mm10_v2_chr17_+_17402672_17402771	3.15042	Isl2	ENSMUST00000115576.2|Lix1|ENSMUSG00000047786.12|limb expression 1 homolog (chicken)
mm10_v2_chr4_+_102589687_102589843	3.00729	Isl2	ENSMUST00000097949.4|Pde4b|ENSMUSG00000028525.10|phosphodiesterase 4B, cAMP specific 	ENSMUST00000106901.1|Pde4b|ENSMUSG00000028525.10|phosphodiesterase 4B, cAMP specific
mm10_v2_chrX_+_164373363_164373378	2.98392	Isl2	ENSMUST00000033751.7|Figf|ENSMUSG00000031380.10|c-fos induced growth factor
mm10_v2_chr10_-_63927434_63927434	2.87566	Isl2	ENSMUST00000079279.3|Gm10118|ENSMUSG00000062561.3|predicted gene 10118
mm10_v2_chr11_+_103649498_103649521	2.70205	Isl2	ENSMUST00000057870.2|Rprml|ENSMUSG00000046215.2|reprimo-like
mm10_v2_chr13_+_67833235_67833235	2.11197	Isl2	ENSMUST00000060609.7|Gm10037|ENSMUSG00000058246.6|predicted gene 10037
mm10_v2_chr10_-_109764840_109764840	1.87494	Isl2	ENSMUST00000163071.1|Nav3|ENSMUSG00000020181.9|neuron navigator 3
mm10_v2_chr8_+_25911670_25911692	1.7552	Isl2	ENSMUST00000120653.1|Kcnu1|ENSMUSG00000031576.9|potassium channel, subfamily U, member 1 	ENSMUST00000126226.1|Kcnu1|ENSMUSG00000031576.9|potassium channel, subfamily U, member 1
mm10_v2_chr4_+_47386216_47386265	1.72884	Isl2	ENSMUST00000107725.2|Tgfbr1|ENSMUSG00000007613.9|transforming growth factor, beta receptor I
mm10_v2_chr8_-_9976294_9976335	1.71396	Isl2	ENSMUST00000095476.4|Lig4|ENSMUSG00000049717.8|ligase IV, DNA, ATP-dependent
mm10_v2_chr9_-_90255927_90255943	1.66154	Isl2	ENSMUST00000144646.1|Tbc1d2b|ENSMUSG00000037410.7|TBC1 domain family, member 2B
mm10_v2_chr14_-_100149764_100149764	1.64822	Isl2	ENSMUST00000097079.4|Klf12|ENSMUSG00000072294.4|Kruppel-like factor 12
mm10_v2_chr13_+_48513570_48513570	1.5888	Isl2	ENSMUST00000065465.1|A830005F24Rik|ENSMUSG00000053181.1|RIKEN cDNA A830005F24 gene
mm10_v2_chr15_+_25773985_25774042	1.53248	Isl2	ENSMUST00000125667.1|Myo10|ENSMUSG00000022272.11|myosin X
mm10_v2_chr5_-_24902315_24902456	1.52074	Isl2	ENSMUST00000131486.1|Prkag2|ENSMUSG00000028944.8|protein kinase, AMP-activated, gamma 2 non-catalytic subunit
mm10_v2_chr9_+_53771499_53771535	1.47186	Isl2	ENSMUST00000048670.8|Slc35f2|ENSMUSG00000042195.8|solute carrier family 35, member F2
mm10_v2_chr6_+_134640940_134641097	1.46765	Isl2	ENSMUST00000062755.8|Loh12cr1|ENSMUSG00000042992.9|loss of heterozygosity, 12, chromosomal region 1 homolog (human)
mm10_v2_chr1_-_172027269_172027313	1.4215	Isl2	ENSMUST00000027837.6|Vangl2|ENSMUSG00000026556.9|vang-like 2 (van gogh, Drosophila) 	ENSMUST00000111264.1|Vangl2|ENSMUSG00000026556.9|vang-like 2 (van gogh, Drosophila)
mm10_v2_chr8_-_125492710_125492710	1.40103	Isl2	ENSMUST00000108775.1|Sipa1l2|ENSMUSG00000001995.8|signal-induced proliferation-associated 1 like 2
mm10_v2_chr17_+_70561739_70561787	1.37366	Isl2	ENSMUST00000097288.2|Dlgap1|ENSMUSG00000003279.10|discs, large (Drosophila) homolog-associated protein 1
mm10_v2_chrY_-_1245753_1245766	1.3403	Isl2	ENSMUST00000154004.1|Uty|ENSMUSG00000068457.8|ubiquitously transcribed tetratricopeptide repeat gene, Y chromosome
mm10_v2_chr5_+_66968961_66969132	1.23339	Isl2	ENSMUST00000132991.1|Limch1|ENSMUSG00000037736.12|LIM and calponin homology domains 1
mm10_v2_chr16_-_16829276_16829349	1.19361	Isl2	ENSMUST00000023468.5|Spag6|ENSMUSG00000022783.5|sperm associated antigen 6
mm10_v2_chrX_-_60893430_60893440	1.16809	Isl2	ENSMUST00000135107.2|Sox3|ENSMUSG00000045179.8|SRY-box containing gene 3
mm10_v2_chr13_-_58354862_58354862	1.14383	Isl2	ENSMUST00000043605.5|Kif27|ENSMUSG00000060176.3|kinesin family member 27
mm10_v2_chr15_-_37459327_37459380	1.13953	Isl2	ENSMUST00000119730.1|Ncald|ENSMUSG00000051359.8|neurocalcin delta 	ENSMUST00000120746.1|Ncald|ENSMUSG00000051359.8|neurocalcin delta
mm10_v2_chr5_-_88675190_88675242	1.12167	Isl2	ENSMUST00000133532.1|Grsf1|ENSMUSG00000044221.8|G-rich RNA sequence binding factor 1 	ENSMUST00000150438.1|Grsf1|ENSMUSG00000044221.8|G-rich RNA sequence binding factor 1
mm10_v2_chr1_+_12718496_12718545	1.07932	Isl2	ENSMUST00000088585.3|Sulf1|ENSMUSG00000016918.9|sulfatase 1
mm10_v2_chr2_-_45112890_45113010	1.06456	Isl2	ENSMUST00000076836.6|Zeb2|ENSMUSG00000026872.10|zinc finger E-box binding homeobox 2
mm10_v2_chr6_+_125049903_125049947	1.06263	Isl2	ENSMUST00000112413.1|Acrbp|ENSMUSG00000072770.3|proacrosin binding protein
mm10_v2_chr1_+_187215501_187215547	1.04065	Isl2	ENSMUST00000097443.3|Gpatch2|ENSMUSG00000039210.10|G patch domain containing 2 	ENSMUST00000065573.7|Gpatch2|ENSMUSG00000039210.10|G patch domain containing 2 	ENSMUST00000110943.2|Gpatch2|ENSMUSG00000039210.10|G patch domain containing 2 	ENSMUST00000044812.5|Gpatch2|ENSMUSG00000039210.10|G patch domain containing 2
mm10_v2_chr5_+_66968559_66968577	1.01761	Isl2	ENSMUST00000127184.1|Limch1|ENSMUSG00000037736.12|LIM and calponin homology domains 1
mm10_v2_chr1_+_72284367_72284419	1.00538	Isl2	ENSMUST00000027380.5|Tmem169|ENSMUSG00000026188.5|transmembrane protein 169 	ENSMUST00000141783.1|Tmem169|ENSMUSG00000026188.5|transmembrane protein 169
mm10_v2_chr10_+_116143881_116143903	0.986614	Isl2	ENSMUST00000105271.2|Ptprr|ENSMUSG00000020151.10|protein tyrosine phosphatase, receptor type, R
mm10_v2_chr19_+_25406661_25406699	0.951571	Isl2	ENSMUST00000146647.1|Kank1|ENSMUSG00000032702.10|KN motif and ankyrin repeat domains 1
mm10_v2_chr2_+_115581667_115581743	0.939244	Isl2	ENSMUST00000166472.1|BC052040|ENSMUSG00000040282.7|cDNA sequence BC052040 	ENSMUST00000110918.2|BC052040|ENSMUSG00000040282.7|cDNA sequence BC052040
mm10_v2_chr4_-_88722454_88722485	0.880377	Isl2	ENSMUST00000094993.2|Klhl9|ENSMUSG00000070923.4|kelch-like 9
mm10_v2_chr11_-_101278927_101279114	0.850421	Isl2	ENSMUST00000168089.1|Coa3|ENSMUSG00000017188.3|cytochrome C oxidase assembly factor 3 	ENSMUST00000017332.3|Coa3|ENSMUSG00000017188.3|cytochrome C oxidase assembly factor 3
mm10_v2_chr17_+_12119274_12119348	0.811164	Isl2	ENSMUST00000024594.2|Agpat4|ENSMUSG00000023827.2|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)
mm10_v2_chr12_-_10900296_10900318	0.803209	Isl2	ENSMUST00000085735.2|Pgk1-rs7|ENSMUSG00000066632.2|phosphoglycerate kinase-1, related sequence-7
mm10_v2_chr11_+_69838514_69838567	0.799767	Isl2	ENSMUST00000133967.1|Tmem256|ENSMUSG00000070394.4|transmembrane protein 256 	ENSMUST00000094065.4|Tmem256|ENSMUSG00000070394.4|transmembrane protein 256
mm10_v2_chr11_+_58171648_58171688	0.798326	Isl2	ENSMUST00000020820.1|Mrpl22|ENSMUSG00000020514.2|mitochondrial ribosomal protein L22
mm10_v2_chr9_-_15301555_15301607	0.769386	Isl2	ENSMUST00000034414.8|4931406C07Rik|ENSMUSG00000031938.8|RIKEN cDNA 4931406C07 gene
mm10_v2_chr7_+_19119853_19119913	0.769261	Isl2	ENSMUST00000053109.3|Fbxo46|ENSMUSG00000050428.6|F-box protein 46
mm10_v2_chr5_-_118244861_118245116	0.769029	Isl2	ENSMUST00000117177.1|Rnft2|ENSMUSG00000032850.10|ring finger protein, transmembrane 2 	ENSMUST00000133372.1|Rnft2|ENSMUSG00000032850.10|ring finger protein, transmembrane 2 	ENSMUST00000154786.1|Rnft2|ENSMUSG00000032850.10|ring finger protein, transmembrane 2 	ENSMUST00000121369.1|Rnft2|ENSMUSG00000032850.10|ring finger protein, transmembrane 2
mm10_v2_chr9_-_102354685_102354699	0.761246	Isl2	ENSMUST00000035129.7|Ephb1|ENSMUSG00000032537.8|Eph receptor B1 	ENSMUST00000085169.5|Ephb1|ENSMUSG00000032537.8|Eph receptor B1
mm10_v2_chr11_+_5520652_5520659	0.757902	Isl2	ENSMUST00000063084.9|Xbp1|ENSMUSG00000020484.12|X-box binding protein 1
mm10_v2_chr8_+_88118747_88118777	0.757538	Isl2	ENSMUST00000095214.3|Cnep1r1|ENSMUSG00000036810.10|CTD nuclear envelope phosphatase 1 regulatory subunit 1
mm10_v2_chr10_+_94576254_94576270	0.756251	Isl2	ENSMUST00000117929.1|Tmcc3|ENSMUSG00000020023.11|transmembrane and coiled coil domains 3
mm10_v2_chr11_+_94327984_94328029	0.737646	Isl2	ENSMUST00000107818.2|Ankrd40|ENSMUSG00000020864.7|ankyrin repeat domain 40 	ENSMUST00000051221.6|Ankrd40|ENSMUSG00000020864.7|ankyrin repeat domain 40
mm10_v2_chr3_-_51408925_51408988	0.713456	Isl2	ENSMUST00000038108.6|Ndufc1|ENSMUSG00000037152.6|NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 1
mm10_v2_chr10_+_23797052_23797200	0.704651	Isl2	ENSMUST00000133289.1|Slc18b1|ENSMUSG00000037455.10|solute carrier family 18, subfamily B, member 1
mm10_v2_chr8_-_21906412_21906437	0.693669	Isl2	ENSMUST00000051965.4|Defb11|ENSMUSG00000045337.4|defensin beta 11
mm10_v2_chr17_-_53867041_53867041	0.667329	Isl2	ENSMUST00000061311.7|Mrps36-ps1|ENSMUSG00000021631.7|mitichondrial ribosomal protein S36, pseudogene 1
mm10_v2_chr10_-_61784014_61784147	0.653267	Isl2	ENSMUST00000020283.4|H2afy2|ENSMUSG00000020086.6|H2A histone family, member Y2
mm10_v2_chr11_-_80779989_80780033	0.637875	Isl2	ENSMUST00000041065.7|Myo1d|ENSMUSG00000035441.8|myosin ID 	ENSMUST00000070997.5|Myo1d|ENSMUSG00000035441.8|myosin ID
mm10_v2_chr17_+_85028347_85028404	0.603082	Isl2	ENSMUST00000024944.7|Slc3a1|ENSMUSG00000024131.7|solute carrier family 3, member 1
mm10_v2_chr5_-_3647806_3648009	0.602494	Isl2	ENSMUST00000119783.1|Gatad1|ENSMUSG00000007415.9|GATA zinc finger domain containing 1 	ENSMUST00000007559.8|Gatad1|ENSMUSG00000007415.9|GATA zinc finger domain containing 1
mm10_v2_chr14_-_5863663_5863663	0.590315	Isl2	ENSMUST00000178594.1|Gm8237|ENSMUSG00000090707.2|predicted gene 8237
mm10_v2_chr1_-_121332545_121332568	0.589233	Isl2	ENSMUST00000161068.1|Insig2|ENSMUSG00000003721.8|insulin induced gene 2
mm10_v2_chr14_-_104522615_104522707	0.585512	Isl2	ENSMUST00000022716.2|Rnf219|ENSMUSG00000022120.3|ring finger protein 219
mm10_v2_chr9_+_35423582_35423589	0.584761	Isl2	ENSMUST00000154652.1|Cdon|ENSMUSG00000038119.8|cell adhesion molecule-related/down-regulated by oncogenes
mm10_v2_chr10_+_79996479_79996505	0.573833	Isl2	ENSMUST00000132517.1|Abca7|ENSMUSG00000035722.9|ATP-binding cassette, sub-family A (ABC1), member 7
mm10_v2_chr9_-_119341390_119341420	0.522491	Isl2	ENSMUST00000139870.1|Myd88|ENSMUSG00000032508.8|myeloid differentiation primary response gene 88
mm10_v2_chr1_-_156034800_156034817	0.510467	Isl2	ENSMUST00000169241.1|Tor1aip1|ENSMUSG00000026466.10|torsin A interacting protein 1
mm10_v2_chr16_+_11406618_11406675	0.504037	Isl2	ENSMUST00000122168.1|Snx29|ENSMUSG00000071669.8|sorting nexin 29
mm10_v2_chr11_-_17953861_17953897	0.495917	Isl2	ENSMUST00000076661.6|Etaa1|ENSMUSG00000016984.7|Ewing's tumor-associated antigen 1
mm10_v2_chr6_-_89595647_89595658	0.495021	Isl2	ENSMUST00000032172.8|Chchd6|ENSMUSG00000030086.10|coiled-coil-helix-coiled-coil-helix domain containing 6 	ENSMUST00000113550.3|Chchd6|ENSMUSG00000030086.10|coiled-coil-helix-coiled-coil-helix domain containing 6
mm10_v2_chr14_+_4198185_4198185	0.493737	Isl2	ENSMUST00000180184.1|Gm2974|ENSMUSG00000079391.4|predicted gene 2974
mm10_v2_chr14_+_3348089_3348089	0.482105	Isl2	ENSMUST00000178722.1|Gm2956|ENSMUSG00000096574.1|predicted gene 2956
mm10_v2_chr15_-_35938009_35938178	0.480302	Isl2	ENSMUST00000156915.1|Cox6c|ENSMUSG00000014313.8|cytochrome c oxidase subunit VIc
mm10_v2_chr11_-_98018308_98018372	0.465116	Isl2	ENSMUST00000107561.2|Cacnb1|ENSMUSG00000020882.11|calcium channel, voltage-dependent, beta 1 subunit
mm10_v2_chr15_-_10485385_10485422	0.460354	Isl2	ENSMUST00000168690.1|Brix1|ENSMUSG00000022247.6|BRX1, biogenesis of ribosomes, homolog (S. cerevisiae)
mm10_v2_chr9_+_108290433_108290497	0.446607	Isl2	ENSMUST00000035227.6|Nicn1|ENSMUSG00000032606.6|nicolin 1
mm10_v2_chr14_-_6411578_6411578	0.437996	Isl2	ENSMUST00000179312.1|Gm3591|ENSMUSG00000096904.1|predicted gene 3591
mm10_v2_chr8_-_54724317_54724388	0.437533	Isl2	ENSMUST00000129132.2|Wdr17|ENSMUSG00000039375.10|WD repeat domain 17 	ENSMUST00000150488.1|Wdr17|ENSMUSG00000039375.10|WD repeat domain 17 	ENSMUST00000127511.2|Wdr17|ENSMUSG00000039375.10|WD repeat domain 17
mm10_v2_chr15_-_100424092_100424173	0.436234	Isl2	ENSMUST00000154676.1|Slc11a2|ENSMUSG00000023030.10|solute carrier family 11 (proton-coupled divalent metal ion transporters), member 2
mm10_v2_chr2_-_150255591_150255591	0.435586	Isl2	ENSMUST00000063463.5|Gm21994|ENSMUSG00000074735.2|predicted gene 21994
mm10_v2_chr14_-_7473073_7473073	0.430286	Isl2	ENSMUST00000167833.2|Gm3752|ENSMUSG00000091617.2|predicted gene 3752
mm10_v2_chr13_-_67451585_67451638	0.42511	Isl2	ENSMUST00000057241.8|Zfp874a|ENSMUSG00000069206.7|zinc finger protein 874a 	ENSMUST00000075255.5|Zfp874a|ENSMUSG00000069206.7|zinc finger protein 874a
mm10_v2_chr17_-_32822200_32822200	0.422376	Isl2	ENSMUST00000179695.1|Zfp799|ENSMUSG00000095253.1|zinc finger protein 799
mm10_v2_chr1_+_132477361_132477412	0.415126	Isl2	ENSMUST00000027700.8|Rbbp5|ENSMUSG00000026439.8|retinoblastoma binding protein 5
mm10_v2_chr15_-_100424208_100424219	0.415017	Isl2	ENSMUST00000154331.1|Slc11a2|ENSMUSG00000023030.10|solute carrier family 11 (proton-coupled divalent metal ion transporters), member 2
mm10_v2_chr6_-_83121385_83121559	0.409214	Isl2	ENSMUST00000146328.1|Wbp1|ENSMUSG00000030035.8|WW domain binding protein 1 	ENSMUST00000113936.3|Wbp1|ENSMUSG00000030035.8|WW domain binding protein 1 	ENSMUST00000032111.4|Wbp1|ENSMUSG00000030035.8|WW domain binding protein 1
mm10_v2_chr14_+_3667518_3667518	0.406995	Isl2	ENSMUST00000112801.3|Gm3020|ENSMUSG00000079402.3|predicted gene 3020
mm10_v2_chr7_+_100159241_100159315	0.403639	Isl2	ENSMUST00000032967.3|Lipt2|ENSMUSG00000030725.3|lipoyl(octanoyl) transferase 2 (putative)
mm10_v2_chr17_+_56005672_56005712	0.403026	Isl2	ENSMUST00000133998.1|Mpnd|ENSMUSG00000003199.10|MPN domain containing
mm10_v2_chr14_+_3428103_3428103	0.394521	Isl2	ENSMUST00000178060.1|Gm3005|ENSMUSG00000095195.1|predicted gene 3005
mm10_v2_chr4_-_86669492_86669560	0.390996	Isl2	ENSMUST00000149700.1|Plin2|ENSMUSG00000028494.6|perilipin 2
mm10_v2_chr16_-_35939082_35939151	0.387856	Isl2	ENSMUST00000081933.7|Dtx3l|ENSMUSG00000049502.10|deltex 3-like (Drosophila) 	ENSMUST00000114885.1|Dtx3l|ENSMUSG00000049502.10|deltex 3-like (Drosophila)
mm10_v2_chr15_-_35938186_35938246	0.385623	Isl2	ENSMUST00000014457.8|Cox6c|ENSMUSG00000014313.8|cytochrome c oxidase subunit VIc
mm10_v2_chr14_+_5517172_5517172	0.383431	Isl2	ENSMUST00000178220.1|Gm3488|ENSMUSG00000095295.2|predicted gene, 3488
mm10_v2_chr14_+_5164535_5164535	0.383431	Isl2	ENSMUST00000179659.1|Gm3317|ENSMUSG00000095912.1|predicted gene 3317
mm10_v2_chr19_+_8802486_8802530	0.381477	Isl2	ENSMUST00000172175.1|Zbtb3|ENSMUSG00000071661.6|zinc finger and BTB domain containing 3
mm10_v2_chr14_-_6741430_6741430	0.374501	Isl2	ENSMUST00000100904.4|Gm3636|ENSMUSG00000091754.2|predicted gene 3636
mm10_v2_chr8_+_107031218_107031229	0.373378	Isl2	ENSMUST00000034388.9|Vps4a|ENSMUSG00000031913.9|vacuolar protein sorting 4a (yeast)
mm10_v2_chr7_+_126976338_126976400	0.364535	Isl2	ENSMUST00000032920.3|Cdipt|ENSMUSG00000030682.3|CDP-diacylglycerol--inositol 3-phosphatidyltransferase (phosphatidylinositol synthase)
mm10_v2_chr15_-_10485890_10485951	0.354661	Isl2	ENSMUST00000169050.1|Brix1|ENSMUSG00000022247.6|BRX1, biogenesis of ribosomes, homolog (S. cerevisiae) 	ENSMUST00000022855.5|Brix1|ENSMUSG00000022247.6|BRX1, biogenesis of ribosomes, homolog (S. cerevisiae)
mm10_v2_chr14_+_4741737_4741737	0.351961	Isl2	ENSMUST00000178748.1|Gm3252|ENSMUSG00000094628.1|predicted gene 3252
mm10_v2_chr8_+_114133635_114133662	0.337542	Isl2	ENSMUST00000147605.1|Nudt7|ENSMUSG00000031767.7|nudix (nucleoside diphosphate linked moiety X)-type motif 7 	ENSMUST00000134593.1|Nudt7|ENSMUSG00000031767.7|nudix (nucleoside diphosphate linked moiety X)-type motif 7
mm10_v2_chr14_-_31323884_31323929	0.33045	Isl2	ENSMUST00000048603.7|Dnah1|ENSMUSG00000019027.7|dynein, axonemal, heavy chain 1
mm10_v2_chr4_+_22357543_22357618	0.312067	Isl2	ENSMUST00000039234.3|Fbxl4|ENSMUSG00000040410.8|F-box and leucine-rich repeat protein 4
mm10_v2_chrX_+_136245065_136245102	0.310214	Isl2	ENSMUST00000048687.4|Wbp5|ENSMUSG00000042712.4|WW domain binding protein 5
mm10_v2_chr18_+_23753708_23753725	0.309175	Isl2	ENSMUST00000115830.1|Mapre2|ENSMUSG00000024277.8|microtubule-associated protein, RP/EB family, member 2
mm10_v2_chr19_+_5490475_5490487	0.302999	Isl2	ENSMUST00000116560.2|Cfl1|ENSMUSG00000056201.6|cofilin 1, non-muscle
mm10_v2_chr18_-_34651703_34651741	0.300405	Isl2	ENSMUST00000025228.5|Cdc23|ENSMUSG00000024370.10|CDC23 cell division cycle 23 	ENSMUST00000133181.1|Cdc23|ENSMUSG00000024370.10|CDC23 cell division cycle 23
mm10_v2_chr14_-_6874257_6874257	0.29917	Isl2	ENSMUST00000179374.1|Gm3629|ENSMUSG00000093898.1|predicted gene 3629 	ENSMUST00000178298.1|Gm3667|ENSMUSG00000090691.2|predicted gene 3667
mm10_v2_chr19_-_44552831_44552831	0.298482	Isl2	ENSMUST00000166808.1|Gm20538|ENSMUSG00000091471.1|predicted gene 20538
mm10_v2_chr14_+_3825596_3825596	0.296537	Isl2	ENSMUST00000178256.1|Gm3002|ENSMUSG00000096793.1|predicted gene 3002
mm10_v2_chrM_+_8600_8616	0.294455	Isl2	ENSMUST00000082409.1|mt-Co3|ENSMUSG00000064358.1|mitochondrially encoded cytochrome c oxidase III
mm10_v2_chr1_-_9944103_9944127	0.292683	Isl2	ENSMUST00000182498.1|Snhg6|ENSMUSG00000098234.1|small nucleolar RNA host gene (non-protein coding) 6 	ENSMUST00000182742.1|Snhg6|ENSMUSG00000098234.1|small nucleolar RNA host gene (non-protein coding) 6 	ENSMUST00000182580.1|Snhg6|ENSMUSG00000098234.1|small nucleolar RNA host gene (non-protein coding) 6
mm10_v2_chr17_-_26099257_26099259	0.285715	Isl2	ENSMUST00000053575.3|Gm8186|ENSMUSG00000049124.3|predicted gene 8186
mm10_v2_chr14_+_4430992_4430992	0.285197	Isl2	ENSMUST00000164603.1|Gm3173|ENSMUSG00000079386.2|predicted gene 3173 	ENSMUST00000166848.1|Gm3173|ENSMUSG00000079386.2|predicted gene 3173
mm10_v2_chr18_-_36766198_36766237	0.283834	Isl2	ENSMUST00000061522.7|Dnd1|ENSMUSG00000044595.10|dead end homolog 1 (zebrafish)
mm10_v2_chr15_+_16778101_16778101	0.281164	Isl2	ENSMUST00000026432.6|Cdh9|ENSMUSG00000025370.6|cadherin 9
mm10_v2_chr17_+_78916473_78916509	0.273975	Isl2	ENSMUST00000063817.4|1110001A16Rik|ENSMUSG00000062691.4|RIKEN cDNA 1110001A16 gene 	ENSMUST00000180077.1|1110001A16Rik|ENSMUSG00000062691.4|RIKEN cDNA 1110001A16 gene
mm10_v2_chr4_-_14621494_14621506	0.273538	Isl2	ENSMUST00000149633.1|Slc26a7|ENSMUSG00000040569.7|solute carrier family 26, member 7
mm10_v2_chr5_-_87490869_87490875	0.271515	Isl2	ENSMUST00000147854.1|Ugt2a1|ENSMUSG00000029268.8|UDP glucuronosyltransferase 2 family, polypeptide A1
mm10_v2_chr14_+_4871156_4871156	0.270787	Isl2	ENSMUST00000166410.2|Gm3264|ENSMUSG00000094132.1|predicted gene 3264
mm10_v2_chrX_+_73675500_73675516	0.269791	Isl2	ENSMUST00000171398.1|Slc6a8|ENSMUSG00000019558.8|solute carrier family 6 (neurotransmitter transporter, creatine), member 8
mm10_v2_chr4_-_14621669_14621786	0.264548	Isl2	ENSMUST00000143105.1|Slc26a7|ENSMUSG00000040569.7|solute carrier family 26, member 7
mm10_v2_chr6_+_145934113_145934136	0.260612	Isl2	ENSMUST00000032383.7|Sspn|ENSMUSG00000030255.7|sarcospan
mm10_v2_chr9_-_107872403_107872422	0.258664	Isl2	ENSMUST00000183035.1|Rbm6|ENSMUSG00000032582.8|RNA binding motif protein 6
mm10_v2_chr9_-_100506844_100506856	0.257637	Isl2	ENSMUST00000112874.3|Nck1|ENSMUSG00000032475.9|non-catalytic region of tyrosine kinase adaptor protein 1
mm10_v2_chr18_-_43477764_43477836	0.257457	Isl2	ENSMUST00000057110.9|Eif3j2|ENSMUSG00000043424.9|eukaryotic translation initiation factor 3, subunit J2
mm10_v2_chr14_-_6266620_6266620	0.251003	Isl2	ENSMUST00000096172.5|Gm3411|ENSMUSG00000079396.3|predicted gene 3411
mm10_v2_chr9_-_7835255_7835255	0.237697	Isl2	ENSMUST00000074246.6|Birc2|ENSMUSG00000057367.6|baculoviral IAP repeat-containing 2
mm10_v2_chr3_-_20242173_20242187	0.235689	Isl2	ENSMUST00000001921.1|Cpa3|ENSMUSG00000001865.1|carboxypeptidase A3, mast cell
mm10_v2_chr14_+_58893465_58893506	0.233448	Isl2	ENSMUST00000079960.1|Rpl13-ps3|ENSMUSG00000059835.1|ribosomal protein L13, pseudogene 3
mm10_v2_chr6_-_42710036_42710120	0.230106	Isl2	ENSMUST00000045054.4|Fam115a|ENSMUSG00000036667.8|family with sequence similarity 115, member A
mm10_v2_chr2_+_163658370_163658510	0.227774	Isl2	ENSMUST00000164399.1|Pkig|ENSMUSG00000035268.8|protein kinase inhibitor, gamma 	ENSMUST00000064703.6|Pkig|ENSMUSG00000035268.8|protein kinase inhibitor, gamma 	ENSMUST00000099105.2|Pkig|ENSMUSG00000035268.8|protein kinase inhibitor, gamma 	ENSMUST00000152418.1|Pkig|ENSMUSG00000035268.8|protein kinase inhibitor, gamma 	ENSMUST00000126182.1|Pkig|ENSMUSG00000035268.8|protein kinase inhibitor, gamma 	ENSMUST00000131228.1|Pkig|ENSMUSG00000035268.8|protein kinase inhibitor, gamma
mm10_v2_chr14_+_4126066_4126066	0.213271	Isl2	ENSMUST00000167397.2|Gm8108|ENSMUSG00000091563.2|predicted gene 8108
mm10_v2_chr8_+_88118779_88118816	0.203434	Isl2	ENSMUST00000121097.1|Cnep1r1|ENSMUSG00000036810.10|CTD nuclear envelope phosphatase 1 regulatory subunit 1 	ENSMUST00000117775.1|Cnep1r1|ENSMUSG00000036810.10|CTD nuclear envelope phosphatase 1 regulatory subunit 1
mm10_v2_chr10_+_69208546_69208557	0.201451	Isl2	ENSMUST00000164034.1|Rhobtb1|ENSMUSG00000019944.8|Rho-related BTB domain containing 1
mm10_v2_chr10_-_85127977_85128035	0.200256	Isl2	ENSMUST00000050813.2|Mterfd3|ENSMUSG00000049038.2|MTERF domain containing 3
mm10_v2_chr14_-_19569553_19569553	0.185942	Isl2	ENSMUST00000112595.2|Gm2237|ENSMUSG00000093979.1|predicted gene 2237
mm10_v2_chr8_-_61902669_61902713	0.180329	Isl2	ENSMUST00000121785.1|Palld|ENSMUSG00000058056.9|palladin, cytoskeletal associated protein 	ENSMUST00000034057.7|Palld|ENSMUSG00000058056.9|palladin, cytoskeletal associated protein
mm10_v2_chr3_+_89459118_89459214	0.180045	Isl2	ENSMUST00000029564.5|Pmvk|ENSMUSG00000027952.10|phosphomevalonate kinase
mm10_v2_chr4_-_136053343_136053415	0.178973	Isl2	ENSMUST00000102536.4|Rpl11|ENSMUSG00000059291.9|ribosomal protein L11
mm10_v2_chr14_-_62454793_62454793	0.17896	Isl2	ENSMUST00000128573.1|Gucy1b2|ENSMUSG00000021933.5|guanylate cyclase 1, soluble, beta 2
mm10_v2_chr8_+_64947177_64947255	0.170164	Isl2	ENSMUST00000079896.7|Tmem192|ENSMUSG00000025521.8|transmembrane protein 192 	ENSMUST00000026595.5|Tmem192|ENSMUSG00000025521.8|transmembrane protein 192
mm10_v2_chr12_+_87443896_87443946	0.158768	Isl2	ENSMUST00000161023.1|Slirp|ENSMUSG00000021040.9|SRA stem-loop interacting RNA binding protein 	ENSMUST00000160488.1|Slirp|ENSMUSG00000021040.9|SRA stem-loop interacting RNA binding protein 	ENSMUST00000077462.7|Slirp|ENSMUSG00000021040.9|SRA stem-loop interacting RNA binding protein 	ENSMUST00000160880.1|Slirp|ENSMUSG00000021040.9|SRA stem-loop interacting RNA binding protein
mm10_v2_chr1_+_156838915_156838978	0.153863	Isl2	ENSMUST00000111720.1|Angptl1|ENSMUSG00000033544.6|angiopoietin-like 1
mm10_v2_chr1_+_194619815_194619833	0.149656	Isl2	ENSMUST00000027952.5|Plxna2|ENSMUSG00000026640.6|plexin A2
mm10_v2_chr1_-_185329331_185329401	0.149002	Isl2	ENSMUST00000027921.4|Iars2|ENSMUSG00000026618.5|isoleucine-tRNA synthetase 2, mitochondrial 	ENSMUST00000110975.1|Iars2|ENSMUSG00000026618.5|isoleucine-tRNA synthetase 2, mitochondrial 	ENSMUST00000110974.3|Iars2|ENSMUSG00000026618.5|isoleucine-tRNA synthetase 2, mitochondrial
mm10_v2_chr3_-_67515487_67515523	0.14047	Isl2	ENSMUST00000178314.1|Rarres1|ENSMUSG00000049404.5|retinoic acid receptor responder (tazarotene induced) 1 	ENSMUST00000054825.4|Rarres1|ENSMUSG00000049404.5|retinoic acid receptor responder (tazarotene induced) 1
mm10_v2_chrX_-_20931520_20931555	0.138079	Isl2	ENSMUST00000001156.7|Cfp|ENSMUSG00000001128.7|complement factor properdin
mm10_v2_chr14_+_4665094_4665094	0.136843	Isl2	ENSMUST00000169675.2|Gm3239|ENSMUSG00000090872.2|predicted gene 3239
mm10_v2_chr1_+_110099295_110099295	0.136826	Isl2	ENSMUST00000134301.1|Cdh7|ENSMUSG00000026312.11|cadherin 7, type 2
mm10_v2_chr1_-_139377094_139377110	0.131767	Isl2	ENSMUST00000131586.1|Crb1|ENSMUSG00000063681.8|crumbs homolog 1 (Drosophila) 	ENSMUST00000145244.1|Crb1|ENSMUSG00000063681.8|crumbs homolog 1 (Drosophila)
mm10_v2_chr12_-_84617326_84617466	0.130657	Isl2	ENSMUST00000021666.4|Abcd4|ENSMUSG00000021240.5|ATP-binding cassette, sub-family D (ALD), member 4
mm10_v2_chr15_+_84232030_84232043	0.12512	Isl2	ENSMUST00000023072.6|Parvb|ENSMUSG00000022438.6|parvin, beta
mm10_v2_chr2_-_73580288_73580353	0.11715	Isl2	ENSMUST00000028515.3|Chrna1|ENSMUSG00000027107.3|cholinergic receptor, nicotinic, alpha polypeptide 1 (muscle)
mm10_v2_chr15_+_10486008_10486080	0.110959	Isl2	ENSMUST00000022856.8|Rad1|ENSMUSG00000022248.8|RAD1 homolog (S. pombe) 	ENSMUST00000100775.3|Rad1|ENSMUSG00000022248.8|RAD1 homolog (S. pombe) 	ENSMUST00000169519.1|Rad1|ENSMUSG00000022248.8|RAD1 homolog (S. pombe)
mm10_v2_chr10_-_77166545_77166556	0.108768	Isl2	ENSMUST00000081654.6|Col18a1|ENSMUSG00000001435.8|collagen, type XVIII, alpha 1
mm10_v2_chr1_+_190928492_190928550	0.108293	Isl2	ENSMUST00000066632.7|Angel2|ENSMUSG00000026634.10|angel homolog 2 (Drosophila) 	ENSMUST00000110899.1|Angel2|ENSMUSG00000026634.10|angel homolog 2 (Drosophila)
mm10_v2_chrX_+_96455359_96455411	0.0976614	Isl2	ENSMUST00000033553.7|Heph|ENSMUSG00000031209.8|hephaestin
mm10_v2_chr8_+_114133557_114133597	0.0968149	Isl2	ENSMUST00000073521.5|Nudt7|ENSMUSG00000031767.7|nudix (nucleoside diphosphate linked moiety X)-type motif 7 	ENSMUST00000066514.6|Nudt7|ENSMUSG00000031767.7|nudix (nucleoside diphosphate linked moiety X)-type motif 7
mm10_v2_chr3_-_67463828_67463943	0.0867199	Isl2	ENSMUST00000058981.2|Lxn|ENSMUSG00000047557.2|latexin
mm10_v2_chr2_+_69897220_69897247	0.0858093	Isl2	ENSMUST00000055758.9|Ubr3|ENSMUSG00000044308.11|ubiquitin protein ligase E3 component n-recognin 3 	ENSMUST00000112251.2|Ubr3|ENSMUSG00000044308.11|ubiquitin protein ligase E3 component n-recognin 3
mm10_v2_chr6_-_108185552_108185587	0.0850558	Isl2	ENSMUST00000167338.1|Sumf1|ENSMUSG00000030101.9|sulfatase modifying factor 1 	ENSMUST00000172188.1|Sumf1|ENSMUSG00000030101.9|sulfatase modifying factor 1 	ENSMUST00000032191.9|Sumf1|ENSMUSG00000030101.9|sulfatase modifying factor 1
mm10_v2_chr8_+_93810832_93810843	0.0839281	Isl2	ENSMUST00000034198.8|Gnao1|ENSMUSG00000031748.9|guanine nucleotide binding protein, alpha O 	ENSMUST00000125716.1|Gnao1|ENSMUSG00000031748.9|guanine nucleotide binding protein, alpha O
mm10_v2_chr5_+_30105161_30105219	0.0835852	Isl2	ENSMUST00000058045.4|Gareml|ENSMUSG00000044576.6|GRB2 associated, regulator of MAPK1-like
mm10_v2_chr5_-_104828957_104828957	0.0752889	Isl2	ENSMUST00000089906.6|Zfp951|ENSMUSG00000072774.4|zinc finger protein 951
mm10_v2_chr3_-_62605140_62605140	0.0734075	Isl2	ENSMUST00000058535.5|Gpr149|ENSMUSG00000043441.5|G protein-coupled receptor 149
mm10_v2_chr6_+_8209216_8209263	0.0630295	Isl2	ENSMUST00000040017.7|Mios|ENSMUSG00000042447.7|missing oocyte, meiosis regulator, homolog (Drosophila)
mm10_v2_chr10_-_80918212_80918256	0.0624509	Isl2	ENSMUST00000057623.7|Lmnb2|ENSMUSG00000062075.7|lamin B2 	ENSMUST00000179022.1|Lmnb2|ENSMUSG00000062075.7|lamin B2
mm10_v2_chr9_-_22117123_22117174	0.0622946	Isl2	ENSMUST00000013966.6|Elof1|ENSMUSG00000013822.6|elongation factor 1 homolog (ELF1, S. cerevisiae)
mm10_v2_chr3_-_62506970_62507027	0.0574298	Isl2	ENSMUST00000029336.4|Dhx36|ENSMUSG00000027770.4|DEAH (Asp-Glu-Ala-His) box polypeptide 36
mm10_v2_chr11_-_71004387_71004501	0.0554159	Isl2	ENSMUST00000124464.1|Dhx33|ENSMUSG00000040620.9|DEAH (Asp-Glu-Ala-His) box polypeptide 33 	ENSMUST00000108527.1|Dhx33|ENSMUSG00000040620.9|DEAH (Asp-Glu-Ala-His) box polypeptide 33
mm10_v2_chr17_+_20570362_20570362	0.0509053	Isl2	ENSMUST00000095633.3|Gm5145|ENSMUSG00000071273.3|predicted pseudogene 5145
mm10_v2_chr17_+_56613392_56613425	0.0468899	Isl2	ENSMUST00000080492.5|Rpl36|ENSMUSG00000057863.5|ribosomal protein L36
mm10_v2_chr1_-_165634451_165634576	0.0359273	Isl2	ENSMUST00000111435.2|Mpzl1|ENSMUSG00000026566.9|myelin protein zero-like 1 	ENSMUST00000068705.7|Mpzl1|ENSMUSG00000026566.9|myelin protein zero-like 1
mm10_v2_chr17_-_56005566_56005597	0.0356074	Isl2	ENSMUST00000043785.6|Stap2|ENSMUSG00000038781.6|signal transducing adaptor family member 2
mm10_v2_chr11_-_98729374_98729435	0.0340111	Isl2	ENSMUST00000126565.1|Med24|ENSMUSG00000017210.8|mediator complex subunit 24 	ENSMUST00000100500.2|Med24|ENSMUSG00000017210.8|mediator complex subunit 24 	ENSMUST00000017354.6|Med24|ENSMUSG00000017210.8|mediator complex subunit 24
mm10_v2_chr10_+_88379217_88379299	0.0178527	Isl2	ENSMUST00000130301.1|Gnptab|ENSMUSG00000035311.10|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits 	ENSMUST00000020251.8|Gnptab|ENSMUSG00000035311.10|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits
mm10_v2_chr4_+_101986626_101986626	0.017041	Isl2	ENSMUST00000106914.1|Gm12789|ENSMUSG00000078625.4|predicted gene 12789
mm10_v2_chr1_+_45981548_45981548	0.0158798	Isl2	ENSMUST00000085632.2|Rpl23a-ps1|ENSMUSG00000070896.1|ribosomal protein 23A, pseudogene 1
mm10_v2_chr4_-_101981049_101981049	0.0146363	Isl2	ENSMUST00000106916.1|Gm12790|ENSMUSG00000078626.2|predicted gene 12790
mm10_v2_chr15_-_38078842_38078860	0.0134839	Isl2	ENSMUST00000110336.2|Ubr5|ENSMUSG00000037487.6|ubiquitin protein ligase E3 component n-recognin 5
mm10_v2_chr12_+_10390756_10390836	0.0121835	Isl2	ENSMUST00000020947.5|Rdh14|ENSMUSG00000020621.5|retinol dehydrogenase 14 (all-trans and 9-cis)
mm10_v2_chr10_+_102158858_102158889	0.0106591	Isl2	ENSMUST00000138522.1|Mgat4c|ENSMUSG00000019888.9|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative) 	ENSMUST00000163753.1|Mgat4c|ENSMUSG00000019888.9|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative) 	ENSMUST00000138016.1|Mgat4c|ENSMUSG00000019888.9|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative)
mm10_v2_chr6_-_136941887_136941911	0.0103894	Isl2	ENSMUST00000111891.1|Arhgdib|ENSMUSG00000030220.7|Rho, GDP dissociation inhibitor (GDI) beta
mm10_v2_chr2_+_131491764_131491943	0.00801306	Isl2	ENSMUST00000028806.5|Smox|ENSMUSG00000027333.12|spermine oxidase 	ENSMUST00000110179.2|Smox|ENSMUSG00000027333.12|spermine oxidase 	ENSMUST00000110189.2|Smox|ENSMUSG00000027333.12|spermine oxidase 	ENSMUST00000110182.2|Smox|ENSMUSG00000027333.12|spermine oxidase 	ENSMUST00000110183.2|Smox|ENSMUSG00000027333.12|spermine oxidase 	ENSMUST00000110186.2|Smox|ENSMUSG00000027333.12|spermine oxidase 	ENSMUST00000110188.1|Smox|ENSMUSG00000027333.12|spermine oxidase
mm10_v2_chr3_+_83055516_83055565	0.00263102	Isl2	ENSMUST00000150268.1|Plrg1|ENSMUSG00000027998.5|pleiotropic regulator 1, PRL1 homolog (Arabidopsis) 	ENSMUST00000122128.1|Plrg1|ENSMUSG00000027998.5|pleiotropic regulator 1, PRL1 homolog (Arabidopsis)
