mm10_v2_chr8_+_57455898_57455923	2.6006	Six6	ENSMUST00000034023.3|Scrg1|ENSMUSG00000031610.3|scrapie responsive gene 1
mm10_v2_chr10_+_24595623_24595780	1.45504	Six6	ENSMUST00000176228.1|Ctgf|ENSMUSG00000019997.5|connective tissue growth factor 	ENSMUST00000129142.1|Ctgf|ENSMUSG00000019997.5|connective tissue growth factor
mm10_v2_chr7_-_126676428_126676439	1.44256	Six6	ENSMUST00000106373.1|Sult1a1|ENSMUSG00000030711.9|sulfotransferase family 1A, phenol-preferring, member 1
mm10_v2_chr7_-_126676357_126676383	1.36189	Six6	ENSMUST00000106371.1|Sult1a1|ENSMUSG00000030711.9|sulfotransferase family 1A, phenol-preferring, member 1 	ENSMUST00000106372.3|Sult1a1|ENSMUSG00000030711.9|sulfotransferase family 1A, phenol-preferring, member 1 	ENSMUST00000155419.1|Sult1a1|ENSMUSG00000030711.9|sulfotransferase family 1A, phenol-preferring, member 1
mm10_v2_chr15_-_75894474_75894529	1.30498	Six6	ENSMUST00000023237.6|Naprt1|ENSMUSG00000022574.6|nicotinate phosphoribosyltransferase domain containing 1
mm10_v2_chr11_+_78324200_78324236	1.25935	Six6	ENSMUST00000102478.3|Aldoc|ENSMUSG00000017390.9|aldolase C, fructose-bisphosphate
mm10_v2_chrX_-_142966709_142966734	1.24807	Six6	ENSMUST00000041317.2|Ammecr1|ENSMUSG00000042225.3|Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1
mm10_v2_chr15_+_98571004_98571026	1.21664	Six6	ENSMUST00000023728.6|4930415O20Rik|ENSMUSG00000022993.6|RIKEN cDNA 4930415O20 gene
mm10_v2_chr17_+_43568269_43568303	1.20655	Six6	ENSMUST00000024706.5|Pla2g7|ENSMUSG00000023913.11|phospholipase A2, group VII (platelet-activating factor acetylhydrolase, plasma)
mm10_v2_chrX_+_169685191_169685250	1.20431	Six6	ENSMUST00000112104.1|Mid1|ENSMUSG00000035299.10|midline 1 	ENSMUST00000112107.1|Mid1|ENSMUSG00000035299.10|midline 1
mm10_v2_chr5_+_140607334_140607352	1.16165	Six6	ENSMUST00000031555.1|Lfng|ENSMUSG00000029570.1|LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
mm10_v2_chr17_+_17316078_17316078	1.07676	Six6	ENSMUST00000105311.3|Gm6712|ENSMUSG00000072761.4|predicted gene 6712
mm10_v2_chr13_+_94083490_94083511	1.07381	Six6	ENSMUST00000156071.1|Lhfpl2|ENSMUSG00000045312.5|lipoma HMGIC fusion partner-like 2
mm10_v2_chr17_+_43568641_43568676	1.06795	Six6	ENSMUST00000169694.1|Pla2g7|ENSMUSG00000023913.11|phospholipase A2, group VII (platelet-activating factor acetylhydrolase, plasma)
mm10_v2_chr19_-_11336107_11336144	1.04372	Six6	ENSMUST00000056035.2|Ms4a7|ENSMUSG00000024672.5|membrane-spanning 4-domains, subfamily A, member 7 	ENSMUST00000067532.4|Ms4a7|ENSMUSG00000024672.5|membrane-spanning 4-domains, subfamily A, member 7
mm10_v2_chr1_-_165708088_165708099	1.00901	Six6	ENSMUST00000040357.8|Rcsd1|ENSMUSG00000040723.8|RCSD domain containing 1 	ENSMUST00000097474.3|Rcsd1|ENSMUSG00000040723.8|RCSD domain containing 1
mm10_v2_chr13_+_65512678_65512678	0.931555	Six6	ENSMUST00000081471.2|Gm10139|ENSMUSG00000063905.2|predicted gene 10139
mm10_v2_chrX_+_103414461_103414481	0.889087	Six6	ENSMUST00000033691.4|Tsx|ENSMUSG00000031329.4|testis specific X-linked gene
mm10_v2_chr17_+_43568096_43568137	0.859386	Six6	ENSMUST00000167214.1|Pla2g7|ENSMUSG00000023913.11|phospholipase A2, group VII (platelet-activating factor acetylhydrolase, plasma)
mm10_v2_chr3_-_85887472_85887516	0.856136	Six6	ENSMUST00000154148.1|Arfip1|ENSMUSG00000074513.3|ADP-ribosylation factor interacting protein 1 	ENSMUST00000033643.5|Glt28d2|ENSMUSG00000031286.5|glycosyltransferase 28 domain containing 2
mm10_v2_chr3_+_88207308_88207328	0.854794	Six6	ENSMUST00000180582.1|Gm3764|ENSMUSG00000097156.1|predicted gene 3764
mm10_v2_chr4_-_43653542_43653557	0.847391	Six6	ENSMUST00000084646.4|Spag8|ENSMUSG00000066196.5|sperm associated antigen 8
mm10_v2_chr16_-_65562686_65562769	0.843723	Six6	ENSMUST00000004965.6|Chmp2b|ENSMUSG00000004843.6|charged multivesicular body protein 2B
mm10_v2_chr4_+_156013835_156013849	0.842704	Six6	ENSMUST00000030952.5|Tnfrsf4|ENSMUSG00000029075.6|tumor necrosis factor receptor superfamily, member 4
mm10_v2_chr12_+_83987854_83987898	0.828874	Six6	ENSMUST00000021649.7|Acot2|ENSMUSG00000021226.7|acyl-CoA thioesterase 2
mm10_v2_chr5_-_106926245_106926321	0.812392	Six6	ENSMUST00000117588.1|Hfm1|ENSMUSG00000043410.10|HFM1, ATP-dependent DNA helicase homolog (S. cerevisiae)
mm10_v2_chr1_+_139454747_139454825	0.808702	Six6	ENSMUST00000053364.8|Aspm|ENSMUSG00000033952.8|asp (abnormal spindle)-like, microcephaly associated (Drosophila) 	ENSMUST00000097554.3|Aspm|ENSMUSG00000033952.8|asp (abnormal spindle)-like, microcephaly associated (Drosophila)
mm10_v2_chr4_-_43653560_43653594	0.768411	Six6	ENSMUST00000107870.2|Spag8|ENSMUSG00000066196.5|sperm associated antigen 8
mm10_v2_chr13_-_56895737_56895793	0.746692	Six6	ENSMUST00000022023.6|Trpc7|ENSMUSG00000021541.7|transient receptor potential cation channel, subfamily C, member 7 	ENSMUST00000109871.1|Trpc7|ENSMUSG00000021541.7|transient receptor potential cation channel, subfamily C, member 7
mm10_v2_chrX_-_105929397_105929408	0.738699	Six6	ENSMUST00000113573.1|Atrx|ENSMUSG00000031229.10|alpha thalassemia/mental retardation syndrome X-linked homolog (human) 	ENSMUST00000130980.1|Atrx|ENSMUSG00000031229.10|alpha thalassemia/mental retardation syndrome X-linked homolog (human)
mm10_v2_chr1_+_45311538_45311638	0.730233	Six6	ENSMUST00000087883.6|Col3a1|ENSMUSG00000026043.12|collagen, type III, alpha 1
mm10_v2_chr13_-_66227573_66227573	0.707818	Six6	ENSMUST00000167981.2|Gm10772|ENSMUSG00000091347.2|predicted gene 10772
mm10_v2_chr17_+_43568475_43568493	0.684076	Six6	ENSMUST00000167418.1|Pla2g7|ENSMUSG00000023913.11|phospholipase A2, group VII (platelet-activating factor acetylhydrolase, plasma)
mm10_v2_chr5_+_21543525_21543590	0.681314	Six6	ENSMUST00000035651.4|Lrrc17|ENSMUSG00000039883.4|leucine rich repeat containing 17
mm10_v2_chr9_+_98422961_98422961	0.673486	Six6	ENSMUST00000052068.9|Rbp1|ENSMUSG00000046402.9|retinol binding protein 1, cellular
mm10_v2_chr18_+_56432116_56432163	0.671219	Six6	ENSMUST00000070166.5|Gramd3|ENSMUSG00000001700.9|GRAM domain containing 3
mm10_v2_chr17_+_57279094_57279127	0.658624	Six6	ENSMUST00000169220.2|Vav1|ENSMUSG00000034116.11|vav 1 oncogene 	ENSMUST00000005889.9|Vav1|ENSMUSG00000034116.11|vav 1 oncogene 	ENSMUST00000112870.4|Vav1|ENSMUSG00000034116.11|vav 1 oncogene
mm10_v2_chr12_+_105705970_105705987	0.63352	Six6	ENSMUST00000040876.5|Ak7|ENSMUSG00000041323.5|adenylate kinase 7
mm10_v2_chr9_-_119341390_119341420	0.570694	Six6	ENSMUST00000139870.1|Myd88|ENSMUSG00000032508.8|myeloid differentiation primary response gene 88
mm10_v2_chr13_-_66852017_66852017	0.551699	Six6	ENSMUST00000059329.6|Gm17449|ENSMUSG00000094740.1|predicted gene, 17449
mm10_v2_chr14_+_123659971_123660209	0.549666	Six6	ENSMUST00000049681.7|Itgbl1|ENSMUSG00000032925.10|integrin, beta-like 1
mm10_v2_chrM_+_2743_2761	0.545895	Six6	ENSMUST00000082392.1|mt-Nd1|ENSMUSG00000064341.1|mitochondrially encoded NADH dehydrogenase 1
mm10_v2_chr15_+_55557399_55557436	0.525522	Six6	ENSMUST00000022998.7|Mtbp|ENSMUSG00000022369.7|Mdm2, transformed 3T3 cell double minute p53 binding protein
mm10_v2_chr15_+_55112317_55112346	0.522481	Six6	ENSMUST00000096433.3|Deptor|ENSMUSG00000022419.9|DEP domain containing MTOR-interacting protein
mm10_v2_chr19_-_32196393_32196428	0.50763	Six6	ENSMUST00000151822.1|Sgms1|ENSMUSG00000040451.11|sphingomyelin synthase 1
mm10_v2_chr15_+_55557575_55557604	0.489576	Six6	ENSMUST00000170046.1|Mtbp|ENSMUSG00000022369.7|Mdm2, transformed 3T3 cell double minute p53 binding protein
mm10_v2_chr12_-_113422730_113422744	0.468167	Six6	ENSMUST00000177715.1|Ighm|ENSMUSG00000076617.3|immunoglobulin heavy constant mu 	ENSMUST00000103426.1|Ighm|ENSMUSG00000076617.3|immunoglobulin heavy constant mu
mm10_v2_chr3_+_157534103_157534160	0.463806	Six6	ENSMUST00000106058.1|Zranb2|ENSMUSG00000028180.12|zinc finger, RAN-binding domain containing 2
mm10_v2_chr1_+_97770158_97770209	0.463298	Six6	ENSMUST00000112844.3|Gin1|ENSMUSG00000026333.8|gypsy retrotransposon integrase 1 	ENSMUST00000112842.1|Gin1|ENSMUSG00000026333.8|gypsy retrotransposon integrase 1 	ENSMUST00000027571.6|Gin1|ENSMUSG00000026333.8|gypsy retrotransposon integrase 1
mm10_v2_chr9_+_72958785_72958850	0.458048	Six6	ENSMUST00000098567.2|Dyx1c1|ENSMUSG00000092192.1|dyslexia susceptibility 1 candidate 1 homolog (human) 	ENSMUST00000034734.8|Dyx1c1|ENSMUSG00000092192.1|dyslexia susceptibility 1 candidate 1 homolog (human)
mm10_v2_chr2_+_127336152_127336166	0.445775	Six6	ENSMUST00000028846.6|Dusp2|ENSMUSG00000027368.6|dual specificity phosphatase 2
mm10_v2_chr7_+_110627650_110627669	0.443284	Six6	ENSMUST00000033054.8|Adm|ENSMUSG00000030790.8|adrenomedullin
mm10_v2_chr7_-_104315455_104315463	0.432731	Six6	ENSMUST00000106837.1|Trim12a|ENSMUSG00000066258.7|tripartite motif-containing 12A 	ENSMUST00000106839.2|Trim12a|ENSMUSG00000066258.7|tripartite motif-containing 12A 	ENSMUST00000070943.6|Trim12a|ENSMUSG00000066258.7|tripartite motif-containing 12A
mm10_v2_chrX_-_73659724_73659877	0.40555	Six6	ENSMUST00000114473.1|Pnck|ENSMUSG00000002012.7|pregnancy upregulated non-ubiquitously expressed CaM kinase 	ENSMUST00000002087.7|Pnck|ENSMUSG00000002012.7|pregnancy upregulated non-ubiquitously expressed CaM kinase
mm10_v2_chr5_+_122210134_122210295	0.403277	Six6	ENSMUST00000100747.2|Hvcn1|ENSMUSG00000064267.7|hydrogen voltage-gated channel 1
mm10_v2_chr17_+_35241838_35241870	0.40104	Six6	ENSMUST00000173731.1|Ddx39b|ENSMUSG00000019432.9|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B
mm10_v2_chr15_-_82244716_82244755	0.386469	Six6	ENSMUST00000089155.4|Cenpm|ENSMUSG00000068101.4|centromere protein M 	ENSMUST00000089157.3|Cenpm|ENSMUSG00000068101.4|centromere protein M
mm10_v2_chr1_+_74713551_74713574	0.386002	Six6	ENSMUST00000027356.5|Cyp27a1|ENSMUSG00000026170.5|cytochrome P450, family 27, subfamily a, polypeptide 1
mm10_v2_chr9_-_103228420_103228442	0.381678	Six6	ENSMUST00000126359.1|Trf|ENSMUSG00000032554.9|transferrin
mm10_v2_chr1_-_128359610_128359698	0.376067	Six6	ENSMUST00000027601.4|Mcm6|ENSMUSG00000026355.5|minichromosome maintenance deficient 6 (MIS5 homolog, S. pombe) (S. cerevisiae)
mm10_v2_chr6_+_48537560_48537622	0.372579	Six6	ENSMUST00000040361.5|Atp6v0e2|ENSMUSG00000039347.5|ATPase, H+ transporting, lysosomal V0 subunit E2
mm10_v2_chr16_+_84774123_84774174	0.372097	Six6	ENSMUST00000114195.1|Jam2|ENSMUSG00000053062.9|junction adhesion molecule 2
mm10_v2_chr9_+_104002546_104002776	0.357052	Six6	ENSMUST00000035167.8|Nphp3|ENSMUSG00000032558.12|nephronophthisis 3 (adolescent) 	ENSMUST00000117054.1|Nphp3|ENSMUSG00000032558.12|nephronophthisis 3 (adolescent)
mm10_v2_chr19_+_4154606_4154629	0.356975	Six6	ENSMUST00000061086.8|Ptprcap|ENSMUSG00000045826.8|protein tyrosine phosphatase, receptor type, C polypeptide-associated protein
mm10_v2_chr17_+_40811089_40811133	0.332447	Six6	ENSMUST00000024721.7|Rhag|ENSMUSG00000023926.7|Rhesus blood group-associated A glycoprotein
mm10_v2_chr17_+_35241746_35241778	0.331475	Six6	ENSMUST00000068056.5|Ddx39b|ENSMUSG00000019432.9|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B 	ENSMUST00000174757.1|Ddx39b|ENSMUSG00000019432.9|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B
mm10_v2_chr3_-_85722474_85722474	0.329007	Six6	ENSMUST00000119077.1|Fam160a1|ENSMUSG00000051000.11|family with sequence similarity 160, member A1
mm10_v2_chr8_+_85026833_85026899	0.311069	Six6	ENSMUST00000047281.8|2310036O22Rik|ENSMUSG00000041203.8|RIKEN cDNA 2310036O22 gene
mm10_v2_chr7_+_127800844_127800941	0.30999	Six6	ENSMUST00000106271.1|Hsd3b7|ENSMUSG00000042289.5|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7 	ENSMUST00000138432.1|Hsd3b7|ENSMUSG00000042289.5|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7
mm10_v2_chr12_+_84773262_84773319	0.307918	Six6	ENSMUST00000021667.5|Isca2|ENSMUSG00000021241.6|iron-sulfur cluster assembly 2 homolog (S. cerevisiae)
mm10_v2_chr1_-_118982551_118982606	0.305324	Six6	ENSMUST00000159678.1|Gli2|ENSMUSG00000048402.8|GLI-Kruppel family member GLI2
mm10_v2_chr7_+_82611777_82611777	0.301769	Six6	ENSMUST00000172784.1|Adamtsl3|ENSMUSG00000070469.5|ADAMTS-like 3
mm10_v2_chr4_+_11758147_11758220	0.293868	Six6	ENSMUST00000029871.5|Cdh17|ENSMUSG00000028217.5|cadherin 17 	ENSMUST00000108303.1|Cdh17|ENSMUSG00000028217.5|cadherin 17
mm10_v2_chr5_+_90903864_90903899	0.287582	Six6	ENSMUST00000075433.6|Cxcl2|ENSMUSG00000058427.7|chemokine (C-X-C motif) ligand 2
mm10_v2_chr16_+_10835046_10835084	0.285229	Six6	ENSMUST00000037913.8|Rmi2|ENSMUSG00000037991.9|RMI2, RecQ mediated genome instability 2, homolog (S. cerevisiae)
mm10_v2_chr10_+_73821857_73821883	0.280674	Six6	ENSMUST00000177128.1|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000064562.7|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000129404.2|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000105426.3|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000131321.2|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000126920.2|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000147189.2|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000105424.3|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000092420.6|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000105429.3|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000131724.2|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000152655.2|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000151116.2|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000155701.2|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000152819.2|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000125517.2|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000124046.1|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000149977.2|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000146682.1|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000177107.1|Pcdh15|ENSMUSG00000052613.10|protocadherin 15
mm10_v2_chr8_-_94918012_94918098	0.276646	Six6	ENSMUST00000077955.5|Ccdc102a|ENSMUSG00000063605.5|coiled-coil domain containing 102A
mm10_v2_chr2_-_127482499_127482577	0.275414	Six6	ENSMUST00000088538.5|Kcnip3|ENSMUSG00000079056.6|Kv channel interacting protein 3, calsenilin
mm10_v2_chr19_-_4625612_4625658	0.273544	Six6	ENSMUST00000025823.3|Rce1|ENSMUSG00000024889.3|RCE1 homolog, prenyl protein peptidase (S. cerevisiae)
mm10_v2_chr5_-_148371525_148371546	0.266976	Six6	ENSMUST00000138596.1|Slc7a1|ENSMUSG00000041313.8|solute carrier family 7 (cationic amino acid transporter, y+ system), member 1
mm10_v2_chr3_-_158016419_158016453	0.258852	Six6	ENSMUST00000127778.1|Srsf11|ENSMUSG00000055436.12|serine/arginine-rich splicing factor 11
mm10_v2_chr9_-_50528641_50528698	0.250255	Six6	ENSMUST00000034570.5|Pts|ENSMUSG00000032067.5|6-pyruvoyl-tetrahydropterin synthase
mm10_v2_chr7_-_141168671_141168936	0.249511	Six6	ENSMUST00000106033.3|Rnh1|ENSMUSG00000038650.8|ribonuclease/angiogenin inhibitor 1
mm10_v2_chr7_+_123123870_123123901	0.245251	Six6	ENSMUST00000094053.5|Tnrc6a|ENSMUSG00000052707.7|trinucleotide repeat containing 6a
mm10_v2_chr2_+_131491764_131491943	0.238078	Six6	ENSMUST00000028806.5|Smox|ENSMUSG00000027333.12|spermine oxidase 	ENSMUST00000110179.2|Smox|ENSMUSG00000027333.12|spermine oxidase 	ENSMUST00000110189.2|Smox|ENSMUSG00000027333.12|spermine oxidase 	ENSMUST00000110182.2|Smox|ENSMUSG00000027333.12|spermine oxidase 	ENSMUST00000110183.2|Smox|ENSMUSG00000027333.12|spermine oxidase 	ENSMUST00000110186.2|Smox|ENSMUSG00000027333.12|spermine oxidase 	ENSMUST00000110188.1|Smox|ENSMUSG00000027333.12|spermine oxidase
mm10_v2_chr16_+_11203375_11203448	0.236743	Six6	ENSMUST00000181526.1|2610020C07Rik|ENSMUSG00000097537.1|RIKEN cDNA 2610020C07 gene
mm10_v2_chr5_+_117319258_117319284	0.236141	Six6	ENSMUST00000111967.1|Vsig10|ENSMUSG00000066894.8|V-set and immunoglobulin domain containing 10
mm10_v2_chr8_+_69832633_69832712	0.235699	Six6	ENSMUST00000131637.2|Pbx4|ENSMUSG00000031860.11|pre B cell leukemia homeobox 4 	ENSMUST00000081503.6|Pbx4|ENSMUSG00000031860.11|pre B cell leukemia homeobox 4
mm10_v2_chrX_-_12673540_12673668	0.23462	Six6	ENSMUST00000060108.6|1810030O07Rik|ENSMUSG00000044148.6|RIKEN cDNA 1810030O07 gene
mm10_v2_chr7_+_27591513_27591562	0.228649	Six6	ENSMUST00000108344.2|Akt2|ENSMUSG00000004056.9|thymoma viral proto-oncogene 2
mm10_v2_chr11_+_60353324_60353408	0.225927	Six6	ENSMUST00000070805.6|Lrrc48|ENSMUSG00000056598.10|leucine rich repeat containing 48 	ENSMUST00000094140.2|Lrrc48|ENSMUSG00000056598.10|leucine rich repeat containing 48 	ENSMUST00000108723.2|Lrrc48|ENSMUSG00000056598.10|leucine rich repeat containing 48 	ENSMUST00000108722.4|Lrrc48|ENSMUSG00000056598.10|leucine rich repeat containing 48
mm10_v2_chr8_-_4275886_4275915	0.224095	Six6	ENSMUST00000003029.7|Timm44|ENSMUSG00000002949.8|translocase of inner mitochondrial membrane 44
mm10_v2_chr13_-_66851513_66851513	0.218525	Six6	ENSMUST00000169322.1|Gm17404|ENSMUSG00000095206.1|predicted gene, 17404
mm10_v2_chr12_+_8921598_8921671	0.211585	Six6	ENSMUST00000020909.3|Laptm4a|ENSMUSG00000020585.4|lysosomal-associated protein transmembrane 4A
mm10_v2_chr4_-_24851079_24851124	0.208331	Six6	ENSMUST00000084781.5|Klhl32|ENSMUSG00000040387.10|kelch-like 32 	ENSMUST00000108218.3|Klhl32|ENSMUSG00000040387.10|kelch-like 32
mm10_v2_chr1_-_165634451_165634576	0.20383	Six6	ENSMUST00000111435.2|Mpzl1|ENSMUSG00000026566.9|myelin protein zero-like 1 	ENSMUST00000068705.7|Mpzl1|ENSMUSG00000026566.9|myelin protein zero-like 1
mm10_v2_chr6_+_17743582_17743593	0.195726	Six6	ENSMUST00000000674.6|St7|ENSMUSG00000029534.11|suppression of tumorigenicity 7 	ENSMUST00000077080.2|St7|ENSMUSG00000029534.11|suppression of tumorigenicity 7
mm10_v2_chr2_-_180824596_180824630	0.191084	Six6	ENSMUST00000148700.1|Gm14340|ENSMUSG00000074507.6|predicted gene 14340
mm10_v2_chr11_-_11627824_11627824	0.190247	Six6	ENSMUST00000081896.4|4930512M02Rik|ENSMUSG00000062511.6|RIKEN cDNA 4930512M02 gene
mm10_v2_chr3_+_94398517_94398538	0.18741	Six6	ENSMUST00000050975.3|Lingo4|ENSMUSG00000044505.3|leucine rich repeat and Ig domain containing 4
mm10_v2_chr11_+_100319880_100319905	0.185357	Six6	ENSMUST00000049385.7|Eif1|ENSMUSG00000035530.7|eukaryotic translation initiation factor 1
mm10_v2_chr7_-_42578588_42578588	0.179041	Six6	ENSMUST00000179470.1|Gm21028|ENSMUSG00000094462.1|predicted gene, 21028
mm10_v2_chr4_-_42084291_42084291	0.173638	Six6	ENSMUST00000177937.1|Gm21968|ENSMUSG00000095881.1|predicted gene, 21968
mm10_v2_chr8_+_61487715_61487751	0.172354	Six6	ENSMUST00000034058.6|Cbr4|ENSMUSG00000031641.7|carbonyl reductase 4 	ENSMUST00000126575.1|Cbr4|ENSMUSG00000031641.7|carbonyl reductase 4
mm10_v2_chr8_+_34115030_34115030	0.16271	Six6	ENSMUST00000095345.3|Mboat4|ENSMUSG00000071113.3|membrane bound O-acyltransferase domain containing 4
mm10_v2_chr11_+_98412461_98412566	0.161945	Six6	ENSMUST00000058295.5|Erbb2|ENSMUSG00000062312.5|v-erb-b2 erythroblastic leukemia viral oncogene homolog 2, neuro/glioblastoma derived oncogene homolog (avian)
mm10_v2_chr17_-_56717681_56717709	0.159072	Six6	ENSMUST00000164907.1|Vmac|ENSMUSG00000054723.5|vimentin-type intermediate filament associated coiled-coil protein
mm10_v2_chr11_-_60417022_60417056	0.157812	Six6	ENSMUST00000108721.1|Atpaf2|ENSMUSG00000042709.8|ATP synthase mitochondrial F1 complex assembly factor 2
mm10_v2_chr16_-_18876655_18876767	0.153757	Six6	ENSMUST00000023391.8|Mrpl40|ENSMUSG00000022706.9|mitochondrial ribosomal protein L40
mm10_v2_chr3_-_37724321_37724490	0.152161	Six6	ENSMUST00000108105.1|Gm5148|ENSMUSG00000058174.7|predicted gene 5148 	ENSMUST00000079755.4|Gm5148|ENSMUSG00000058174.7|predicted gene 5148 	ENSMUST00000099128.1|Gm5148|ENSMUSG00000058174.7|predicted gene 5148
mm10_v2_chr11_+_115564434_115564490	0.150922	Six6	ENSMUST00000021085.4|Nup85|ENSMUSG00000020739.5|nucleoporin 85
mm10_v2_chr4_-_97584612_97584643	0.143576	Six6	ENSMUST00000107068.2|E130114P18Rik|ENSMUSG00000048747.8|RIKEN cDNA E130114P18 gene
mm10_v2_chr11_-_106272927_106273006	0.142216	Six6	ENSMUST00000021052.9|Smarcd2|ENSMUSG00000078619.4|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2
mm10_v2_chr15_-_76206309_76206357	0.141011	Six6	ENSMUST00000073418.6|Plec|ENSMUSG00000022565.9|plectin 	ENSMUST00000171634.1|Plec|ENSMUSG00000022565.9|plectin 	ENSMUST00000076442.5|Plec|ENSMUSG00000022565.9|plectin
mm10_v2_chr9_+_119341487_119341515	0.139482	Six6	ENSMUST00000175743.1|Acaa1a|ENSMUSG00000036138.10|acetyl-Coenzyme A acyltransferase 1A 	ENSMUST00000176397.1|Acaa1a|ENSMUSG00000036138.10|acetyl-Coenzyme A acyltransferase 1A
mm10_v2_chr18_+_12599894_12599926	0.135422	Six6	ENSMUST00000169401.1|Ttc39c|ENSMUSG00000024424.8|tetratricopeptide repeat domain 39C
mm10_v2_chr5_+_144244432_144244457	0.135025	Six6	ENSMUST00000110695.1|Bri3|ENSMUSG00000047843.10|brain protein I3
mm10_v2_chr2_-_13271268_13271348	0.134204	Six6	ENSMUST00000137670.1|Rsu1|ENSMUSG00000026727.4|Ras suppressor protein 1 	ENSMUST00000114791.2|Rsu1|ENSMUSG00000026727.4|Ras suppressor protein 1
mm10_v2_chrX_-_105929333_105929382	0.134114	Six6	ENSMUST00000134507.1|Atrx|ENSMUSG00000031229.10|alpha thalassemia/mental retardation syndrome X-linked homolog (human) 	ENSMUST00000137453.1|Atrx|ENSMUSG00000031229.10|alpha thalassemia/mental retardation syndrome X-linked homolog (human) 	ENSMUST00000150914.1|Atrx|ENSMUSG00000031229.10|alpha thalassemia/mental retardation syndrome X-linked homolog (human)
mm10_v2_chr3_-_95133989_95134017	0.133754	Six6	ENSMUST00000172572.2|Scnm1|ENSMUSG00000092607.3|sodium channel modifier 1 	ENSMUST00000173462.2|Scnm1|ENSMUSG00000092607.3|sodium channel modifier 1
mm10_v2_chr18_+_74216118_74216145	0.129154	Six6	ENSMUST00000025444.6|Cxxc1|ENSMUSG00000024560.6|CXXC finger 1 (PHD domain)
mm10_v2_chr7_-_130547358_130547386	0.12726	Six6	ENSMUST00000160289.1|Nsmce4a|ENSMUSG00000040331.9|non-SMC element 4 homolog A (S. cerevisiae)
mm10_v2_chr15_-_79742518_79742562	0.126712	Six6	ENSMUST00000089311.4|Sun2|ENSMUSG00000042524.7|Sad1 and UNC84 domain containing 2 	ENSMUST00000046259.7|Sun2|ENSMUSG00000042524.7|Sad1 and UNC84 domain containing 2
mm10_v2_chr4_+_42158092_42158092	0.123952	Six6	ENSMUST00000098122.2|Gm13306|ENSMUSG00000073877.4|predicted gene 13306
mm10_v2_chr4_-_97584605_97584610	0.122779	Six6	ENSMUST00000107067.1|E130114P18Rik|ENSMUSG00000048747.8|RIKEN cDNA E130114P18 gene
mm10_v2_chr5_-_88527841_88527891	0.120719	Six6	ENSMUST00000087033.3|Igj|ENSMUSG00000067149.3|immunoglobulin joining chain
mm10_v2_chr3_-_9004686_9004750	0.112743	Six6	ENSMUST00000120143.1|Tpd52|ENSMUSG00000027506.9|tumor protein D52
mm10_v2_chr7_+_44590886_44590905	0.107483	Six6	ENSMUST00000107906.3|Kcnc3|ENSMUSG00000062785.7|potassium voltage gated channel, Shaw-related subfamily, member 3
mm10_v2_chr5_+_123907175_123907292	0.106523	Six6	ENSMUST00000023869.8|Denr|ENSMUSG00000023106.9|density-regulated protein
mm10_v2_chr9_-_88438898_88438936	0.105495	Six6	ENSMUST00000173011.1|Snx14|ENSMUSG00000032422.11|sorting nexin 14 	ENSMUST00000174806.1|Snx14|ENSMUSG00000032422.11|sorting nexin 14
mm10_v2_chr9_-_88438940_88438958	0.104918	Six6	ENSMUST00000165315.1|Snx14|ENSMUSG00000032422.11|sorting nexin 14 	ENSMUST00000173039.1|Snx14|ENSMUSG00000032422.11|sorting nexin 14
mm10_v2_chr16_-_31275277_31275290	0.102604	Six6	ENSMUST00000060188.7|Ppp1r2|ENSMUSG00000047714.8|protein phosphatase 1, regulatory (inhibitor) subunit 2
mm10_v2_chr11_+_58104229_58104366	0.0993908	Six6	ENSMUST00000108843.1|Cnot8|ENSMUSG00000020515.7|CCR4-NOT transcription complex, subunit 8 	ENSMUST00000134896.1|Cnot8|ENSMUSG00000020515.7|CCR4-NOT transcription complex, subunit 8
mm10_v2_chr7_-_101903783_101903786	0.0990736	Six6	ENSMUST00000106969.1|Tomt|ENSMUSG00000078630.1|transmembrane O-methyltransferase
mm10_v2_chrX_-_105929206_105929321	0.0982424	Six6	ENSMUST00000134381.1|Atrx|ENSMUSG00000031229.10|alpha thalassemia/mental retardation syndrome X-linked homolog (human) 	ENSMUST00000154866.1|Atrx|ENSMUSG00000031229.10|alpha thalassemia/mental retardation syndrome X-linked homolog (human)
mm10_v2_chr17_-_27909206_27909264	0.0976616	Six6	ENSMUST00000114848.1|Taf11|ENSMUSG00000024218.6|TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor
mm10_v2_chr19_-_5729618_5729700	0.0955002	Six6	ENSMUST00000116558.2|Fam89b|ENSMUSG00000024939.6|family with sequence similarity 89, member B 	ENSMUST00000099955.3|Fam89b|ENSMUSG00000024939.6|family with sequence similarity 89, member B 	ENSMUST00000161368.1|Fam89b|ENSMUSG00000024939.6|family with sequence similarity 89, member B
mm10_v2_chr10_+_80603253_80603297	0.094691	Six6	ENSMUST00000180350.1|Scamp4|ENSMUSG00000078441.4|secretory carrier membrane protein 4
mm10_v2_chr2_-_13271419_13271437	0.0924611	Six6	ENSMUST00000028059.2|Rsu1|ENSMUSG00000026727.4|Ras suppressor protein 1
mm10_v2_chr1_-_56978534_56978650	0.0867636	Six6	ENSMUST00000177282.1|Satb2|ENSMUSG00000038331.9|special AT-rich sequence binding protein 2
mm10_v2_chr6_-_8259098_8259173	0.0846343	Six6	ENSMUST00000012627.4|Rpa3|ENSMUSG00000012483.4|replication protein A3
mm10_v2_chrX_+_159627265_159627298	0.0782409	Six6	ENSMUST00000112456.2|Sh3kbp1|ENSMUSG00000040990.11|SH3-domain kinase binding protein 1
mm10_v2_chr7_-_35647127_35647209	0.0760255	Six6	ENSMUST00000120714.1|Pdcd5|ENSMUSG00000030417.9|programmed cell death 5
mm10_v2_chr17_-_53539411_53539459	0.0726828	Six6	ENSMUST00000056198.3|Pp2d1|ENSMUSG00000044957.3|protein phosphatase 2C-like domain containing 1
mm10_v2_chr11_+_58104138_58104191	0.0690362	Six6	ENSMUST00000020822.5|Cnot8|ENSMUSG00000020515.7|CCR4-NOT transcription complex, subunit 8
mm10_v2_chr17_-_62606679_62606707	0.0669056	Six6	ENSMUST00000163332.1|Efna5|ENSMUSG00000090425.1|ephrin A5
mm10_v2_chr11_-_87826023_87826113	0.0647881	Six6	ENSMUST00000103177.3|Lpo|ENSMUSG00000009356.6|lactoperoxidase
mm10_v2_chr7_+_81762925_81762943	0.06187	Six6	ENSMUST00000042166.4|Fam103a1|ENSMUSG00000038646.7|family with sequence similarity 103, member A1
mm10_v2_chr17_-_23771543_23771595	0.0540477	Six6	ENSMUST00000086325.5|Flywch1|ENSMUSG00000040097.9|FLYWCH-type zinc finger 1
mm10_v2_chr5_-_31154152_31154253	0.0488222	Six6	ENSMUST00000114632.1|Mpv17|ENSMUSG00000090262.1|MpV17 mitochondrial inner membrane protein 	ENSMUST00000114631.2|Mpv17|ENSMUSG00000090262.1|MpV17 mitochondrial inner membrane protein 	ENSMUST00000067186.6|Mpv17|ENSMUSG00000090262.1|MpV17 mitochondrial inner membrane protein 	ENSMUST00000137165.1|Mpv17|ENSMUSG00000090262.1|MpV17 mitochondrial inner membrane protein 	ENSMUST00000131391.1|Mpv17|ENSMUSG00000090262.1|MpV17 mitochondrial inner membrane protein 	ENSMUST00000141823.1|Mpv17|ENSMUSG00000090262.1|MpV17 mitochondrial inner membrane protein 	ENSMUST00000154241.1|Mpv17|ENSMUSG00000090262.1|MpV17 mitochondrial inner membrane protein
mm10_v2_chr9_+_58582397_58582436	0.044432	Six6	ENSMUST00000176557.1|Nptn|ENSMUSG00000032336.11|neuroplastin 	ENSMUST00000114121.4|Nptn|ENSMUSG00000032336.11|neuroplastin 	ENSMUST00000177064.1|Nptn|ENSMUSG00000032336.11|neuroplastin
mm10_v2_chr8_+_105373265_105373277	0.041122	Six6	ENSMUST00000160650.1|Plekhg4|ENSMUSG00000014782.9|pleckstrin homology domain containing, family G (with RhoGef domain) member 4
mm10_v2_chr7_+_30231884_30231948	0.0336977	Six6	ENSMUST00000019882.9|Polr2i|ENSMUSG00000019738.9|polymerase (RNA) II (DNA directed) polypeptide I
mm10_v2_chr2_-_119029359_119029389	0.029777	Six6	ENSMUST00000110833.1|Ccdc32|ENSMUSG00000039983.7|coiled-coil domain containing 32
mm10_v2_chr8_-_121829480_121829571	0.0264159	Six6	ENSMUST00000174717.1|Klhdc4|ENSMUSG00000040263.10|kelch domain containing 4 	ENSMUST00000174192.1|Klhdc4|ENSMUSG00000040263.10|kelch domain containing 4 	ENSMUST00000045884.10|Klhdc4|ENSMUSG00000040263.10|kelch domain containing 4
mm10_v2_chr2_-_114201416_114201469	0.0189719	Six6	ENSMUST00000050668.3|Zfp770|ENSMUSG00000040321.3|zinc finger protein 770
mm10_v2_chr2_-_34826187_34826240	0.0168405	Six6	ENSMUST00000113075.1|Fbxw2|ENSMUSG00000035949.9|F-box and WD-40 domain protein 2 	ENSMUST00000113080.2|Fbxw2|ENSMUSG00000035949.9|F-box and WD-40 domain protein 2 	ENSMUST00000091020.3|Fbxw2|ENSMUSG00000035949.9|F-box and WD-40 domain protein 2
mm10_v2_chr16_-_60605226_60605248	0.016029	Six6	ENSMUST00000068860.6|Epha6|ENSMUSG00000055540.9|Eph receptor A6
mm10_v2_chr17_+_55959146_55959187	0.015343	Six6	ENSMUST00000086869.4|Ccdc94|ENSMUSG00000003208.8|coiled-coil domain containing 94
mm10_v2_chr10_-_78487842_78487842	0.00742908	Six6	ENSMUST00000069431.4|Gm9978|ENSMUSG00000055704.4|predicted gene 9978
mm10_v2_chr1_-_23922283_23922366	0.000801827	Six6	ENSMUST00000027339.7|Smap1|ENSMUSG00000026155.7|small ArfGAP 1
