mm10_v2_chrX_+_103422010_103422010	1.03536	Rorc_Nr1d1	ENSMUST00000182089.1|Gm26992|ENSMUSG00000098078.1|predicted gene, 26992
mm10_v2_chr17_-_24886304_24886353	0.719082	Rorc_Nr1d1	ENSMUST00000044252.5|Nubp2|ENSMUSG00000039183.5|nucleotide binding protein 2
mm10_v2_chr17_+_24886643_24886765	0.672487	Rorc_Nr1d1	ENSMUST00000117890.1|Spsb3|ENSMUSG00000024160.10|splA/ryanodine receptor domain and SOCS box containing 3 	ENSMUST00000168265.1|Spsb3|ENSMUSG00000024160.10|splA/ryanodine receptor domain and SOCS box containing 3 	ENSMUST00000120943.1|Spsb3|ENSMUSG00000024160.10|splA/ryanodine receptor domain and SOCS box containing 3 	ENSMUST00000068508.6|Spsb3|ENSMUSG00000024160.10|splA/ryanodine receptor domain and SOCS box containing 3 	ENSMUST00000119829.1|Spsb3|ENSMUSG00000024160.10|splA/ryanodine receptor domain and SOCS box containing 3
mm10_v2_chr3_-_101307079_101307079	0.539248	Rorc_Nr1d1	ENSMUST00000097146.2|Gm10355|ENSMUSG00000072381.2|predicted gene 10355
mm10_v2_chr7_-_142661858_142661880	0.505954	Rorc_Nr1d1	ENSMUST00000145896.2|Igf2|ENSMUSG00000048583.10|insulin-like growth factor 2
mm10_v2_chr1_+_6734827_6734874	0.483507	Rorc_Nr1d1	ENSMUST00000139838.1|St18|ENSMUSG00000033740.11|suppression of tumorigenicity 18
mm10_v2_chr11_+_98348404_98348434	0.384346	Rorc_Nr1d1	ENSMUST00000078694.6|Ppp1r1b|ENSMUSG00000061718.6|protein phosphatase 1, regulatory (inhibitor) subunit 1B
mm10_v2_chr11_+_94328242_94328261	0.335955	Rorc_Nr1d1	ENSMUST00000021227.5|Ankrd40|ENSMUSG00000020864.7|ankyrin repeat domain 40
mm10_v2_chr15_-_65014904_65014904	0.327201	Rorc_Nr1d1	ENSMUST00000110100.2|Gm21961|ENSMUSG00000079024.2|predicted gene, 21961
mm10_v2_chr7_+_113207465_113207595	0.313859	Rorc_Nr1d1	ENSMUST00000047321.7|Arntl|ENSMUSG00000055116.7|aryl hydrocarbon receptor nuclear translocator-like
mm10_v2_chr2_+_155751117_155751284	0.300939	Rorc_Nr1d1	ENSMUST00000029140.5|Procr|ENSMUSG00000027611.6|protein C receptor, endothelial 	ENSMUST00000132608.1|Procr|ENSMUSG00000027611.6|protein C receptor, endothelial
mm10_v2_chr7_-_142661305_142661314	0.281427	Rorc_Nr1d1	ENSMUST00000105936.1|Igf2|ENSMUSG00000048583.10|insulin-like growth factor 2
mm10_v2_chr11_+_94327984_94328029	0.280324	Rorc_Nr1d1	ENSMUST00000107818.2|Ankrd40|ENSMUSG00000020864.7|ankyrin repeat domain 40 	ENSMUST00000051221.6|Ankrd40|ENSMUSG00000020864.7|ankyrin repeat domain 40
mm10_v2_chrX_-_16911774_16911774	0.242466	Rorc_Nr1d1	ENSMUST00000040134.7|Ndp|ENSMUSG00000040138.7|Norrie disease (pseudoglioma) (human)
mm10_v2_chr17_+_33638056_33638110	0.237821	Rorc_Nr1d1	ENSMUST00000052079.7|Pram1|ENSMUSG00000032739.10|PML-RAR alpha-regulated adaptor molecule 1
mm10_v2_chr14_-_54577578_54577661	0.233306	Rorc_Nr1d1	ENSMUST00000054487.8|Ajuba|ENSMUSG00000022178.10|ajuba LIM protein
mm10_v2_chr7_-_126625676_126625676	0.226334	Rorc_Nr1d1	ENSMUST00000032961.3|Nupr1|ENSMUSG00000030717.3|nuclear protein transcription regulator 1
mm10_v2_chr7_+_45705088_45705292	0.223898	Rorc_Nr1d1	ENSMUST00000080885.3|Dbp|ENSMUSG00000059824.4|D site albumin promoter binding protein
mm10_v2_chr9_-_30922452_30922567	0.214971	Rorc_Nr1d1	ENSMUST00000065112.6|Adamts15|ENSMUSG00000033453.7|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 15
mm10_v2_chr5_+_64970069_64970089	0.212484	Rorc_Nr1d1	ENSMUST00000031080.8|Fam114a1|ENSMUSG00000029185.8|family with sequence similarity 114, member A1
mm10_v2_chr3_+_55140033_55140055	0.179496	Rorc_Nr1d1	ENSMUST00000118963.2|Ccdc169|ENSMUSG00000048655.11|coiled-coil domain containing 169 	ENSMUST00000061099.7|Ccdc169|ENSMUSG00000048655.11|coiled-coil domain containing 169 	ENSMUST00000153009.1|Ccdc169|ENSMUSG00000048655.11|coiled-coil domain containing 169
mm10_v2_chr7_-_19118357_19118404	0.175897	Rorc_Nr1d1	ENSMUST00000141380.1|Gm4969|ENSMUSG00000085601.1|predicted gene 4969
mm10_v2_chr1_+_189728264_189728326	0.171901	Rorc_Nr1d1	ENSMUST00000097442.2|Ptpn14|ENSMUSG00000026604.11|protein tyrosine phosphatase, non-receptor type 14
mm10_v2_chr16_-_44558879_44558905	0.168516	Rorc_Nr1d1	ENSMUST00000114634.1|Boc|ENSMUSG00000022687.5|biregional cell adhesion molecule-related/down-regulated by oncogenes (Cdon) binding protein
mm10_v2_chr11_+_70030023_70030083	0.167921	Rorc_Nr1d1	ENSMUST00000143920.2|Dlg4|ENSMUSG00000020886.10|discs, large homolog 4 (Drosophila)
mm10_v2_chr11_-_59290746_59290758	0.165954	Rorc_Nr1d1	ENSMUST00000010044.7|Wnt3a|ENSMUSG00000009900.7|wingless-related MMTV integration site 3A
mm10_v2_chr11_+_116198853_116198903	0.163301	Rorc_Nr1d1	ENSMUST00000021130.6|Ten1|ENSMUSG00000020778.6|TEN1 telomerase capping complex subunit
mm10_v2_chr3_-_10208569_10208586	0.159622	Rorc_Nr1d1	ENSMUST00000029041.4|Fabp4|ENSMUSG00000062515.2|fatty acid binding protein 4, adipocyte
mm10_v2_chr1_-_191907527_191907527	0.158959	Rorc_Nr1d1	ENSMUST00000069573.5|1700034H15Rik|ENSMUSG00000055833.8|RIKEN cDNA 1700034H15 gene
mm10_v2_chr2_-_5862923_5862923	0.156711	Rorc_Nr1d1	ENSMUST00000071016.2|Gm13199|ENSMUSG00000056718.2|predicted gene 13199
mm10_v2_chr7_-_126922887_126922926	0.148536	Rorc_Nr1d1	ENSMUST00000134134.1|Tmem219|ENSMUSG00000060538.8|transmembrane protein 219 	ENSMUST00000119781.1|Tmem219|ENSMUSG00000060538.8|transmembrane protein 219 	ENSMUST00000121612.2|Tmem219|ENSMUSG00000060538.8|transmembrane protein 219
mm10_v2_chr3_-_107931579_107931742	0.147803	Rorc_Nr1d1	ENSMUST00000133947.2|Gstm7|ENSMUSG00000004035.6|glutathione S-transferase, mu 7 	ENSMUST00000124215.1|Gstm7|ENSMUSG00000004035.6|glutathione S-transferase, mu 7 	ENSMUST00000106688.1|Gstm7|ENSMUSG00000004035.6|glutathione S-transferase, mu 7 	ENSMUST00000106687.2|Gstm7|ENSMUSG00000004035.6|glutathione S-transferase, mu 7
mm10_v2_chrX_-_102252154_102252181	0.146803	Rorc_Nr1d1	ENSMUST00000050551.3|Cited1|ENSMUSG00000051159.10|Cbp/p300-interacting transactivator with Glu/Asp-rich carboxy-terminal domain 1
mm10_v2_chr7_-_134232005_134232054	0.145265	Rorc_Nr1d1	ENSMUST00000134504.1|Adam12|ENSMUSG00000054555.5|a disintegrin and metallopeptidase domain 12 (meltrin alpha)
mm10_v2_chr11_+_88718442_88718645	0.144775	Rorc_Nr1d1	ENSMUST00000138007.1|C030037D09Rik|ENSMUSG00000087574.1|RIKEN cDNA C030037D09 gene
mm10_v2_chr3_+_79884496_79884571	0.137725	Rorc_Nr1d1	ENSMUST00000118853.1|Fam198b|ENSMUSG00000027955.10|family with sequence similarity 198, member B
mm10_v2_chr3_-_89764581_89764646	0.137652	Rorc_Nr1d1	ENSMUST00000029562.3|Chrnb2|ENSMUSG00000027950.3|cholinergic receptor, nicotinic, beta polypeptide 2 (neuronal)
mm10_v2_chr17_+_45686322_45686402	0.135157	Rorc_Nr1d1	ENSMUST00000024734.7|Mrpl14|ENSMUSG00000023939.7|mitochondrial ribosomal protein L14
mm10_v2_chr3_-_107931817_107931885	0.129452	Rorc_Nr1d1	ENSMUST00000004137.4|Gstm7|ENSMUSG00000004035.6|glutathione S-transferase, mu 7
mm10_v2_chr5_-_123141067_123141094	0.122611	Rorc_Nr1d1	ENSMUST00000162697.1|AI480526|ENSMUSG00000090086.1|expressed sequence AI480526 	ENSMUST00000160321.1|AI480526|ENSMUSG00000090086.1|expressed sequence AI480526 	ENSMUST00000159637.1|AI480526|ENSMUSG00000090086.1|expressed sequence AI480526
mm10_v2_chr12_-_24493656_24493656	0.121565	Rorc_Nr1d1	ENSMUST00000073088.2|Gm16372|ENSMUSG00000057160.2|predicted pseudogene 16372
mm10_v2_chr4_+_115784799_115784837	0.115048	Rorc_Nr1d1	ENSMUST00000177280.1|Atpaf1|ENSMUSG00000028710.10|ATP synthase mitochondrial F1 complex assembly factor 1 	ENSMUST00000176047.1|Atpaf1|ENSMUSG00000028710.10|ATP synthase mitochondrial F1 complex assembly factor 1 	ENSMUST00000030478.6|Atpaf1|ENSMUSG00000028710.10|ATP synthase mitochondrial F1 complex assembly factor 1
mm10_v2_chr4_+_98546919_98546973	0.114227	Rorc_Nr1d1	ENSMUST00000030290.7|Inadl|ENSMUSG00000061859.10|InaD-like (Drosophila)
mm10_v2_chr12_-_40248073_40248086	0.111194	Rorc_Nr1d1	ENSMUST00000169926.1|Ifrd1|ENSMUSG00000001627.5|interferon-related developmental regulator 1
mm10_v2_chr7_-_134232125_134232146	0.110649	Rorc_Nr1d1	ENSMUST00000127524.1|Adam12|ENSMUSG00000054555.5|a disintegrin and metallopeptidase domain 12 (meltrin alpha)
mm10_v2_chr17_+_24896488_24896530	0.109769	Rorc_Nr1d1	ENSMUST00000024978.6|Nme3|ENSMUSG00000073435.4|NME/NM23 nucleoside diphosphate kinase 3
mm10_v2_chr6_+_65778988_65779101	0.108758	Rorc_Nr1d1	ENSMUST00000031976.7|Prdm5|ENSMUSG00000029913.8|PR domain containing 5 	ENSMUST00000081219.7|Prdm5|ENSMUSG00000029913.8|PR domain containing 5 	ENSMUST00000031973.6|Prdm5|ENSMUSG00000029913.8|PR domain containing 5 	ENSMUST00000172638.1|Prdm5|ENSMUSG00000029913.8|PR domain containing 5
mm10_v2_chr17_+_37046555_37046600	0.105108	Rorc_Nr1d1	ENSMUST00000172789.1|Gabbr1|ENSMUSG00000024462.11|gamma-aminobutyric acid (GABA) B receptor, 1
mm10_v2_chr7_+_13398115_13398132	0.104346	Rorc_Nr1d1	ENSMUST00000005791.7|Cabp5|ENSMUSG00000005649.11|calcium binding protein 5
mm10_v2_chr6_+_29361410_29361461	0.100309	Rorc_Nr1d1	ENSMUST00000156163.1|Calu|ENSMUSG00000029767.10|calumenin
mm10_v2_chr14_+_73142490_73142564	0.0985081	Rorc_Nr1d1	ENSMUST00000170370.1|Rcbtb2|ENSMUSG00000022106.8|regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2 	ENSMUST00000164822.1|Rcbtb2|ENSMUSG00000022106.8|regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2 	ENSMUST00000165429.1|Rcbtb2|ENSMUSG00000022106.8|regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2
mm10_v2_chr7_-_79386943_79387027	0.0934774	Rorc_Nr1d1	ENSMUST00000053718.8|Rlbp1|ENSMUSG00000039194.9|retinaldehyde binding protein 1 	ENSMUST00000179243.1|Rlbp1|ENSMUSG00000039194.9|retinaldehyde binding protein 1
mm10_v2_chr6_-_124712131_124712178	0.0900547	Rorc_Nr1d1	ENSMUST00000004379.5|Emg1|ENSMUSG00000004268.5|EMG1 nucleolar protein homolog (S. cerevisiae)
mm10_v2_chr17_-_34628005_34628039	0.0892552	Rorc_Nr1d1	ENSMUST00000166040.2|Ppt2|ENSMUSG00000015474.10|palmitoyl-protein thioesterase 2
mm10_v2_chr15_-_66801577_66801599	0.087555	Rorc_Nr1d1	ENSMUST00000168589.1|Sla|ENSMUSG00000022372.8|src-like adaptor
mm10_v2_chr7_+_127211608_127211711	0.0832987	Rorc_Nr1d1	ENSMUST00000032910.6|Mylpf|ENSMUSG00000030672.6|myosin light chain, phosphorylatable, fast skeletal muscle
mm10_v2_chr1_+_160195215_160195303	0.0830431	Rorc_Nr1d1	ENSMUST00000135680.1|Mrps14|ENSMUSG00000058267.7|mitochondrial ribosomal protein S14 	ENSMUST00000097193.2|Mrps14|ENSMUSG00000058267.7|mitochondrial ribosomal protein S14
mm10_v2_chr13_-_52981027_52981083	0.0811578	Rorc_Nr1d1	ENSMUST00000071065.7|Nfil3|ENSMUSG00000056749.7|nuclear factor, interleukin 3, regulated
mm10_v2_chr4_+_3940747_3940854	0.0785059	Rorc_Nr1d1	ENSMUST00000119403.1|Chchd7|ENSMUSG00000042198.6|coiled-coil-helix-coiled-coil-helix domain containing 7
mm10_v2_chr11_+_68901538_68901635	0.0777029	Rorc_Nr1d1	ENSMUST00000073471.6|Rpl26|ENSMUSG00000060938.8|ribosomal protein L26 	ENSMUST00000101014.2|Rpl26|ENSMUSG00000060938.8|ribosomal protein L26 	ENSMUST00000128952.1|Rpl26|ENSMUSG00000060938.8|ribosomal protein L26 	ENSMUST00000167436.1|Rpl26|ENSMUSG00000060938.8|ribosomal protein L26
mm10_v2_chr2_-_153015331_153015427	0.0683736	Rorc_Nr1d1	ENSMUST00000028972.8|Pdrg1|ENSMUSG00000027472.8|p53 and DNA damage regulated 1
mm10_v2_chr15_+_62037986_62038061	0.0669024	Rorc_Nr1d1	ENSMUST00000182956.1|Pvt1|ENSMUSG00000097039.2|plasmacytoma variant translocation 1 	ENSMUST00000182075.1|Pvt1|ENSMUSG00000097039.2|plasmacytoma variant translocation 1 	ENSMUST00000180432.2|Pvt1|ENSMUSG00000097039.2|plasmacytoma variant translocation 1 	ENSMUST00000181416.2|Pvt1|ENSMUSG00000097039.2|plasmacytoma variant translocation 1 	ENSMUST00000181657.2|Pvt1|ENSMUSG00000097039.2|plasmacytoma variant translocation 1
mm10_v2_chr9_+_65460926_65460983	0.0666262	Rorc_Nr1d1	ENSMUST00000034955.6|Spg21|ENSMUSG00000032388.6|spastic paraplegia 21 homolog (human)
mm10_v2_chr5_+_145084100_145084109	0.0644045	Rorc_Nr1d1	ENSMUST00000124379.1|Arpc1a|ENSMUSG00000029621.8|actin related protein 2/3 complex, subunit 1A
mm10_v2_chr7_+_28693997_28694019	0.0637439	Rorc_Nr1d1	ENSMUST00000108280.1|Fbxo27|ENSMUSG00000037463.8|F-box protein 27
mm10_v2_chr15_-_10485385_10485422	0.0631862	Rorc_Nr1d1	ENSMUST00000168690.1|Brix1|ENSMUSG00000022247.6|BRX1, biogenesis of ribosomes, homolog (S. cerevisiae)
mm10_v2_chr6_-_88874045_88874070	0.0622247	Rorc_Nr1d1	ENSMUST00000038409.5|Podxl2|ENSMUSG00000033152.7|podocalyxin-like 2
mm10_v2_chr7_-_122021143_122021222	0.0598092	Rorc_Nr1d1	ENSMUST00000033160.8|Gga2|ENSMUSG00000030872.8|golgi associated, gamma adaptin ear containing, ARF binding protein 2
mm10_v2_chr10_+_57784859_57784903	0.0589352	Rorc_Nr1d1	ENSMUST00000020024.5|Fabp7|ENSMUSG00000019874.5|fatty acid binding protein 7, brain
mm10_v2_chr8_+_119862239_119862305	0.0559357	Rorc_Nr1d1	ENSMUST00000034287.8|Klhl36|ENSMUSG00000031828.8|kelch-like 36
mm10_v2_chr1_+_86703788_86703843	0.0516554	Rorc_Nr1d1	ENSMUST00000168237.1|Dis3l2|ENSMUSG00000053333.9|DIS3 mitotic control homolog (S. cerevisiae)-like 2 	ENSMUST00000065694.6|Dis3l2|ENSMUSG00000053333.9|DIS3 mitotic control homolog (S. cerevisiae)-like 2
mm10_v2_chr12_+_100110148_100110193	0.0516459	Rorc_Nr1d1	ENSMUST00000021595.8|Psmc1|ENSMUSG00000021178.8|protease (prosome, macropain) 26S subunit, ATPase 1
mm10_v2_chr11_+_3650253_3650253	0.0509764	Rorc_Nr1d1	ENSMUST00000096441.3|Morc2a|ENSMUSG00000034543.8|microrchidia 2A
mm10_v2_chr11_+_52098681_52098796	0.0504817	Rorc_Nr1d1	ENSMUST00000020608.2|Ppp2ca|ENSMUSG00000020349.4|protein phosphatase 2 (formerly 2A), catalytic subunit, alpha isoform
mm10_v2_chr5_+_145083830_145083887	0.0488831	Rorc_Nr1d1	ENSMUST00000031625.8|Arpc1a|ENSMUSG00000029621.8|actin related protein 2/3 complex, subunit 1A
mm10_v2_chr9_+_46012810_46012821	0.0485556	Rorc_Nr1d1	ENSMUST00000126865.1|Sik3|ENSMUSG00000034135.8|SIK family kinase 3
mm10_v2_chr12_-_72408934_72409054	0.0477166	Rorc_Nr1d1	ENSMUST00000078505.7|Rtn1|ENSMUSG00000021087.11|reticulon 1
mm10_v2_chr6_-_30896735_30896794	0.0475754	Rorc_Nr1d1	ENSMUST00000048774.6|Copg2|ENSMUSG00000025607.9|coatomer protein complex, subunit gamma 2 	ENSMUST00000166192.1|Copg2|ENSMUSG00000025607.9|coatomer protein complex, subunit gamma 2 	ENSMUST00000135230.1|Copg2|ENSMUSG00000025607.9|coatomer protein complex, subunit gamma 2
mm10_v2_chr7_-_126585775_126585840	0.0461454	Rorc_Nr1d1	ENSMUST00000084589.4|Cln3|ENSMUSG00000030720.10|ceroid lipofuscinosis, neuronal 3, juvenile (Batten, Spielmeyer-Vogt disease)
mm10_v2_chr15_+_81872309_81872309	0.0455042	Rorc_Nr1d1	ENSMUST00000023116.6|Aco2|ENSMUSG00000022477.6|aconitase 2, mitochondrial
mm10_v2_chr11_-_51635870_51635896	0.0426988	Rorc_Nr1d1	ENSMUST00000001081.3|Rmnd5b|ENSMUSG00000001054.3|required for meiotic nuclear division 5 homolog B (S. cerevisiae)
mm10_v2_chr17_-_34628380_34628510	0.0426796	Rorc_Nr1d1	ENSMUST00000167097.2|Ppt2|ENSMUSG00000015474.10|palmitoyl-protein thioesterase 2
mm10_v2_chr15_-_10485890_10485951	0.042489	Rorc_Nr1d1	ENSMUST00000169050.1|Brix1|ENSMUSG00000022247.6|BRX1, biogenesis of ribosomes, homolog (S. cerevisiae) 	ENSMUST00000022855.5|Brix1|ENSMUSG00000022247.6|BRX1, biogenesis of ribosomes, homolog (S. cerevisiae)
mm10_v2_chr11_-_51688614_51688669	0.0394229	Rorc_Nr1d1	ENSMUST00000007921.2|0610009B22Rik|ENSMUSG00000007777.3|RIKEN cDNA 0610009B22 gene
mm10_v2_chr15_-_81871883_81871916	0.0393374	Rorc_Nr1d1	ENSMUST00000023117.8|Phf5a|ENSMUSG00000061360.7|PHD finger protein 5A
mm10_v2_chr13_+_21495218_21495260	0.0380178	Rorc_Nr1d1	ENSMUST00000104942.1|AK157302|ENSMUSG00000078139.3|cDNA sequence AK157302
mm10_v2_chr11_+_3649759_3649759	0.0379136	Rorc_Nr1d1	ENSMUST00000140242.1|Morc2a|ENSMUSG00000034543.8|microrchidia 2A
mm10_v2_chrX_+_70385870_70385944	0.0367384	Rorc_Nr1d1	ENSMUST00000053981.5|1110012L19Rik|ENSMUSG00000045237.5|RIKEN cDNA 1110012L19 gene
mm10_v2_chr2_-_91710519_91710582	0.0366444	Rorc_Nr1d1	ENSMUST00000028678.8|Atg13|ENSMUSG00000027244.8|autophagy related 13 	ENSMUST00000076803.5|Atg13|ENSMUSG00000027244.8|autophagy related 13
mm10_v2_chrX_-_136203637_136203926	0.0354245	Rorc_Nr1d1	ENSMUST00000151592.1|Tceal5|ENSMUSG00000054034.4|transcription elongation factor A (SII)-like 5 	ENSMUST00000131510.1|Tceal5|ENSMUSG00000054034.4|transcription elongation factor A (SII)-like 5 	ENSMUST00000066819.4|Tceal5|ENSMUSG00000054034.4|transcription elongation factor A (SII)-like 5
mm10_v2_chr17_-_45686214_45686265	0.0343342	Rorc_Nr1d1	ENSMUST00000113523.2|Tmem63b|ENSMUSG00000036026.9|transmembrane protein 63b
mm10_v2_chr12_-_54695829_54695884	0.0336502	Rorc_Nr1d1	ENSMUST00000162106.1|Eapp|ENSMUSG00000054302.9|E2F-associated phosphoprotein 	ENSMUST00000160085.1|Eapp|ENSMUSG00000054302.9|E2F-associated phosphoprotein 	ENSMUST00000161592.1|Eapp|ENSMUSG00000054302.9|E2F-associated phosphoprotein 	ENSMUST00000163433.1|Eapp|ENSMUSG00000054302.9|E2F-associated phosphoprotein
mm10_v2_chr7_-_30559600_30559659	0.033483	Rorc_Nr1d1	ENSMUST00000043975.4|Lin37|ENSMUSG00000036845.6|lin-37 homolog (C. elegans) 	ENSMUST00000156241.1|Lin37|ENSMUSG00000036845.6|lin-37 homolog (C. elegans)
mm10_v2_chr3_+_90603767_90603771	0.0323972	Rorc_Nr1d1	ENSMUST00000001046.5|S100a4|ENSMUSG00000001020.7|S100 calcium binding protein A4 	ENSMUST00000107330.1|S100a4|ENSMUSG00000001020.7|S100 calcium binding protein A4
mm10_v2_chr8_-_85080679_85080746	0.0304754	Rorc_Nr1d1	ENSMUST00000093357.5|Wdr83|ENSMUSG00000005150.10|WD repeat domain containing 83
mm10_v2_chr14_-_60197173_60197185	0.029286	Rorc_Nr1d1	ENSMUST00000131670.1|Atp8a2|ENSMUSG00000021983.9|ATPase, aminophospholipid transporter-like, class I, type 8A, member 2
mm10_v2_chr11_+_40733936_40733947	0.0280544	Rorc_Nr1d1	ENSMUST00000127382.1|Nudcd2|ENSMUSG00000020328.4|NudC domain containing 2
mm10_v2_chr11_-_94653964_94653964	0.0279797	Rorc_Nr1d1	ENSMUST00000039949.4|Eme1|ENSMUSG00000039055.4|essential meiotic endonuclease 1 homolog 1 (S. pombe)
mm10_v2_chr6_+_134830145_134830179	0.0276841	Rorc_Nr1d1	ENSMUST00000046303.5|Crebl2|ENSMUSG00000032652.7|cAMP responsive element binding protein-like 2
mm10_v2_chr13_-_8871696_8871749	0.0264191	Rorc_Nr1d1	ENSMUST00000054251.6|Wdr37|ENSMUSG00000021147.10|WD repeat domain 37 	ENSMUST00000176813.1|Wdr37|ENSMUSG00000021147.10|WD repeat domain 37
mm10_v2_chr14_+_105258712_105258758	0.0239382	Rorc_Nr1d1	ENSMUST00000138283.1|Ndfip2|ENSMUSG00000053253.10|Nedd4 family interacting protein 2
mm10_v2_chr9_+_77754526_77754541	0.0231632	Rorc_Nr1d1	ENSMUST00000034905.8|Gclc|ENSMUSG00000032350.8|glutamate-cysteine ligase, catalytic subunit
mm10_v2_chr14_-_54864055_54864158	0.0218748	Rorc_Nr1d1	ENSMUST00000142283.2|Homez|ENSMUSG00000057156.9|homeodomain leucine zipper-encoding gene
mm10_v2_chr5_+_144100387_144100436	0.0215541	Rorc_Nr1d1	ENSMUST00000041804.7|Lmtk2|ENSMUSG00000038970.7|lemur tyrosine kinase 2
mm10_v2_chr11_-_98329641_98329654	0.0214741	Rorc_Nr1d1	ENSMUST00000041685.6|Neurod2|ENSMUSG00000038255.6|neurogenic differentiation 2
mm10_v2_chr15_-_11995998_11996058	0.020336	Rorc_Nr1d1	ENSMUST00000022816.8|Sub1|ENSMUSG00000022205.9|SUB1 homolog (S. cerevisiae)
mm10_v2_chr16_+_22009471_22009543	0.0194187	Rorc_Nr1d1	ENSMUST00000023561.7|Senp2|ENSMUSG00000022855.8|SUMO/sentrin specific peptidase 2
mm10_v2_chr4_+_94739276_94739300	0.0191492	Rorc_Nr1d1	ENSMUST00000073939.6|Tek|ENSMUSG00000006386.9|endothelial-specific receptor tyrosine kinase 	ENSMUST00000102798.1|Tek|ENSMUSG00000006386.9|endothelial-specific receptor tyrosine kinase
mm10_v2_chr3_-_153944425_153944452	0.01823	Rorc_Nr1d1	ENSMUST00000150070.1|Acadm|ENSMUSG00000062908.6|acyl-Coenzyme A dehydrogenase, medium chain
mm10_v2_chr3_+_90600203_90600219	0.0160915	Rorc_Nr1d1	ENSMUST00000001047.7|S100a3|ENSMUSG00000001021.8|S100 calcium binding protein A3
mm10_v2_chr15_+_10486008_10486080	0.015238	Rorc_Nr1d1	ENSMUST00000022856.8|Rad1|ENSMUSG00000022248.8|RAD1 homolog (S. pombe) 	ENSMUST00000100775.3|Rad1|ENSMUSG00000022248.8|RAD1 homolog (S. pombe) 	ENSMUST00000169519.1|Rad1|ENSMUSG00000022248.8|RAD1 homolog (S. pombe)
mm10_v2_chr7_+_114768736_114768763	0.0151183	Rorc_Nr1d1	ENSMUST00000117543.1|Insc|ENSMUSG00000048782.9|inscuteable homolog (Drosophila)
mm10_v2_chr5_-_115484297_115484387	0.010875	Rorc_Nr1d1	ENSMUST00000112067.1|Sirt4|ENSMUSG00000029524.10|sirtuin 4
mm10_v2_chr1_+_143739551_143739566	0.0108634	Rorc_Nr1d1	ENSMUST00000050491.9|Glrx2|ENSMUSG00000018196.12|glutaredoxin 2 (thioltransferase)
mm10_v2_chr5_-_122779278_122779434	0.0104412	Rorc_Nr1d1	ENSMUST00000111668.3|Camkk2|ENSMUSG00000029471.9|calcium/calmodulin-dependent protein kinase kinase 2, beta
mm10_v2_chr11_+_120673359_120673404	0.00955739	Rorc_Nr1d1	ENSMUST00000135346.1|Aspscr1|ENSMUSG00000025142.11|alveolar soft part sarcoma chromosome region, candidate 1 (human) 	ENSMUST00000127269.1|Aspscr1|ENSMUSG00000025142.11|alveolar soft part sarcoma chromosome region, candidate 1 (human) 	ENSMUST00000131727.2|Aspscr1|ENSMUSG00000025142.11|alveolar soft part sarcoma chromosome region, candidate 1 (human) 	ENSMUST00000149389.1|Aspscr1|ENSMUSG00000025142.11|alveolar soft part sarcoma chromosome region, candidate 1 (human) 	ENSMUST00000153346.1|Aspscr1|ENSMUSG00000025142.11|alveolar soft part sarcoma chromosome region, candidate 1 (human)
mm10_v2_chr2_+_91710900_91710970	0.00660921	Rorc_Nr1d1	ENSMUST00000142692.1|Harbi1|ENSMUSG00000027243.8|harbinger transposase derived 1 	ENSMUST00000090608.5|Harbi1|ENSMUSG00000027243.8|harbinger transposase derived 1
mm10_v2_chr6_-_97205549_97205642	0.00578613	Rorc_Nr1d1	ENSMUST00000164744.1|Uba3|ENSMUSG00000030061.10|ubiquitin-like modifier activating enzyme 3 	ENSMUST00000089287.5|Uba3|ENSMUSG00000030061.10|ubiquitin-like modifier activating enzyme 3
mm10_v2_chr6_+_61180313_61180400	0.00547063	Rorc_Nr1d1	ENSMUST00000126214.1|Ccser1|ENSMUSG00000039578.10|coiled-coil serine rich 1
mm10_v2_chr11_+_114890041_114890041	0.00380448	Rorc_Nr1d1	ENSMUST00000106582.2|Cd300a|ENSMUSG00000034652.6|CD300A antigen 	ENSMUST00000045151.5|Cd300a|ENSMUSG00000034652.6|CD300A antigen
mm10_v2_chr11_-_116199040_116199090	0.00196532	Rorc_Nr1d1	ENSMUST00000066587.5|Acox1|ENSMUSG00000020777.10|acyl-Coenzyme A oxidase 1, palmitoyl
mm10_v2_chr3_-_103809278_103809444	0.00192355	Rorc_Nr1d1	ENSMUST00000063502.6|Dclre1b|ENSMUSG00000027845.9|DNA cross-link repair 1B, PSO2 homolog (S. cerevisiae) 	ENSMUST00000106832.1|Dclre1b|ENSMUSG00000027845.9|DNA cross-link repair 1B, PSO2 homolog (S. cerevisiae) 	ENSMUST00000106834.1|Dclre1b|ENSMUSG00000027845.9|DNA cross-link repair 1B, PSO2 homolog (S. cerevisiae) 	ENSMUST00000029435.8|Dclre1b|ENSMUSG00000027845.9|DNA cross-link repair 1B, PSO2 homolog (S. cerevisiae)
mm10_v2_chr7_+_46033698_46033823	0.000386725	Rorc_Nr1d1	ENSMUST00000033121.6|Nomo1|ENSMUSG00000030835.6|nodal modulator 1
