mm10_v2_chr18_+_60925644_60925725	2.94229	Rfx3_Rfx1_Rfx4	ENSMUST00000115297.1|Camk2a|ENSMUSG00000024617.10|calcium/calmodulin-dependent protein kinase II alpha
mm10_v2_chr18_+_60925612_60925639	2.08032	Rfx3_Rfx1_Rfx4	ENSMUST00000102888.3|Camk2a|ENSMUSG00000024617.10|calcium/calmodulin-dependent protein kinase II alpha 	ENSMUST00000025519.4|Camk2a|ENSMUSG00000024617.10|calcium/calmodulin-dependent protein kinase II alpha
mm10_v2_chr5_+_24985840_24985862	1.54476	Rfx3_Rfx1_Rfx4	ENSMUST00000075081.6|1500035N22Rik|ENSMUSG00000059631.6|RIKEN cDNA 1500035N22 gene
mm10_v2_chr12_-_84148449_84148499	1.42368	Rfx3_Rfx1_Rfx4	ENSMUST00000061425.2|Pnma1|ENSMUSG00000054383.2|paraneoplastic antigen MA1
mm10_v2_chr19_-_57197435_57197460	1.42285	Rfx3_Rfx1_Rfx4	ENSMUST00000111550.1|Ablim1|ENSMUSG00000025085.10|actin-binding LIM protein 1
mm10_v2_chr19_-_57197496_57197536	1.38205	Rfx3_Rfx1_Rfx4	ENSMUST00000111544.1|Ablim1|ENSMUSG00000025085.10|actin-binding LIM protein 1
mm10_v2_chr19_-_57197377_57197417	1.37227	Rfx3_Rfx1_Rfx4	ENSMUST00000111546.1|Ablim1|ENSMUSG00000025085.10|actin-binding LIM protein 1
mm10_v2_chr8_-_64733534_64733554	1.33713	Rfx3_Rfx1_Rfx4	ENSMUST00000141021.1|Sc4mol|ENSMUSG00000031604.4|sterol-C4-methyl oxidase-like
mm10_v2_chr4_-_119415494_119415522	1.32442	Rfx3_Rfx1_Rfx4	ENSMUST00000063642.2|Ccdc30|ENSMUSG00000028637.9|coiled-coil domain containing 30
mm10_v2_chr4_+_123183456_123183601	1.30391	Rfx3_Rfx1_Rfx4	ENSMUST00000126995.1|Hpcal4|ENSMUSG00000046093.3|hippocalcin-like 4
mm10_v2_chr11_-_105944128_105944223	1.25166	Rfx3_Rfx1_Rfx4	ENSMUST00000184086.1|Cyb561|ENSMUSG00000019590.10|cytochrome b-561
mm10_v2_chr2_+_121289589_121289606	1.18669	Rfx3_Rfx1_Rfx4	ENSMUST00000094639.3|Map1a|ENSMUSG00000027254.7|microtubule-associated protein 1 A
mm10_v2_chr4_+_57434247_57434368	1.13417	Rfx3_Rfx1_Rfx4	ENSMUST00000102905.1|Palm2|ENSMUSG00000090053.3|paralemmin 2
mm10_v2_chr1_+_66386968_66386999	1.13131	Rfx3_Rfx1_Rfx4	ENSMUST00000145419.1|Map2|ENSMUSG00000015222.11|microtubule-associated protein 2
mm10_v2_chr15_+_98167806_98167873	1.11901	Rfx3_Rfx1_Rfx4	ENSMUST00000031914.4|AI836003|ENSMUSG00000029875.4|expressed sequence AI836003
mm10_v2_chr7_+_99268338_99268388	1.08801	Rfx3_Rfx1_Rfx4	ENSMUST00000107100.2|Map6|ENSMUSG00000055407.7|microtubule-associated protein 6
mm10_v2_chr8_+_123212857_123212911	1.07536	Rfx3_Rfx1_Rfx4	ENSMUST00000060133.6|Spata33|ENSMUSG00000048478.6|spermatogenesis associated 33
mm10_v2_chr19_-_57197556_57197631	1.06158	Rfx3_Rfx1_Rfx4	ENSMUST00000099294.2|Ablim1|ENSMUSG00000025085.10|actin-binding LIM protein 1
mm10_v2_chr9_-_121839460_121839465	1.05278	Rfx3_Rfx1_Rfx4	ENSMUST00000135986.2|Ccdc13|ENSMUSG00000079235.4|coiled-coil domain containing 13
mm10_v2_chr7_+_131966446_131966469	1.0491	Rfx3_Rfx1_Rfx4	ENSMUST00000045840.4|Gpr26|ENSMUSG00000040125.4|G protein-coupled receptor 26
mm10_v2_chr1_+_161142661_161142701	1.03647	Rfx3_Rfx1_Rfx4	ENSMUST00000125018.1|Ankrd45|ENSMUSG00000044835.9|ankyrin repeat domain 45
mm10_v2_chr11_-_105944412_105944518	1.02457	Rfx3_Rfx1_Rfx4	ENSMUST00000019734.4|Cyb561|ENSMUSG00000019590.10|cytochrome b-561 	ENSMUST00000184269.1|Cyb561|ENSMUSG00000019590.10|cytochrome b-561 	ENSMUST00000150563.1|Cyb561|ENSMUSG00000019590.10|cytochrome b-561
mm10_v2_chr7_+_3290553_3290586	0.994734	Rfx3_Rfx1_Rfx4	ENSMUST00000096744.5|Myadm|ENSMUSG00000068566.6|myeloid-associated differentiation marker
mm10_v2_chr11_+_70029742_70029837	0.974097	Rfx3_Rfx1_Rfx4	ENSMUST00000132597.2|Dlg4|ENSMUSG00000020886.10|discs, large homolog 4 (Drosophila)
mm10_v2_chr12_+_5411641_5411641	0.927094	Rfx3_Rfx1_Rfx4	ENSMUST00000163627.1|2810032G03Rik|ENSMUSG00000037735.6|RIKEN cDNA 2810032G03 gene
mm10_v2_chr10_-_81472859_81473127	0.926219	Rfx3_Rfx1_Rfx4	ENSMUST00000147524.1|Celf5|ENSMUSG00000034818.10|CUGBP, Elav-like family member 5 	ENSMUST00000119060.1|Celf5|ENSMUSG00000034818.10|CUGBP, Elav-like family member 5
mm10_v2_chr6_-_39725193_39725357	0.925908	Rfx3_Rfx1_Rfx4	ENSMUST00000101497.3|Braf|ENSMUSG00000002413.9|Braf transforming gene
mm10_v2_chr7_+_16959714_16959800	0.904171	Rfx3_Rfx1_Rfx4	ENSMUST00000038163.6|Pnmal1|ENSMUSG00000041141.6|PNMA-like 1
mm10_v2_chr15_-_103215285_103215366	0.88937	Rfx3_Rfx1_Rfx4	ENSMUST00000122182.1|Cbx5|ENSMUSG00000009575.8|chromobox 5 	ENSMUST00000108813.3|Cbx5|ENSMUSG00000009575.8|chromobox 5 	ENSMUST00000127191.1|Cbx5|ENSMUSG00000009575.8|chromobox 5
mm10_v2_chr15_-_33687840_33687883	0.886411	Rfx3_Rfx1_Rfx4	ENSMUST00000042021.3|Tspyl5|ENSMUSG00000038984.3|testis-specific protein, Y-encoded-like 5
mm10_v2_chr5_+_111581422_111581422	0.868185	Rfx3_Rfx1_Rfx4	ENSMUST00000064930.3|C130026L21Rik|ENSMUSG00000052848.3|RIKEN cDNA C130026L21 gene
mm10_v2_chr13_+_24845122_24845186	0.861837	Rfx3_Rfx1_Rfx4	ENSMUST00000006893.8|D130043K22Rik|ENSMUSG00000006711.9|RIKEN cDNA D130043K22 gene
mm10_v2_chr2_-_118256929_118256973	0.860162	Rfx3_Rfx1_Rfx4	ENSMUST00000028820.6|Fsip1|ENSMUSG00000027344.7|fibrous sheath-interacting protein 1 	ENSMUST00000028821.3|Fsip1|ENSMUSG00000027344.7|fibrous sheath-interacting protein 1
mm10_v2_chr11_-_97766508_97766574	0.84948	Rfx3_Rfx1_Rfx4	ENSMUST00000107579.1|Cwc25|ENSMUSG00000018541.4|CWC25 spliceosome-associated protein homolog (S. cerevisiae) 	ENSMUST00000018685.2|Cwc25|ENSMUSG00000018541.4|CWC25 spliceosome-associated protein homolog (S. cerevisiae)
mm10_v2_chr17_+_80290206_80290279	0.840628	Rfx3_Rfx1_Rfx4	ENSMUST00000061703.9|Morn2|ENSMUSG00000045257.9|MORN repeat containing 2
mm10_v2_chr1_+_161142706_161142767	0.821625	Rfx3_Rfx1_Rfx4	ENSMUST00000111608.1|Ankrd45|ENSMUSG00000044835.9|ankyrin repeat domain 45 	ENSMUST00000052245.8|Ankrd45|ENSMUSG00000044835.9|ankyrin repeat domain 45
mm10_v2_chr3_+_103968588_103968661	0.816484	Rfx3_Rfx1_Rfx4	ENSMUST00000156262.1|Phtf1|ENSMUSG00000058388.8|putative homeodomain transcription factor 1
mm10_v2_chr16_-_16829276_16829349	0.753282	Rfx3_Rfx1_Rfx4	ENSMUST00000023468.5|Spag6|ENSMUSG00000022783.5|sperm associated antigen 6
mm10_v2_chr9_-_51008936_51009080	0.750819	Rfx3_Rfx1_Rfx4	ENSMUST00000176824.1|Sik2|ENSMUSG00000037112.10|salt inducible kinase 2 	ENSMUST00000176663.1|Sik2|ENSMUSG00000037112.10|salt inducible kinase 2 	ENSMUST00000041375.10|Sik2|ENSMUSG00000037112.10|salt inducible kinase 2
mm10_v2_chr5_-_149636164_149636190	0.733765	Rfx3_Rfx1_Rfx4	ENSMUST00000076410.4|Hsph1|ENSMUSG00000029657.9|heat shock 105kDa/110kDa protein 1
mm10_v2_chr16_+_14906622_14906680	0.73324	Rfx3_Rfx1_Rfx4	ENSMUST00000090277.1|Efcab1|ENSMUSG00000068617.4|EF hand calcium binding domain 1
mm10_v2_chr4_-_129662442_129662485	0.728258	Rfx3_Rfx1_Rfx4	ENSMUST00000003828.4|Kpna6|ENSMUSG00000003731.7|karyopherin (importin) alpha 6
mm10_v2_chr6_-_115838412_115838412	0.700447	Rfx3_Rfx1_Rfx4	ENSMUST00000032468.5|Efcab12|ENSMUSG00000030321.9|EF-hand calcium binding domain 12 	ENSMUST00000184428.1|Efcab12|ENSMUSG00000030321.9|EF-hand calcium binding domain 12
mm10_v2_chr14_+_60378242_60378292	0.685633	Rfx3_Rfx1_Rfx4	ENSMUST00000022561.6|Amer2|ENSMUSG00000021986.7|APC membrane recruitment 2
mm10_v2_chr17_-_85090204_85090275	0.679235	Rfx3_Rfx1_Rfx4	ENSMUST00000072406.3|Prepl|ENSMUSG00000024127.8|prolyl endopeptidase-like 	ENSMUST00000171795.1|Prepl|ENSMUSG00000024127.8|prolyl endopeptidase-like
mm10_v2_chr2_-_134644079_134644109	0.675309	Rfx3_Rfx1_Rfx4	ENSMUST00000110119.1|Tmx4|ENSMUSG00000034723.5|thioredoxin-related transmembrane protein 4
mm10_v2_chr9_-_72985344_72985397	0.663822	Rfx3_Rfx1_Rfx4	ENSMUST00000124565.2|Gm5918|ENSMUSG00000086158.2|predicted gene 5918
mm10_v2_chr18_-_77047243_77047279	0.653237	Rfx3_Rfx1_Rfx4	ENSMUST00000137354.1|Katnal2|ENSMUSG00000025420.7|katanin p60 subunit A-like 2 	ENSMUST00000137498.1|Katnal2|ENSMUSG00000025420.7|katanin p60 subunit A-like 2
mm10_v2_chr12_-_69790660_69790735	0.648388	Rfx3_Rfx1_Rfx4	ENSMUST00000021377.4|Cdkl1|ENSMUSG00000020990.4|cyclin-dependent kinase-like 1 (CDC2-related kinase)
mm10_v2_chr5_+_29195983_29196032	0.629072	Rfx3_Rfx1_Rfx4	ENSMUST00000160888.1|Rnf32|ENSMUSG00000029130.6|ring finger protein 32 	ENSMUST00000159272.1|Rnf32|ENSMUSG00000029130.6|ring finger protein 32 	ENSMUST00000001247.5|Rnf32|ENSMUSG00000029130.6|ring finger protein 32 	ENSMUST00000161398.1|Rnf32|ENSMUSG00000029130.6|ring finger protein 32 	ENSMUST00000160246.1|Rnf32|ENSMUSG00000029130.6|ring finger protein 32
mm10_v2_chr13_-_97747373_97747384	0.626802	Rfx3_Rfx1_Rfx4	ENSMUST00000123535.1|5330416C01Rik|ENSMUSG00000054944.7|RIKEN cDNA 5330416C01 gene
mm10_v2_chr5_-_92042630_92042701	0.625725	Rfx3_Rfx1_Rfx4	ENSMUST00000113140.1|Cdkl2|ENSMUSG00000029403.8|cyclin-dependent kinase-like 2 (CDC2-related kinase) 	ENSMUST00000113143.1|Cdkl2|ENSMUSG00000029403.8|cyclin-dependent kinase-like 2 (CDC2-related kinase)
mm10_v2_chr5_-_137531204_137531297	0.616709	Rfx3_Rfx1_Rfx4	ENSMUST00000150063.2|Gnb2|ENSMUSG00000029713.9|guanine nucleotide binding protein (G protein), beta 2
mm10_v2_chr17_-_24696147_24696166	0.61418	Rfx3_Rfx1_Rfx4	ENSMUST00000046839.8|Gfer|ENSMUSG00000040888.9|growth factor, erv1 (S. cerevisiae)-like (augmenter of liver regeneration)
mm10_v2_chr8_+_94772009_94772009	0.613741	Rfx3_Rfx1_Rfx4	ENSMUST00000034230.5|Cx3cl1|ENSMUSG00000031778.6|chemokine (C-X3-C motif) ligand 1
mm10_v2_chr6_-_90810118_90810160	0.613364	Rfx3_Rfx1_Rfx4	ENSMUST00000101151.3|Iqsec1|ENSMUSG00000034312.7|IQ motif and Sec7 domain 1
mm10_v2_chr7_-_140082489_140082556	0.611211	Rfx3_Rfx1_Rfx4	ENSMUST00000026541.7|Caly|ENSMUSG00000025468.8|calcyon neuron-specific vesicular protein
mm10_v2_chr5_-_149636331_149636376	0.606118	Rfx3_Rfx1_Rfx4	ENSMUST00000074846.7|Hsph1|ENSMUSG00000029657.9|heat shock 105kDa/110kDa protein 1 	ENSMUST00000110498.1|Hsph1|ENSMUSG00000029657.9|heat shock 105kDa/110kDa protein 1 	ENSMUST00000127977.1|Hsph1|ENSMUSG00000029657.9|heat shock 105kDa/110kDa protein 1 	ENSMUST00000132412.1|Hsph1|ENSMUSG00000029657.9|heat shock 105kDa/110kDa protein 1
mm10_v2_chr7_+_3390629_3390707	0.604138	Rfx3_Rfx1_Rfx4	ENSMUST00000182222.1|Cacng8|ENSMUSG00000053395.9|calcium channel, voltage-dependent, gamma subunit 8
mm10_v2_chr7_-_140082246_140082301	0.586383	Rfx3_Rfx1_Rfx4	ENSMUST00000166758.2|Caly|ENSMUSG00000025468.8|calcyon neuron-specific vesicular protein
mm10_v2_chr17_+_71183545_71183570	0.586372	Rfx3_Rfx1_Rfx4	ENSMUST00000156570.1|Lpin2|ENSMUSG00000024052.11|lipin 2
mm10_v2_chr5_-_115300912_115300944	0.57884	Rfx3_Rfx1_Rfx4	ENSMUST00000112090.1|Dynll1|ENSMUSG00000009013.4|dynein light chain LC8-type 1
mm10_v2_chr5_-_115300957_115300999	0.565519	Rfx3_Rfx1_Rfx4	ENSMUST00000009157.3|Dynll1|ENSMUSG00000009013.4|dynein light chain LC8-type 1
mm10_v2_chr2_-_75981967_75981967	0.565248	Rfx3_Rfx1_Rfx4	ENSMUST00000099994.3|Ttc30a1|ENSMUSG00000075271.3|tetratricopeptide repeat domain 30A1
mm10_v2_chr18_-_46198810_46198824	0.564401	Rfx3_Rfx1_Rfx4	ENSMUST00000167364.1|Trim36|ENSMUSG00000033949.5|tripartite motif-containing 36
mm10_v2_chr1_-_60043087_60043175	0.561137	Rfx3_Rfx1_Rfx4	ENSMUST00000027172.6|Ica1l|ENSMUSG00000026018.6|islet cell autoantigen 1-like
mm10_v2_chr9_+_63602650_63602703	0.552663	Rfx3_Rfx1_Rfx4	ENSMUST00000041551.7|Aagab|ENSMUSG00000037257.7|alpha- and gamma-adaptin binding protein
mm10_v2_chr16_+_78301673_78301760	0.549111	Rfx3_Rfx1_Rfx4	ENSMUST00000114229.2|Cxadr|ENSMUSG00000022865.7|coxsackie virus and adenovirus receptor
mm10_v2_chr2_-_145935014_145935014	0.538142	Rfx3_Rfx1_Rfx4	ENSMUST00000001818.4|Crnkl1|ENSMUSG00000001767.5|Crn, crooked neck-like 1 (Drosophila)
mm10_v2_chr9_-_60688118_60688184	0.534247	Rfx3_Rfx1_Rfx4	ENSMUST00000114034.2|Lrrc49|ENSMUSG00000047766.9|leucine rich repeat containing 49 	ENSMUST00000065603.5|Lrrc49|ENSMUSG00000047766.9|leucine rich repeat containing 49
mm10_v2_chr16_-_3909192_3909192	0.521587	Rfx3_Rfx1_Rfx4	ENSMUST00000181699.1|1700016D08Rik|ENSMUSG00000097179.1|RIKEN cDNA 1700016D08 gene
mm10_v2_chr15_+_100761741_100761797	0.513218	Rfx3_Rfx1_Rfx4	ENSMUST00000023776.6|Slc4a8|ENSMUSG00000023032.6|solute carrier family 4 (anion exchanger), member 8
mm10_v2_chr2_+_21205719_21205787	0.506111	Rfx3_Rfx1_Rfx4	ENSMUST00000054591.3|Thnsl1|ENSMUSG00000048550.11|threonine synthase-like 1 (bacterial) 	ENSMUST00000102952.1|Thnsl1|ENSMUSG00000048550.11|threonine synthase-like 1 (bacterial) 	ENSMUST00000138965.1|Thnsl1|ENSMUSG00000048550.11|threonine synthase-like 1 (bacterial) 	ENSMUST00000138914.1|Thnsl1|ENSMUSG00000048550.11|threonine synthase-like 1 (bacterial) 	ENSMUST00000102951.1|Thnsl1|ENSMUSG00000048550.11|threonine synthase-like 1 (bacterial)
mm10_v2_chr11_-_89302545_89302567	0.505283	Rfx3_Rfx1_Rfx4	ENSMUST00000061728.3|Nog|ENSMUSG00000048616.3|noggin
mm10_v2_chr5_-_137046026_137046135	0.502871	Rfx3_Rfx1_Rfx4	ENSMUST00000144303.1|Ap1s1|ENSMUSG00000004849.8|adaptor protein complex AP-1, sigma 1 	ENSMUST00000111080.1|Ap1s1|ENSMUSG00000004849.8|adaptor protein complex AP-1, sigma 1
mm10_v2_chr10_+_42860648_42860676	0.499322	Rfx3_Rfx1_Rfx4	ENSMUST00000105495.1|Scml4|ENSMUSG00000044770.8|sex comb on midleg-like 4 (Drosophila)
mm10_v2_chr1_-_152766323_152766352	0.48178	Rfx3_Rfx1_Rfx4	ENSMUST00000111857.1|Rgl1|ENSMUSG00000026482.7|ral guanine nucleotide dissociation stimulator,-like 1
mm10_v2_chr12_-_83439910_83439934	0.480367	Rfx3_Rfx1_Rfx4	ENSMUST00000177801.1|Dpf3|ENSMUSG00000021221.9|D4, zinc and double PHD fingers, family 3
mm10_v2_chr6_+_88084473_88084527	0.479756	Rfx3_Rfx1_Rfx4	ENSMUST00000032143.6|Rpn1|ENSMUSG00000030062.6|ribophorin I
mm10_v2_chr8_-_22805596_22805654	0.477361	Rfx3_Rfx1_Rfx4	ENSMUST00000163739.1|Ap3m2|ENSMUSG00000031539.5|adaptor-related protein complex 3, mu 2 subunit
mm10_v2_chr5_+_124598749_124598798	0.475382	Rfx3_Rfx1_Rfx4	ENSMUST00000130912.1|Tctn2|ENSMUSG00000029386.9|tectonic family member 2 	ENSMUST00000100706.3|Tctn2|ENSMUSG00000029386.9|tectonic family member 2
mm10_v2_chr1_-_155417394_155417435	0.472656	Rfx3_Rfx1_Rfx4	ENSMUST00000111775.1|Xpr1|ENSMUSG00000026469.8|xenotropic and polytropic retrovirus receptor 1 	ENSMUST00000111774.1|Xpr1|ENSMUSG00000026469.8|xenotropic and polytropic retrovirus receptor 1
mm10_v2_chr7_-_45830776_45830944	0.472317	Rfx3_Rfx1_Rfx4	ENSMUST00000107723.2|Grwd1|ENSMUSG00000053801.10|glutamate-rich WD repeat containing 1 	ENSMUST00000131384.1|Grwd1|ENSMUSG00000053801.10|glutamate-rich WD repeat containing 1
mm10_v2_chr11_+_83302641_83302803	0.467018	Rfx3_Rfx1_Rfx4	ENSMUST00000176430.1|Ap2b1|ENSMUSG00000035152.8|adaptor-related protein complex 2, beta 1 subunit 	ENSMUST00000065692.7|Ap2b1|ENSMUSG00000035152.8|adaptor-related protein complex 2, beta 1 subunit
mm10_v2_chr10_+_39133981_39134031	0.4654	Rfx3_Rfx1_Rfx4	ENSMUST00000019991.7|Tube1|ENSMUSG00000019845.7|epsilon-tubulin 1
mm10_v2_chr2_+_164823001_164823040	0.462606	Rfx3_Rfx1_Rfx4	ENSMUST00000132282.1|Zswim1|ENSMUSG00000017764.2|zinc finger SWIM-type containing 1
mm10_v2_chr12_+_72536342_72536396	0.457672	Rfx3_Rfx1_Rfx4	ENSMUST00000044352.6|Pcnxl4|ENSMUSG00000034501.6|pecanex-like 4 (Drosophila)
mm10_v2_chr14_+_48446128_48446276	0.452807	Rfx3_Rfx1_Rfx4	ENSMUST00000124720.1|Tmem260|ENSMUSG00000036339.11|transmembrane protein 260
mm10_v2_chr11_+_101552188_101552234	0.447085	Rfx3_Rfx1_Rfx4	ENSMUST00000147239.1|Nbr1|ENSMUSG00000017119.13|neighbor of Brca1 gene 1
mm10_v2_chr5_-_142550965_142551110	0.446915	Rfx3_Rfx1_Rfx4	ENSMUST00000129212.1|Radil|ENSMUSG00000029576.11|Ras association and DIL domains 	ENSMUST00000110785.1|Radil|ENSMUSG00000029576.11|Ras association and DIL domains 	ENSMUST00000063635.8|Radil|ENSMUSG00000029576.11|Ras association and DIL domains
mm10_v2_chr11_+_83302817_83302952	0.446492	Rfx3_Rfx1_Rfx4	ENSMUST00000142680.1|Ap2b1|ENSMUSG00000035152.8|adaptor-related protein complex 2, beta 1 subunit
mm10_v2_chr5_+_21424934_21425013	0.442313	Rfx3_Rfx1_Rfx4	ENSMUST00000056045.4|Fam185a|ENSMUSG00000047221.5|family with sequence similarity 185, member A
mm10_v2_chr9_+_59589288_59589353	0.438253	Rfx3_Rfx1_Rfx4	ENSMUST00000121266.1|Celf6|ENSMUSG00000032297.5|CUGBP, Elav-like family member 6 	ENSMUST00000118164.1|Celf6|ENSMUSG00000032297.5|CUGBP, Elav-like family member 6
mm10_v2_chr3_-_127225917_127225959	0.436587	Rfx3_Rfx1_Rfx4	ENSMUST00000182064.1|Ank2|ENSMUSG00000032826.10|ankyrin 2, brain 	ENSMUST00000182662.1|Ank2|ENSMUSG00000032826.10|ankyrin 2, brain
mm10_v2_chr8_-_111933761_111933816	0.432354	Rfx3_Rfx1_Rfx4	ENSMUST00000034429.7|Tmem231|ENSMUSG00000031951.7|transmembrane protein 231
mm10_v2_chr4_+_99829437_99829500	0.429406	Rfx3_Rfx1_Rfx4	ENSMUST00000124547.1|Efcab7|ENSMUSG00000073791.5|EF-hand calcium binding domain 7 	ENSMUST00000106994.1|Efcab7|ENSMUSG00000073791.5|EF-hand calcium binding domain 7
mm10_v2_chr11_-_87359011_87359081	0.42868	Rfx3_Rfx1_Rfx4	ENSMUST00000055438.4|Ppm1e|ENSMUSG00000046442.4|protein phosphatase 1E (PP2C domain containing)
mm10_v2_chr2_-_106003549_106003549	0.423419	Rfx3_Rfx1_Rfx4	ENSMUST00000102555.4|Dnajc24|ENSMUSG00000027166.8|DnaJ (Hsp40) homolog, subfamily C, member 24
mm10_v2_chr3_+_29082539_29082771	0.416166	Rfx3_Rfx1_Rfx4	ENSMUST00000119598.1|Egfem1|ENSMUSG00000063600.8|EGF-like and EMI domain containing 1 	ENSMUST00000118531.1|Egfem1|ENSMUSG00000063600.8|EGF-like and EMI domain containing 1
mm10_v2_chr15_-_98093245_98093260	0.413381	Rfx3_Rfx1_Rfx4	ENSMUST00000180657.1|Senp1|ENSMUSG00000033075.11|SUMO1/sentrin specific peptidase 1
mm10_v2_chr5_-_148928619_148928659	0.412161	Rfx3_Rfx1_Rfx4	ENSMUST00000149169.1|Katnal1|ENSMUSG00000041298.9|katanin p60 subunit A-like 1 	ENSMUST00000047257.8|Katnal1|ENSMUSG00000041298.9|katanin p60 subunit A-like 1
mm10_v2_chr1_-_152766281_152766319	0.411087	Rfx3_Rfx1_Rfx4	ENSMUST00000111859.1|Rgl1|ENSMUSG00000026482.7|ral guanine nucleotide dissociation stimulator,-like 1 	ENSMUST00000148865.1|Rgl1|ENSMUSG00000026482.7|ral guanine nucleotide dissociation stimulator,-like 1
mm10_v2_chr6_+_38381469_38381528	0.409053	Rfx3_Rfx1_Rfx4	ENSMUST00000162554.1|Ttc26|ENSMUSG00000056832.8|tetratricopeptide repeat domain 26 	ENSMUST00000161751.1|Ttc26|ENSMUSG00000056832.8|tetratricopeptide repeat domain 26
mm10_v2_chr2_-_75978164_75978206	0.402455	Rfx3_Rfx1_Rfx4	ENSMUST00000099995.3|Ttc30a2|ENSMUSG00000075272.3|tetratricopeptide repeat domain 30A2
mm10_v2_chr3_-_126998408_126998463	0.399698	Rfx3_Rfx1_Rfx4	ENSMUST00000182764.1|Ank2|ENSMUSG00000032826.10|ankyrin 2, brain 	ENSMUST00000044443.8|Ank2|ENSMUSG00000032826.10|ankyrin 2, brain
mm10_v2_chr4_-_103114238_103114299	0.399599	Rfx3_Rfx1_Rfx4	ENSMUST00000036451.8|Wdr78|ENSMUSG00000035126.13|WD repeat domain 78 	ENSMUST00000036557.8|Wdr78|ENSMUSG00000035126.13|WD repeat domain 78
mm10_v2_chr1_-_59237093_59237256	0.398039	Rfx3_Rfx1_Rfx4	ENSMUST00000163058.1|Als2|ENSMUSG00000026024.8|amyotrophic lateral sclerosis 2 (juvenile) 	ENSMUST00000027178.6|Als2|ENSMUSG00000026024.8|amyotrophic lateral sclerosis 2 (juvenile)
mm10_v2_chr4_-_117125618_117125683	0.397119	Rfx3_Rfx1_Rfx4	ENSMUST00000183310.1|Btbd19|ENSMUSG00000073771.5|BTB (POZ) domain containing 19
mm10_v2_chr15_-_68258787_68258880	0.396559	Rfx3_Rfx1_Rfx4	ENSMUST00000162173.1|Zfat|ENSMUSG00000022335.10|zinc finger and AT hook domain containing 	ENSMUST00000160248.1|Zfat|ENSMUSG00000022335.10|zinc finger and AT hook domain containing 	ENSMUST00000159430.1|Zfat|ENSMUSG00000022335.10|zinc finger and AT hook domain containing 	ENSMUST00000162054.1|Zfat|ENSMUSG00000022335.10|zinc finger and AT hook domain containing
mm10_v2_chr17_+_34604262_34604304	0.392083	Rfx3_Rfx1_Rfx4	ENSMUST00000174041.1|Agpat1|ENSMUSG00000034254.11|1-acylglycerol-3-phosphate O-acyltransferase 1 (lysophosphatidic acid acyltransferase, alpha)
mm10_v2_chr3_-_127225847_127225915	0.386005	Rfx3_Rfx1_Rfx4	ENSMUST00000182726.1|Ank2|ENSMUSG00000032826.10|ankyrin 2, brain 	ENSMUST00000182779.1|Ank2|ENSMUSG00000032826.10|ankyrin 2, brain
mm10_v2_chr17_+_27685197_27685233	0.384432	Rfx3_Rfx1_Rfx4	ENSMUST00000097360.2|Pacsin1|ENSMUSG00000040276.8|protein kinase C and casein kinase substrate in neurons 1
mm10_v2_chr2_+_29788237_29788302	0.381088	Rfx3_Rfx1_Rfx4	ENSMUST00000028137.3|Coq4|ENSMUSG00000026798.4|coenzyme Q4 homolog (yeast) 	ENSMUST00000148791.1|Coq4|ENSMUSG00000026798.4|coenzyme Q4 homolog (yeast)
mm10_v2_chr17_+_84626458_84626512	0.380096	Rfx3_Rfx1_Rfx4	ENSMUST00000025101.8|Dync2li1|ENSMUSG00000024253.8|dynein cytoplasmic 2 light intermediate chain 1
mm10_v2_chr15_-_98953541_98953560	0.375439	Rfx3_Rfx1_Rfx4	ENSMUST00000097014.5|Tuba1a|ENSMUSG00000072235.5|tubulin, alpha 1A
mm10_v2_chr10_+_34297421_34297513	0.375115	Rfx3_Rfx1_Rfx4	ENSMUST00000047935.6|Tspyl4|ENSMUSG00000039485.6|TSPY-like 4
mm10_v2_chr2_-_118703963_118703963	0.373622	Rfx3_Rfx1_Rfx4	ENSMUST00000104937.1|Ankrd63|ENSMUSG00000078137.1|ankyrin repeat domain 63
mm10_v2_chr10_+_80299084_80299126	0.36861	Rfx3_Rfx1_Rfx4	ENSMUST00000154212.1|Apc2|ENSMUSG00000020135.7|adenomatosis polyposis coli 2
mm10_v2_chr2_-_134644019_134644042	0.366733	Rfx3_Rfx1_Rfx4	ENSMUST00000110120.1|Tmx4|ENSMUSG00000034723.5|thioredoxin-related transmembrane protein 4
mm10_v2_chr6_+_115853470_115853598	0.364152	Rfx3_Rfx1_Rfx4	ENSMUST00000112925.1|Ift122|ENSMUSG00000030323.7|intraflagellar transport 122 	ENSMUST00000112923.1|Ift122|ENSMUSG00000030323.7|intraflagellar transport 122 	ENSMUST00000038234.6|Ift122|ENSMUSG00000030323.7|intraflagellar transport 122
mm10_v2_chr18_-_77047282_77047313	0.363805	Rfx3_Rfx1_Rfx4	ENSMUST00000154665.1|Katnal2|ENSMUSG00000025420.7|katanin p60 subunit A-like 2 	ENSMUST00000026486.6|Katnal2|ENSMUSG00000025420.7|katanin p60 subunit A-like 2 	ENSMUST00000123650.1|Katnal2|ENSMUSG00000025420.7|katanin p60 subunit A-like 2 	ENSMUST00000126153.1|Katnal2|ENSMUSG00000025420.7|katanin p60 subunit A-like 2
mm10_v2_chr3_+_98382538_98382553	0.362924	Rfx3_Rfx1_Rfx4	ENSMUST00000178372.1|Zfp697|ENSMUSG00000050064.8|zinc finger protein 697
mm10_v2_chr13_-_92483996_92484037	0.361314	Rfx3_Rfx1_Rfx4	ENSMUST00000040106.7|Fam151b|ENSMUSG00000034334.7|family with sequence similarity 151, member B
mm10_v2_chr7_-_25250720_25250761	0.358648	Rfx3_Rfx1_Rfx4	ENSMUST00000116343.2|Erf|ENSMUSG00000040857.9|Ets2 repressor factor 	ENSMUST00000045847.8|Erf|ENSMUSG00000040857.9|Ets2 repressor factor
mm10_v2_chr18_+_23803962_23804054	0.356224	Rfx3_Rfx1_Rfx4	ENSMUST00000025127.3|Mapre2|ENSMUSG00000024277.8|microtubule-associated protein, RP/EB family, member 2
mm10_v2_chr17_+_12119274_12119348	0.354885	Rfx3_Rfx1_Rfx4	ENSMUST00000024594.2|Agpat4|ENSMUSG00000023827.2|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)
mm10_v2_chr3_+_98382438_98382520	0.354871	Rfx3_Rfx1_Rfx4	ENSMUST00000056096.8|Zfp697|ENSMUSG00000050064.8|zinc finger protein 697
mm10_v2_chr7_+_3303643_3303654	0.353245	Rfx3_Rfx1_Rfx4	ENSMUST00000172109.1|Prkcg|ENSMUSG00000078816.3|protein kinase C, gamma
mm10_v2_chr17_-_84466186_84466245	0.351393	Rfx3_Rfx1_Rfx4	ENSMUST00000047524.8|Thada|ENSMUSG00000024251.9|thyroid adenoma associated
mm10_v2_chr4_+_138434647_138434748	0.351088	Rfx3_Rfx1_Rfx4	ENSMUST00000044058.4|Mul1|ENSMUSG00000041241.6|mitochondrial ubiquitin ligase activator of NFKB 1 	ENSMUST00000105813.1|Mul1|ENSMUSG00000041241.6|mitochondrial ubiquitin ligase activator of NFKB 1 	ENSMUST00000105815.1|Mul1|ENSMUSG00000041241.6|mitochondrial ubiquitin ligase activator of NFKB 1
mm10_v2_chr3_+_82358056_82358075	0.348985	Rfx3_Rfx1_Rfx4	ENSMUST00000091014.4|Map9|ENSMUSG00000033900.8|microtubule-associated protein 9
mm10_v2_chr5_-_137530990_137531049	0.348365	Rfx3_Rfx1_Rfx4	ENSMUST00000132525.1|Gnb2|ENSMUSG00000029713.9|guanine nucleotide binding protein (G protein), beta 2
mm10_v2_chr15_-_79062866_79062941	0.339042	Rfx3_Rfx1_Rfx4	ENSMUST00000151889.1|Ankrd54|ENSMUSG00000033055.4|ankyrin repeat domain 54 	ENSMUST00000040676.4|Ankrd54|ENSMUSG00000033055.4|ankyrin repeat domain 54
mm10_v2_chr18_+_52465676_52465710	0.33882	Rfx3_Rfx1_Rfx4	ENSMUST00000025406.7|Srfbp1|ENSMUSG00000024528.7|serum response factor binding protein 1
mm10_v2_chr2_-_121271315_121271322	0.338297	Rfx3_Rfx1_Rfx4	ENSMUST00000131245.1|Trp53bp1|ENSMUSG00000043909.10|transformation related protein 53 binding protein 1
mm10_v2_chr9_-_110476637_110476694	0.336288	Rfx3_Rfx1_Rfx4	ENSMUST00000111934.1|Klhl18|ENSMUSG00000054792.9|kelch-like 18 	ENSMUST00000068025.6|Klhl18|ENSMUSG00000054792.9|kelch-like 18
mm10_v2_chr11_+_98863610_98863646	0.328683	Rfx3_Rfx1_Rfx4	ENSMUST00000142414.1|Wipf2|ENSMUSG00000038013.8|WAS/WASL interacting protein family, member 2 	ENSMUST00000037480.8|Wipf2|ENSMUSG00000038013.8|WAS/WASL interacting protein family, member 2
mm10_v2_chr19_-_41896132_41896155	0.325588	Rfx3_Rfx1_Rfx4	ENSMUST00000038677.3|Rrp12|ENSMUSG00000035049.3|ribosomal RNA processing 12 homolog (S. cerevisiae)
mm10_v2_chr1_-_172329261_172329307	0.324912	Rfx3_Rfx1_Rfx4	ENSMUST00000062387.2|Kcnj9|ENSMUSG00000038026.7|potassium inwardly-rectifying channel, subfamily J, member 9
mm10_v2_chr11_-_59839745_59839763	0.323324	Rfx3_Rfx1_Rfx4	ENSMUST00000141415.1|Cops3|ENSMUSG00000019373.5|COP9 (constitutive photomorphogenic) homolog, subunit 3 (Arabidopsis thaliana)
mm10_v2_chr18_+_48045329_48045348	0.320347	Rfx3_Rfx1_Rfx4	ENSMUST00000076155.4|Gm5506|ENSMUSG00000059040.4|predicted gene 5506
mm10_v2_chr15_-_98762992_98763190	0.319695	Rfx3_Rfx1_Rfx4	ENSMUST00000156572.1|Arf3|ENSMUSG00000051853.8|ADP-ribosylation factor 3
mm10_v2_chr2_-_38287174_38287195	0.319457	Rfx3_Rfx1_Rfx4	ENSMUST00000130472.1|Dennd1a|ENSMUSG00000035392.11|DENN/MADD domain containing 1A
mm10_v2_chr1_-_87510306_87510373	0.318125	Rfx3_Rfx1_Rfx4	ENSMUST00000027477.8|Ngef|ENSMUSG00000026259.8|neuronal guanine nucleotide exchange factor
mm10_v2_chr19_+_6276725_6276792	0.317614	Rfx3_Rfx1_Rfx4	ENSMUST00000025684.3|Ehd1|ENSMUSG00000024772.9|EH-domain containing 1
mm10_v2_chr2_+_126152141_126152212	0.316856	Rfx3_Rfx1_Rfx4	ENSMUST00000170908.1|Dtwd1|ENSMUSG00000023330.6|DTW domain containing 1
mm10_v2_chr9_-_70141484_70141578	0.315642	Rfx3_Rfx1_Rfx4	ENSMUST00000034749.8|Fam81a|ENSMUSG00000032224.8|family with sequence similarity 81, member A
mm10_v2_chrX_+_72918557_72918612	0.314005	Rfx3_Rfx1_Rfx4	ENSMUST00000033715.4|Nsdhl|ENSMUSG00000031349.4|NAD(P) dependent steroid dehydrogenase-like
mm10_v2_chr8_-_27202542_27202557	0.313545	Rfx3_Rfx1_Rfx4	ENSMUST00000038174.6|Got1l1|ENSMUSG00000039720.6|glutamic-oxaloacetic transaminase 1-like 1
mm10_v2_chr16_+_35770382_35770396	0.309358	Rfx3_Rfx1_Rfx4	ENSMUST00000023555.4|Hspbap1|ENSMUSG00000022849.4|Hspb associated protein 1
mm10_v2_chr11_+_43474276_43474340	0.306528	Rfx3_Rfx1_Rfx4	ENSMUST00000173002.1|C1qtnf2|ENSMUSG00000046491.4|C1q and tumor necrosis factor related protein 2 	ENSMUST00000057679.3|C1qtnf2|ENSMUSG00000046491.4|C1q and tumor necrosis factor related protein 2
mm10_v2_chr4_-_103114555_103114578	0.3057	Rfx3_Rfx1_Rfx4	ENSMUST00000106868.3|Wdr78|ENSMUSG00000035126.13|WD repeat domain 78
mm10_v2_chr3_-_84305385_84305456	0.305686	Rfx3_Rfx1_Rfx4	ENSMUST00000122849.1|Trim2|ENSMUSG00000027993.10|tripartite motif-containing 2 	ENSMUST00000132283.1|Trim2|ENSMUSG00000027993.10|tripartite motif-containing 2
mm10_v2_chr6_+_56017489_56017517	0.304648	Rfx3_Rfx1_Rfx4	ENSMUST00000052827.4|Ppp1r17|ENSMUSG00000002930.5|protein phosphatase 1, regulatory subunit 17
mm10_v2_chr5_+_130187158_130187166	0.304629	Rfx3_Rfx1_Rfx4	ENSMUST00000119027.1|Rabgef1|ENSMUSG00000025340.8|RAB guanine nucleotide exchange factor (GEF) 1 	ENSMUST00000026390.7|Rabgef1|ENSMUSG00000025340.8|RAB guanine nucleotide exchange factor (GEF) 1
mm10_v2_chr2_-_91444622_91444726	0.303844	Rfx3_Rfx1_Rfx4	ENSMUST00000064652.7|1110051M20Rik|ENSMUSG00000040591.12|RIKEN cDNA 1110051M20 gene 	ENSMUST00000102594.4|1110051M20Rik|ENSMUSG00000040591.12|RIKEN cDNA 1110051M20 gene 	ENSMUST00000094835.2|1110051M20Rik|ENSMUSG00000040591.12|RIKEN cDNA 1110051M20 gene
mm10_v2_chr18_-_12305638_12305720	0.301272	Rfx3_Rfx1_Rfx4	ENSMUST00000122408.1|Ankrd29|ENSMUSG00000057766.7|ankyrin repeat domain 29 	ENSMUST00000118525.1|Ankrd29|ENSMUSG00000057766.7|ankyrin repeat domain 29 	ENSMUST00000142066.1|Ankrd29|ENSMUSG00000057766.7|ankyrin repeat domain 29
mm10_v2_chr9_-_8042785_8042882	0.300959	Rfx3_Rfx1_Rfx4	ENSMUST00000065291.1|9230110C19Rik|ENSMUSG00000053070.4|RIKEN cDNA 9230110C19 gene
mm10_v2_chr12_+_52699297_52699411	0.298944	Rfx3_Rfx1_Rfx4	ENSMUST00000095737.3|Akap6|ENSMUSG00000061603.7|A kinase (PRKA) anchor protein 6
mm10_v2_chr11_+_101425068_101425114	0.296021	Rfx3_Rfx1_Rfx4	ENSMUST00000040561.5|Rundc1|ENSMUSG00000035007.5|RUN domain containing 1
mm10_v2_chr12_-_72070991_72071079	0.29517	Rfx3_Rfx1_Rfx4	ENSMUST00000050649.4|Gpr135|ENSMUSG00000043398.4|G protein-coupled receptor 135
mm10_v2_chr17_-_80290476_80290476	0.295059	Rfx3_Rfx1_Rfx4	ENSMUST00000086555.3|Dhx57|ENSMUSG00000035051.8|DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57 	ENSMUST00000038166.7|Dhx57|ENSMUSG00000035051.8|DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57
mm10_v2_chr3_+_13946368_13946379	0.294034	Rfx3_Rfx1_Rfx4	ENSMUST00000171075.1|Ralyl|ENSMUSG00000039717.9|RALY RNA binding protein-like 	ENSMUST00000108372.2|Ralyl|ENSMUSG00000039717.9|RALY RNA binding protein-like
mm10_v2_chr1_+_187215501_187215547	0.293297	Rfx3_Rfx1_Rfx4	ENSMUST00000097443.3|Gpatch2|ENSMUSG00000039210.10|G patch domain containing 2 	ENSMUST00000065573.7|Gpatch2|ENSMUSG00000039210.10|G patch domain containing 2 	ENSMUST00000110943.2|Gpatch2|ENSMUSG00000039210.10|G patch domain containing 2 	ENSMUST00000044812.5|Gpatch2|ENSMUSG00000039210.10|G patch domain containing 2
mm10_v2_chr19_-_10556198_10556275	0.29259	Rfx3_Rfx1_Rfx4	ENSMUST00000025569.2|Tmem216|ENSMUSG00000024667.5|transmembrane protein 216
mm10_v2_chr16_+_36041184_36041197	0.291786	Rfx3_Rfx1_Rfx4	ENSMUST00000042203.8|Wdr5b|ENSMUSG00000034379.8|WD repeat domain 5B
mm10_v2_chr9_+_65460926_65460983	0.289995	Rfx3_Rfx1_Rfx4	ENSMUST00000034955.6|Spg21|ENSMUSG00000032388.6|spastic paraplegia 21 homolog (human)
mm10_v2_chr16_+_43889936_43889947	0.286017	Rfx3_Rfx1_Rfx4	ENSMUST00000151183.1|2610015P09Rik|ENSMUSG00000022701.11|RIKEN cDNA 2610015P09 gene
mm10_v2_chr6_+_119479668_119479795	0.285629	Rfx3_Rfx1_Rfx4	ENSMUST00000032094.5|Fbxl14|ENSMUSG00000030019.5|F-box and leucine-rich repeat protein 14
mm10_v2_chr9_-_50739365_50739517	0.28377	Rfx3_Rfx1_Rfx4	ENSMUST00000117093.1|Dixdc1|ENSMUSG00000032064.11|DIX domain containing 1 	ENSMUST00000121634.1|Dixdc1|ENSMUSG00000032064.11|DIX domain containing 1
mm10_v2_chr11_+_69070790_69070856	0.28355	Rfx3_Rfx1_Rfx4	ENSMUST00000075980.5|Tmem107|ENSMUSG00000020895.8|transmembrane protein 107 	ENSMUST00000094081.4|Tmem107|ENSMUSG00000020895.8|transmembrane protein 107
mm10_v2_chr16_+_32099781_32099857	0.281695	Rfx3_Rfx1_Rfx4	ENSMUST00000115168.2|Cep19|ENSMUSG00000035790.9|centrosomal protein 19
mm10_v2_chr17_+_85090647_85090726	0.280562	Rfx3_Rfx1_Rfx4	ENSMUST00000095188.5|Camkmt|ENSMUSG00000071037.5|calmodulin-lysine N-methyltransferase
mm10_v2_chr15_+_89532816_89532890	0.279671	Rfx3_Rfx1_Rfx4	ENSMUST00000167173.1|Shank3|ENSMUSG00000022623.9|SH3/ankyrin domain gene 3
mm10_v2_chr7_-_118856254_118856373	0.276495	Rfx3_Rfx1_Rfx4	ENSMUST00000033277.7|Knop1|ENSMUSG00000030980.10|lysine rich nucleolar protein 1
mm10_v2_chr10_-_13868779_13868874	0.275981	Rfx3_Rfx1_Rfx4	ENSMUST00000105534.3|Aig1|ENSMUSG00000019806.7|androgen-induced 1
mm10_v2_chr7_-_121981669_121981711	0.275823	Rfx3_Rfx1_Rfx4	ENSMUST00000057576.7|Cog7|ENSMUSG00000034951.9|component of oligomeric golgi complex 7
mm10_v2_chr6_+_55203381_55203459	0.275822	Rfx3_Rfx1_Rfx4	ENSMUST00000053094.7|Fam188b|ENSMUSG00000038022.9|family with sequence similarity 188, member B
mm10_v2_chr7_-_68749170_68749241	0.275212	Rfx3_Rfx1_Rfx4	ENSMUST00000118110.1|Arrdc4|ENSMUSG00000042659.8|arrestin domain containing 4 	ENSMUST00000048068.7|Arrdc4|ENSMUSG00000042659.8|arrestin domain containing 4
mm10_v2_chr15_-_84557776_84557875	0.272728	Rfx3_Rfx1_Rfx4	ENSMUST00000069476.4|Ldoc1l|ENSMUSG00000055745.4|leucine zipper, down-regulated in cancer 1-like
mm10_v2_chr11_-_72207413_72207488	0.272647	Rfx3_Rfx1_Rfx4	ENSMUST00000108505.1|4933427D14Rik|ENSMUSG00000020807.8|RIKEN cDNA 4933427D14 gene
mm10_v2_chr1_+_185454803_185454848	0.272441	Rfx3_Rfx1_Rfx4	ENSMUST00000061093.6|Slc30a10|ENSMUSG00000026614.6|solute carrier family 30, member 10
mm10_v2_chr9_-_60687459_60687672	0.271579	Rfx3_Rfx1_Rfx4	ENSMUST00000114032.1|Lrrc49|ENSMUSG00000047766.9|leucine rich repeat containing 49 	ENSMUST00000166168.1|Lrrc49|ENSMUSG00000047766.9|leucine rich repeat containing 49 	ENSMUST00000132366.1|Lrrc49|ENSMUSG00000047766.9|leucine rich repeat containing 49
mm10_v2_chr4_-_153482768_153482811	0.270422	Rfx3_Rfx1_Rfx4	ENSMUST00000105646.2|Ajap1|ENSMUSG00000039546.9|adherens junction associated protein 1
mm10_v2_chr4_-_117872520_117872560	0.270242	Rfx3_Rfx1_Rfx4	ENSMUST00000171052.1|Ccdc24|ENSMUSG00000078588.4|coiled-coil domain containing 24 	ENSMUST00000166325.1|Ccdc24|ENSMUSG00000078588.4|coiled-coil domain containing 24 	ENSMUST00000106422.2|Ccdc24|ENSMUSG00000078588.4|coiled-coil domain containing 24
mm10_v2_chr2_+_31152316_31152360	0.26871	Rfx3_Rfx1_Rfx4	ENSMUST00000056433.6|Gpr107|ENSMUSG00000000194.7|G protein-coupled receptor 107
mm10_v2_chr11_+_4160348_4160404	0.267763	Rfx3_Rfx1_Rfx4	ENSMUST00000002198.3|Sf3a1|ENSMUSG00000002129.5|splicing factor 3a, subunit 1
mm10_v2_chr14_+_32085804_32085877	0.265484	Rfx3_Rfx1_Rfx4	ENSMUST00000170600.1|Oxnad1|ENSMUSG00000021906.7|oxidoreductase NAD-binding domain containing 1 	ENSMUST00000168986.1|Oxnad1|ENSMUSG00000021906.7|oxidoreductase NAD-binding domain containing 1 	ENSMUST00000169649.1|Oxnad1|ENSMUSG00000021906.7|oxidoreductase NAD-binding domain containing 1
mm10_v2_chrX_+_153359613_153359613	0.26402	Rfx3_Rfx1_Rfx4	ENSMUST00000039545.4|Klf8|ENSMUSG00000041649.7|Kruppel-like factor 8
mm10_v2_chr11_+_97801917_97801998	0.262493	Rfx3_Rfx1_Rfx4	ENSMUST00000127033.2|Lasp1|ENSMUSG00000038366.9|LIM and SH3 protein 1
mm10_v2_chr12_+_29528382_29528468	0.261864	Rfx3_Rfx1_Rfx4	ENSMUST00000049784.9|Myt1l|ENSMUSG00000061911.8|myelin transcription factor 1-like
mm10_v2_chr10_-_86705485_86705509	0.260821	Rfx3_Rfx1_Rfx4	ENSMUST00000020238.7|Hsp90b1|ENSMUSG00000020048.7|heat shock protein 90, beta (Grp94), member 1
mm10_v2_chr1_-_84696182_84696221	0.260167	Rfx3_Rfx1_Rfx4	ENSMUST00000049126.6|Dner|ENSMUSG00000036766.6|delta/notch-like EGF-related receptor
mm10_v2_chr10_-_13868932_13869004	0.259459	Rfx3_Rfx1_Rfx4	ENSMUST00000019942.5|Aig1|ENSMUSG00000019806.7|androgen-induced 1 	ENSMUST00000162610.1|Aig1|ENSMUSG00000019806.7|androgen-induced 1
mm10_v2_chr11_+_109650574_109650579	0.257919	Rfx3_Rfx1_Rfx4	ENSMUST00000106676.1|Prkar1a|ENSMUSG00000020612.10|protein kinase, cAMP dependent regulatory, type I, alpha
mm10_v2_chr2_-_109280718_109280767	0.2567	Rfx3_Rfx1_Rfx4	ENSMUST00000147770.1|Mettl15|ENSMUSG00000057234.3|methyltransferase like 15
mm10_v2_chr11_-_83302586_83302637	0.256328	Rfx3_Rfx1_Rfx4	ENSMUST00000176374.1|Pex12|ENSMUSG00000018733.4|peroxisomal biogenesis factor 12
mm10_v2_chr19_-_4906598_4906632	0.255035	Rfx3_Rfx1_Rfx4	ENSMUST00000053506.6|Bbs1|ENSMUSG00000006464.8|Bardet-Biedl syndrome 1 (human)
mm10_v2_chr12_-_86726439_86726475	0.254581	Rfx3_Rfx1_Rfx4	ENSMUST00000021682.8|Angel1|ENSMUSG00000021257.8|angel homolog 1 (Drosophila)
mm10_v2_chr11_+_72689997_72690015	0.252791	Rfx3_Rfx1_Rfx4	ENSMUST00000155998.1|Ankfy1|ENSMUSG00000020790.8|ankyrin repeat and FYVE domain containing 1
mm10_v2_chr11_-_76468396_76468473	0.251426	Rfx3_Rfx1_Rfx4	ENSMUST00000065028.7|Abr|ENSMUSG00000017631.12|active BCR-related gene
mm10_v2_chr13_-_106936907_106936952	0.249497	Rfx3_Rfx1_Rfx4	ENSMUST00000080856.7|Ipo11|ENSMUSG00000042590.10|importin 11
mm10_v2_chr7_-_44748306_44748391	0.24945	Rfx3_Rfx1_Rfx4	ENSMUST00000118162.1|Zfp473|ENSMUSG00000048012.12|zinc finger protein 473 	ENSMUST00000140599.2|Zfp473|ENSMUSG00000048012.12|zinc finger protein 473 	ENSMUST00000120798.1|Zfp473|ENSMUSG00000048012.12|zinc finger protein 473
mm10_v2_chr7_-_118705708_118705786	0.248726	Rfx3_Rfx1_Rfx4	ENSMUST00000038791.8|Gde1|ENSMUSG00000033917.8|glycerophosphodiester phosphodiesterase 1
mm10_v2_chr4_+_105790534_105790534	0.246776	Rfx3_Rfx1_Rfx4	ENSMUST00000185012.1|Gm12728|ENSMUSG00000083780.2|predicted gene 12728
mm10_v2_chr3_+_90079540_90079715	0.245609	Rfx3_Rfx1_Rfx4	ENSMUST00000029549.9|Tpm3|ENSMUSG00000027940.12|tropomyosin 3, gamma 	ENSMUST00000118566.1|Tpm3|ENSMUSG00000027940.12|tropomyosin 3, gamma 	ENSMUST00000119158.1|Tpm3|ENSMUSG00000027940.12|tropomyosin 3, gamma
mm10_v2_chr2_+_163017354_163017513	0.245229	Rfx3_Rfx1_Rfx4	ENSMUST00000018002.6|Ift52|ENSMUSG00000017858.6|intraflagellar transport 52 	ENSMUST00000150396.1|Ift52|ENSMUSG00000017858.6|intraflagellar transport 52
mm10_v2_chr1_+_187215737_187215748	0.24502	Rfx3_Rfx1_Rfx4	ENSMUST00000160471.1|Gpatch2|ENSMUSG00000039210.10|G patch domain containing 2
mm10_v2_chr2_+_36136384_36136428	0.244776	Rfx3_Rfx1_Rfx4	ENSMUST00000028250.2|Mrrf|ENSMUSG00000026887.3|mitochondrial ribosome recycling factor
mm10_v2_chr10_-_39133914_39133927	0.244564	Rfx3_Rfx1_Rfx4	ENSMUST00000135785.1|Fam229b|ENSMUSG00000051736.2|family with sequence similarity 229, member B
mm10_v2_chr2_-_52742169_52742281	0.24271	Rfx3_Rfx1_Rfx4	ENSMUST00000102759.1|Stam2|ENSMUSG00000055371.11|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2 	ENSMUST00000127316.1|Stam2|ENSMUSG00000055371.11|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2
mm10_v2_chr2_+_118663235_118663309	0.240996	Rfx3_Rfx1_Rfx4	ENSMUST00000099557.3|Pak6|ENSMUSG00000074923.4|p21 protein (Cdc42/Rac)-activated kinase 6
mm10_v2_chr4_+_10874498_10874607	0.236496	Rfx3_Rfx1_Rfx4	ENSMUST00000080517.7|2610301B20Rik|ENSMUSG00000059482.9|RIKEN cDNA 2610301B20 gene 	ENSMUST00000101504.2|2610301B20Rik|ENSMUSG00000059482.9|RIKEN cDNA 2610301B20 gene
mm10_v2_chr1_+_75521521_75521602	0.235582	Rfx3_Rfx1_Rfx4	ENSMUST00000027414.9|Stk11ip|ENSMUSG00000026213.9|serine/threonine kinase 11 interacting protein 	ENSMUST00000113553.1|Stk11ip|ENSMUSG00000026213.9|serine/threonine kinase 11 interacting protein
mm10_v2_chr7_-_30232186_30232272	0.234313	Rfx3_Rfx1_Rfx4	ENSMUST00000006254.5|Tbcb|ENSMUSG00000006095.6|tubulin folding cofactor B
mm10_v2_chr11_+_61505138_61505210	0.232975	Rfx3_Rfx1_Rfx4	ENSMUST00000102657.3|B9d1|ENSMUSG00000001039.6|B9 protein domain 1
mm10_v2_chr13_-_49309217_49309257	0.228913	Rfx3_Rfx1_Rfx4	ENSMUST00000110087.2|Fgd3|ENSMUSG00000037946.5|FYVE, RhoGEF and PH domain containing 3
mm10_v2_chr7_+_3303503_3303565	0.227152	Rfx3_Rfx1_Rfx4	ENSMUST00000100301.4|Prkcg|ENSMUSG00000078816.3|protein kinase C, gamma
mm10_v2_chr13_-_49320219_49320311	0.225739	Rfx3_Rfx1_Rfx4	ENSMUST00000110086.1|Fgd3|ENSMUSG00000037946.5|FYVE, RhoGEF and PH domain containing 3
mm10_v2_chr1_-_133753681_133753857	0.225038	Rfx3_Rfx1_Rfx4	ENSMUST00000125659.1|Atp2b4|ENSMUSG00000026463.11|ATPase, Ca++ transporting, plasma membrane 4 	ENSMUST00000165602.2|Atp2b4|ENSMUSG00000026463.11|ATPase, Ca++ transporting, plasma membrane 4 	ENSMUST00000048953.7|Atp2b4|ENSMUSG00000026463.11|ATPase, Ca++ transporting, plasma membrane 4
mm10_v2_chr3_-_105960099_105960099	0.224787	Rfx3_Rfx1_Rfx4	ENSMUST00000118209.1|Atp5f1|ENSMUSG00000000563.11|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit B1
mm10_v2_chr12_+_71048338_71048356	0.224489	Rfx3_Rfx1_Rfx4	ENSMUST00000135709.1|Arid4a|ENSMUSG00000048118.11|AT rich interactive domain 4A (RBP1-like)
mm10_v2_chr9_-_64341145_64341257	0.223976	Rfx3_Rfx1_Rfx4	ENSMUST00000120760.1|Dis3l|ENSMUSG00000032396.11|DIS3 mitotic control homolog (S. cerevisiae)-like 	ENSMUST00000168844.2|Dis3l|ENSMUSG00000032396.11|DIS3 mitotic control homolog (S. cerevisiae)-like
mm10_v2_chr8_+_45627946_45627975	0.221038	Rfx3_Rfx1_Rfx4	ENSMUST00000145458.1|Sorbs2|ENSMUSG00000031626.10|sorbin and SH3 domain containing 2
mm10_v2_chr4_-_141790891_141790931	0.218793	Rfx3_Rfx1_Rfx4	ENSMUST00000038014.4|Dnajc16|ENSMUSG00000040697.4|DnaJ (Hsp40) homolog, subfamily C, member 16 	ENSMUST00000153880.1|Dnajc16|ENSMUSG00000040697.4|DnaJ (Hsp40) homolog, subfamily C, member 16
mm10_v2_chr9_+_47530173_47530373	0.218191	Rfx3_Rfx1_Rfx4	ENSMUST00000114548.1|Cadm1|ENSMUSG00000032076.12|cell adhesion molecule 1 	ENSMUST00000152459.1|Cadm1|ENSMUSG00000032076.12|cell adhesion molecule 1 	ENSMUST00000143026.1|Cadm1|ENSMUSG00000032076.12|cell adhesion molecule 1 	ENSMUST00000085909.2|Cadm1|ENSMUSG00000032076.12|cell adhesion molecule 1 	ENSMUST00000114547.1|Cadm1|ENSMUSG00000032076.12|cell adhesion molecule 1 	ENSMUST00000034581.3|Cadm1|ENSMUSG00000032076.12|cell adhesion molecule 1
mm10_v2_chr5_-_136170634_136170661	0.218081	Rfx3_Rfx1_Rfx4	ENSMUST00000041048.1|Orai2|ENSMUSG00000039747.7|ORAI calcium release-activated calcium modulator 2
mm10_v2_chr16_-_4523056_4523075	0.215867	Rfx3_Rfx1_Rfx4	ENSMUST00000090500.3|Srl|ENSMUSG00000022519.7|sarcalumenin 	ENSMUST00000023161.7|Srl|ENSMUSG00000022519.7|sarcalumenin
mm10_v2_chr3_+_103968110_103968446	0.214483	Rfx3_Rfx1_Rfx4	ENSMUST00000117150.1|Phtf1|ENSMUSG00000058388.8|putative homeodomain transcription factor 1 	ENSMUST00000063717.7|Phtf1|ENSMUSG00000058388.8|putative homeodomain transcription factor 1 	ENSMUST00000055425.8|Phtf1|ENSMUSG00000058388.8|putative homeodomain transcription factor 1 	ENSMUST00000123611.1|Phtf1|ENSMUSG00000058388.8|putative homeodomain transcription factor 1 	ENSMUST00000090685.4|Phtf1|ENSMUSG00000058388.8|putative homeodomain transcription factor 1
mm10_v2_chr16_-_64771146_64771184	0.21396	Rfx3_Rfx1_Rfx4	ENSMUST00000076991.6|4930453N24Rik|ENSMUSG00000059920.9|RIKEN cDNA 4930453N24 gene
mm10_v2_chr1_+_59119822_59119861	0.213267	Rfx3_Rfx1_Rfx4	ENSMUST00000180570.1|G730003C15Rik|ENSMUSG00000097573.1|RIKEN cDNA G730003C15 gene
mm10_v2_chr1_+_86154752_86154821	0.212939	Rfx3_Rfx1_Rfx4	ENSMUST00000113309.2|Armc9|ENSMUSG00000062590.7|armadillo repeat containing 9 	ENSMUST00000027434.8|Armc9|ENSMUSG00000062590.7|armadillo repeat containing 9 	ENSMUST00000131412.1|Armc9|ENSMUSG00000062590.7|armadillo repeat containing 9
mm10_v2_chr12_-_64965496_64965538	0.210078	Rfx3_Rfx1_Rfx4	ENSMUST00000021331.7|Klhl28|ENSMUSG00000020948.8|kelch-like 28
mm10_v2_chr17_+_46254017_46254165	0.20974	Rfx3_Rfx1_Rfx4	ENSMUST00000095262.4|Lrrc73|ENSMUSG00000071073.4|leucine rich repeat containing 73
mm10_v2_chr10_+_77259280_77259348	0.209076	Rfx3_Rfx1_Rfx4	ENSMUST00000020493.7|Pofut2|ENSMUSG00000020260.8|protein O-fucosyltransferase 2
mm10_v2_chr4_+_53631506_53631574	0.20832	Rfx3_Rfx1_Rfx4	ENSMUST00000159415.2|Fsd1l|ENSMUSG00000054752.10|fibronectin type III and SPRY domain containing 1-like 	ENSMUST00000163067.2|Fsd1l|ENSMUSG00000054752.10|fibronectin type III and SPRY domain containing 1-like
mm10_v2_chr16_+_32099904_32099973	0.206709	Rfx3_Rfx1_Rfx4	ENSMUST00000042869.6|Cep19|ENSMUSG00000035790.9|centrosomal protein 19
mm10_v2_chr19_+_6364557_6364668	0.205742	Rfx3_Rfx1_Rfx4	ENSMUST00000155973.1|Sf1|ENSMUSG00000024949.11|splicing factor 1
mm10_v2_chr7_-_4546567_4546567	0.201421	Rfx3_Rfx1_Rfx4	ENSMUST00000065957.5|Syt5|ENSMUSG00000004961.6|synaptotagmin V
mm10_v2_chr15_+_81663889_81663958	0.200863	Rfx3_Rfx1_Rfx4	ENSMUST00000023029.8|L3mbtl2|ENSMUSG00000022394.8|l(3)mbt-like 2 (Drosophila) 	ENSMUST00000174229.1|L3mbtl2|ENSMUSG00000022394.8|l(3)mbt-like 2 (Drosophila) 	ENSMUST00000172748.1|L3mbtl2|ENSMUSG00000022394.8|l(3)mbt-like 2 (Drosophila)
mm10_v2_chr17_-_80207299_80207308	0.200556	Rfx3_Rfx1_Rfx4	ENSMUST00000063417.9|Srsf7|ENSMUSG00000024097.10|serine/arginine-rich splicing factor 7
mm10_v2_chr4_-_43031370_43031427	0.199727	Rfx3_Rfx1_Rfx4	ENSMUST00000138030.1|Stoml2|ENSMUSG00000028455.9|stomatin (Epb7.2)-like 2
mm10_v2_chr14_-_55643251_55643382	0.199254	Rfx3_Rfx1_Rfx4	ENSMUST00000120041.1|Tm9sf1|ENSMUSG00000002320.9|transmembrane 9 superfamily member 1 	ENSMUST00000121937.1|Tm9sf1|ENSMUSG00000002320.9|transmembrane 9 superfamily member 1 	ENSMUST00000133707.1|Tm9sf1|ENSMUSG00000002320.9|transmembrane 9 superfamily member 1 	ENSMUST00000002391.8|Tm9sf1|ENSMUSG00000002320.9|transmembrane 9 superfamily member 1 	ENSMUST00000121791.1|Tm9sf1|ENSMUSG00000002320.9|transmembrane 9 superfamily member 1
mm10_v2_chr6_+_117906809_117906863	0.198717	Rfx3_Rfx1_Rfx4	ENSMUST00000177918.1|Hnrnpf|ENSMUSG00000042079.7|heterogeneous nuclear ribonucleoprotein F 	ENSMUST00000163168.2|Hnrnpf|ENSMUSG00000042079.7|heterogeneous nuclear ribonucleoprotein F
mm10_v2_chr1_-_172258410_172258438	0.198262	Rfx3_Rfx1_Rfx4	ENSMUST00000111243.1|Atp1a4|ENSMUSG00000007107.5|ATPase, Na+/K+ transporting, alpha 4 polypeptide
mm10_v2_chr9_+_72985504_72985567	0.196813	Rfx3_Rfx1_Rfx4	ENSMUST00000156879.1|Ccpg1|ENSMUSG00000034563.10|cell cycle progression 1
mm10_v2_chr3_+_108591279_108591414	0.194402	Rfx3_Rfx1_Rfx4	ENSMUST00000051145.8|Wdr47|ENSMUSG00000040389.9|WD repeat domain 47 	ENSMUST00000139626.1|Wdr47|ENSMUSG00000040389.9|WD repeat domain 47
mm10_v2_chr12_-_110889119_110889145	0.193714	Rfx3_Rfx1_Rfx4	ENSMUST00000043716.8|Cinp|ENSMUSG00000021276.9|cyclin-dependent kinase 2 interacting protein
mm10_v2_chr9_+_108049254_108049339	0.193669	Rfx3_Rfx1_Rfx4	ENSMUST00000112295.2|Gmppb|ENSMUSG00000070284.4|GDP-mannose pyrophosphorylase B 	ENSMUST00000047947.7|Gmppb|ENSMUSG00000070284.4|GDP-mannose pyrophosphorylase B
mm10_v2_chr7_+_80232862_80232945	0.193285	Rfx3_Rfx1_Rfx4	ENSMUST00000062915.7|Gdpgp1|ENSMUSG00000050973.10|GDP-D-glucose phosphorylase 1
mm10_v2_chr9_-_110117379_110117445	0.191821	Rfx3_Rfx1_Rfx4	ENSMUST00000111991.2|Dhx30|ENSMUSG00000032480.11|DEAH (Asp-Glu-Ala-His) box polypeptide 30 	ENSMUST00000149199.1|Dhx30|ENSMUSG00000032480.11|DEAH (Asp-Glu-Ala-His) box polypeptide 30 	ENSMUST00000035056.7|Dhx30|ENSMUSG00000032480.11|DEAH (Asp-Glu-Ala-His) box polypeptide 30 	ENSMUST00000148287.1|Dhx30|ENSMUSG00000032480.11|DEAH (Asp-Glu-Ala-His) box polypeptide 30 	ENSMUST00000127744.1|Dhx30|ENSMUSG00000032480.11|DEAH (Asp-Glu-Ala-His) box polypeptide 30
mm10_v2_chr4_+_32983008_32983155	0.190073	Rfx3_Rfx1_Rfx4	ENSMUST00000098190.3|Rragd|ENSMUSG00000028278.8|Ras-related GTP binding D 	ENSMUST00000029946.7|Rragd|ENSMUSG00000028278.8|Ras-related GTP binding D
mm10_v2_chr8_+_36993551_36993611	0.188433	Rfx3_Rfx1_Rfx4	ENSMUST00000098825.3|AI429214|ENSMUSG00000074384.3|expressed sequence AI429214
mm10_v2_chr12_-_21417356_21417436	0.186633	Rfx3_Rfx1_Rfx4	ENSMUST00000103002.1|Ywhaq|ENSMUSG00000076432.6|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide
mm10_v2_chr16_+_78301458_78301496	0.186218	Rfx3_Rfx1_Rfx4	ENSMUST00000023572.7|Cxadr|ENSMUSG00000022865.7|coxsackie virus and adenovirus receptor
mm10_v2_chr12_+_110889231_110889305	0.186122	Rfx3_Rfx1_Rfx4	ENSMUST00000169597.1|Tecpr2|ENSMUSG00000021275.9|tectonin beta-propeller repeat containing 2 	ENSMUST00000165978.1|Tecpr2|ENSMUSG00000021275.9|tectonin beta-propeller repeat containing 2
mm10_v2_chr13_+_42681513_42681564	0.185143	Rfx3_Rfx1_Rfx4	ENSMUST00000149235.1|Phactr1|ENSMUSG00000054728.10|phosphatase and actin regulator 1
mm10_v2_chr2_-_101628930_101628954	0.184636	Rfx3_Rfx1_Rfx4	ENSMUST00000099682.2|B230118H07Rik|ENSMUSG00000027165.10|RIKEN cDNA B230118H07 gene
mm10_v2_chr11_-_69413675_69413675	0.184615	Rfx3_Rfx1_Rfx4	ENSMUST00000094077.4|Kdm6b|ENSMUSG00000018476.7|KDM1 lysine (K)-specific demethylase 6B
mm10_v2_chr3_-_88458876_88459043	0.1839	Rfx3_Rfx1_Rfx4	ENSMUST00000147200.1|Sema4a|ENSMUSG00000028064.11|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A 	ENSMUST00000169222.1|Sema4a|ENSMUSG00000028064.11|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A
mm10_v2_chr16_+_49699198_49699304	0.183719	Rfx3_Rfx1_Rfx4	ENSMUST00000046777.4|Ift57|ENSMUSG00000032965.4|intraflagellar transport 57 	ENSMUST00000142682.1|Ift57|ENSMUSG00000032965.4|intraflagellar transport 57
mm10_v2_chr3_-_88459047_88459101	0.182705	Rfx3_Rfx1_Rfx4	ENSMUST00000165898.1|Sema4a|ENSMUSG00000028064.11|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A 	ENSMUST00000127436.1|Sema4a|ENSMUSG00000028064.11|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A
mm10_v2_chr15_+_59315088_59315128	0.182656	Rfx3_Rfx1_Rfx4	ENSMUST00000100640.4|Sqle|ENSMUSG00000022351.8|squalene epoxidase
mm10_v2_chr11_-_72361837_72361899	0.182583	Rfx3_Rfx1_Rfx4	ENSMUST00000108503.2|Tekt1|ENSMUSG00000020799.10|tektin 1
mm10_v2_chr19_-_10304867_10304954	0.182542	Rfx3_Rfx1_Rfx4	ENSMUST00000039327.4|Dagla|ENSMUSG00000035735.4|diacylglycerol lipase, alpha
mm10_v2_chr5_+_136908130_136908174	0.18211	Rfx3_Rfx1_Rfx4	ENSMUST00000008131.8|Rabl5|ENSMUSG00000007987.8|RAB, member of RAS oncogene family-like 5
mm10_v2_chr9_-_64341288_64341311	0.181208	Rfx3_Rfx1_Rfx4	ENSMUST00000068367.7|Dis3l|ENSMUSG00000032396.11|DIS3 mitotic control homolog (S. cerevisiae)-like
mm10_v2_chr19_+_45560569_45560644	0.181064	Rfx3_Rfx1_Rfx4	ENSMUST00000047057.7|Dpcd|ENSMUSG00000041035.7|deleted in primary ciliary dyskinesia
mm10_v2_chr7_+_116504409_116504430	0.180076	Rfx3_Rfx1_Rfx4	ENSMUST00000183175.1|Nucb2|ENSMUSG00000030659.8|nucleobindin 2
mm10_v2_chr6_+_117906755_117906801	0.179999	Rfx3_Rfx1_Rfx4	ENSMUST00000170346.1|Hnrnpf|ENSMUSG00000042079.7|heterogeneous nuclear ribonucleoprotein F 	ENSMUST00000179224.1|Hnrnpf|ENSMUSG00000042079.7|heterogeneous nuclear ribonucleoprotein F 	ENSMUST00000035493.7|Hnrnpf|ENSMUSG00000042079.7|heterogeneous nuclear ribonucleoprotein F
mm10_v2_chr11_-_101425330_101425388	0.179569	Rfx3_Rfx1_Rfx4	ENSMUST00000103102.3|Ptges3l|ENSMUSG00000097487.1|prostaglandin E synthase 3 (cytosolic)-like
mm10_v2_chr11_-_6606053_6606053	0.177578	Rfx3_Rfx1_Rfx4	ENSMUST00000045713.3|Nacad|ENSMUSG00000041073.4|NAC alpha domain containing
mm10_v2_chr15_+_59315030_59315087	0.177493	Rfx3_Rfx1_Rfx4	ENSMUST00000022977.7|Sqle|ENSMUSG00000022351.8|squalene epoxidase
mm10_v2_chr2_+_152962485_152962510	0.177249	Rfx3_Rfx1_Rfx4	ENSMUST00000099197.2|Ttll9|ENSMUSG00000074673.9|tubulin tyrosine ligase-like family, member 9 	ENSMUST00000103155.3|Ttll9|ENSMUSG00000074673.9|tubulin tyrosine ligase-like family, member 9
mm10_v2_chr7_+_16944645_16944720	0.176531	Rfx3_Rfx1_Rfx4	ENSMUST00000094807.5|Pnmal2|ENSMUSG00000070802.5|PNMA-like 2
mm10_v2_chr1_-_160077918_160077944	0.176405	Rfx3_Rfx1_Rfx4	ENSMUST00000028061.3|4930562F07Rik|ENSMUSG00000026729.4|RIKEN cDNA 4930562F07 gene
mm10_v2_chr3_-_89245159_89245199	0.175752	Rfx3_Rfx1_Rfx4	ENSMUST00000090924.6|Trim46|ENSMUSG00000042766.11|tripartite motif-containing 46
mm10_v2_chr16_+_3908801_3909031	0.173965	Rfx3_Rfx1_Rfx4	ENSMUST00000145150.2|Cluap1|ENSMUSG00000014232.8|clusterin associated protein 1 	ENSMUST00000040881.7|Cluap1|ENSMUSG00000014232.8|clusterin associated protein 1
mm10_v2_chr10_+_81070035_81070121	0.173844	Rfx3_Rfx1_Rfx4	ENSMUST00000005057.6|Thop1|ENSMUSG00000004929.6|thimet oligopeptidase 1
mm10_v2_chr9_-_106685892_106685961	0.173153	Rfx3_Rfx1_Rfx4	ENSMUST00000169068.1|Tex264|ENSMUSG00000040813.9|testis expressed gene 264 	ENSMUST00000046735.4|Tex264|ENSMUSG00000040813.9|testis expressed gene 264
mm10_v2_chr11_+_46235460_46235531	0.17307	Rfx3_Rfx1_Rfx4	ENSMUST00000060185.2|Fndc9|ENSMUSG00000048721.2|fibronectin type III domain containing 9
mm10_v2_chr2_+_90904740_90904778	0.172636	Rfx3_Rfx1_Rfx4	ENSMUST00000111464.1|Kbtbd4|ENSMUSG00000005505.6|kelch repeat and BTB (POZ) domain containing 4 	ENSMUST00000090682.3|Kbtbd4|ENSMUSG00000005505.6|kelch repeat and BTB (POZ) domain containing 4
mm10_v2_chr1_+_151428612_151428718	0.171431	Rfx3_Rfx1_Rfx4	ENSMUST00000065625.5|Trmt1l|ENSMUSG00000053286.5|tRNA methyltransferase 1 like
mm10_v2_chr4_-_149426603_149426749	0.171416	Rfx3_Rfx1_Rfx4	ENSMUST00000103212.3|Ube4b|ENSMUSG00000028960.12|ubiquitination factor E4B, UFD2 homolog (S. cerevisiae)
mm10_v2_chr11_+_72207537_72207620	0.169301	Rfx3_Rfx1_Rfx4	ENSMUST00000021158.3|Txndc17|ENSMUSG00000020803.3|thioredoxin domain containing 17
mm10_v2_chr1_+_165461037_165461037	0.168742	Rfx3_Rfx1_Rfx4	ENSMUST00000027853.5|Mpc2|ENSMUSG00000026568.5|mitochondrial pyruvate carrier 2
mm10_v2_chr1_+_75236439_75236469	0.168335	Rfx3_Rfx1_Rfx4	ENSMUST00000082158.6|Dnajb2|ENSMUSG00000026203.10|DnaJ (Hsp40) homolog, subfamily B, member 2 	ENSMUST00000055223.7|Dnajb2|ENSMUSG00000026203.10|DnaJ (Hsp40) homolog, subfamily B, member 2
mm10_v2_chr15_-_93275151_93275178	0.167833	Rfx3_Rfx1_Rfx4	ENSMUST00000057896.4|Gxylt1|ENSMUSG00000036197.9|glucoside xylosyltransferase 1 	ENSMUST00000049484.6|Gxylt1|ENSMUSG00000036197.9|glucoside xylosyltransferase 1
mm10_v2_chr11_+_20647149_20647156	0.1677	Rfx3_Rfx1_Rfx4	ENSMUST00000109585.1|Sertad2|ENSMUSG00000049800.7|SERTA domain containing 2
mm10_v2_chr7_+_116504363_116504397	0.167563	Rfx3_Rfx1_Rfx4	ENSMUST00000032895.8|Nucb2|ENSMUSG00000030659.8|nucleobindin 2
mm10_v2_chrX_+_7884321_7884378	0.166208	Rfx3_Rfx1_Rfx4	ENSMUST00000096514.3|Slc35a2|ENSMUSG00000031156.11|solute carrier family 35 (UDP-galactose transporter), member A2 	ENSMUST00000123277.1|Slc35a2|ENSMUSG00000031156.11|solute carrier family 35 (UDP-galactose transporter), member A2
mm10_v2_chr7_-_140881811_140881869	0.165893	Rfx3_Rfx1_Rfx4	ENSMUST00000106048.3|Sirt3|ENSMUSG00000025486.10|sirtuin 3 	ENSMUST00000147331.2|Sirt3|ENSMUSG00000025486.10|sirtuin 3 	ENSMUST00000137710.1|Sirt3|ENSMUSG00000025486.10|sirtuin 3
mm10_v2_chr7_-_43313063_43313116	0.164598	Rfx3_Rfx1_Rfx4	ENSMUST00000135130.1|Zfp715|ENSMUSG00000012640.10|zinc finger protein 715 	ENSMUST00000139061.1|Zfp715|ENSMUSG00000012640.10|zinc finger protein 715
mm10_v2_chr15_+_79141324_79141358	0.163914	Rfx3_Rfx1_Rfx4	ENSMUST00000040077.6|Polr2f|ENSMUSG00000033020.6|polymerase (RNA) II (DNA directed) polypeptide F
mm10_v2_chr8_+_124863032_124863089	0.162878	Rfx3_Rfx1_Rfx4	ENSMUST00000034466.3|Gnpat|ENSMUSG00000031985.3|glyceronephosphate O-acyltransferase 	ENSMUST00000161986.1|Gnpat|ENSMUSG00000031985.3|glyceronephosphate O-acyltransferase
mm10_v2_chr7_-_118855602_118855695	0.162541	Rfx3_Rfx1_Rfx4	ENSMUST00000106549.1|Knop1|ENSMUSG00000030980.10|lysine rich nucleolar protein 1 	ENSMUST00000126792.1|Knop1|ENSMUSG00000030980.10|lysine rich nucleolar protein 1
mm10_v2_chr12_-_84361802_84361838	0.162175	Rfx3_Rfx1_Rfx4	ENSMUST00000021659.1|Fam161b|ENSMUSG00000021234.3|family with sequence similarity 161, member B 	ENSMUST00000065536.2|Fam161b|ENSMUSG00000021234.3|family with sequence similarity 161, member B
mm10_v2_chr2_+_32629467_32629514	0.161676	Rfx3_Rfx1_Rfx4	ENSMUST00000068271.4|Ak1|ENSMUSG00000026817.8|adenylate kinase 1
mm10_v2_chr13_+_55464237_55464319	0.161548	Rfx3_Rfx1_Rfx4	ENSMUST00000046533.7|Prr7|ENSMUSG00000034686.7|proline rich 7 (synaptic)
mm10_v2_chrX_+_7884022_7884055	0.160372	Rfx3_Rfx1_Rfx4	ENSMUST00000115660.4|Slc35a2|ENSMUSG00000031156.11|solute carrier family 35 (UDP-galactose transporter), member A2
mm10_v2_chr17_+_28142267_28142321	0.16027	Rfx3_Rfx1_Rfx4	ENSMUST00000043503.3|Scube3|ENSMUSG00000038677.7|signal peptide, CUB domain, EGF-like 3
mm10_v2_chr12_+_113140198_113140257	0.160267	Rfx3_Rfx1_Rfx4	ENSMUST00000084882.4|Crip2|ENSMUSG00000006356.6|cysteine rich protein 2
mm10_v2_chr17_+_35879770_35879824	0.159701	Rfx3_Rfx1_Rfx4	ENSMUST00000025292.8|Dhx16|ENSMUSG00000024422.8|DEAH (Asp-Glu-Ala-His) box polypeptide 16
mm10_v2_chr16_-_59639124_59639191	0.159377	Rfx3_Rfx1_Rfx4	ENSMUST00000149797.1|Arl6|ENSMUSG00000022722.12|ADP-ribosylation factor-like 6 	ENSMUST00000023405.9|Arl6|ENSMUSG00000022722.12|ADP-ribosylation factor-like 6
mm10_v2_chr10_-_42018363_42018436	0.158949	Rfx3_Rfx1_Rfx4	ENSMUST00000162405.1|Armc2|ENSMUSG00000071324.5|armadillo repeat containing 2 	ENSMUST00000095729.4|Armc2|ENSMUSG00000071324.5|armadillo repeat containing 2 	ENSMUST00000161081.1|Armc2|ENSMUSG00000071324.5|armadillo repeat containing 2 	ENSMUST00000160262.2|Armc2|ENSMUSG00000071324.5|armadillo repeat containing 2
mm10_v2_chr9_+_108508005_108508076	0.158877	Rfx3_Rfx1_Rfx4	ENSMUST00000006838.8|Qars|ENSMUSG00000032604.8|glutaminyl-tRNA synthetase 	ENSMUST00000134939.1|Qars|ENSMUSG00000032604.8|glutaminyl-tRNA synthetase
mm10_v2_chr2_+_116900152_116900216	0.157939	Rfx3_Rfx1_Rfx4	ENSMUST00000126467.1|D330050G23Rik|ENSMUSG00000085316.1|RIKEN cDNA D330050G23 gene 	ENSMUST00000128305.1|D330050G23Rik|ENSMUSG00000085316.1|RIKEN cDNA D330050G23 gene 	ENSMUST00000155323.1|D330050G23Rik|ENSMUSG00000085316.1|RIKEN cDNA D330050G23 gene
mm10_v2_chr3_-_89245005_89245031	0.157501	Rfx3_Rfx1_Rfx4	ENSMUST00000107464.1|Trim46|ENSMUSG00000042766.11|tripartite motif-containing 46
mm10_v2_chr1_-_133801031_133801041	0.157347	Rfx3_Rfx1_Rfx4	ENSMUST00000143567.1|Atp2b4|ENSMUSG00000026463.11|ATPase, Ca++ transporting, plasma membrane 4
mm10_v2_chr10_-_117063764_117063814	0.156701	Rfx3_Rfx1_Rfx4	ENSMUST00000047672.7|Cct2|ENSMUSG00000034024.7|chaperonin containing Tcp1, subunit 2 (beta)
mm10_v2_chr7_-_31051431_31051488	0.156646	Rfx3_Rfx1_Rfx4	ENSMUST00000073892.4|Fxyd7|ENSMUSG00000036578.6|FXYD domain-containing ion transport regulator 7
mm10_v2_chr6_+_83156401_83156451	0.156002	Rfx3_Rfx1_Rfx4	ENSMUST00000032106.4|1700003E16Rik|ENSMUSG00000030030.4|RIKEN cDNA 1700003E16 gene
mm10_v2_chr10_-_62578387_62578457	0.155942	Rfx3_Rfx1_Rfx4	ENSMUST00000162525.1|2510003E04Rik|ENSMUSG00000036955.9|RIKEN cDNA 2510003E04 gene 	ENSMUST00000159704.1|2510003E04Rik|ENSMUSG00000036955.9|RIKEN cDNA 2510003E04 gene 	ENSMUST00000162759.1|2510003E04Rik|ENSMUSG00000036955.9|RIKEN cDNA 2510003E04 gene 	ENSMUST00000065887.7|2510003E04Rik|ENSMUSG00000036955.9|RIKEN cDNA 2510003E04 gene
mm10_v2_chr4_+_40722912_40723001	0.154677	Rfx3_Rfx1_Rfx4	ENSMUST00000164233.1|Dnaja1|ENSMUSG00000028410.7|DnaJ (Hsp40) homolog, subfamily A, member 1 	ENSMUST00000137246.1|Dnaja1|ENSMUSG00000028410.7|DnaJ (Hsp40) homolog, subfamily A, member 1 	ENSMUST00000125442.1|Dnaja1|ENSMUSG00000028410.7|DnaJ (Hsp40) homolog, subfamily A, member 1
mm10_v2_chrX_+_151198078_151198140	0.154554	Rfx3_Rfx1_Rfx4	ENSMUST00000184730.1|Wnk3|ENSMUSG00000041245.7|WNK lysine deficient protein kinase 3 	ENSMUST00000184392.1|Wnk3|ENSMUSG00000041245.7|WNK lysine deficient protein kinase 3 	ENSMUST00000096285.4|Wnk3|ENSMUSG00000041245.7|WNK lysine deficient protein kinase 3
mm10_v2_chr14_-_118923070_118923167	0.154331	Rfx3_Rfx1_Rfx4	ENSMUST00000047208.5|Dzip1|ENSMUSG00000042156.9|DAZ interacting protein 1
mm10_v2_chr8_-_78821136_78821143	0.153653	Rfx3_Rfx1_Rfx4	ENSMUST00000130325.1|Lsm6|ENSMUSG00000031683.10|LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae) 	ENSMUST00000051867.6|Lsm6|ENSMUSG00000031683.10|LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)
mm10_v2_chr11_-_59839828_59839843	0.153399	Rfx3_Rfx1_Rfx4	ENSMUST00000019517.3|Cops3|ENSMUSG00000019373.5|COP9 (constitutive photomorphogenic) homolog, subunit 3 (Arabidopsis thaliana)
mm10_v2_chr7_+_30232310_30232350	0.150498	Rfx3_Rfx1_Rfx4	ENSMUST00000108193.1|Polr2i|ENSMUSG00000019738.9|polymerase (RNA) II (DNA directed) polypeptide I 	ENSMUST00000108192.1|Polr2i|ENSMUSG00000019738.9|polymerase (RNA) II (DNA directed) polypeptide I
mm10_v2_chr14_-_8666236_8666279	0.150286	Rfx3_Rfx1_Rfx4	ENSMUST00000102996.3|4930452B06Rik|ENSMUSG00000021747.11|RIKEN cDNA 4930452B06 gene
mm10_v2_chr12_-_110682606_110682623	0.149504	Rfx3_Rfx1_Rfx4	ENSMUST00000070659.5|1700001K19Rik|ENSMUSG00000056508.5|RIKEN cDNA 1700001K19 gene
mm10_v2_chr15_+_31276491_31276491	0.149023	Rfx3_Rfx1_Rfx4	ENSMUST00000068987.5|Fam136b-ps|ENSMUSG00000055416.5|family with sequence similarity 136, member B, pseudogene
mm10_v2_chr6_+_34029421_34029456	0.147655	Rfx3_Rfx1_Rfx4	ENSMUST00000070189.3|Lrguk|ENSMUSG00000056215.6|leucine-rich repeats and guanylate kinase domain containing 	ENSMUST00000101564.2|Lrguk|ENSMUSG00000056215.6|leucine-rich repeats and guanylate kinase domain containing
mm10_v2_chr12_-_32061221_32061301	0.14743	Rfx3_Rfx1_Rfx4	ENSMUST00000003079.5|Prkar2b|ENSMUSG00000002997.9|protein kinase, cAMP dependent regulatory, type II beta 	ENSMUST00000036497.9|Prkar2b|ENSMUSG00000002997.9|protein kinase, cAMP dependent regulatory, type II beta
mm10_v2_chr12_+_72441852_72441866	0.14728	Rfx3_Rfx1_Rfx4	ENSMUST00000162159.1|Lrrc9|ENSMUSG00000021090.9|leucine rich repeat containing 9
mm10_v2_chr1_+_164275559_164275660	0.1471	Rfx3_Rfx1_Rfx4	ENSMUST00000027867.6|Ccdc181|ENSMUSG00000026578.6|coiled-coil domain containing 181
mm10_v2_chr7_-_99141068_99141149	0.146976	Rfx3_Rfx1_Rfx4	ENSMUST00000037968.8|Uvrag|ENSMUSG00000035354.8|UV radiation resistance associated gene
mm10_v2_chr4_+_124802543_124802678	0.146651	Rfx3_Rfx1_Rfx4	ENSMUST00000138807.1|Mtf1|ENSMUSG00000028890.7|metal response element binding transcription factor 1 	ENSMUST00000030723.2|Mtf1|ENSMUSG00000028890.7|metal response element binding transcription factor 1 	ENSMUST00000175875.1|Mtf1|ENSMUSG00000028890.7|metal response element binding transcription factor 1
mm10_v2_chr17_-_23684019_23684032	0.146413	Rfx3_Rfx1_Rfx4	ENSMUST00000085989.5|Cldn9|ENSMUSG00000066720.5|claudin 9
mm10_v2_chr3_-_155093346_155093385	0.145826	Rfx3_Rfx1_Rfx4	ENSMUST00000066568.4|Fpgt|ENSMUSG00000053870.6|fucose-1-phosphate guanylyltransferase
mm10_v2_chr11_-_3895085_3895104	0.145753	Rfx3_Rfx1_Rfx4	ENSMUST00000020712.4|4921536K21Rik|ENSMUSG00000020434.4|RIKEN cDNA 4921536K21 gene
mm10_v2_chr3_+_67374116_67374154	0.145517	Rfx3_Rfx1_Rfx4	ENSMUST00000061322.8|Mlf1|ENSMUSG00000048416.9|myeloid leukemia factor 1
mm10_v2_chr15_+_102331700_102331777	0.144731	Rfx3_Rfx1_Rfx4	ENSMUST00000113682.2|Myg1|ENSMUSG00000001285.6|melanocyte proliferating gene 1 	ENSMUST00000001331.6|Myg1|ENSMUSG00000001285.6|melanocyte proliferating gene 1 	ENSMUST00000171244.1|Myg1|ENSMUSG00000001285.6|melanocyte proliferating gene 1
mm10_v2_chr7_+_126487344_126487390	0.14345	Rfx3_Rfx1_Rfx4	ENSMUST00000098048.4|Tufm|ENSMUSG00000073838.4|Tu translation elongation factor, mitochondrial 	ENSMUST00000106392.3|Tufm|ENSMUSG00000073838.4|Tu translation elongation factor, mitochondrial
mm10_v2_chr15_+_79659196_79659267	0.142679	Rfx3_Rfx1_Rfx4	ENSMUST00000023064.7|Cby1|ENSMUSG00000022428.7|chibby homolog 1 (Drosophila)
mm10_v2_chrX_+_7884244_7884313	0.142225	Rfx3_Rfx1_Rfx4	ENSMUST00000115663.3|Slc35a2|ENSMUSG00000031156.11|solute carrier family 35 (UDP-galactose transporter), member A2
mm10_v2_chr2_-_134644125_134644145	0.142193	Rfx3_Rfx1_Rfx4	ENSMUST00000038228.4|Tmx4|ENSMUSG00000034723.5|thioredoxin-related transmembrane protein 4
mm10_v2_chr19_+_10577439_10577461	0.141994	Rfx3_Rfx1_Rfx4	ENSMUST00000168445.1|Cyb561a3|ENSMUSG00000034445.7|cytochrome b561 family, member A3
mm10_v2_chr10_-_39133848_39133912	0.138674	Rfx3_Rfx1_Rfx4	ENSMUST00000134279.1|Fam229b|ENSMUSG00000051736.2|family with sequence similarity 229, member B 	ENSMUST00000139743.1|Fam229b|ENSMUSG00000051736.2|family with sequence similarity 229, member B 	ENSMUST00000149949.1|Fam229b|ENSMUSG00000051736.2|family with sequence similarity 229, member B 	ENSMUST00000124941.1|Fam229b|ENSMUSG00000051736.2|family with sequence similarity 229, member B 	ENSMUST00000125042.1|Fam229b|ENSMUSG00000051736.2|family with sequence similarity 229, member B 	ENSMUST00000063204.2|Fam229b|ENSMUSG00000051736.2|family with sequence similarity 229, member B
mm10_v2_chr11_+_101552135_101552184	0.136209	Rfx3_Rfx1_Rfx4	ENSMUST00000103099.1|Nbr1|ENSMUSG00000017119.13|neighbor of Brca1 gene 1
mm10_v2_chr7_+_19176416_19176440	0.135866	Rfx3_Rfx1_Rfx4	ENSMUST00000117338.1|Eml2|ENSMUSG00000040811.9|echinoderm microtubule associated protein like 2
mm10_v2_chr12_+_110850273_110850302	0.135261	Rfx3_Rfx1_Rfx4	ENSMUST00000170060.2|Zfp839|ENSMUSG00000021271.4|zinc finger protein 839
mm10_v2_chr5_+_30711564_30711586	0.13506	Rfx3_Rfx1_Rfx4	ENSMUST00000114729.1|Dpysl5|ENSMUSG00000029168.8|dihydropyrimidinase-like 5
mm10_v2_chr4_-_99829180_99829191	0.131837	Rfx3_Rfx1_Rfx4	ENSMUST00000146258.1|Itgb3bp|ENSMUSG00000028549.11|integrin beta 3 binding protein (beta3-endonexin)
mm10_v2_chr1_+_133131143_133131283	0.131473	Rfx3_Rfx1_Rfx4	ENSMUST00000052529.3|Ppp1r15b|ENSMUSG00000046062.5|protein phosphatase 1, regulatory (inhibitor) subunit 15b
mm10_v2_chr2_-_5714490_5714538	0.130669	Rfx3_Rfx1_Rfx4	ENSMUST00000044009.7|Camk1d|ENSMUSG00000039145.10|calcium/calmodulin-dependent protein kinase ID
mm10_v2_chr11_-_101278927_101279114	0.12995	Rfx3_Rfx1_Rfx4	ENSMUST00000168089.1|Coa3|ENSMUSG00000017188.3|cytochrome C oxidase assembly factor 3 	ENSMUST00000017332.3|Coa3|ENSMUSG00000017188.3|cytochrome C oxidase assembly factor 3
mm10_v2_chr7_-_118855984_118856014	0.129682	Rfx3_Rfx1_Rfx4	ENSMUST00000116280.2|Knop1|ENSMUSG00000030980.10|lysine rich nucleolar protein 1 	ENSMUST00000106550.3|Knop1|ENSMUSG00000030980.10|lysine rich nucleolar protein 1 	ENSMUST00000063607.5|Knop1|ENSMUSG00000030980.10|lysine rich nucleolar protein 1
mm10_v2_chr15_-_98763195_98763220	0.126862	Rfx3_Rfx1_Rfx4	ENSMUST00000053183.9|Arf3|ENSMUSG00000051853.8|ADP-ribosylation factor 3
mm10_v2_chr9_-_29412204_29412277	0.126446	Rfx3_Rfx1_Rfx4	ENSMUST00000115237.1|Ntm|ENSMUSG00000059974.4|neurotrimin
mm10_v2_chr2_-_121271403_121271410	0.126182	Rfx3_Rfx1_Rfx4	ENSMUST00000110648.1|Trp53bp1|ENSMUSG00000043909.10|transformation related protein 53 binding protein 1
mm10_v2_chr2_+_71981184_71981287	0.12568	Rfx3_Rfx1_Rfx4	ENSMUST00000090826.5|Rapgef4|ENSMUSG00000049044.10|Rap guanine nucleotide exchange factor (GEF) 4 	ENSMUST00000102698.3|Rapgef4|ENSMUSG00000049044.10|Rap guanine nucleotide exchange factor (GEF) 4
mm10_v2_chrX_-_152368680_152368740	0.125049	Rfx3_Rfx1_Rfx4	ENSMUST00000070316.5|Gpr173|ENSMUSG00000056679.7|G-protein coupled receptor 173
mm10_v2_chr18_-_43687695_43687773	0.12484	Rfx3_Rfx1_Rfx4	ENSMUST00000082254.6|Jakmip2|ENSMUSG00000024502.9|janus kinase and microtubule interacting protein 2
mm10_v2_chr14_+_30951486_30951510	0.12435	Rfx3_Rfx1_Rfx4	ENSMUST00000050171.8|Nek4|ENSMUSG00000021918.9|NIMA (never in mitosis gene a)-related expressed kinase 4
mm10_v2_chr2_-_121271341_121271397	0.124309	Rfx3_Rfx1_Rfx4	ENSMUST00000110647.1|Trp53bp1|ENSMUSG00000043909.10|transformation related protein 53 binding protein 1
mm10_v2_chr15_-_71727815_71727848	0.124251	Rfx3_Rfx1_Rfx4	ENSMUST00000022953.8|Fam135b|ENSMUSG00000036800.7|family with sequence similarity 135, member B
mm10_v2_chr8_-_119575143_119575205	0.124213	Rfx3_Rfx1_Rfx4	ENSMUST00000036049.4|Hsdl1|ENSMUSG00000034189.4|hydroxysteroid dehydrogenase like 1
mm10_v2_chr14_-_55643523_55643600	0.123952	Rfx3_Rfx1_Rfx4	ENSMUST00000132338.1|Tm9sf1|ENSMUSG00000002320.9|transmembrane 9 superfamily member 1
mm10_v2_chr13_-_108158584_108158630	0.121557	Rfx3_Rfx1_Rfx4	ENSMUST00000163558.1|Ndufaf2|ENSMUSG00000068184.6|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 2
mm10_v2_chr11_-_90638062_90638100	0.121317	Rfx3_Rfx1_Rfx4	ENSMUST00000020858.7|Stxbp4|ENSMUSG00000020546.8|syntaxin binding protein 4 	ENSMUST00000107875.1|Stxbp4|ENSMUSG00000020546.8|syntaxin binding protein 4 	ENSMUST00000107872.1|Stxbp4|ENSMUSG00000020546.8|syntaxin binding protein 4 	ENSMUST00000143203.1|Stxbp4|ENSMUSG00000020546.8|syntaxin binding protein 4
mm10_v2_chr15_-_75678732_75678805	0.121301	Rfx3_Rfx1_Rfx4	ENSMUST00000000958.8|Top1mt|ENSMUSG00000000934.8|DNA topoisomerase 1, mitochondrial
mm10_v2_chr1_+_37299882_37299937	0.121193	Rfx3_Rfx1_Rfx4	ENSMUST00000136846.1|Inpp4a|ENSMUSG00000026113.11|inositol polyphosphate-4-phosphatase, type I 	ENSMUST00000027287.4|Inpp4a|ENSMUSG00000026113.11|inositol polyphosphate-4-phosphatase, type I 	ENSMUST00000132401.1|Inpp4a|ENSMUSG00000026113.11|inositol polyphosphate-4-phosphatase, type I
mm10_v2_chr13_-_24937585_24937691	0.12105	Rfx3_Rfx1_Rfx4	ENSMUST00000037615.6|Aldh5a1|ENSMUSG00000035936.6|aldhehyde dehydrogenase family 5, subfamily A1
mm10_v2_chr17_+_34972687_34972705	0.121021	Rfx3_Rfx1_Rfx4	ENSMUST00000007248.3|Hspa1l|ENSMUSG00000007033.3|heat shock protein 1-like
mm10_v2_chr5_-_143732273_143732316	0.120746	Rfx3_Rfx1_Rfx4	ENSMUST00000053287.5|Usp42|ENSMUSG00000051306.7|ubiquitin specific peptidase 42
mm10_v2_chr4_+_41465134_41465159	0.120304	Rfx3_Rfx1_Rfx4	ENSMUST00000030154.6|Nudt2|ENSMUSG00000028443.6|nudix (nucleoside diphosphate linked moiety X)-type motif 2
mm10_v2_chr6_-_91473361_91473470	0.118439	Rfx3_Rfx1_Rfx4	ENSMUST00000040835.7|Chchd4|ENSMUSG00000034203.7|coiled-coil-helix-coiled-coil-helix domain containing 4
mm10_v2_chr17_-_46247968_46248054	0.118314	Rfx3_Rfx1_Rfx4	ENSMUST00000142706.2|Polr1c|ENSMUSG00000067148.9|polymerase (RNA) I polypeptide C 	ENSMUST00000173349.1|Polr1c|ENSMUSG00000067148.9|polymerase (RNA) I polypeptide C 	ENSMUST00000087026.6|Polr1c|ENSMUSG00000067148.9|polymerase (RNA) I polypeptide C
mm10_v2_chr10_-_56228636_56228695	0.116861	Rfx3_Rfx1_Rfx4	ENSMUST00000099739.3|Tbc1d32|ENSMUSG00000038122.8|TBC1 domain family, member 32
mm10_v2_chr2_-_36049365_36049406	0.116859	Rfx3_Rfx1_Rfx4	ENSMUST00000070112.5|Ndufa8|ENSMUSG00000026895.7|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 8
mm10_v2_chr9_-_7176957_7176997	0.116461	Rfx3_Rfx1_Rfx4	ENSMUST00000147193.1|Dync2h1|ENSMUSG00000047193.9|dynein cytoplasmic 2 heavy chain 1 	ENSMUST00000139115.1|Dync2h1|ENSMUSG00000047193.9|dynein cytoplasmic 2 heavy chain 1
mm10_v2_chr6_-_33060172_33060252	0.11534	Rfx3_Rfx1_Rfx4	ENSMUST00000115091.1|Chchd3|ENSMUSG00000053768.7|coiled-coil-helix-coiled-coil-helix domain containing 3 	ENSMUST00000127666.1|Chchd3|ENSMUSG00000053768.7|coiled-coil-helix-coiled-coil-helix domain containing 3
mm10_v2_chr3_+_130068390_130068412	0.114926	Rfx3_Rfx1_Rfx4	ENSMUST00000076703.6|Gm9396|ENSMUSG00000063328.6|predicted gene 9396
mm10_v2_chr12_+_8313425_8313454	0.11437	Rfx3_Rfx1_Rfx4	ENSMUST00000020927.8|Hs1bp3|ENSMUSG00000020605.8|HCLS1 binding protein 3
mm10_v2_chr5_+_30711849_30711905	0.114259	Rfx3_Rfx1_Rfx4	ENSMUST00000088081.4|Dpysl5|ENSMUSG00000029168.8|dihydropyrimidinase-like 5 	ENSMUST00000101442.3|Dpysl5|ENSMUSG00000029168.8|dihydropyrimidinase-like 5
mm10_v2_chr7_+_19149722_19149844	0.114144	Rfx3_Rfx1_Rfx4	ENSMUST00000049294.2|Snrpd2|ENSMUSG00000040824.2|small nuclear ribonucleoprotein D2
mm10_v2_chr11_+_3895223_3895310	0.114082	Rfx3_Rfx1_Rfx4	ENSMUST00000055931.4|Dusp18|ENSMUSG00000047205.6|dual specificity phosphatase 18 	ENSMUST00000109996.1|Dusp18|ENSMUSG00000047205.6|dual specificity phosphatase 18
mm10_v2_chr11_-_103267405_103267472	0.114012	Rfx3_Rfx1_Rfx4	ENSMUST00000021324.2|Map3k14|ENSMUSG00000020941.7|mitogen-activated protein kinase kinase kinase 14
mm10_v2_chr13_+_91461050_91461125	0.112545	Rfx3_Rfx1_Rfx4	ENSMUST00000004094.8|Ssbp2|ENSMUSG00000003992.8|single-stranded DNA binding protein 2 	ENSMUST00000042122.8|Ssbp2|ENSMUSG00000003992.8|single-stranded DNA binding protein 2
mm10_v2_chr14_-_60197173_60197185	0.112224	Rfx3_Rfx1_Rfx4	ENSMUST00000131670.1|Atp8a2|ENSMUSG00000021983.9|ATPase, aminophospholipid transporter-like, class I, type 8A, member 2
mm10_v2_chr1_-_59119748_59119806	0.112171	Rfx3_Rfx1_Rfx4	ENSMUST00000087475.4|Tmem237|ENSMUSG00000038079.8|transmembrane protein 237
mm10_v2_chr2_+_119288725_119288771	0.111971	Rfx3_Rfx1_Rfx4	ENSMUST00000037280.4|Vps18|ENSMUSG00000034216.6|vacuolar protein sorting 18 (yeast)
mm10_v2_chr3_+_65109343_65109420	0.111138	Rfx3_Rfx1_Rfx4	ENSMUST00000159525.1|Kcnab1|ENSMUSG00000027827.10|potassium voltage-gated channel, shaker-related subfamily, beta member 1 	ENSMUST00000049230.8|Kcnab1|ENSMUSG00000027827.10|potassium voltage-gated channel, shaker-related subfamily, beta member 1
mm10_v2_chr5_+_38039224_38039299	0.111047	Rfx3_Rfx1_Rfx4	ENSMUST00000031008.6|Stx18|ENSMUSG00000029125.8|syntaxin 18 	ENSMUST00000042146.8|Stx18|ENSMUSG00000029125.8|syntaxin 18 	ENSMUST00000154929.1|Stx18|ENSMUSG00000029125.8|syntaxin 18
mm10_v2_chr9_+_98563704_98563737	0.110679	Rfx3_Rfx1_Rfx4	ENSMUST00000035033.5|Copb2|ENSMUSG00000032458.5|coatomer protein complex, subunit beta 2 (beta prime)
mm10_v2_chr2_+_112239468_112239508	0.109568	Rfx3_Rfx1_Rfx4	ENSMUST00000028554.3|Lpcat4|ENSMUSG00000027134.4|lysophosphatidylcholine acyltransferase 4
mm10_v2_chr17_-_53463315_53463340	0.109503	Rfx3_Rfx1_Rfx4	ENSMUST00000024725.4|Efhb|ENSMUSG00000023931.4|EF hand domain family, member B
mm10_v2_chr19_+_43689672_43689695	0.109323	Rfx3_Rfx1_Rfx4	ENSMUST00000081079.5|Entpd7|ENSMUSG00000025192.7|ectonucleoside triphosphate diphosphohydrolase 7
mm10_v2_chr15_-_84065329_84065364	0.109316	Rfx3_Rfx1_Rfx4	ENSMUST00000156187.1|Efcab6|ENSMUSG00000022441.11|EF-hand calcium binding domain 6
mm10_v2_chr6_+_48593927_48593952	0.10916	Rfx3_Rfx1_Rfx4	ENSMUST00000135151.1|Repin1|ENSMUSG00000052751.10|replication initiator 1
mm10_v2_chr14_-_78536762_78536851	0.109156	Rfx3_Rfx1_Rfx4	ENSMUST00000123853.1|Akap11|ENSMUSG00000022016.9|A kinase (PRKA) anchor protein 11
mm10_v2_chr12_-_21417591_21417637	0.108897	Rfx3_Rfx1_Rfx4	ENSMUST00000135088.1|Ywhaq|ENSMUSG00000076432.6|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide
mm10_v2_chr8_+_13705884_13705952	0.108555	Rfx3_Rfx1_Rfx4	ENSMUST00000166277.1|4932443I19Rik|ENSMUSG00000090336.1|RIKEN cDNA 4932443I19 gene
mm10_v2_chr19_-_23652780_23652820	0.1067	Rfx3_Rfx1_Rfx4	ENSMUST00000035849.3|1700028P14Rik|ENSMUSG00000033053.3|RIKEN cDNA 1700028P14 gene
mm10_v2_chr10_+_74967164_74967203	0.106683	Rfx3_Rfx1_Rfx4	ENSMUST00000037813.4|Gnaz|ENSMUSG00000040009.5|guanine nucleotide binding protein, alpha z subunit
mm10_v2_chr9_+_105395348_105395411	0.106251	Rfx3_Rfx1_Rfx4	ENSMUST00000035181.3|Aste1|ENSMUSG00000032567.8|asteroid homolog 1 (Drosophila)
mm10_v2_chr15_+_30172570_30172600	0.105794	Rfx3_Rfx1_Rfx4	ENSMUST00000081728.5|Ctnnd2|ENSMUSG00000022240.9|catenin (cadherin associated protein), delta 2
mm10_v2_chr3_+_95134088_95134088	0.10493	Rfx3_Rfx1_Rfx4	ENSMUST00000066386.5|Lysmd1|ENSMUSG00000053769.5|LysM, putative peptidoglycan-binding, domain containing 1
mm10_v2_chr7_-_98145472_98145502	0.104891	Rfx3_Rfx1_Rfx4	ENSMUST00000098281.2|Omp|ENSMUSG00000074006.2|olfactory marker protein
mm10_v2_chr18_-_70530313_70530434	0.10483	Rfx3_Rfx1_Rfx4	ENSMUST00000043286.8|Poli|ENSMUSG00000038425.11|polymerase (DNA directed), iota
mm10_v2_chr1_+_183388981_183388981	0.103847	Rfx3_Rfx1_Rfx4	ENSMUST00000097043.5|Taf1a|ENSMUSG00000072258.5|TATA box binding protein (Tbp)-associated factor, RNA polymerase I, A
mm10_v2_chr18_-_61176994_61177057	0.102783	Rfx3_Rfx1_Rfx4	ENSMUST00000091884.4|Hmgxb3|ENSMUSG00000024622.7|HMG box domain containing 3
mm10_v2_chr1_-_59120079_59120135	0.102308	Rfx3_Rfx1_Rfx4	ENSMUST00000094917.3|Tmem237|ENSMUSG00000038079.8|transmembrane protein 237
mm10_v2_chr11_-_5878207_5878292	0.102145	Rfx3_Rfx1_Rfx4	ENSMUST00000102922.3|Pold2|ENSMUSG00000020471.5|polymerase (DNA directed), delta 2, regulatory subunit
mm10_v2_chr8_-_34965631_34965714	0.101901	Rfx3_Rfx1_Rfx4	ENSMUST00000033929.4|Tnks|ENSMUSG00000031529.4|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase
mm10_v2_chr11_+_22512088_22512088	0.101434	Rfx3_Rfx1_Rfx4	ENSMUST00000059319.7|Tmem17|ENSMUSG00000049904.7|transmembrane protein 17
mm10_v2_chrX_-_51205773_51205839	0.101319	Rfx3_Rfx1_Rfx4	ENSMUST00000114875.1|Mbnl3|ENSMUSG00000036109.11|muscleblind-like 3 (Drosophila)
mm10_v2_chr4_+_141213948_141213998	0.100526	Rfx3_Rfx1_Rfx4	ENSMUST00000097813.2|Rsg1|ENSMUSG00000073733.4|REM2 and RAB-like small GTPase 1
mm10_v2_chr2_-_75938407_75938462	0.10046	Rfx3_Rfx1_Rfx4	ENSMUST00000099996.3|Ttc30b|ENSMUSG00000075273.3|tetratricopeptide repeat domain 30B
mm10_v2_chr2_-_3332566_3332650	0.0999908	Rfx3_Rfx1_Rfx4	ENSMUST00000062672.6|Rpp38|ENSMUSG00000049950.6|ribonuclease P/MRP 38 subunit
mm10_v2_chr13_-_100104064_100104082	0.0988372	Rfx3_Rfx1_Rfx4	ENSMUST00000038104.5|Bdp1|ENSMUSG00000049658.7|B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB
mm10_v2_chr17_+_46248069_46248139	0.0982173	Rfx3_Rfx1_Rfx4	ENSMUST00000095263.3|Yipf3|ENSMUSG00000071074.3|Yip1 domain family, member 3 	ENSMUST00000123311.1|Yipf3|ENSMUSG00000071074.3|Yip1 domain family, member 3
mm10_v2_chr12_-_21417526_21417588	0.0980131	Rfx3_Rfx1_Rfx4	ENSMUST00000049531.9|Ywhaq|ENSMUSG00000076432.6|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide 	ENSMUST00000155480.1|Ywhaq|ENSMUSG00000076432.6|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide
mm10_v2_chr15_-_83122756_83122801	0.097938	Rfx3_Rfx1_Rfx4	ENSMUST00000018184.3|Rrp7a|ENSMUSG00000018040.3|ribosomal RNA processing 7 homolog A (S. cerevisiae)
mm10_v2_chr1_-_31222604_31222620	0.0978931	Rfx3_Rfx1_Rfx4	ENSMUST00000127775.1|4931428L18Rik|ENSMUSG00000086727.1|RIKEN cDNA 4931428L18 gene
mm10_v2_chr4_+_126096623_126096708	0.0977721	Rfx3_Rfx1_Rfx4	ENSMUST00000055575.7|Lsm10|ENSMUSG00000050188.8|U7 snRNP-specific Sm-like protein LSM10 	ENSMUST00000179323.1|Lsm10|ENSMUSG00000050188.8|U7 snRNP-specific Sm-like protein LSM10 	ENSMUST00000151831.1|Lsm10|ENSMUSG00000050188.8|U7 snRNP-specific Sm-like protein LSM10
mm10_v2_chr11_+_49794157_49794187	0.0974177	Rfx3_Rfx1_Rfx4	ENSMUST00000020629.4|Gfpt2|ENSMUSG00000020363.6|glutamine fructose-6-phosphate transaminase 2
mm10_v2_chr18_+_56707725_56707940	0.0973428	Rfx3_Rfx1_Rfx4	ENSMUST00000025486.8|Lmnb1|ENSMUSG00000024590.8|lamin B1
mm10_v2_chr19_+_5050807_5050858	0.0969268	Rfx3_Rfx1_Rfx4	ENSMUST00000025818.6|Rin1|ENSMUSG00000024883.6|Ras and Rab interactor 1
mm10_v2_chr2_-_18998126_18998202	0.0960421	Rfx3_Rfx1_Rfx4	ENSMUST00000006912.5|Pip4k2a|ENSMUSG00000026737.6|phosphatidylinositol-5-phosphate 4-kinase, type II, alpha
mm10_v2_chr5_+_136919137_136919188	0.0956321	Rfx3_Rfx1_Rfx4	ENSMUST00000181045.1|4933404O12Rik|ENSMUSG00000097908.1|RIKEN cDNA 4933404O12 gene
mm10_v2_chr8_-_124863008_124863029	0.0947036	Rfx3_Rfx1_Rfx4	ENSMUST00000034465.7|2810004N23Rik|ENSMUSG00000031984.7|RIKEN cDNA 2810004N23 gene
mm10_v2_chr3_+_68468162_68468209	0.0946127	Rfx3_Rfx1_Rfx4	ENSMUST00000182532.1|Schip1|ENSMUSG00000027777.9|schwannomin interacting protein 1
mm10_v2_chr5_+_34761734_34761780	0.0940549	Rfx3_Rfx1_Rfx4	ENSMUST00000080036.2|Htt|ENSMUSG00000029104.9|huntingtin
mm10_v2_chr7_-_80232479_80232498	0.0939326	Rfx3_Rfx1_Rfx4	ENSMUST00000123279.1|Cib1|ENSMUSG00000030538.9|calcium and integrin binding 1 (calmyrin)
mm10_v2_chr3_-_144720315_144720336	0.0939029	Rfx3_Rfx1_Rfx4	ENSMUST00000163279.1|Sh3glb1|ENSMUSG00000037062.9|SH3-domain GRB2-like B1 (endophilin)
mm10_v2_chr8_+_47713266_47713266	0.093327	Rfx3_Rfx1_Rfx4	ENSMUST00000180928.1|E030037K01Rik|ENSMUSG00000097706.1|RIKEN cDNA E030037K01 gene
mm10_v2_chr19_+_10001669_10001703	0.0932749	Rfx3_Rfx1_Rfx4	ENSMUST00000121418.1|Rab3il1|ENSMUSG00000024663.11|RAB3A interacting protein (rabin3)-like 1
mm10_v2_chr11_+_90638127_90638207	0.0927399	Rfx3_Rfx1_Rfx4	ENSMUST00000020851.8|Cox11|ENSMUSG00000020544.8|cytochrome c oxidase assembly protein 11
mm10_v2_chr7_-_43313233_43313285	0.092208	Rfx3_Rfx1_Rfx4	ENSMUST00000012796.7|Zfp715|ENSMUSG00000012640.10|zinc finger protein 715 	ENSMUST00000107986.2|Zfp715|ENSMUSG00000012640.10|zinc finger protein 715
mm10_v2_chr7_+_30231884_30231948	0.0920158	Rfx3_Rfx1_Rfx4	ENSMUST00000019882.9|Polr2i|ENSMUSG00000019738.9|polymerase (RNA) II (DNA directed) polypeptide I
mm10_v2_chr4_+_137681663_137681719	0.0910175	Rfx3_Rfx1_Rfx4	ENSMUST00000047243.5|Rap1gap|ENSMUSG00000041351.10|Rap1 GTPase-activating protein
mm10_v2_chr18_-_70530138_70530284	0.0902829	Rfx3_Rfx1_Rfx4	ENSMUST00000161542.1|Poli|ENSMUSG00000038425.11|polymerase (DNA directed), iota 	ENSMUST00000159389.1|Poli|ENSMUSG00000038425.11|polymerase (DNA directed), iota
mm10_v2_chr1_+_64690443_64690467	0.090047	Rfx3_Rfx1_Rfx4	ENSMUST00000114077.1|Ccnyl1|ENSMUSG00000070871.4|cyclin Y-like 1
mm10_v2_chr19_-_10555724_10555761	0.0893345	Rfx3_Rfx1_Rfx4	ENSMUST00000145210.1|Tmem216|ENSMUSG00000024667.5|transmembrane protein 216 	ENSMUST00000123788.1|Tmem216|ENSMUSG00000024667.5|transmembrane protein 216 	ENSMUST00000059582.2|Tmem216|ENSMUSG00000024667.5|transmembrane protein 216 	ENSMUST00000154383.1|Tmem216|ENSMUSG00000024667.5|transmembrane protein 216
mm10_v2_chr17_-_56609689_56609771	0.088441	Rfx3_Rfx1_Rfx4	ENSMUST00000052832.5|2410015M20Rik|ENSMUSG00000049760.5|RIKEN cDNA 2410015M20 gene
mm10_v2_chr3_+_124321031_124321113	0.0879461	Rfx3_Rfx1_Rfx4	ENSMUST00000058994.4|Tram1l1|ENSMUSG00000044528.4|translocation associated membrane protein 1-like 1
mm10_v2_chr10_+_119992962_119993070	0.0871897	Rfx3_Rfx1_Rfx4	ENSMUST00000154238.1|Grip1|ENSMUSG00000034813.10|glutamate receptor interacting protein 1
mm10_v2_chr12_+_64965742_64965775	0.0864628	Rfx3_Rfx1_Rfx4	ENSMUST00000066296.7|Fam179b|ENSMUSG00000035614.10|family with sequence similarity 179, member B
mm10_v2_chr14_+_60784558_60784675	0.0847927	Rfx3_Rfx1_Rfx4	ENSMUST00000063562.7|Mipep|ENSMUSG00000021993.9|mitochondrial intermediate peptidase
mm10_v2_chr2_-_167060417_167060430	0.0843883	Rfx3_Rfx1_Rfx4	ENSMUST00000155281.1|Znfx1|ENSMUSG00000039501.8|zinc finger, NFX1-type containing 1
mm10_v2_chr17_-_87446854_87446935	0.0842308	Rfx3_Rfx1_Rfx4	ENSMUST00000040440.6|Calm2|ENSMUSG00000036438.6|calmodulin 2
mm10_v2_chr11_+_114668524_114668626	0.0834063	Rfx3_Rfx1_Rfx4	ENSMUST00000106602.3|Rpl38|ENSMUSG00000057322.6|ribosomal protein L38 	ENSMUST00000077915.3|Rpl38|ENSMUSG00000057322.6|ribosomal protein L38 	ENSMUST00000106599.1|Rpl38|ENSMUSG00000057322.6|ribosomal protein L38 	ENSMUST00000082092.4|Rpl38|ENSMUSG00000057322.6|ribosomal protein L38
mm10_v2_chr7_+_28179469_28179535	0.0818986	Rfx3_Rfx1_Rfx4	ENSMUST00000085901.6|Dyrk1b|ENSMUSG00000002409.11|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1b 	ENSMUST00000172761.1|Dyrk1b|ENSMUSG00000002409.11|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1b
mm10_v2_chr13_+_108158723_108158754	0.0818056	Rfx3_Rfx1_Rfx4	ENSMUST00000054835.8|Ercc8|ENSMUSG00000021694.12|excision repaiross-complementing rodent repair deficiency, complementation group 8 	ENSMUST00000120672.1|Ercc8|ENSMUSG00000021694.12|excision repaiross-complementing rodent repair deficiency, complementation group 8
mm10_v2_chr2_-_30048827_30048891	0.0807707	Rfx3_Rfx1_Rfx4	ENSMUST00000113711.2|Wdr34|ENSMUSG00000039715.8|WD repeat domain 34
mm10_v2_chr4_+_123904907_123904916	0.0806356	Rfx3_Rfx1_Rfx4	ENSMUST00000106202.3|Mycbp|ENSMUSG00000028647.7|c-myc binding protein
mm10_v2_chr7_-_79743034_79743088	0.0799157	Rfx3_Rfx1_Rfx4	ENSMUST00000032761.7|Pex11a|ENSMUSG00000030545.8|peroxisomal biogenesis factor 11 alpha
mm10_v2_chr5_+_30281377_30281447	0.0796495	Rfx3_Rfx1_Rfx4	ENSMUST00000101448.3|Drc1|ENSMUSG00000073102.3|dynein regulatory complex subunit 1
mm10_v2_chr5_+_122372451_122372513	0.0795578	Rfx3_Rfx1_Rfx4	ENSMUST00000031420.4|Gpn3|ENSMUSG00000029464.4|GPN-loop GTPase 3
mm10_v2_chr16_+_14580221_14580221	0.0794673	Rfx3_Rfx1_Rfx4	ENSMUST00000147024.1|A630010A05Rik|ENSMUSG00000075395.4|RIKEN cDNA A630010A05 gene
mm10_v2_chr16_-_91728701_91728802	0.0792462	Rfx3_Rfx1_Rfx4	ENSMUST00000114023.2|Cryzl1|ENSMUSG00000058240.7|crystallin, zeta (quinone reductase)-like 1 	ENSMUST00000117644.1|Cryzl1|ENSMUSG00000058240.7|crystallin, zeta (quinone reductase)-like 1
mm10_v2_chr14_+_48446340_48446429	0.0791511	Rfx3_Rfx1_Rfx4	ENSMUST00000111735.2|Tmem260|ENSMUSG00000036339.11|transmembrane protein 260
mm10_v2_chr5_-_124187150_124187225	0.0790771	Rfx3_Rfx1_Rfx4	ENSMUST00000161938.1|Pitpnm2|ENSMUSG00000029406.9|phosphatidylinositol transfer protein, membrane-associated 2
mm10_v2_chrX_+_136993147_136993216	0.0784087	Rfx3_Rfx1_Rfx4	ENSMUST00000113067.1|Zcchc18|ENSMUSG00000031428.5|zinc finger, CCHC domain containing 18 	ENSMUST00000101227.2|Zcchc18|ENSMUSG00000031428.5|zinc finger, CCHC domain containing 18
mm10_v2_chr6_-_33060256_33060267	0.0782986	Rfx3_Rfx1_Rfx4	ENSMUST00000066379.4|Chchd3|ENSMUSG00000053768.7|coiled-coil-helix-coiled-coil-helix domain containing 3
mm10_v2_chr5_-_115652974_115652992	0.0771547	Rfx3_Rfx1_Rfx4	ENSMUST00000121746.1|Ccdc64|ENSMUSG00000041609.10|coiled-coil domain containing 64 	ENSMUST00000118576.1|Ccdc64|ENSMUSG00000041609.10|coiled-coil domain containing 64
mm10_v2_chr4_+_103114712_103114762	0.0771339	Rfx3_Rfx1_Rfx4	ENSMUST00000143417.1|Mier1|ENSMUSG00000028522.10|mesoderm induction early response 1 homolog (Xenopus laevis
mm10_v2_chr11_-_120991305_120991339	0.0770126	Rfx3_Rfx1_Rfx4	ENSMUST00000018274.3|Csnk1d|ENSMUSG00000025162.11|casein kinase 1, delta
mm10_v2_chr3_-_146770218_146770261	0.0766153	Rfx3_Rfx1_Rfx4	ENSMUST00000106137.1|Prkacb|ENSMUSG00000005034.9|protein kinase, cAMP dependent, catalytic, beta
mm10_v2_chr18_+_35965036_35965087	0.0765247	Rfx3_Rfx1_Rfx4	ENSMUST00000176873.1|Psd2|ENSMUSG00000024347.10|pleckstrin and Sec7 domain containing 2 	ENSMUST00000177432.1|Psd2|ENSMUSG00000024347.10|pleckstrin and Sec7 domain containing 2
mm10_v2_chr15_+_80948484_80948549	0.076468	Rfx3_Rfx1_Rfx4	ENSMUST00000023043.2|Adsl|ENSMUSG00000022407.2|adenylosuccinate lyase 	ENSMUST00000168756.1|Adsl|ENSMUSG00000022407.2|adenylosuccinate lyase 	ENSMUST00000164806.1|Adsl|ENSMUSG00000022407.2|adenylosuccinate lyase
mm10_v2_chr5_-_92675253_92675287	0.0760896	Rfx3_Rfx1_Rfx4	ENSMUST00000151180.1|Ccdc158|ENSMUSG00000050050.10|coiled-coil domain containing 158 	ENSMUST00000150359.1|Ccdc158|ENSMUSG00000050050.10|coiled-coil domain containing 158
mm10_v2_chr5_-_23844085_23844161	0.0757081	Rfx3_Rfx1_Rfx4	ENSMUST00000030851.6|Tomm7|ENSMUSG00000028998.6|translocase of outer mitochondrial membrane 7 homolog (yeast)
mm10_v2_chr11_+_109650921_109651003	0.0756146	Rfx3_Rfx1_Rfx4	ENSMUST00000049527.6|Prkar1a|ENSMUSG00000020612.10|protein kinase, cAMP dependent regulatory, type I, alpha
mm10_v2_chr12_+_85219475_85219546	0.0743439	Rfx3_Rfx1_Rfx4	ENSMUST00000004910.5|Eif2b2|ENSMUSG00000004788.5|eukaryotic translation initiation factor 2B, subunit 2 beta 	ENSMUST00000140900.1|Eif2b2|ENSMUSG00000004788.5|eukaryotic translation initiation factor 2B, subunit 2 beta 	ENSMUST00000136495.1|Eif2b2|ENSMUSG00000004788.5|eukaryotic translation initiation factor 2B, subunit 2 beta
mm10_v2_chr9_+_46012822_46013000	0.0743247	Rfx3_Rfx1_Rfx4	ENSMUST00000120463.2|Sik3|ENSMUSG00000034135.8|SIK family kinase 3 	ENSMUST00000120247.1|Sik3|ENSMUSG00000034135.8|SIK family kinase 3
mm10_v2_chr6_-_77979515_77979622	0.0740904	Rfx3_Rfx1_Rfx4	ENSMUST00000159626.1|Ctnna2|ENSMUSG00000063063.6|catenin (cadherin associated protein), alpha 2 	ENSMUST00000075340.5|Ctnna2|ENSMUSG00000063063.6|catenin (cadherin associated protein), alpha 2 	ENSMUST00000162273.1|Ctnna2|ENSMUSG00000063063.6|catenin (cadherin associated protein), alpha 2
mm10_v2_chr1_-_36445248_36445271	0.073032	Rfx3_Rfx1_Rfx4	ENSMUST00000125304.1|Lman2l|ENSMUSG00000001143.7|lectin, mannose-binding 2-like 	ENSMUST00000115011.1|Lman2l|ENSMUSG00000001143.7|lectin, mannose-binding 2-like
mm10_v2_chr8_+_94666722_94666769	0.0721125	Rfx3_Rfx1_Rfx4	ENSMUST00000034228.8|Arl2bp|ENSMUSG00000031776.10|ADP-ribosylation factor-like 2 binding protein
mm10_v2_chr6_-_88518760_88518905	0.0720602	Rfx3_Rfx1_Rfx4	ENSMUST00000032168.5|Sec61a1|ENSMUSG00000030082.8|Sec61 alpha 1 subunit (S. cerevisiae)
mm10_v2_chr6_-_100671126_100671178	0.0717681	Rfx3_Rfx1_Rfx4	ENSMUST00000089245.6|Shq1|ENSMUSG00000035378.11|SHQ1 homolog (S. cerevisiae) 	ENSMUST00000113312.2|Shq1|ENSMUSG00000035378.11|SHQ1 homolog (S. cerevisiae) 	ENSMUST00000170667.1|Shq1|ENSMUSG00000035378.11|SHQ1 homolog (S. cerevisiae)
mm10_v2_chr7_+_27473761_27473773	0.0717663	Rfx3_Rfx1_Rfx4	ENSMUST00000068641.6|Sertad3|ENSMUSG00000055200.6|SERTA domain containing 3
mm10_v2_chr10_-_116950366_116950432	0.0717523	Rfx3_Rfx1_Rfx4	ENSMUST00000020375.6|Rab3ip|ENSMUSG00000064181.5|RAB3A interacting protein
mm10_v2_chr17_-_36951636_36951741	0.0716002	Rfx3_Rfx1_Rfx4	ENSMUST00000040402.7|Ppp1r11|ENSMUSG00000036398.7|protein phosphatase 1, regulatory (inhibitor) subunit 11 	ENSMUST00000174711.1|Ppp1r11|ENSMUSG00000036398.7|protein phosphatase 1, regulatory (inhibitor) subunit 11
mm10_v2_chr12_-_11265768_11265816	0.0714996	Rfx3_Rfx1_Rfx4	ENSMUST00000166117.1|Gen1|ENSMUSG00000051235.8|Gen homolog 1, endonuclease (Drosophila)
mm10_v2_chr2_-_36136602_36136625	0.0709364	Rfx3_Rfx1_Rfx4	ENSMUST00000122456.1|Rbm18|ENSMUSG00000026889.6|RNA binding motif protein 18
mm10_v2_chr7_-_44929410_44929521	0.0708893	Rfx3_Rfx1_Rfx4	ENSMUST00000107857.3|Ap2a1|ENSMUSG00000060279.7|adaptor-related protein complex 2, alpha 1 subunit 	ENSMUST00000085399.6|Ap2a1|ENSMUSG00000060279.7|adaptor-related protein complex 2, alpha 1 subunit 	ENSMUST00000167930.1|Ap2a1|ENSMUSG00000060279.7|adaptor-related protein complex 2, alpha 1 subunit 	ENSMUST00000166972.1|Ap2a1|ENSMUSG00000060279.7|adaptor-related protein complex 2, alpha 1 subunit
mm10_v2_chr18_+_35965088_35965110	0.0706343	Rfx3_Rfx1_Rfx4	ENSMUST00000175734.1|Psd2|ENSMUSG00000024347.10|pleckstrin and Sec7 domain containing 2
mm10_v2_chr15_-_36794498_36794547	0.0702591	Rfx3_Rfx1_Rfx4	ENSMUST00000110361.1|Ywhaz|ENSMUSG00000022285.10|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide 	ENSMUST00000022894.7|Ywhaz|ENSMUSG00000022285.10|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide 	ENSMUST00000110359.1|Ywhaz|ENSMUSG00000022285.10|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide
mm10_v2_chr12_+_72441933_72441970	0.0702085	Rfx3_Rfx1_Rfx4	ENSMUST00000161284.1|Lrrc9|ENSMUSG00000021090.9|leucine rich repeat containing 9
mm10_v2_chrX_+_166170449_166170512	0.0698084	Rfx3_Rfx1_Rfx4	ENSMUST00000130880.2|Gemin8|ENSMUSG00000040621.8|gem (nuclear organelle) associated protein 8 	ENSMUST00000056410.4|Gemin8|ENSMUSG00000040621.8|gem (nuclear organelle) associated protein 8 	ENSMUST00000096252.3|Gemin8|ENSMUSG00000040621.8|gem (nuclear organelle) associated protein 8 	ENSMUST00000087169.4|Gemin8|ENSMUSG00000040621.8|gem (nuclear organelle) associated protein 8
mm10_v2_chr17_-_34118476_34118522	0.0692937	Rfx3_Rfx1_Rfx4	ENSMUST00000095347.5|Brd2|ENSMUSG00000024335.13|bromodomain containing 2
mm10_v2_chr9_+_44398176_44398176	0.0692244	Rfx3_Rfx1_Rfx4	ENSMUST00000165839.1|Slc37a4|ENSMUSG00000032114.8|solute carrier family 37 (glucose-6-phosphate transporter), member 4
mm10_v2_chr7_+_16738410_16738476	0.0691558	Rfx3_Rfx1_Rfx4	ENSMUST00000086112.6|Ap2s1|ENSMUSG00000008036.10|adaptor-related protein complex 2, sigma 1 subunit
mm10_v2_chr5_+_134099704_134099760	0.0690483	Rfx3_Rfx1_Rfx4	ENSMUST00000016088.8|Gatsl2|ENSMUSG00000015944.8|GATS protein-like 2
mm10_v2_chr2_-_169405435_169405473	0.0687535	Rfx3_Rfx1_Rfx4	ENSMUST00000131509.1|4930529I22Rik|ENSMUSG00000085350.1|RIKEN cDNA 4930529I22 gene
mm10_v2_chr6_-_102464667_102464667	0.0685693	Rfx3_Rfx1_Rfx4	ENSMUST00000032159.6|Cntn3|ENSMUSG00000030075.8|contactin 3
mm10_v2_chr3_-_108085346_108085412	0.0684477	Rfx3_Rfx1_Rfx4	ENSMUST00000078912.5|Ampd2|ENSMUSG00000027889.11|adenosine monophosphate deaminase 2
mm10_v2_chr2_-_5063996_5064048	0.0683481	Rfx3_Rfx1_Rfx4	ENSMUST00000114996.1|Optn|ENSMUSG00000026672.5|optineurin
mm10_v2_chr1_-_164307443_164307503	0.0680847	Rfx3_Rfx1_Rfx4	ENSMUST00000027866.4|Blzf1|ENSMUSG00000026577.7|basic leucine zipper nuclear factor 1 	ENSMUST00000120447.1|Blzf1|ENSMUSG00000026577.7|basic leucine zipper nuclear factor 1 	ENSMUST00000086032.3|Blzf1|ENSMUSG00000026577.7|basic leucine zipper nuclear factor 1
mm10_v2_chr5_-_103211251_103211334	0.067393	Rfx3_Rfx1_Rfx4	ENSMUST00000060871.5|Mapk10|ENSMUSG00000046709.10|mitogen-activated protein kinase 10 	ENSMUST00000112846.1|Mapk10|ENSMUSG00000046709.10|mitogen-activated protein kinase 10 	ENSMUST00000170792.1|Mapk10|ENSMUSG00000046709.10|mitogen-activated protein kinase 10 	ENSMUST00000112847.2|Mapk10|ENSMUSG00000046709.10|mitogen-activated protein kinase 10
mm10_v2_chr10_-_128645784_128645826	0.066674	Rfx3_Rfx1_Rfx4	ENSMUST00000065334.3|Ikzf4|ENSMUSG00000002578.9|IKAROS family zinc finger 4
mm10_v2_chr15_+_82256023_82256130	0.0660655	Rfx3_Rfx1_Rfx4	ENSMUST00000143238.1|1500009C09Rik|ENSMUSG00000068099.4|RIKEN cDNA 1500009C09 gene
mm10_v2_chr7_-_92637079_92637147	0.0655647	Rfx3_Rfx1_Rfx4	ENSMUST00000056106.7|Ankrd42|ENSMUSG00000041343.12|ankyrin repeat domain 42 	ENSMUST00000118157.1|Ankrd42|ENSMUSG00000041343.12|ankyrin repeat domain 42
mm10_v2_chr2_+_29889217_29889243	0.0654403	Rfx3_Rfx1_Rfx4	ENSMUST00000123335.1|Odf2|ENSMUSG00000026790.13|outer dense fiber of sperm tails 2
mm10_v2_chr9_+_46282997_46283024	0.0640639	Rfx3_Rfx1_Rfx4	ENSMUST00000074957.3|Bud13|ENSMUSG00000032077.4|BUD13 homolog (yeast)
mm10_v2_chr18_+_77185979_77186048	0.0640438	Rfx3_Rfx1_Rfx4	ENSMUST00000075290.6|St8sia5|ENSMUSG00000025425.11|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5
mm10_v2_chr1_+_93685574_93685694	0.0638914	Rfx3_Rfx1_Rfx4	ENSMUST00000027499.6|Bok|ENSMUSG00000026278.8|BCL2-related ovarian killer protein
mm10_v2_chr8_-_83458386_83458397	0.0632066	Rfx3_Rfx1_Rfx4	ENSMUST00000081506.3|Scoc|ENSMUSG00000063253.4|short coiled-coil protein
mm10_v2_chr4_+_86930691_86930713	0.0627642	Rfx3_Rfx1_Rfx4	ENSMUST00000164590.1|Acer2|ENSMUSG00000091609.1|alkaline ceramidase 2
mm10_v2_chr3_-_36613370_36613397	0.0624753	Rfx3_Rfx1_Rfx4	ENSMUST00000040148.4|Bbs7|ENSMUSG00000037325.4|Bardet-Biedl syndrome 7 (human) 	ENSMUST00000142333.1|Bbs7|ENSMUSG00000037325.4|Bardet-Biedl syndrome 7 (human)
mm10_v2_chr7_-_141214080_141214082	0.0623134	Rfx3_Rfx1_Rfx4	ENSMUST00000026573.5|1600016N20Rik|ENSMUSG00000025500.5|RIKEN cDNA 1600016N20 gene 	ENSMUST00000170841.1|1600016N20Rik|ENSMUSG00000025500.5|RIKEN cDNA 1600016N20 gene
mm10_v2_chr11_+_70030023_70030083	0.0618151	Rfx3_Rfx1_Rfx4	ENSMUST00000143920.2|Dlg4|ENSMUSG00000020886.10|discs, large homolog 4 (Drosophila)
mm10_v2_chr17_-_36951338_36951425	0.0612469	Rfx3_Rfx1_Rfx4	ENSMUST00000173540.1|Ppp1r11|ENSMUSG00000036398.7|protein phosphatase 1, regulatory (inhibitor) subunit 11
mm10_v2_chr16_+_32419696_32419753	0.0607117	Rfx3_Rfx1_Rfx4	ENSMUST00000014220.8|Tctex1d2|ENSMUSG00000014075.9|Tctex1 domain containing 2 	ENSMUST00000080316.7|Tctex1d2|ENSMUSG00000014075.9|Tctex1 domain containing 2
mm10_v2_chr14_-_77874887_77874941	0.0605856	Rfx3_Rfx1_Rfx4	ENSMUST00000022590.3|Dnajc15|ENSMUSG00000022013.3|DnaJ (Hsp40) homolog, subfamily C, member 15
mm10_v2_chr8_+_45975514_45975558	0.0605001	Rfx3_Rfx1_Rfx4	ENSMUST00000034051.6|Ufsp2|ENSMUSG00000031634.6|UFM1-specific peptidase 2
mm10_v2_chr9_+_108569885_108569943	0.0596356	Rfx3_Rfx1_Rfx4	ENSMUST00000019183.8|Dalrd3|ENSMUSG00000019039.8|DALR anticodon binding domain containing 3
mm10_v2_chrX_-_136741155_136741352	0.0593706	Rfx3_Rfx1_Rfx4	ENSMUST00000166930.1|Morf4l2|ENSMUSG00000031422.10|mortality factor 4 like 2 	ENSMUST00000113095.1|Morf4l2|ENSMUSG00000031422.10|mortality factor 4 like 2 	ENSMUST00000155207.1|Morf4l2|ENSMUSG00000031422.10|mortality factor 4 like 2 	ENSMUST00000080411.6|Morf4l2|ENSMUSG00000031422.10|mortality factor 4 like 2 	ENSMUST00000169418.1|Morf4l2|ENSMUSG00000031422.10|mortality factor 4 like 2
mm10_v2_chr9_-_110117303_110117353	0.0593482	Rfx3_Rfx1_Rfx4	ENSMUST00000136969.1|Dhx30|ENSMUSG00000032480.11|DEAH (Asp-Glu-Ala-His) box polypeptide 30
mm10_v2_chr4_+_40722461_40722512	0.0592466	Rfx3_Rfx1_Rfx4	ENSMUST00000030118.3|Dnaja1|ENSMUSG00000028410.7|DnaJ (Hsp40) homolog, subfamily A, member 1
mm10_v2_chr9_+_59578192_59578337	0.0578403	Rfx3_Rfx1_Rfx4	ENSMUST00000118549.1|Celf6|ENSMUSG00000032297.5|CUGBP, Elav-like family member 6 	ENSMUST00000034840.3|Celf6|ENSMUSG00000032297.5|CUGBP, Elav-like family member 6
mm10_v2_chr14_-_78536854_78536879	0.0574434	Rfx3_Rfx1_Rfx4	ENSMUST00000022593.5|Akap11|ENSMUSG00000022016.9|A kinase (PRKA) anchor protein 11
mm10_v2_chr10_+_122678764_122678811	0.0572276	Rfx3_Rfx1_Rfx4	ENSMUST00000161487.1|Ppm1h|ENSMUSG00000034613.6|protein phosphatase 1H (PP2C domain containing) 	ENSMUST00000067918.5|Ppm1h|ENSMUSG00000034613.6|protein phosphatase 1H (PP2C domain containing)
mm10_v2_chr3_-_36613461_36613477	0.057212	Rfx3_Rfx1_Rfx4	ENSMUST00000108156.2|Bbs7|ENSMUSG00000037325.4|Bardet-Biedl syndrome 7 (human)
mm10_v2_chr2_+_32757234_32757319	0.0567841	Rfx3_Rfx1_Rfx4	ENSMUST00000009707.7|Tor2a|ENSMUSG00000009563.10|torsin family 2, member A 	ENSMUST00000177382.1|Tor2a|ENSMUSG00000009563.10|torsin family 2, member A 	ENSMUST00000140999.1|Tor2a|ENSMUSG00000009563.10|torsin family 2, member A
mm10_v2_chr11_-_35980473_35980579	0.0562831	Rfx3_Rfx1_Rfx4	ENSMUST00000018993.6|Wwc1|ENSMUSG00000018849.6|WW, C2 and coiled-coil domain containing 1
mm10_v2_chr4_-_121017201_121017261	0.0560117	Rfx3_Rfx1_Rfx4	ENSMUST00000043200.7|Smap2|ENSMUSG00000032870.8|small ArfGAP 2
mm10_v2_chr7_-_140882274_140882330	0.0559104	Rfx3_Rfx1_Rfx4	ENSMUST00000026559.7|Sirt3|ENSMUSG00000025486.10|sirtuin 3
mm10_v2_chr1_+_90603425_90603511	0.0552197	Rfx3_Rfx1_Rfx4	ENSMUST00000036153.5|Cops8|ENSMUSG00000034432.5|COP9 (constitutive photomorphogenic) homolog, subunit 8 (Arabidopsis thaliana)
mm10_v2_chr11_+_119229092_119229131	0.0546872	Rfx3_Rfx1_Rfx4	ENSMUST00000053440.7|Ccdc40|ENSMUSG00000039963.12|coiled-coil domain containing 40
mm10_v2_chr2_+_29060239_29060287	0.0546314	Rfx3_Rfx1_Rfx4	ENSMUST00000100237.3|Ttf1|ENSMUSG00000026803.11|transcription termination factor, RNA polymerase I
mm10_v2_chr9_-_106685653_106685674	0.0543405	Rfx3_Rfx1_Rfx4	ENSMUST00000163441.1|Tex264|ENSMUSG00000040813.9|testis expressed gene 264
mm10_v2_chr11_+_58171648_58171688	0.054313	Rfx3_Rfx1_Rfx4	ENSMUST00000020820.1|Mrpl22|ENSMUSG00000020514.2|mitochondrial ribosomal protein L22
mm10_v2_chr7_+_122067164_122067216	0.0542829	Rfx3_Rfx1_Rfx4	ENSMUST00000033158.4|Ubfd1|ENSMUSG00000030870.6|ubiquitin family domain containing 1
mm10_v2_chr1_+_179668202_179668268	0.0538915	Rfx3_Rfx1_Rfx4	ENSMUST00000040538.3|Sccpdh|ENSMUSG00000038936.7|saccharopine dehydrogenase (putative)
mm10_v2_chr4_+_152478142_152478183	0.0537511	Rfx3_Rfx1_Rfx4	ENSMUST00000081393.3|Nphp4|ENSMUSG00000039577.11|nephronophthisis 4 (juvenile) homolog (human)
mm10_v2_chr18_+_63708689_63708730	0.0536985	Rfx3_Rfx1_Rfx4	ENSMUST00000072726.5|Wdr7|ENSMUSG00000040560.9|WD repeat domain 7
mm10_v2_chr19_-_10577362_10577407	0.0531726	Rfx3_Rfx1_Rfx4	ENSMUST00000025568.2|Tmem138|ENSMUSG00000024666.5|transmembrane protein 138
mm10_v2_chr8_-_94434259_94434297	0.052815	Rfx3_Rfx1_Rfx4	ENSMUST00000180445.1|9330175E14Rik|ENSMUSG00000097194.1|RIKEN cDNA 9330175E14 gene
mm10_v2_chr5_-_136986829_136986901	0.0526924	Rfx3_Rfx1_Rfx4	ENSMUST00000034953.7|Znhit1|ENSMUSG00000059518.8|zinc finger, HIT domain containing 1 	ENSMUST00000085941.5|Znhit1|ENSMUSG00000059518.8|zinc finger, HIT domain containing 1
mm10_v2_chr1_-_171287916_171287929	0.0523255	Rfx3_Rfx1_Rfx4	ENSMUST00000111305.1|Usp21|ENSMUSG00000053483.7|ubiquitin specific peptidase 21
mm10_v2_chr12_+_69963452_69963474	0.0519209	Rfx3_Rfx1_Rfx4	ENSMUST00000110560.1|Gm3086|ENSMUSG00000079076.1|predicted gene 3086
mm10_v2_chr6_-_77979652_77979708	0.0511673	Rfx3_Rfx1_Rfx4	ENSMUST00000161846.1|Ctnna2|ENSMUSG00000063063.6|catenin (cadherin associated protein), alpha 2 	ENSMUST00000160894.1|Ctnna2|ENSMUSG00000063063.6|catenin (cadherin associated protein), alpha 2
mm10_v2_chr11_-_107337556_107337637	0.0510262	Rfx3_Rfx1_Rfx4	ENSMUST00000040380.6|Pitpnc1|ENSMUSG00000040430.12|phosphatidylinositol transfer protein, cytoplasmic 1
mm10_v2_chr19_+_3282901_3283071	0.050634	Rfx3_Rfx1_Rfx4	ENSMUST00000025745.3|Mrpl21|ENSMUSG00000024829.6|mitochondrial ribosomal protein L21 	ENSMUST00000025743.6|Mrpl21|ENSMUSG00000024829.6|mitochondrial ribosomal protein L21
mm10_v2_chr17_-_34972124_34972158	0.0505341	Rfx3_Rfx1_Rfx4	ENSMUST00000087328.2|Hspa1a|ENSMUSG00000091971.2|heat shock protein 1A 	ENSMUST00000179128.1|Hspa1a|ENSMUSG00000091971.2|heat shock protein 1A
mm10_v2_chr5_+_123252087_123252136	0.0501323	Rfx3_Rfx1_Rfx4	ENSMUST00000121964.1|Wdr66|ENSMUSG00000029442.12|WD repeat domain 66
mm10_v2_chr10_+_81606883_81607025	0.049993	Rfx3_Rfx1_Rfx4	ENSMUST00000119753.1|BC025920|ENSMUSG00000074862.5|cDNA sequence BC025920 	ENSMUST00000121138.1|BC025920|ENSMUSG00000074862.5|cDNA sequence BC025920 	ENSMUST00000099442.3|BC025920|ENSMUSG00000074862.5|cDNA sequence BC025920
mm10_v2_chr11_-_101424519_101424796	0.0497495	Rfx3_Rfx1_Rfx4	ENSMUST00000107257.1|Gm27029|ENSMUSG00000097239.1|predicted gene, 27029 	ENSMUST00000107252.2|Ptges3l|ENSMUSG00000097487.1|prostaglandin E synthase 3 (cytosolic)-like 	ENSMUST00000093933.4|Ptges3l|ENSMUSG00000097487.1|prostaglandin E synthase 3 (cytosolic)-like 	ENSMUST00000107259.3|Gm27029|ENSMUSG00000097239.1|predicted gene, 27029
mm10_v2_chr2_+_27009926_27009935	0.0492838	Rfx3_Rfx1_Rfx4	ENSMUST00000114005.2|Cacfd1|ENSMUSG00000015488.8|calcium channel flower domain containing 1 	ENSMUST00000114004.1|Cacfd1|ENSMUSG00000015488.8|calcium channel flower domain containing 1 	ENSMUST00000114006.1|Cacfd1|ENSMUSG00000015488.8|calcium channel flower domain containing 1 	ENSMUST00000114007.1|Cacfd1|ENSMUSG00000015488.8|calcium channel flower domain containing 1
mm10_v2_chr17_-_35979679_35979831	0.0489023	Rfx3_Rfx1_Rfx4	ENSMUST00000173724.1|Prr3|ENSMUSG00000038500.9|proline-rich polypeptide 3 	ENSMUST00000172900.1|Prr3|ENSMUSG00000038500.9|proline-rich polypeptide 3 	ENSMUST00000174849.1|Prr3|ENSMUSG00000038500.9|proline-rich polypeptide 3
mm10_v2_chr8_-_106337987_106337996	0.0486988	Rfx3_Rfx1_Rfx4	ENSMUST00000067512.7|Smpd3|ENSMUSG00000031906.8|sphingomyelin phosphodiesterase 3, neutral
mm10_v2_chr8_-_123212742_123212779	0.0485783	Rfx3_Rfx1_Rfx4	ENSMUST00000000759.8|Chmp1a|ENSMUSG00000000743.8|charged multivesicular body protein 1A
mm10_v2_chr10_-_128645965_128645991	0.0482412	Rfx3_Rfx1_Rfx4	ENSMUST00000133342.1|Ikzf4|ENSMUSG00000002578.9|IKAROS family zinc finger 4
mm10_v2_chr9_-_87255536_87255536	0.0481811	Rfx3_Rfx1_Rfx4	ENSMUST00000093802.4|4922501C03Rik|ENSMUSG00000056919.8|RIKEN cDNA 4922501C03 gene
mm10_v2_chr16_-_90810365_90810429	0.0476559	Rfx3_Rfx1_Rfx4	ENSMUST00000140920.1|Urb1|ENSMUSG00000039929.8|URB1 ribosome biogenesis 1 homolog (S. cerevisiae)
mm10_v2_chr1_-_124045523_124045571	0.0475675	Rfx3_Rfx1_Rfx4	ENSMUST00000112606.1|Dpp10|ENSMUSG00000036815.10|dipeptidylpeptidase 10
mm10_v2_chr8_+_124231359_124231450	0.047372	Rfx3_Rfx1_Rfx4	ENSMUST00000034458.8|Galnt2|ENSMUSG00000089704.3|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2
mm10_v2_chr13_+_59585259_59585441	0.047254	Rfx3_Rfx1_Rfx4	ENSMUST00000168367.1|Naa35|ENSMUSG00000021555.8|N(alpha)-acetyltransferase 35, NatC auxiliary subunit 	ENSMUST00000022038.7|Naa35|ENSMUSG00000021555.8|N(alpha)-acetyltransferase 35, NatC auxiliary subunit 	ENSMUST00000166923.1|Naa35|ENSMUSG00000021555.8|N(alpha)-acetyltransferase 35, NatC auxiliary subunit
mm10_v2_chrX_+_136993281_136993308	0.0471659	Rfx3_Rfx1_Rfx4	ENSMUST00000033804.4|Zcchc18|ENSMUSG00000031428.5|zinc finger, CCHC domain containing 18
mm10_v2_chr6_-_119330668_119330694	0.0471008	Rfx3_Rfx1_Rfx4	ENSMUST00000112756.1|Lrtm2|ENSMUSG00000055003.8|leucine-rich repeats and transmembrane domains 2
mm10_v2_chr5_+_135725713_135725740	0.0470709	Rfx3_Rfx1_Rfx4	ENSMUST00000127096.1|Por|ENSMUSG00000005514.8|P450 (cytochrome) oxidoreductase
mm10_v2_chr14_-_41006882_41006976	0.0468924	Rfx3_Rfx1_Rfx4	ENSMUST00000152837.1|Fam213a|ENSMUSG00000021792.9|family with sequence similarity 213, member A 	ENSMUST00000134715.1|Fam213a|ENSMUSG00000021792.9|family with sequence similarity 213, member A
mm10_v2_chr12_+_35047180_35047230	0.0468467	Rfx3_Rfx1_Rfx4	ENSMUST00000048519.9|Snx13|ENSMUSG00000020590.9|sorting nexin 13 	ENSMUST00000163677.1|Snx13|ENSMUSG00000020590.9|sorting nexin 13
mm10_v2_chr4_-_41314877_41314889	0.0468143	Rfx3_Rfx1_Rfx4	ENSMUST00000030145.8|Dcaf12|ENSMUSG00000028436.8|DDB1 and CUL4 associated factor 12
mm10_v2_chr9_-_67559703_67559703	0.0465875	Rfx3_Rfx1_Rfx4	ENSMUST00000040025.7|Tln2|ENSMUSG00000052698.8|talin 2
mm10_v2_chr8_+_72219726_72219785	0.0461452	Rfx3_Rfx1_Rfx4	ENSMUST00000003123.8|Fam32a|ENSMUSG00000003039.8|family with sequence similarity 32, member A
mm10_v2_chr6_-_119330723_119330800	0.0460875	Rfx3_Rfx1_Rfx4	ENSMUST00000068351.7|Lrtm2|ENSMUSG00000055003.8|leucine-rich repeats and transmembrane domains 2
mm10_v2_chr10_+_119992916_119992958	0.0457387	Rfx3_Rfx1_Rfx4	ENSMUST00000105261.2|Grip1|ENSMUSG00000034813.10|glutamate receptor interacting protein 1
mm10_v2_chrX_+_136590841_136590866	0.0446846	Rfx3_Rfx1_Rfx4	ENSMUST00000138047.1|Tceal3|ENSMUSG00000044550.5|transcription elongation factor A (SII)-like 3 	ENSMUST00000145648.1|Tceal3|ENSMUSG00000044550.5|transcription elongation factor A (SII)-like 3
mm10_v2_chr18_-_60713389_60713389	0.0446642	Rfx3_Rfx1_Rfx4	ENSMUST00000169273.1|Ndst1|ENSMUSG00000054008.8|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1
mm10_v2_chr15_-_76126538_76126556	0.0445305	Rfx3_Rfx1_Rfx4	ENSMUST00000054022.5|BC024139|ENSMUSG00000044361.9|cDNA sequence BC024139 	ENSMUST00000089654.3|BC024139|ENSMUSG00000044361.9|cDNA sequence BC024139
mm10_v2_chr8_+_123332676_123332740	0.0445154	Rfx3_Rfx1_Rfx4	ENSMUST00000010298.6|Spire2|ENSMUSG00000010154.6|spire homolog 2 (Drosophila)
mm10_v2_chr2_-_106970391_106970407	0.0444955	Rfx3_Rfx1_Rfx4	ENSMUST00000093883.3|Arl14ep|ENSMUSG00000027122.9|ADP-ribosylation factor-like 14 effector protein
mm10_v2_chr17_+_33955902_33955926	0.0431909	Rfx3_Rfx1_Rfx4	ENSMUST00000173196.2|Vps52|ENSMUSG00000024319.11|vacuolar protein sorting 52 (yeast)
mm10_v2_chr17_+_56717759_56717819	0.0431386	Rfx3_Rfx1_Rfx4	ENSMUST00000002452.6|Ndufa11|ENSMUSG00000002379.6|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 11
mm10_v2_chr15_+_5143861_5143896	0.0423515	Rfx3_Rfx1_Rfx4	ENSMUST00000051186.8|Prkaa1|ENSMUSG00000050697.8|protein kinase, AMP-activated, alpha 1 catalytic subunit
mm10_v2_chr11_+_48800357_48800369	0.0422619	Rfx3_Rfx1_Rfx4	ENSMUST00000020640.7|Gnb2l1|ENSMUSG00000020372.9|guanine nucleotide binding protein (G protein), beta polypeptide 2 like 1
mm10_v2_chr10_+_83722865_83722947	0.0422141	Rfx3_Rfx1_Rfx4	ENSMUST00000150459.1|1500009L16Rik|ENSMUSG00000087651.2|RIKEN cDNA 1500009L16 gene
mm10_v2_chr11_+_108425192_108425304	0.0421604	Rfx3_Rfx1_Rfx4	ENSMUST00000150863.2|Cep112|ENSMUSG00000020728.11|centrosomal protein 112 	ENSMUST00000061287.5|Cep112|ENSMUSG00000020728.11|centrosomal protein 112 	ENSMUST00000149683.2|Cep112|ENSMUSG00000020728.11|centrosomal protein 112
mm10_v2_chr9_-_59353430_59353508	0.0420643	Rfx3_Rfx1_Rfx4	ENSMUST00000026265.6|Bbs4|ENSMUSG00000025235.7|Bardet-Biedl syndrome 4 (human)
mm10_v2_chr9_+_107563246_107563285	0.0417948	Rfx3_Rfx1_Rfx4	ENSMUST00000010198.3|Tusc2|ENSMUSG00000010054.3|tumor suppressor candidate 2
mm10_v2_chr3_-_20035285_20035325	0.0416571	Rfx3_Rfx1_Rfx4	ENSMUST00000108321.1|Hps3|ENSMUSG00000027615.8|Hermansky-Pudlak syndrome 3 homolog (human) 	ENSMUST00000012580.6|Hps3|ENSMUSG00000027615.8|Hermansky-Pudlak syndrome 3 homolog (human)
mm10_v2_chr8_+_83666827_83666882	0.0416032	Rfx3_Rfx1_Rfx4	ENSMUST00000019608.5|Ptger1|ENSMUSG00000019464.5|prostaglandin E receptor 1 (subtype EP1)
mm10_v2_chr7_+_12978238_12978285	0.0409122	Rfx3_Rfx1_Rfx4	ENSMUST00000108536.1|Zfp446|ENSMUSG00000033961.9|zinc finger protein 446
mm10_v2_chr17_-_35979237_35979526	0.0407587	Rfx3_Rfx1_Rfx4	ENSMUST00000165613.2|Prr3|ENSMUSG00000038500.9|proline-rich polypeptide 3 	ENSMUST00000173872.1|Prr3|ENSMUSG00000038500.9|proline-rich polypeptide 3
mm10_v2_chr10_-_29699379_29699382	0.0406865	Rfx3_Rfx1_Rfx4	ENSMUST00000092620.4|Gm10275|ENSMUSG00000069682.4|predicted pseudogene 10275
mm10_v2_chr10_-_89732253_89732324	0.0406616	Rfx3_Rfx1_Rfx4	ENSMUST00000020109.3|Actr6|ENSMUSG00000019948.3|ARP6 actin-related protein 6
mm10_v2_chr14_-_32085595_32085639	0.040426	Rfx3_Rfx1_Rfx4	ENSMUST00000022461.4|Dph3|ENSMUSG00000021905.7|diphthamine biosynthesis 3 	ENSMUST00000067955.5|Dph3|ENSMUSG00000021905.7|diphthamine biosynthesis 3 	ENSMUST00000124303.1|Dph3|ENSMUSG00000021905.7|diphthamine biosynthesis 3 	ENSMUST00000112000.1|Dph3|ENSMUSG00000021905.7|diphthamine biosynthesis 3
mm10_v2_chr17_-_35703971_35703994	0.0401028	Rfx3_Rfx1_Rfx4	ENSMUST00000148065.1|Ddr1|ENSMUSG00000003534.11|discoidin domain receptor family, member 1
mm10_v2_chr16_+_4741543_4741592	0.0400211	Rfx3_Rfx1_Rfx4	ENSMUST00000120232.1|Hmox2|ENSMUSG00000004070.9|heme oxygenase (decycling) 2
mm10_v2_chr1_+_6730135_6730176	0.0398939	Rfx3_Rfx1_Rfx4	ENSMUST00000155921.1|St18|ENSMUSG00000033740.11|suppression of tumorigenicity 18
mm10_v2_chr2_+_144270900_144271055	0.0395533	Rfx3_Rfx1_Rfx4	ENSMUST00000028910.2|Mgme1|ENSMUSG00000027424.5|mitochondrial genome maintainance exonuclease 1 	ENSMUST00000110027.1|Mgme1|ENSMUSG00000027424.5|mitochondrial genome maintainance exonuclease 1
mm10_v2_chr6_-_29609607_29609642	0.0394558	Rfx3_Rfx1_Rfx4	ENSMUST00000115251.1|Tnpo3|ENSMUSG00000012535.8|transportin 3
mm10_v2_chr5_-_31291026_31291143	0.0391221	Rfx3_Rfx1_Rfx4	ENSMUST00000041565.7|Ift172|ENSMUSG00000038564.7|intraflagellar transport 172
mm10_v2_chr3_+_122245625_122245722	0.0382569	Rfx3_Rfx1_Rfx4	ENSMUST00000178826.1|Gclm|ENSMUSG00000028124.9|glutamate-cysteine ligase, modifier subunit
mm10_v2_chr7_-_125491397_125491413	0.0381482	Rfx3_Rfx1_Rfx4	ENSMUST00000138616.1|Nsmce1|ENSMUSG00000030750.7|non-SMC element 1 homolog (S. cerevisiae)
mm10_v2_chr6_-_29609811_29609887	0.0380395	Rfx3_Rfx1_Rfx4	ENSMUST00000012679.8|Tnpo3|ENSMUSG00000012535.8|transportin 3
mm10_v2_chr17_+_8165501_8165540	0.0371637	Rfx3_Rfx1_Rfx4	ENSMUST00000097419.3|Fgfr1op|ENSMUSG00000069135.5|Fgfr1 oncogene partner 	ENSMUST00000024636.8|Fgfr1op|ENSMUSG00000069135.5|Fgfr1 oncogene partner
mm10_v2_chr7_+_140882430_140882472	0.037126	Rfx3_Rfx1_Rfx4	ENSMUST00000164681.1|Psmd13|ENSMUSG00000025487.8|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13 	ENSMUST00000163610.1|Psmd13|ENSMUSG00000025487.8|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13
mm10_v2_chr16_-_3908639_3908689	0.0365456	Rfx3_Rfx1_Rfx4	ENSMUST00000115859.1|1700037C18Rik|ENSMUSG00000005983.9|RIKEN cDNA 1700037C18 gene
mm10_v2_chr11_-_29247208_29247409	0.0362394	Rfx3_Rfx1_Rfx4	ENSMUST00000020754.3|Ccdc104|ENSMUSG00000020462.8|coiled-coil domain containing 104
mm10_v2_chr2_+_29890063_29890081	0.036125	Rfx3_Rfx1_Rfx4	ENSMUST00000028128.6|Odf2|ENSMUSG00000026790.13|outer dense fiber of sperm tails 2
mm10_v2_chr8_+_122611618_122611663	0.0361175	Rfx3_Rfx1_Rfx4	ENSMUST00000015157.8|Trappc2l|ENSMUSG00000015013.8|trafficking protein particle complex 2-like
mm10_v2_chr12_-_110840905_110840950	0.0360611	Rfx3_Rfx1_Rfx4	ENSMUST00000177224.1|Stk30|ENSMUSG00000056458.10|serine/threonine kinase 30 	ENSMUST00000084974.4|Stk30|ENSMUSG00000056458.10|serine/threonine kinase 30 	ENSMUST00000070565.8|Stk30|ENSMUSG00000056458.10|serine/threonine kinase 30
mm10_v2_chr5_-_41708135_41708170	0.035612	Rfx3_Rfx1_Rfx4	ENSMUST00000031011.8|Rab28|ENSMUSG00000029128.9|RAB28, member RAS oncogene family
mm10_v2_chr1_-_124045247_124045267	0.0352179	Rfx3_Rfx1_Rfx4	ENSMUST00000112603.2|Dpp10|ENSMUSG00000036815.10|dipeptidylpeptidase 10
mm10_v2_chr17_+_33555719_33555796	0.0342725	Rfx3_Rfx1_Rfx4	ENSMUST00000087605.5|Myo1f|ENSMUSG00000024300.10|myosin IF 	ENSMUST00000174695.1|Myo1f|ENSMUSG00000024300.10|myosin IF
mm10_v2_chr11_-_71033462_71033513	0.033691	Rfx3_Rfx1_Rfx4	ENSMUST00000156068.2|6330403K07Rik|ENSMUSG00000018451.6|RIKEN cDNA 6330403K07 gene
mm10_v2_chr2_+_29890096_29890156	0.0336539	Rfx3_Rfx1_Rfx4	ENSMUST00000113762.1|Odf2|ENSMUSG00000026790.13|outer dense fiber of sperm tails 2 	ENSMUST00000113765.1|Odf2|ENSMUSG00000026790.13|outer dense fiber of sperm tails 2
mm10_v2_chr1_-_10232670_10232670	0.0332169	Rfx3_Rfx1_Rfx4	ENSMUST00000088615.4|Arfgef1|ENSMUSG00000067851.5|ADP-ribosylation factor guanine nucleotide-exchange factor 1(brefeldin A-inhibited) 	ENSMUST00000131556.1|Arfgef1|ENSMUSG00000067851.5|ADP-ribosylation factor guanine nucleotide-exchange factor 1(brefeldin A-inhibited)
mm10_v2_chr14_-_56778301_56778352	0.0328497	Rfx3_Rfx1_Rfx4	ENSMUST00000022507.5|Pspc1|ENSMUSG00000021938.5|paraspeckle protein 1 	ENSMUST00000163924.1|Pspc1|ENSMUSG00000021938.5|paraspeckle protein 1
mm10_v2_chr7_+_28180272_28180316	0.0325299	Rfx3_Rfx1_Rfx4	ENSMUST00000173223.1|Dyrk1b|ENSMUSG00000002409.11|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1b
mm10_v2_chr12_+_113185877_113185937	0.0323856	Rfx3_Rfx1_Rfx4	ENSMUST00000058491.6|Tmem121|ENSMUSG00000049036.6|transmembrane protein 121
mm10_v2_chr1_+_156366037_156366044	0.0319674	Rfx3_Rfx1_Rfx4	ENSMUST00000102782.3|Gm2000|ENSMUSG00000078193.2|predicted gene 2000
mm10_v2_chr8_+_20567716_20567716	0.0318579	Rfx3_Rfx1_Rfx4	ENSMUST00000178995.1|Gm21092|ENSMUSG00000095403.1|predicted gene, 21092
mm10_v2_chr9_-_59036387_59036460	0.0317143	Rfx3_Rfx1_Rfx4	ENSMUST00000068664.5|Neo1|ENSMUSG00000032340.7|neogenin
mm10_v2_chr7_+_82648595_82648653	0.03154	Rfx3_Rfx1_Rfx4	ENSMUST00000141726.1|Eftud1|ENSMUSG00000038563.7|elongation factor Tu GTP binding domain containing 1 	ENSMUST00000179489.1|Eftud1|ENSMUSG00000038563.7|elongation factor Tu GTP binding domain containing 1 	ENSMUST00000039881.3|Eftud1|ENSMUSG00000038563.7|elongation factor Tu GTP binding domain containing 1
mm10_v2_chr10_+_75893398_75893429	0.0314424	Rfx3_Rfx1_Rfx4	ENSMUST00000009236.4|Derl3|ENSMUSG00000009092.4|Der1-like domain family, member 3
mm10_v2_chr10_+_13008442_13008519	0.031118	Rfx3_Rfx1_Rfx4	ENSMUST00000105139.3|Sf3b5|ENSMUSG00000078348.3|splicing factor 3b, subunit 5
mm10_v2_chr7_+_67222544_67222635	0.030194	Rfx3_Rfx1_Rfx4	ENSMUST00000058771.5|Lysmd4|ENSMUSG00000043831.5|LysM, putative peptidoglycan-binding, domain containing 4 	ENSMUST00000179106.1|Lysmd4|ENSMUSG00000043831.5|LysM, putative peptidoglycan-binding, domain containing 4
mm10_v2_chr19_-_4283033_4283142	0.0296456	Rfx3_Rfx1_Rfx4	ENSMUST00000167215.1|Ankrd13d|ENSMUSG00000005986.9|ankyrin repeat domain 13 family, member D 	ENSMUST00000056888.6|Ankrd13d|ENSMUSG00000005986.9|ankyrin repeat domain 13 family, member D
mm10_v2_chrX_-_133898292_133898377	0.0290965	Rfx3_Rfx1_Rfx4	ENSMUST00000176718.1|Tspan6|ENSMUSG00000067377.6|tetraspanin 6 	ENSMUST00000176641.1|Tspan6|ENSMUSG00000067377.6|tetraspanin 6
mm10_v2_chr17_+_33955812_33955901	0.0282531	Rfx3_Rfx1_Rfx4	ENSMUST00000025178.9|Vps52|ENSMUSG00000024319.11|vacuolar protein sorting 52 (yeast) 	ENSMUST00000114330.2|Vps52|ENSMUSG00000024319.11|vacuolar protein sorting 52 (yeast)
mm10_v2_chr14_+_11227511_11227552	0.0279783	Rfx3_Rfx1_Rfx4	ENSMUST00000080237.3|Rpl21-ps4|ENSMUSG00000072714.1|ribosomal protein L21, pseudogene 4
mm10_v2_chr11_+_51584757_51584821	0.0277744	Rfx3_Rfx1_Rfx4	ENSMUST00000167797.1|Phykpl|ENSMUSG00000020359.7|5-phosphohydroxy-L-lysine phospholyase 	ENSMUST00000020625.6|Phykpl|ENSMUSG00000020359.7|5-phosphohydroxy-L-lysine phospholyase
mm10_v2_chr16_-_3907651_3907707	0.0276881	Rfx3_Rfx1_Rfx4	ENSMUST00000177221.1|1700037C18Rik|ENSMUSG00000005983.9|RIKEN cDNA 1700037C18 gene 	ENSMUST00000177323.1|1700037C18Rik|ENSMUSG00000005983.9|RIKEN cDNA 1700037C18 gene
mm10_v2_chr4_+_118621160_118621239	0.0272969	Rfx3_Rfx1_Rfx4	ENSMUST00000147373.1|Ebna1bp2|ENSMUSG00000028729.9|EBNA1 binding protein 2
mm10_v2_chr4_-_121215071_121215114	0.0271022	Rfx3_Rfx1_Rfx4	ENSMUST00000056635.5|Rlf|ENSMUSG00000049878.6|rearranged L-myc fusion sequence
mm10_v2_chr4_-_62208426_62208487	0.0268982	Rfx3_Rfx1_Rfx4	ENSMUST00000068822.3|Zfp37|ENSMUSG00000028389.4|zinc finger protein 37
mm10_v2_chr9_+_99575776_99575829	0.0268247	Rfx3_Rfx1_Rfx4	ENSMUST00000066650.5|Dbr1|ENSMUSG00000032469.6|debranching enzyme homolog 1 (S. cerevisiae) 	ENSMUST00000148987.1|Dbr1|ENSMUSG00000032469.6|debranching enzyme homolog 1 (S. cerevisiae)
mm10_v2_chr9_-_109059711_109059771	0.0266207	Rfx3_Rfx1_Rfx4	ENSMUST00000061973.4|Trex1|ENSMUSG00000049734.8|three prime repair exonuclease 1
mm10_v2_chr17_+_6430112_6430204	0.0264243	Rfx3_Rfx1_Rfx4	ENSMUST00000179569.1|Dynlt1b|ENSMUSG00000096255.1|dynein light chain Tctex-type 1B
mm10_v2_chr10_-_75764265_75764359	0.0263649	Rfx3_Rfx1_Rfx4	ENSMUST00000001712.6|Cabin1|ENSMUSG00000020196.9|calcineurin binding protein 1
mm10_v2_chr11_-_78536235_78536332	0.025314	Rfx3_Rfx1_Rfx4	ENSMUST00000017759.2|Tnfaip1|ENSMUSG00000017615.6|tumor necrosis factor, alpha-induced protein 1 (endothelial) 	ENSMUST00000108277.2|Tnfaip1|ENSMUSG00000017615.6|tumor necrosis factor, alpha-induced protein 1 (endothelial)
mm10_v2_chrX_-_8132770_8132857	0.0246535	Rfx3_Rfx1_Rfx4	ENSMUST00000130832.1|Wdr13|ENSMUSG00000031166.7|WD repeat domain 13 	ENSMUST00000033506.6|Wdr13|ENSMUSG00000031166.7|WD repeat domain 13 	ENSMUST00000115623.1|Wdr13|ENSMUSG00000031166.7|WD repeat domain 13 	ENSMUST00000153839.1|Wdr13|ENSMUSG00000031166.7|WD repeat domain 13
mm10_v2_chr1_-_171287931_171287991	0.023685	Rfx3_Rfx1_Rfx4	ENSMUST00000111306.3|Usp21|ENSMUSG00000053483.7|ubiquitin specific peptidase 21 	ENSMUST00000065941.5|Usp21|ENSMUSG00000053483.7|ubiquitin specific peptidase 21
mm10_v2_chr2_+_91922178_91922194	0.0235259	Rfx3_Rfx1_Rfx4	ENSMUST00000170432.1|Chrm4|ENSMUSG00000040495.3|cholinergic receptor, muscarinic 4
mm10_v2_chr18_+_53245736_53245786	0.0228124	Rfx3_Rfx1_Rfx4	ENSMUST00000025417.8|Snx24|ENSMUSG00000024535.9|sorting nexing 24
mm10_v2_chr8_+_33731867_33731946	0.0227374	Rfx3_Rfx1_Rfx4	ENSMUST00000170705.1|Gtf2e2|ENSMUSG00000031585.7|general transcription factor II E, polypeptide 2 (beta subunit)
mm10_v2_chr11_-_120467414_120467600	0.0224822	Rfx3_Rfx1_Rfx4	ENSMUST00000076921.6|Arl16|ENSMUSG00000057594.6|ADP-ribosylation factor-like 16
mm10_v2_chr16_-_43979050_43979093	0.0224739	Rfx3_Rfx1_Rfx4	ENSMUST00000165648.1|Zdhhc23|ENSMUSG00000036304.7|zinc finger, DHHC domain containing 23 	ENSMUST00000036321.7|Zdhhc23|ENSMUSG00000036304.7|zinc finger, DHHC domain containing 23
mm10_v2_chr4_-_133545906_133546011	0.0221494	Rfx3_Rfx1_Rfx4	ENSMUST00000030665.6|Nudc|ENSMUSG00000028851.6|nuclear distribution gene C homolog (Aspergillus)
mm10_v2_chr7_-_19149189_19149273	0.0221292	Rfx3_Rfx1_Rfx4	ENSMUST00000032566.1|Qpctl|ENSMUSG00000030407.1|glutaminyl-peptide cyclotransferase-like
mm10_v2_chr8_+_33732237_33732339	0.0217996	Rfx3_Rfx1_Rfx4	ENSMUST00000171010.1|Gtf2e2|ENSMUSG00000031585.7|general transcription factor II E, polypeptide 2 (beta subunit)
mm10_v2_chr7_-_80232556_80232633	0.0216943	Rfx3_Rfx1_Rfx4	ENSMUST00000071457.5|Cib1|ENSMUSG00000030538.9|calcium and integrin binding 1 (calmyrin)
mm10_v2_chr9_-_7177000_7177063	0.0216921	Rfx3_Rfx1_Rfx4	ENSMUST00000048417.6|Dync2h1|ENSMUSG00000047193.9|dynein cytoplasmic 2 heavy chain 1
mm10_v2_chr5_+_124541296_124541329	0.0213416	Rfx3_Rfx1_Rfx4	ENSMUST00000124529.1|Tmed2|ENSMUSG00000029390.7|transmembrane emp24 domain trafficking protein 2
mm10_v2_chr19_+_5041337_5041416	0.0213049	Rfx3_Rfx1_Rfx4	ENSMUST00000116567.2|Brms1|ENSMUSG00000080268.3|breast cancer metastasis-suppressor 1
mm10_v2_chr8_+_33732049_33732137	0.0212718	Rfx3_Rfx1_Rfx4	ENSMUST00000167264.1|Gtf2e2|ENSMUSG00000031585.7|general transcription factor II E, polypeptide 2 (beta subunit)
mm10_v2_chr17_-_6655939_6655939	0.0206934	Rfx3_Rfx1_Rfx4	ENSMUST00000179554.1|Dynlt1f|ENSMUSG00000095677.1|dynein light chain Tctex-type 1F
mm10_v2_chr11_-_12026732_12026823	0.0203912	Rfx3_Rfx1_Rfx4	ENSMUST00000143915.1|Grb10|ENSMUSG00000020176.11|growth factor receptor bound protein 10
mm10_v2_chr10_+_42860348_42860377	0.020239	Rfx3_Rfx1_Rfx4	ENSMUST00000063063.7|Scml4|ENSMUSG00000044770.8|sex comb on midleg-like 4 (Drosophila)
mm10_v2_chr4_+_123904832_123904851	0.0198333	Rfx3_Rfx1_Rfx4	ENSMUST00000030400.7|Mycbp|ENSMUSG00000028647.7|c-myc binding protein
mm10_v2_chr7_+_28180226_28180266	0.0193491	Rfx3_Rfx1_Rfx4	ENSMUST00000172467.1|Dyrk1b|ENSMUSG00000002409.11|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1b
mm10_v2_chr14_+_58893465_58893506	0.0189548	Rfx3_Rfx1_Rfx4	ENSMUST00000079960.1|Rpl13-ps3|ENSMUSG00000059835.1|ribosomal protein L13, pseudogene 3
mm10_v2_chr7_-_125491586_125491596	0.0189335	Rfx3_Rfx1_Rfx4	ENSMUST00000033006.7|Nsmce1|ENSMUSG00000030750.7|non-SMC element 1 homolog (S. cerevisiae)
mm10_v2_chr7_+_30232032_30232050	0.0187073	Rfx3_Rfx1_Rfx4	ENSMUST00000149654.1|Polr2i|ENSMUSG00000019738.9|polymerase (RNA) II (DNA directed) polypeptide I
mm10_v2_chr8_-_89187560_89187560	0.0185033	Rfx3_Rfx1_Rfx4	ENSMUST00000093326.2|Gm5356|ENSMUSG00000069962.2|predicted pseudogene 5356
mm10_v2_chr3_-_37312418_37312465	0.0182468	Rfx3_Rfx1_Rfx4	ENSMUST00000075537.6|Cetn4|ENSMUSG00000045031.12|centrin 4 	ENSMUST00000071400.6|Cetn4|ENSMUSG00000045031.12|centrin 4 	ENSMUST00000102955.4|Cetn4|ENSMUSG00000045031.12|centrin 4 	ENSMUST00000140956.1|Cetn4|ENSMUSG00000045031.12|centrin 4
mm10_v2_chr8_+_94667082_94667226	0.0180631	Rfx3_Rfx1_Rfx4	ENSMUST00000109527.4|Arl2bp|ENSMUSG00000031776.10|ADP-ribosylation factor-like 2 binding protein
mm10_v2_chr8_-_92356103_92356120	0.0178607	Rfx3_Rfx1_Rfx4	ENSMUST00000034183.3|4933436C20Rik|ENSMUSG00000031736.4|RIKEN cDNA 4933436C20 gene
mm10_v2_chr16_-_91728599_91728637	0.0174667	Rfx3_Rfx1_Rfx4	ENSMUST00000122254.1|Cryzl1|ENSMUSG00000058240.7|crystallin, zeta (quinone reductase)-like 1
mm10_v2_chr16_+_17619503_17619517	0.0164514	Rfx3_Rfx1_Rfx4	ENSMUST00000165092.1|Smpd4|ENSMUSG00000005899.6|sphingomyelin phosphodiesterase 4
mm10_v2_chr11_+_88047693_88047727	0.016184	Rfx3_Rfx1_Rfx4	ENSMUST00000079866.4|Srsf1|ENSMUSG00000018379.11|serine/arginine-rich splicing factor 1
mm10_v2_chr12_-_31634592_31634677	0.0154109	Rfx3_Rfx1_Rfx4	ENSMUST00000020979.7|Bcap29|ENSMUSG00000020650.8|B cell receptor associated protein 29 	ENSMUST00000177962.1|Bcap29|ENSMUSG00000020650.8|B cell receptor associated protein 29
mm10_v2_chr9_+_78051938_78051958	0.0154003	Rfx3_Rfx1_Rfx4	ENSMUST00000024104.7|Gcm1|ENSMUSG00000023333.7|glial cells missing homolog 1 (Drosophila)
mm10_v2_chr19_+_47178820_47178997	0.0147354	Rfx3_Rfx1_Rfx4	ENSMUST00000111808.3|Neurl1a|ENSMUSG00000006435.9|neuralized homolog 1A (Drosophila)
mm10_v2_chr9_+_44072196_44072211	0.0140042	Rfx3_Rfx1_Rfx4	ENSMUST00000176671.1|Usp2|ENSMUSG00000032010.8|ubiquitin specific peptidase 2
mm10_v2_chr12_+_73997749_73997817	0.0130604	Rfx3_Rfx1_Rfx4	ENSMUST00000110451.2|Syt16|ENSMUSG00000044912.9|synaptotagmin XVI
mm10_v2_chr17_-_45592262_45592411	0.0126981	Rfx3_Rfx1_Rfx4	ENSMUST00000164769.1|Slc29a1|ENSMUSG00000023942.9|solute carrier family 29 (nucleoside transporters), member 1
mm10_v2_chr18_+_77185815_77185879	0.01258	Rfx3_Rfx1_Rfx4	ENSMUST00000079618.4|St8sia5|ENSMUSG00000025425.11|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5
mm10_v2_chr8_-_85299483_85299535	0.0122867	Rfx3_Rfx1_Rfx4	ENSMUST00000034131.8|Vps35|ENSMUSG00000031696.8|vacuolar protein sorting 35
mm10_v2_chr1_+_118389058_118389058	0.0119306	Rfx3_Rfx1_Rfx4	ENSMUST00000049404.6|Clasp1|ENSMUSG00000064302.7|CLIP associating protein 1 	ENSMUST00000070989.7|Clasp1|ENSMUSG00000064302.7|CLIP associating protein 1 	ENSMUST00000165223.1|Clasp1|ENSMUSG00000064302.7|CLIP associating protein 1 	ENSMUST00000178710.1|Clasp1|ENSMUSG00000064302.7|CLIP associating protein 1
mm10_v2_chr3_+_37312514_37312575	0.0119252	Rfx3_Rfx1_Rfx4	ENSMUST00000057975.7|Bbs12|ENSMUSG00000051444.9|Bardet-Biedl syndrome 12 (human) 	ENSMUST00000108121.3|Bbs12|ENSMUSG00000051444.9|Bardet-Biedl syndrome 12 (human)
mm10_v2_chr2_-_119156824_119157034	0.0116125	Rfx3_Rfx1_Rfx4	ENSMUST00000135419.1|Rmdn3|ENSMUSG00000070730.5|regulator of microtubule dynamics 3 	ENSMUST00000129351.1|Rmdn3|ENSMUSG00000070730.5|regulator of microtubule dynamics 3 	ENSMUST00000139519.1|Rmdn3|ENSMUSG00000070730.5|regulator of microtubule dynamics 3 	ENSMUST00000094695.5|Rmdn3|ENSMUSG00000070730.5|regulator of microtubule dynamics 3
mm10_v2_chr1_+_91494631_91494698	0.0105371	Rfx3_Rfx1_Rfx4	ENSMUST00000047242.7|Traf3ip1|ENSMUSG00000034292.7|TRAF3 interacting protein 1
mm10_v2_chr4_+_117550326_117550409	0.010521	Rfx3_Rfx1_Rfx4	ENSMUST00000037127.8|Eri3|ENSMUSG00000033423.10|exoribonuclease 3
mm10_v2_chrX_+_134601271_134601286	0.01045	Rfx3_Rfx1_Rfx4	ENSMUST00000050331.6|Hnrnph2|ENSMUSG00000045427.7|heterogeneous nuclear ribonucleoprotein H2 	ENSMUST00000059297.5|Hnrnph2|ENSMUSG00000045427.7|heterogeneous nuclear ribonucleoprotein H2
mm10_v2_chr3_-_146770603_146770781	0.0100654	Rfx3_Rfx1_Rfx4	ENSMUST00000106138.1|Prkacb|ENSMUSG00000005034.9|protein kinase, cAMP dependent, catalytic, beta
mm10_v2_chr12_-_56613270_56613291	0.00943322	Rfx3_Rfx1_Rfx4	ENSMUST00000072631.5|Nkx2-9|ENSMUSG00000058669.7|NK2 homeobox 9
mm10_v2_chr9_+_82829806_82829834	0.0094086	Rfx3_Rfx1_Rfx4	ENSMUST00000113245.2|Irak1bp1|ENSMUSG00000032251.6|interleukin-1 receptor-associated kinase 1 binding protein 1 	ENSMUST00000034783.4|Irak1bp1|ENSMUSG00000032251.6|interleukin-1 receptor-associated kinase 1 binding protein 1
mm10_v2_chr13_+_24802020_24802020	0.00902783	Rfx3_Rfx1_Rfx4	ENSMUST00000155575.1|BC005537|ENSMUSG00000019132.4|cDNA sequence BC005537
mm10_v2_chrX_-_133898399_133898429	0.00901198	Rfx3_Rfx1_Rfx4	ENSMUST00000087557.5|Tspan6|ENSMUSG00000067377.6|tetraspanin 6
mm10_v2_chr4_+_6365650_6365720	0.00857235	Rfx3_Rfx1_Rfx4	ENSMUST00000029912.4|Sdcbp|ENSMUSG00000028249.9|syndecan binding protein 	ENSMUST00000103008.5|Sdcbp|ENSMUSG00000028249.9|syndecan binding protein 	ENSMUST00000175769.1|Sdcbp|ENSMUSG00000028249.9|syndecan binding protein 	ENSMUST00000108374.1|Sdcbp|ENSMUSG00000028249.9|syndecan binding protein 	ENSMUST00000140830.1|Sdcbp|ENSMUSG00000028249.9|syndecan binding protein
mm10_v2_chr4_-_155086271_155086379	0.00821888	Rfx3_Rfx1_Rfx4	ENSMUST00000030914.3|Rer1|ENSMUSG00000029048.3|RER1 retention in endoplasmic reticulum 1 homolog (S. cerevisiae)
mm10_v2_chr8_-_85555261_85555315	0.00800516	Rfx3_Rfx1_Rfx4	ENSMUST00000034138.5|Dnaja2|ENSMUSG00000031701.5|DnaJ (Hsp40) homolog, subfamily A, member 2
mm10_v2_chr16_-_36874806_36874862	0.00794203	Rfx3_Rfx1_Rfx4	ENSMUST00000075946.5|Eaf2|ENSMUSG00000022838.7|ELL associated factor 2
mm10_v2_chr3_-_34351685_34351715	0.00747317	Rfx3_Rfx1_Rfx4	ENSMUST00000174114.1|Gm20514|ENSMUSG00000092355.1|predicted gene 20514
mm10_v2_chr10_-_80900749_80900969	0.00731473	Rfx3_Rfx1_Rfx4	ENSMUST00000020440.6|Timm13|ENSMUSG00000020219.6|translocase of inner mitochondrial membrane 13
mm10_v2_chr2_+_164460945_164461018	0.0070419	Rfx3_Rfx1_Rfx4	ENSMUST00000072452.4|Sys1|ENSMUSG00000045503.10|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)
mm10_v2_chr12_-_85374696_85374719	0.00702868	Rfx3_Rfx1_Rfx4	ENSMUST00000040766.7|Tmed10|ENSMUSG00000021248.8|transmembrane emp24-like trafficking protein 10 (yeast)
mm10_v2_chr5_-_122372230_122372390	0.00608647	Rfx3_Rfx1_Rfx4	ENSMUST00000031419.5|Fam216a|ENSMUSG00000029463.5|family with sequence similarity 216, member A
mm10_v2_chr2_+_85037212_85037302	0.00601891	Rfx3_Rfx1_Rfx4	ENSMUST00000077798.6|Ssrp1|ENSMUSG00000027067.10|structure specific recognition protein 1
mm10_v2_chr8_+_105701624_105701693	0.0057356	Rfx3_Rfx1_Rfx4	ENSMUST00000093195.6|Pard6a|ENSMUSG00000005699.9|par-6 (partitioning defective 6,) homolog alpha (C. elegans)
mm10_v2_chr19_-_42086338_42086375	0.00537036	Rfx3_Rfx1_Rfx4	ENSMUST00000051772.8|Morn4|ENSMUSG00000049670.8|MORN repeat containing 4
mm10_v2_chr18_-_24020307_24020370	0.0048898	Rfx3_Rfx1_Rfx4	ENSMUST00000153337.1|Zfp191|ENSMUSG00000051469.8|zinc finger protein 191 	ENSMUST00000148525.1|Zfp191|ENSMUSG00000051469.8|zinc finger protein 191
mm10_v2_chr11_+_76407143_76407201	0.00483648	Rfx3_Rfx1_Rfx4	ENSMUST00000021203.6|Timm22|ENSMUSG00000020843.9|translocase of inner mitochondrial membrane 22 	ENSMUST00000152183.1|Timm22|ENSMUSG00000020843.9|translocase of inner mitochondrial membrane 22
mm10_v2_chr2_+_85037448_85037530	0.00409727	Rfx3_Rfx1_Rfx4	ENSMUST00000168266.1|Ssrp1|ENSMUSG00000027067.10|structure specific recognition protein 1 	ENSMUST00000130729.1|Ssrp1|ENSMUSG00000027067.10|structure specific recognition protein 1
mm10_v2_chr7_-_4684963_4684997	0.00376489	Rfx3_Rfx1_Rfx4	ENSMUST00000079970.4|Hspbp1|ENSMUSG00000063802.4|HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1
mm10_v2_chr4_-_56802265_56802331	0.00330513	Rfx3_Rfx1_Rfx4	ENSMUST00000030140.2|Ikbkap|ENSMUSG00000028431.5|inhibitor of kappa light polypeptide enhancer in B cells, kinase complex-associated protein
mm10_v2_chr9_+_104569671_104569683	0.00327604	Rfx3_Rfx1_Rfx4	ENSMUST00000057742.8|Cpne4|ENSMUSG00000032564.9|copine IV
mm10_v2_chr4_-_149774238_149774279	0.00309831	Rfx3_Rfx1_Rfx4	ENSMUST00000105686.2|Slc25a33|ENSMUSG00000028982.9|solute carrier family 25, member 33
mm10_v2_chr13_+_97137937_97138040	0.00296922	Rfx3_Rfx1_Rfx4	ENSMUST00000042084.6|Gfm2|ENSMUSG00000021666.10|G elongation factor, mitochondrial 2 	ENSMUST00000160139.1|Gfm2|ENSMUSG00000021666.10|G elongation factor, mitochondrial 2 	ENSMUST00000161639.1|Gfm2|ENSMUSG00000021666.10|G elongation factor, mitochondrial 2 	ENSMUST00000161913.1|Gfm2|ENSMUSG00000021666.10|G elongation factor, mitochondrial 2 	ENSMUST00000161825.1|Gfm2|ENSMUSG00000021666.10|G elongation factor, mitochondrial 2 	ENSMUST00000161929.1|Gfm2|ENSMUSG00000021666.10|G elongation factor, mitochondrial 2 	ENSMUST00000022170.7|Gfm2|ENSMUSG00000021666.10|G elongation factor, mitochondrial 2
mm10_v2_chr7_+_24547150_24547244	0.00244646	Rfx3_Rfx1_Rfx4	ENSMUST00000063249.8|Xrcc1|ENSMUSG00000051768.8|X-ray repair complementing defective repair in Chinese hamster cells 1
mm10_v2_chr18_+_64887690_64887762	0.00232176	Rfx3_Rfx1_Rfx4	ENSMUST00000163516.1|Nedd4l|ENSMUSG00000024589.9|neural precursor cell expressed, developmentally down-regulated gene 4-like
mm10_v2_chr17_-_45474839_45474938	0.00230833	Rfx3_Rfx1_Rfx4	ENSMUST00000024731.8|Spats1|ENSMUSG00000023935.9|spermatogenesis associated, serine-rich 1
mm10_v2_chr11_-_77725281_77725294	0.00163271	Rfx3_Rfx1_Rfx4	ENSMUST00000078623.4|Cryba1|ENSMUSG00000000724.10|crystallin, beta A1
mm10_v2_chr17_-_34627365_34627525	0.00104703	Rfx3_Rfx1_Rfx4	ENSMUST00000064953.8|Ppt2|ENSMUSG00000015474.10|palmitoyl-protein thioesterase 2 	ENSMUST00000170345.1|Ppt2|ENSMUSG00000015474.10|palmitoyl-protein thioesterase 2 	ENSMUST00000171121.2|Ppt2|ENSMUSG00000015474.10|palmitoyl-protein thioesterase 2 	ENSMUST00000168391.2|Ppt2|ENSMUSG00000015474.10|palmitoyl-protein thioesterase 2 	ENSMUST00000169067.2|Ppt2|ENSMUSG00000015474.10|palmitoyl-protein thioesterase 2
mm10_v2_chr4_-_126753372_126753440	0.000953176	Rfx3_Rfx1_Rfx4	ENSMUST00000030637.7|Ncdn|ENSMUSG00000028833.7|neurochondrin 	ENSMUST00000106116.1|Ncdn|ENSMUSG00000028833.7|neurochondrin
mm10_v2_chr4_+_126058557_126058613	0.000767937	Rfx3_Rfx1_Rfx4	ENSMUST00000035497.4|Oscp1|ENSMUSG00000042616.7|organic solute carrier partner 1
mm10_v2_chr19_-_4125837_4125863	0.000544212	Rfx3_Rfx1_Rfx4	ENSMUST00000121402.1|Aip|ENSMUSG00000024847.8|aryl-hydrocarbon receptor-interacting protein 	ENSMUST00000117831.1|Aip|ENSMUSG00000024847.8|aryl-hydrocarbon receptor-interacting protein
mm10_v2_chr2_-_168601620_168601657	0.000258858	Rfx3_Rfx1_Rfx4	ENSMUST00000171689.1|Nfatc2|ENSMUSG00000027544.10|nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 2 	ENSMUST00000137451.1|Nfatc2|ENSMUSG00000027544.10|nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 2
mm10_v2_chr8_-_95142477_95142577	0.000141939	Rfx3_Rfx1_Rfx4	ENSMUST00000034240.7|Kifc3|ENSMUSG00000031788.7|kinesin family member C3 	ENSMUST00000169748.1|Kifc3|ENSMUSG00000031788.7|kinesin family member C3
mm10_v2_chr11_+_53567361_53567526	0.000107929	Rfx3_Rfx1_Rfx4	ENSMUST00000057330.8|Kif3a|ENSMUSG00000018395.13|kinesin family member 3A 	ENSMUST00000120613.2|Kif3a|ENSMUSG00000018395.13|kinesin family member 3A 	ENSMUST00000173744.1|Kif3a|ENSMUSG00000018395.13|kinesin family member 3A 	ENSMUST00000118353.2|Kif3a|ENSMUSG00000018395.13|kinesin family member 3A
mm10_v2_chr11_+_78245743_78245821	5.22554e-05	Rfx3_Rfx1_Rfx4	ENSMUST00000002133.8|Sdf2|ENSMUSG00000002064.10|stromal cell derived factor 2
