078090.5|Mllt3|ENSMUSG00000028496.11|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3
mm10_v2_chr1_+_137928100_137928170	0.224853	Hoxd12	ENSMUST00000054333.2|A130050O07Rik|ENSMUSG00000051480.2|RIKEN cDNA A130050O07 gene
mm10_v2_chr17_+_35059035_35059130	0.224157	Hoxd12	ENSMUST00000007255.6|Ddah2|ENSMUSG00000007039.6|dimethylarginine dimethylaminohydrolase 2 	ENSMUST00000174493.1|Ddah2|ENSMUSG00000007039.6|dimethylarginine dimethylaminohydrolase 2
mm10_v2_chr10_+_4611971_4612021	0.221951	Hoxd12	ENSMUST00000105590.1|Esr1|ENSMUSG00000019768.10|estrogen receptor 1 (alpha) 	ENSMUST00000067086.7|Esr1|ENSMUSG00000019768.10|estrogen receptor 1 (alpha)
mm10_v2_chrX_+_56447965_56447965	0.215602	Hoxd12	ENSMUST00000079663.6|Gm2174|ENSMUSG00000058932.6|predicted gene 2174
mm10_v2_chr10_-_13324160_13324242	0.207101	Hoxd12	ENSMUST00000105545.4|Phactr2|ENSMUSG00000062866.9|phosphatase and actin regulator 2
mm10_v2_chr1_-_63176653_63176822	0.179749	Hoxd12	ENSMUST00000027111.8|Ndufs1|ENSMUSG00000025968.10|NADH dehydrogenase (ubiquinone) Fe-S protein 1 	ENSMUST00000168099.2|Ndufs1|ENSMUSG00000025968.10|NADH dehydrogenase (ubiquinone) Fe-S protein 1
mm10_v2_chr18_-_35215008_35215033	0.179582	Hoxd12	ENSMUST00000091636.3|Lrrtm2|ENSMUSG00000071862.2|leucine rich repeat transmembrane neuronal 2
mm10_v2_chr9_-_13245741_13245741	0.177798	Hoxd12	ENSMUST00000110582.2|Jrkl|ENSMUSG00000079083.2|jerky homolog-like (mouse)
mm10_v2_chr1_-_44118757_44118816	0.151451	Hoxd12	ENSMUST00000027213.7|Kdelc1|ENSMUSG00000026047.7|KDEL (Lys-Asp-Glu-Leu) containing 1 	ENSMUST00000065767.2|Kdelc1|ENSMUSG00000026047.7|KDEL (Lys-Asp-Glu-Leu) containing 1
mm10_v2_chr4_-_133968611_133968650	0.148452	Hoxd12	ENSMUST00000102552.1|Hmgn2|ENSMUSG00000003038.9|high mobility group nucleosomal binding domain 2
mm10_v2_chr4_+_136284658_136284686	0.134064	Hoxd12	ENSMUST00000144217.1|Zfp46|ENSMUSG00000051351.8|zinc finger protein 46
mm10_v2_chr5_-_101665195_101665226	0.106273	Hoxd12	ENSMUST00000044125.8|Nkx6-1|ENSMUSG00000035187.8|NK6 homeobox 1
mm10_v2_chr4_+_105790534_105790534	0.0774092	Hoxd12	ENSMUST00000185012.1|Gm12728|ENSMUSG00000083780.2|predicted gene 12728
mm10_v2_chrX_-_72918284_72918396	0.0762058	Hoxd12	ENSMUST00000152200.1|Cetn2|ENSMUSG00000031347.6|centrin 2
mm10_v2_chr1_+_81077204_81077252	0.0622252	Hoxd12	ENSMUST00000123720.1|Nyap2|ENSMUSG00000054976.8|neuronal tyrosine-phophorylated phosphoinositide 3-kinase adaptor 2
mm10_v2_chr16_-_89508313_89508327	0.0413153	Hoxd12	ENSMUST00000056118.2|Krtap7-1|ENSMUSG00000056706.2|keratin associated protein 7-1
mm10_v2_chrM_+_5319_5333	0.0230491	Hoxd12	ENSMUST00000082402.1|mt-Co1|ENSMUSG00000064351.1|mitochondrially encoded cytochrome c oxidase I
mm10_v2_chr2_-_66410064_66410134	0.0182493	Hoxd12	ENSMUST00000112366.1|Scn1a|ENSMUSG00000064329.7|sodium channel, voltage-gated, type I, alpha
