mm10_v2_chr9_-_124493793_124493793	1.96212	Nkx3-1	ENSMUST00000178787.1|Gm21836|ENSMUSG00000096734.1|predicted gene, 21836
mm10_v2_chr1_+_99772765_99772765	1.59717	Nkx3-1	ENSMUST00000086738.3|Cntnap5b|ENSMUSG00000067028.5|contactin associated protein-like 5B
mm10_v2_chr4_-_15149755_15149794	1.41553	Nkx3-1	ENSMUST00000108273.1|Necab1|ENSMUSG00000040536.9|N-terminal EF-hand calcium binding protein 1
mm10_v2_chr6_+_58833689_58833734	1.34838	Nkx3-1	ENSMUST00000041401.8|Herc3|ENSMUSG00000029804.10|hect domain and RLD 3
mm10_v2_chr6_-_99632376_99632376	1.3482	Nkx3-1	ENSMUST00000176255.1|Gm20696|ENSMUSG00000030068.3|predicted gene 20696
mm10_v2_chr8_+_36457548_36457574	1.15187	Nkx3-1	ENSMUST00000135373.1|6430573F11Rik|ENSMUSG00000039620.10|RIKEN cDNA 6430573F11 gene 	ENSMUST00000147525.1|6430573F11Rik|ENSMUSG00000039620.10|RIKEN cDNA 6430573F11 gene
mm10_v2_chr2_+_23069210_23069327	0.97974	Nkx3-1	ENSMUST00000155602.1|Acbd5|ENSMUSG00000026781.9|acyl-Coenzyme A binding domain containing 5
mm10_v2_chr5_+_21424934_21425013	0.911212	Nkx3-1	ENSMUST00000056045.4|Fam185a|ENSMUSG00000047221.5|family with sequence similarity 185, member A
mm10_v2_chr13_+_109632760_109632790	0.897062	Nkx3-1	ENSMUST00000135275.1|Pde4d|ENSMUSG00000021699.11|phosphodiesterase 4D, cAMP specific
mm10_v2_chr5_+_37185897_37185897	0.855276	Nkx3-1	ENSMUST00000094840.3|Gm1043|ENSMUSG00000070823.3|predicted gene 1043
mm10_v2_chrX_-_75875101_75875182	0.788075	Nkx3-1	ENSMUST00000114059.3|Pls3|ENSMUSG00000016382.9|plastin 3 (T-isoform)
mm10_v2_chrX_-_75874536_75874590	0.770628	Nkx3-1	ENSMUST00000033547.7|Pls3|ENSMUSG00000016382.9|plastin 3 (T-isoform)
mm10_v2_chr1_+_161142661_161142701	0.753918	Nkx3-1	ENSMUST00000125018.1|Ankrd45|ENSMUSG00000044835.9|ankyrin repeat domain 45
mm10_v2_chr3_-_127408937_127408981	0.738999	Nkx3-1	ENSMUST00000183095.1|Ank2|ENSMUSG00000032826.10|ankyrin 2, brain 	ENSMUST00000182610.1|Ank2|ENSMUSG00000032826.10|ankyrin 2, brain
mm10_v2_chr1_+_161142706_161142767	0.716083	Nkx3-1	ENSMUST00000111608.1|Ankrd45|ENSMUSG00000044835.9|ankyrin repeat domain 45 	ENSMUST00000052245.8|Ankrd45|ENSMUSG00000044835.9|ankyrin repeat domain 45
mm10_v2_chr18_-_6241470_6241482	0.70081	Nkx3-1	ENSMUST00000163210.1|Kif5b|ENSMUSG00000006740.7|kinesin family member 5B
mm10_v2_chr3_-_127409014_127409043	0.68435	Nkx3-1	ENSMUST00000182008.1|Ank2|ENSMUSG00000032826.10|ankyrin 2, brain 	ENSMUST00000182711.1|Ank2|ENSMUSG00000032826.10|ankyrin 2, brain 	ENSMUST00000182547.1|Ank2|ENSMUSG00000032826.10|ankyrin 2, brain
mm10_v2_chr5_-_110046486_110046486	0.664796	Nkx3-1	ENSMUST00000167969.1|Gm17655|ENSMUSG00000090963.1|predicted gene, 17655
mm10_v2_chr19_+_43689672_43689695	0.642857	Nkx3-1	ENSMUST00000081079.5|Entpd7|ENSMUSG00000025192.7|ectonucleoside triphosphate diphosphohydrolase 7
mm10_v2_chr12_-_87233556_87233556	0.631506	Nkx3-1	ENSMUST00000021423.7|Noxred1|ENSMUSG00000072919.3|NADP+ dependent oxidoreductase domain containing 1
mm10_v2_chr18_-_6241486_6241550	0.61938	Nkx3-1	ENSMUST00000025083.7|Kif5b|ENSMUSG00000006740.7|kinesin family member 5B
mm10_v2_chr10_-_62814539_62814540	0.615169	Nkx3-1	ENSMUST00000173087.1|Tet1|ENSMUSG00000047146.9|tet methylcytosine dioxygenase 1 	ENSMUST00000174121.1|Tet1|ENSMUSG00000047146.9|tet methylcytosine dioxygenase 1
mm10_v2_chr14_-_52213379_52213379	0.612091	Nkx3-1	ENSMUST00000140603.1|Chd8|ENSMUSG00000053754.7|chromodomain helicase DNA binding protein 8
mm10_v2_chr11_-_21370452_21370485	0.603102	Nkx3-1	ENSMUST00000102875.4|Ugp2|ENSMUSG00000001891.10|UDP-glucose pyrophosphorylase 2
mm10_v2_chr7_+_139214661_139214681	0.570519	Nkx3-1	ENSMUST00000135509.1|Lrrc27|ENSMUSG00000015980.8|leucine rich repeat containing 27
mm10_v2_chr5_+_90367204_90367204	0.552147	Nkx3-1	ENSMUST00000068250.3|Gm9958|ENSMUSG00000054945.3|predicted gene 9958
mm10_v2_chr17_-_15564322_15564359	0.550835	Nkx3-1	ENSMUST00000147532.1|Prdm9|ENSMUSG00000051977.8|PR domain containing 9
mm10_v2_chr3_-_127408986_127409008	0.550094	Nkx3-1	ENSMUST00000182588.1|Ank2|ENSMUSG00000032826.10|ankyrin 2, brain 	ENSMUST00000182959.1|Ank2|ENSMUSG00000032826.10|ankyrin 2, brain 	ENSMUST00000182452.1|Ank2|ENSMUSG00000032826.10|ankyrin 2, brain
mm10_v2_chr1_-_162478004_162478034	0.545514	Nkx3-1	ENSMUST00000086074.5|Dnm3|ENSMUSG00000040265.10|dynamin 3 	ENSMUST00000070330.7|Dnm3|ENSMUSG00000040265.10|dynamin 3
mm10_v2_chr1_-_193035651_193035728	0.543612	Nkx3-1	ENSMUST00000016344.7|Syt14|ENSMUSG00000016200.8|synaptotagmin XIV
mm10_v2_chr7_+_29768552_29768642	0.524025	Nkx3-1	ENSMUST00000032802.4|Zfp84|ENSMUSG00000046185.10|zinc finger protein 84
mm10_v2_chr10_-_60752773_60752820	0.520716	Nkx3-1	ENSMUST00000117513.1|Slc29a3|ENSMUSG00000020100.9|solute carrier family 29 (nucleoside transporters), member 3 	ENSMUST00000119595.1|Slc29a3|ENSMUSG00000020100.9|solute carrier family 29 (nucleoside transporters), member 3
mm10_v2_chr9_+_74976096_74976177	0.517971	Nkx3-1	ENSMUST00000081746.5|Fam214a|ENSMUSG00000034858.9|family with sequence similarity 214, member A
mm10_v2_chr3_-_127409044_127409064	0.504963	Nkx3-1	ENSMUST00000182704.1|Ank2|ENSMUSG00000032826.10|ankyrin 2, brain
mm10_v2_chr13_-_99900645_99900683	0.496223	Nkx3-1	ENSMUST00000022150.6|Cartpt|ENSMUSG00000021647.6|CART prepropeptide
mm10_v2_chr5_-_86676346_86676369	0.488512	Nkx3-1	ENSMUST00000038448.6|Tmprss11bnl|ENSMUSG00000035861.6|transmembrane protease, serine 11b N terminal like
mm10_v2_chr13_+_80886095_80886201	0.487867	Nkx3-1	ENSMUST00000161441.1|Arrdc3|ENSMUSG00000074794.3|arrestin domain containing 3
mm10_v2_chr10_+_4432467_4432661	0.482147	Nkx3-1	ENSMUST00000095893.4|1700052N19Rik|ENSMUSG00000061759.9|RIKEN cDNA 1700052N19 gene 	ENSMUST00000118544.1|1700052N19Rik|ENSMUSG00000061759.9|RIKEN cDNA 1700052N19 gene 	ENSMUST00000117489.1|1700052N19Rik|ENSMUSG00000061759.9|RIKEN cDNA 1700052N19 gene
mm10_v2_chr12_+_76324905_76324932	0.47714	Nkx3-1	ENSMUST00000172992.1|Akap5|ENSMUSG00000021057.9|A kinase (PRKA) anchor protein 5
mm10_v2_chr1_+_66364623_66364663	0.470572	Nkx3-1	ENSMUST00000077355.5|Map2|ENSMUSG00000015222.11|microtubule-associated protein 2 	ENSMUST00000114012.1|Map2|ENSMUSG00000015222.11|microtubule-associated protein 2
mm10_v2_chr2_-_93849679_93849836	0.460999	Nkx3-1	ENSMUST00000068513.4|Accs|ENSMUSG00000040272.8|1-aminocyclopropane-1-carboxylate synthase (non-functional) 	ENSMUST00000041593.8|Accs|ENSMUSG00000040272.8|1-aminocyclopropane-1-carboxylate synthase (non-functional) 	ENSMUST00000130077.1|Accs|ENSMUSG00000040272.8|1-aminocyclopropane-1-carboxylate synthase (non-functional)
mm10_v2_chr1_-_156034800_156034817	0.443408	Nkx3-1	ENSMUST00000169241.1|Tor1aip1|ENSMUSG00000026466.10|torsin A interacting protein 1
mm10_v2_chrX_+_56317608_56317666	0.439221	Nkx3-1	ENSMUST00000151426.1|1600025M17Rik|ENSMUSG00000085114.1|RIKEN cDNA 1600025M17 gene 	ENSMUST00000138262.1|1600025M17Rik|ENSMUSG00000085114.1|RIKEN cDNA 1600025M17 gene
mm10_v2_chr5_+_72914264_72914304	0.438989	Nkx3-1	ENSMUST00000144843.1|Slain2|ENSMUSG00000036087.12|SLAIN motif family, member 2
mm10_v2_chr9_-_20976762_20976793	0.426265	Nkx3-1	ENSMUST00000054197.5|S1pr2|ENSMUSG00000043895.5|sphingosine-1-phosphate receptor 2
mm10_v2_chr5_+_107597760_107597784	0.423548	Nkx3-1	ENSMUST00000112655.1|Rpap2|ENSMUSG00000033773.8|RNA polymerase II associated protein 2
mm10_v2_chr11_+_46055973_46056068	0.420945	Nkx3-1	ENSMUST00000011400.7|Adam19|ENSMUSG00000011256.10|a disintegrin and metallopeptidase domain 19 (meltrin beta)
mm10_v2_chr10_-_4432285_4432302	0.419538	Nkx3-1	ENSMUST00000155172.1|Rmnd1|ENSMUSG00000019763.5|required for meiotic nuclear division 1 homolog (S. cerevisiae)
mm10_v2_chr10_+_94514825_94514922	0.415123	Nkx3-1	ENSMUST00000065060.5|Tmcc3|ENSMUSG00000020023.11|transmembrane and coiled coil domains 3
mm10_v2_chr10_-_4432312_4432388	0.40744	Nkx3-1	ENSMUST00000126102.1|Rmnd1|ENSMUSG00000019763.5|required for meiotic nuclear division 1 homolog (S. cerevisiae) 	ENSMUST00000131853.1|Rmnd1|ENSMUSG00000019763.5|required for meiotic nuclear division 1 homolog (S. cerevisiae) 	ENSMUST00000042251.4|Rmnd1|ENSMUSG00000019763.5|required for meiotic nuclear division 1 homolog (S. cerevisiae)
mm10_v2_chr19_+_8819401_8819401	0.405745	Nkx3-1	ENSMUST00000096753.3|Hnrnpul2|ENSMUSG00000071659.3|heterogeneous nuclear ribonucleoprotein U-like 2
mm10_v2_chr1_-_53297001_53297023	0.402257	Nkx3-1	ENSMUST00000126590.1|Pms1|ENSMUSG00000026098.7|postmeiotic segregation increased 1 (S. cerevisiae) 	ENSMUST00000126412.1|Pms1|ENSMUSG00000026098.7|postmeiotic segregation increased 1 (S. cerevisiae) 	ENSMUST00000135246.1|Pms1|ENSMUSG00000026098.7|postmeiotic segregation increased 1 (S. cerevisiae) 	ENSMUST00000027267.7|Pms1|ENSMUSG00000026098.7|postmeiotic segregation increased 1 (S. cerevisiae)
mm10_v2_chr7_+_123123870_123123901	0.398078	Nkx3-1	ENSMUST00000094053.5|Tnrc6a|ENSMUSG00000052707.7|trinucleotide repeat containing 6a
mm10_v2_chr19_+_4711153_4711258	0.380949	Nkx3-1	ENSMUST00000008991.6|Sptbn2|ENSMUSG00000067889.4|spectrin beta, non-erythrocytic 2
mm10_v2_chr6_-_108185552_108185587	0.37483	Nkx3-1	ENSMUST00000167338.1|Sumf1|ENSMUSG00000030101.9|sulfatase modifying factor 1 	ENSMUST00000172188.1|Sumf1|ENSMUSG00000030101.9|sulfatase modifying factor 1 	ENSMUST00000032191.9|Sumf1|ENSMUSG00000030101.9|sulfatase modifying factor 1
mm10_v2_chr12_+_76324860_76324898	0.368962	Nkx3-1	ENSMUST00000095610.2|Akap5|ENSMUSG00000021057.9|A kinase (PRKA) anchor protein 5 	ENSMUST00000154078.2|Akap5|ENSMUSG00000021057.9|A kinase (PRKA) anchor protein 5
mm10_v2_chr7_+_75455534_75455629	0.368623	Nkx3-1	ENSMUST00000147005.1|Akap13|ENSMUSG00000066406.8|A kinase (PRKA) anchor protein 13 	ENSMUST00000166315.1|Akap13|ENSMUSG00000066406.8|A kinase (PRKA) anchor protein 13
mm10_v2_chr1_-_133906973_133907014	0.365223	Nkx3-1	ENSMUST00000126123.1|Optc|ENSMUSG00000010311.9|opticin
mm10_v2_chr4_+_32623985_32624084	0.362103	Nkx3-1	ENSMUST00000108178.1|Casp8ap2|ENSMUSG00000028282.6|caspase 8 associated protein 2
mm10_v2_chr7_-_63938862_63938933	0.347787	Nkx3-1	ENSMUST00000063694.8|Klf13|ENSMUSG00000052040.9|Kruppel-like factor 13
mm10_v2_chr16_-_11909398_11909445	0.318289	Nkx3-1	ENSMUST00000127972.1|Cpped1|ENSMUSG00000065979.6|calcineurin-like phosphoesterase domain containing 1 	ENSMUST00000121750.1|Cpped1|ENSMUSG00000065979.6|calcineurin-like phosphoesterase domain containing 1 	ENSMUST00000096272.4|Cpped1|ENSMUSG00000065979.6|calcineurin-like phosphoesterase domain containing 1 	ENSMUST00000073371.6|Cpped1|ENSMUSG00000065979.6|calcineurin-like phosphoesterase domain containing 1
mm10_v2_chr2_+_23068168_23068241	0.311668	Nkx3-1	ENSMUST00000028121.7|Acbd5|ENSMUSG00000026781.9|acyl-Coenzyme A binding domain containing 5 	ENSMUST00000114523.2|Acbd5|ENSMUSG00000026781.9|acyl-Coenzyme A binding domain containing 5 	ENSMUST00000144088.1|Acbd5|ENSMUSG00000026781.9|acyl-Coenzyme A binding domain containing 5
mm10_v2_chr3_+_30792876_30792876	0.29945	Nkx3-1	ENSMUST00000029256.7|Sec62|ENSMUSG00000027706.7|SEC62 homolog (S. cerevisiae)
mm10_v2_chr19_-_59943000_59943100	0.299257	Nkx3-1	ENSMUST00000170819.1|Rab11fip2|ENSMUSG00000040022.8|RAB11 family interacting protein 2 (class I)
mm10_v2_chr10_-_128211788_128211823	0.296099	Nkx3-1	ENSMUST00000061995.8|Spryd4|ENSMUSG00000051346.8|SPRY domain containing 4
mm10_v2_chrX_-_111537947_111537964	0.288776	Nkx3-1	ENSMUST00000132319.1|Rps6ka6|ENSMUSG00000025665.10|ribosomal protein S6 kinase polypeptide 6 	ENSMUST00000123951.1|Rps6ka6|ENSMUSG00000025665.10|ribosomal protein S6 kinase polypeptide 6
mm10_v2_chr1_-_133907053_133907172	0.285919	Nkx3-1	ENSMUST00000149380.1|Optc|ENSMUSG00000010311.9|opticin 	ENSMUST00000124051.2|Optc|ENSMUSG00000010311.9|opticin
mm10_v2_chr7_+_100537052_100537139	0.274378	Nkx3-1	ENSMUST00000054310.3|Coa4|ENSMUSG00000044881.6|cytochrome c oxidase assembly factor 4
mm10_v2_chr4_+_110397764_110397808	0.26758	Nkx3-1	ENSMUST00000097920.2|Agbl4|ENSMUSG00000061298.8|ATP/GTP binding protein-like 4 	ENSMUST00000080744.6|Agbl4|ENSMUSG00000061298.8|ATP/GTP binding protein-like 4
mm10_v2_chr8_-_41041828_41041866	0.258526	Nkx3-1	ENSMUST00000051379.7|Mtus1|ENSMUSG00000045636.10|mitochondrial tumor suppressor 1
mm10_v2_chr10_+_100488289_100488289	0.256118	Nkx3-1	ENSMUST00000164751.1|Cep290|ENSMUSG00000019971.9|centrosomal protein 290
mm10_v2_chr3_-_104818539_104818572	0.2514	Nkx3-1	ENSMUST00000106774.1|Mov10|ENSMUSG00000002227.9|Moloney leukemia virus 10 	ENSMUST00000106775.1|Mov10|ENSMUSG00000002227.9|Moloney leukemia virus 10 	ENSMUST00000166979.1|Mov10|ENSMUSG00000002227.9|Moloney leukemia virus 10 	ENSMUST00000136148.1|Mov10|ENSMUSG00000002227.9|Moloney leukemia virus 10
mm10_v2_chr4_+_134397380_134397471	0.25024	Nkx3-1	ENSMUST00000105870.1|Pafah2|ENSMUSG00000037366.8|platelet-activating factor acetylhydrolase 2
mm10_v2_chr19_+_5406815_5406880	0.248402	Nkx3-1	ENSMUST00000174412.1|4930481A15Rik|ENSMUSG00000086938.2|RIKEN cDNA 4930481A15 gene 	ENSMUST00000153017.2|4930481A15Rik|ENSMUSG00000086938.2|RIKEN cDNA 4930481A15 gene
mm10_v2_chr10_+_90576872_90576992	0.247343	Nkx3-1	ENSMUST00000182550.1|Anks1b|ENSMUSG00000058589.8|ankyrin repeat and sterile alpha motif domain containing 1B 	ENSMUST00000099364.5|Anks1b|ENSMUSG00000058589.8|ankyrin repeat and sterile alpha motif domain containing 1B
mm10_v2_chr10_+_90576777_90576815	0.241793	Nkx3-1	ENSMUST00000183136.1|Anks1b|ENSMUSG00000058589.8|ankyrin repeat and sterile alpha motif domain containing 1B 	ENSMUST00000182595.1|Anks1b|ENSMUSG00000058589.8|ankyrin repeat and sterile alpha motif domain containing 1B
mm10_v2_chr8_-_95807458_95807471	0.240127	Nkx3-1	ENSMUST00000098473.4|Cnot1|ENSMUSG00000036550.9|CCR4-NOT transcription complex, subunit 1 	ENSMUST00000068452.8|Cnot1|ENSMUSG00000036550.9|CCR4-NOT transcription complex, subunit 1
mm10_v2_chrX_+_163911401_163911439	0.234415	Nkx3-1	ENSMUST00000140845.1|Ap1s2|ENSMUSG00000031367.9|adaptor-related protein complex 1, sigma 2 subunit
mm10_v2_chr7_+_58658181_58658294	0.23261	Nkx3-1	ENSMUST00000168747.1|Atp10a|ENSMUSG00000025324.7|ATPase, class V, type 10A
mm10_v2_chr3_-_57575907_57575912	0.232604	Nkx3-1	ENSMUST00000120977.1|Wwtr1|ENSMUSG00000027803.8|WW domain containing transcription regulator 1
mm10_v2_chr17_+_37270214_37270249	0.229952	Nkx3-1	ENSMUST00000038580.6|H2-M3|ENSMUSG00000016206.6|histocompatibility 2, M region locus 3
mm10_v2_chr11_-_106193511_106193584	0.226556	Nkx3-1	ENSMUST00000007444.7|Strada|ENSMUSG00000069631.8|STE20-related kinase adaptor alpha 	ENSMUST00000152008.1|Strada|ENSMUSG00000069631.8|STE20-related kinase adaptor alpha 	ENSMUST00000103072.3|Strada|ENSMUSG00000069631.8|STE20-related kinase adaptor alpha 	ENSMUST00000106867.1|Strada|ENSMUSG00000069631.8|STE20-related kinase adaptor alpha
mm10_v2_chr2_+_110597298_110597316	0.222414	Nkx3-1	ENSMUST00000045972.6|Slc5a12|ENSMUSG00000041644.8|solute carrier family 5 (sodium/glucose cotransporter), member 12 	ENSMUST00000111026.2|Slc5a12|ENSMUSG00000041644.8|solute carrier family 5 (sodium/glucose cotransporter), member 12
mm10_v2_chr4_+_33310306_33310387	0.220351	Nkx3-1	ENSMUST00000108153.2|Rngtt|ENSMUSG00000028274.11|RNA guanylyltransferase and 5'-phosphatase 	ENSMUST00000029942.7|Rngtt|ENSMUSG00000028274.11|RNA guanylyltransferase and 5'-phosphatase
mm10_v2_chr9_+_78051938_78051958	0.217066	Nkx3-1	ENSMUST00000024104.7|Gcm1|ENSMUSG00000023333.7|glial cells missing homolog 1 (Drosophila)
mm10_v2_chr12_-_102758672_102758672	0.21264	Nkx3-1	ENSMUST00000174651.1|Gm20604|ENSMUSG00000041716.7|predicted gene 20604
mm10_v2_chr17_-_56982120_56982161	0.207159	Nkx3-1	ENSMUST00000056113.4|Acer1|ENSMUSG00000045019.4|alkaline ceramidase 1
mm10_v2_chr5_-_8422582_8422693	0.206912	Nkx3-1	ENSMUST00000168500.1|Dbf4|ENSMUSG00000002297.9|DBF4 homolog (S. cerevisiae) 	ENSMUST00000002368.9|Dbf4|ENSMUSG00000002297.9|DBF4 homolog (S. cerevisiae)
mm10_v2_chr3_-_57575760_57575836	0.206128	Nkx3-1	ENSMUST00000029380.7|Wwtr1|ENSMUSG00000027803.8|WW domain containing transcription regulator 1
mm10_v2_chr9_+_40873981_40874127	0.200848	Nkx3-1	ENSMUST00000067375.3|Bsx|ENSMUSG00000054360.3|brain specific homeobox
mm10_v2_chr8_-_69791170_69791212	0.191639	Nkx3-1	ENSMUST00000131784.1|Zfp866|ENSMUSG00000043090.12|zinc finger protein 866
mm10_v2_chr2_+_3114220_3114225	0.191239	Nkx3-1	ENSMUST00000072955.5|Fam171a1|ENSMUSG00000050530.8|family with sequence similarity 171, member A1
mm10_v2_chr8_+_114133635_114133662	0.190547	Nkx3-1	ENSMUST00000147605.1|Nudt7|ENSMUSG00000031767.7|nudix (nucleoside diphosphate linked moiety X)-type motif 7 	ENSMUST00000134593.1|Nudt7|ENSMUSG00000031767.7|nudix (nucleoside diphosphate linked moiety X)-type motif 7
mm10_v2_chr9_+_72438519_72438533	0.188167	Nkx3-1	ENSMUST00000184604.1|Mns1|ENSMUSG00000032221.8|meiosis-specific nuclear structural protein 1
mm10_v2_chr18_+_82910863_82910885	0.182092	Nkx3-1	ENSMUST00000171238.1|Zfp516|ENSMUSG00000058881.6|zinc finger protein 516
mm10_v2_chrX_-_100625901_100625954	0.180061	Nkx3-1	ENSMUST00000059099.6|Pdzd11|ENSMUSG00000015668.7|PDZ domain containing 11
mm10_v2_chr11_-_83302586_83302637	0.177827	Nkx3-1	ENSMUST00000176374.1|Pex12|ENSMUSG00000018733.4|peroxisomal biogenesis factor 12
mm10_v2_chr5_-_21785115_21785251	0.176421	Nkx3-1	ENSMUST00000115193.1|Dnajc2|ENSMUSG00000029014.8|DnaJ (Hsp40) homolog, subfamily C, member 2 	ENSMUST00000115192.1|Dnajc2|ENSMUSG00000029014.8|DnaJ (Hsp40) homolog, subfamily C, member 2 	ENSMUST00000115195.1|Dnajc2|ENSMUSG00000029014.8|DnaJ (Hsp40) homolog, subfamily C, member 2 	ENSMUST00000030771.5|Dnajc2|ENSMUSG00000029014.8|DnaJ (Hsp40) homolog, subfamily C, member 2
mm10_v2_chr2_+_62664279_62664300	0.173226	Nkx3-1	ENSMUST00000028257.2|Gca|ENSMUSG00000026893.4|grancalcin
mm10_v2_chr13_+_23571382_23571396	0.16791	Nkx3-1	ENSMUST00000079251.5|Hist1h2bg|ENSMUSG00000058385.6|histone cluster 1, H2bg
mm10_v2_chr5_-_149051300_149051390	0.160578	Nkx3-1	ENSMUST00000110505.1|Hmgb1|ENSMUSG00000066551.6|high mobility group box 1
mm10_v2_chr10_+_90576570_90576668	0.160144	Nkx3-1	ENSMUST00000182786.1|Anks1b|ENSMUSG00000058589.8|ankyrin repeat and sterile alpha motif domain containing 1B 	ENSMUST00000182600.1|Anks1b|ENSMUSG00000058589.8|ankyrin repeat and sterile alpha motif domain containing 1B
mm10_v2_chr7_-_127930066_127930122	0.160044	Nkx3-1	ENSMUST00000032988.8|Prss8|ENSMUSG00000030800.9|protease, serine, 8 (prostasin)
mm10_v2_chr10_+_90576678_90576691	0.159575	Nkx3-1	ENSMUST00000182284.1|Anks1b|ENSMUSG00000058589.8|ankyrin repeat and sterile alpha motif domain containing 1B
mm10_v2_chr4_+_116708571_116708609	0.159434	Nkx3-1	ENSMUST00000106462.2|Ccdc163|ENSMUSG00000028689.8|coiled-coil domain containing 163 	ENSMUST00000138305.1|Ccdc163|ENSMUSG00000028689.8|coiled-coil domain containing 163 	ENSMUST00000125671.1|Ccdc163|ENSMUSG00000028689.8|coiled-coil domain containing 163 	ENSMUST00000130828.1|Ccdc163|ENSMUSG00000028689.8|coiled-coil domain containing 163
mm10_v2_chr17_+_84956718_84956745	0.154218	Nkx3-1	ENSMUST00000112305.3|Ppm1b|ENSMUSG00000061130.6|protein phosphatase 1B, magnesium dependent, beta isoform
mm10_v2_chr9_+_108049254_108049339	0.149826	Nkx3-1	ENSMUST00000112295.2|Gmppb|ENSMUSG00000070284.4|GDP-mannose pyrophosphorylase B 	ENSMUST00000047947.7|Gmppb|ENSMUSG00000070284.4|GDP-mannose pyrophosphorylase B
mm10_v2_chr6_+_86078070_86078089	0.145976	Nkx3-1	ENSMUST00000032069.5|Add2|ENSMUSG00000030000.8|adducin 2 (beta)
mm10_v2_chr10_-_12861735_12861735	0.143829	Nkx3-1	ENSMUST00000076817.4|Utrn|ENSMUSG00000019820.9|utrophin
mm10_v2_chr17_-_35162969_35163040	0.14377	Nkx3-1	ENSMUST00000174805.1|Prrc2a|ENSMUSG00000024393.8|proline-rich coiled-coil 2A
mm10_v2_chr14_+_47663756_47663756	0.138624	Nkx3-1	ENSMUST00000022391.7|Ktn1|ENSMUSG00000021843.10|kinectin 1
mm10_v2_chr8_-_106011422_106011486	0.13353	Nkx3-1	ENSMUST00000058579.5|Ddx28|ENSMUSG00000045538.5|DEAD (Asp-Glu-Ala-Asp) box polypeptide 28
mm10_v2_chr14_+_79515618_79515694	0.132319	Nkx3-1	ENSMUST00000110835.1|Elf1|ENSMUSG00000036461.9|E74-like factor 1
mm10_v2_chr12_-_78983476_78983493	0.131414	Nkx3-1	ENSMUST00000070174.7|Tmem229b|ENSMUSG00000046157.7|transmembrane protein 229B
mm10_v2_chrX_-_101222426_101222563	0.131009	Nkx3-1	ENSMUST00000120389.1|Snx12|ENSMUSG00000046032.10|sorting nexin 12 	ENSMUST00000156473.1|Snx12|ENSMUSG00000046032.10|sorting nexin 12 	ENSMUST00000077876.3|Snx12|ENSMUSG00000046032.10|sorting nexin 12
mm10_v2_chr4_+_110397661_110397708	0.126167	Nkx3-1	ENSMUST00000106589.2|Agbl4|ENSMUSG00000061298.8|ATP/GTP binding protein-like 4 	ENSMUST00000106587.2|Agbl4|ENSMUSG00000061298.8|ATP/GTP binding protein-like 4 	ENSMUST00000106591.1|Agbl4|ENSMUSG00000061298.8|ATP/GTP binding protein-like 4 	ENSMUST00000106592.1|Agbl4|ENSMUSG00000061298.8|ATP/GTP binding protein-like 4
mm10_v2_chr14_-_55788810_55788857	0.118944	Nkx3-1	ENSMUST00000022830.6|Ripk3|ENSMUSG00000022221.7|receptor-interacting serine-threonine kinase 3 	ENSMUST00000168716.1|Ripk3|ENSMUSG00000022221.7|receptor-interacting serine-threonine kinase 3 	ENSMUST00000178399.1|Ripk3|ENSMUSG00000022221.7|receptor-interacting serine-threonine kinase 3
mm10_v2_chr9_-_89092835_89092835	0.117582	Nkx3-1	ENSMUST00000167113.1|Trim43b|ENSMUSG00000079162.2|tripartite motif-containing 43B
mm10_v2_chr7_-_121035096_121035096	0.107098	Nkx3-1	ENSMUST00000065740.2|Gm9905|ENSMUSG00000053358.2|predicted gene 9905
mm10_v2_chr7_-_35318408_35318440	0.105514	Nkx3-1	ENSMUST00000079693.5|Gpatch1|ENSMUSG00000063808.8|G patch domain containing 1
mm10_v2_chr5_-_69592274_69592308	0.0979307	Nkx3-1	ENSMUST00000174233.1|Gnpda2|ENSMUSG00000029209.9|glucosamine-6-phosphate deaminase 2 	ENSMUST00000120789.1|Gnpda2|ENSMUSG00000029209.9|glucosamine-6-phosphate deaminase 2 	ENSMUST00000166298.1|Gnpda2|ENSMUSG00000029209.9|glucosamine-6-phosphate deaminase 2
mm10_v2_chr18_-_42262053_42262140	0.0948645	Nkx3-1	ENSMUST00000097590.3|Lars|ENSMUSG00000024493.8|leucyl-tRNA synthetase
mm10_v2_chr13_-_74482943_74482943	0.092729	Nkx3-1	ENSMUST00000074369.6|Zfp825|ENSMUSG00000069208.5|zinc finger protein 825
mm10_v2_chr11_+_69098937_69098985	0.0924231	Nkx3-1	ENSMUST00000021271.7|Per1|ENSMUSG00000020893.11|period circadian clock 1
mm10_v2_chr9_+_72438534_72438578	0.0918561	Nkx3-1	ENSMUST00000034746.8|Mns1|ENSMUSG00000032221.8|meiosis-specific nuclear structural protein 1
mm10_v2_chrX_+_164269371_164269522	0.0870927	Nkx3-1	ENSMUST00000145412.1|Pir|ENSMUSG00000031379.7|pirin 	ENSMUST00000033749.7|Pir|ENSMUSG00000031379.7|pirin
mm10_v2_chr4_-_121017201_121017261	0.0859218	Nkx3-1	ENSMUST00000043200.7|Smap2|ENSMUSG00000032870.8|small ArfGAP 2
mm10_v2_chr9_-_43116514_43116572	0.0805536	Nkx3-1	ENSMUST00000061833.4|Tmem136|ENSMUSG00000048503.6|transmembrane protein 136
mm10_v2_chr7_-_44257378_44257378	0.0804195	Nkx3-1	ENSMUST00000107945.1|Acpt|ENSMUSG00000012777.8|acid phosphatase, testicular 	ENSMUST00000118216.1|Acpt|ENSMUSG00000012777.8|acid phosphatase, testicular
mm10_v2_chr11_-_45955183_45955193	0.0778826	Nkx3-1	ENSMUST00000109254.1|Thg1l|ENSMUSG00000011254.10|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)
mm10_v2_chr14_-_104522615_104522707	0.0743368	Nkx3-1	ENSMUST00000022716.2|Rnf219|ENSMUSG00000022120.3|ring finger protein 219
mm10_v2_chr1_+_16665189_16665264	0.069417	Nkx3-1	ENSMUST00000177501.1|Tmem70|ENSMUSG00000025940.6|transmembrane protein 70 	ENSMUST00000065373.5|Tmem70|ENSMUSG00000025940.6|transmembrane protein 70
mm10_v2_chr17_-_21933022_21933022	0.0658729	Nkx3-1	ENSMUST00000074295.7|Zfp942|ENSMUSG00000071267.5|zinc finger protein 942
mm10_v2_chr11_-_103697661_103697718	0.0651844	Nkx3-1	ENSMUST00000107013.2|Gosr2|ENSMUSG00000020946.7|golgi SNAP receptor complex member 2
mm10_v2_chr12_-_54695813_54695828	0.0642835	Nkx3-1	ENSMUST00000110713.3|Eapp|ENSMUSG00000054302.9|E2F-associated phosphoprotein
mm10_v2_chr10_-_13324160_13324242	0.0624771	Nkx3-1	ENSMUST00000105545.4|Phactr2|ENSMUSG00000062866.9|phosphatase and actin regulator 2
mm10_v2_chr8_+_106011491_106011526	0.0615837	Nkx3-1	ENSMUST00000034375.4|Dus2l|ENSMUSG00000031901.6|dihydrouridine synthase 2-like (SMM1, S. cerevisiae) 	ENSMUST00000119736.1|Dus2l|ENSMUSG00000031901.6|dihydrouridine synthase 2-like (SMM1, S. cerevisiae)
mm10_v2_chr10_+_90576708_90576766	0.0570661	Nkx3-1	ENSMUST00000182430.1|Anks1b|ENSMUSG00000058589.8|ankyrin repeat and sterile alpha motif domain containing 1B 	ENSMUST00000182960.1|Anks1b|ENSMUSG00000058589.8|ankyrin repeat and sterile alpha motif domain containing 1B 	ENSMUST00000182045.1|Anks1b|ENSMUSG00000058589.8|ankyrin repeat and sterile alpha motif domain containing 1B 	ENSMUST00000182083.1|Anks1b|ENSMUSG00000058589.8|ankyrin repeat and sterile alpha motif domain containing 1B
mm10_v2_chr5_+_136919137_136919188	0.0569201	Nkx3-1	ENSMUST00000181045.1|4933404O12Rik|ENSMUSG00000097908.1|RIKEN cDNA 4933404O12 gene
mm10_v2_chr9_+_77921908_77921932	0.0435875	Nkx3-1	ENSMUST00000133757.1|Elovl5|ENSMUSG00000032349.7|ELOVL family member 5, elongation of long chain fatty acids (yeast)
mm10_v2_chr11_+_101279092_101279111	0.0371321	Nkx3-1	ENSMUST00000103107.4|Cntd1|ENSMUSG00000078653.4|cyclin N-terminal domain containing 1
mm10_v2_chr13_-_41847482_41847490	0.0289977	Nkx3-1	ENSMUST00000072012.3|Adtrp|ENSMUSG00000058022.7|androgen dependent TFPI regulating protein
mm10_v2_chr1_+_152954966_152955101	0.0262162	Nkx3-1	ENSMUST00000043313.8|Nmnat2|ENSMUSG00000042751.8|nicotinamide nucleotide adenylyltransferase 2
mm10_v2_chr4_-_140774196_140774236	0.0231796	Nkx3-1	ENSMUST00000026381.6|Padi4|ENSMUSG00000025330.6|peptidyl arginine deiminase, type IV
mm10_v2_chr2_+_71873224_71873326	0.0224186	Nkx3-1	ENSMUST00000006669.5|Pdk1|ENSMUSG00000006494.5|pyruvate dehydrogenase kinase, isoenzyme 1
mm10_v2_chr14_-_54864055_54864158	0.0191139	Nkx3-1	ENSMUST00000142283.2|Homez|ENSMUSG00000057156.9|homeodomain leucine zipper-encoding gene
mm10_v2_chr12_+_52516077_52516077	0.0143794	Nkx3-1	ENSMUST00000110725.1|Arhgap5|ENSMUSG00000035133.8|Rho GTPase activating protein 5
mm10_v2_chr4_+_3940747_3940854	0.0134839	Nkx3-1	ENSMUST00000119403.1|Chchd7|ENSMUSG00000042198.6|coiled-coil-helix-coiled-coil-helix domain containing 7
mm10_v2_chr17_+_35135196_35135243	0.0110884	Nkx3-1	ENSMUST00000172571.1|Bag6|ENSMUSG00000024392.11|BCL2-associated athanogene 6 	ENSMUST00000173491.1|Bag6|ENSMUSG00000024392.11|BCL2-associated athanogene 6
mm10_v2_chr14_-_46831984_46832057	0.00998973	Nkx3-1	ENSMUST00000181311.1|Gm10101|ENSMUSG00000061510.3|predicted gene 10101 	ENSMUST00000074862.2|Gm10101|ENSMUSG00000061510.3|predicted gene 10101
mm10_v2_chr9_-_35570393_35570402	0.00516614	Nkx3-1	ENSMUST00000115110.4|Hyls1|ENSMUSG00000050555.9|hydrolethalus syndrome 1
mm10_v2_chr5_+_8422831_8422906	0.00162407	Nkx3-1	ENSMUST00000066921.3|Slc25a40|ENSMUSG00000054099.5|solute carrier family 25, member 40
mm10_v2_chr10_-_62486575_62486604	0.00018536	Nkx3-1	ENSMUST00000092473.3|Vps26a|ENSMUSG00000020078.9|vacuolar protein sorting 26 homolog A (yeast)
