mm10_v2_chr15_-_75048837_75048837	3.99671	Zkscan1	ENSMUST00000179762.1|Ly6c1|ENSMUSG00000079018.4|lymphocyte antigen 6 complex, locus C1 	ENSMUST00000065408.9|Ly6c1|ENSMUSG00000079018.4|lymphocyte antigen 6 complex, locus C1
mm10_v2_chr15_-_74997634_74997634	1.87208	Zkscan1	ENSMUST00000023248.6|Ly6a|ENSMUSG00000075602.4|lymphocyte antigen 6 complex, locus A
mm10_v2_chr5_-_28210022_28210034	1.79387	Zkscan1	ENSMUST00000118882.1|Cnpy1|ENSMUSG00000044681.12|canopy 1 homolog (zebrafish)
mm10_v2_chr15_-_79164477_79164496	1.56106	Zkscan1	ENSMUST00000040019.4|Sox10|ENSMUSG00000033006.9|SRY-box containing gene 10
mm10_v2_chr4_+_101419277_101419332	1.54834	Zkscan1	ENSMUST00000102780.1|Ak4|ENSMUSG00000028527.12|adenylate kinase 4 	ENSMUST00000106946.1|Ak4|ENSMUSG00000028527.12|adenylate kinase 4 	ENSMUST00000106945.1|Ak4|ENSMUSG00000028527.12|adenylate kinase 4
mm10_v2_chr10_+_86300372_86300372	1.50011	Zkscan1	ENSMUST00000020234.7|Timp3|ENSMUSG00000020044.7|tissue inhibitor of metalloproteinase 3
mm10_v2_chr7_+_112225856_112225900	1.39529	Zkscan1	ENSMUST00000050149.5|Mical2|ENSMUSG00000038244.7|microtubule associated monooxygenase, calponin and LIM domain containing 2 	ENSMUST00000106647.1|Mical2|ENSMUSG00000038244.7|microtubule associated monooxygenase, calponin and LIM domain containing 2 	ENSMUST00000106648.1|Mical2|ENSMUSG00000038244.7|microtubule associated monooxygenase, calponin and LIM domain containing 2
mm10_v2_chr4_+_138972885_138972920	1.30894	Zkscan1	ENSMUST00000123636.1|Tmco4|ENSMUSG00000041143.10|transmembrane and coiled-coil domains 4 	ENSMUST00000043042.3|Tmco4|ENSMUSG00000041143.10|transmembrane and coiled-coil domains 4 	ENSMUST00000050949.2|Tmco4|ENSMUSG00000041143.10|transmembrane and coiled-coil domains 4
mm10_v2_chr4_-_42168603_42168603	1.30314	Zkscan1	ENSMUST00000098121.3|Gm13305|ENSMUSG00000073876.3|predicted gene 13305
mm10_v2_chr2_+_84734050_84734107	1.05339	Zkscan1	ENSMUST00000090729.2|Ypel4|ENSMUSG00000034059.7|yippee-like 4 (Drosophila)
mm10_v2_chr3_+_62338344_62338344	1.01198	Zkscan1	ENSMUST00000079300.6|Arhgef26|ENSMUSG00000036885.8|Rho guanine nucleotide exchange factor (GEF) 26
mm10_v2_chr14_-_8309770_8309795	0.991183	Zkscan1	ENSMUST00000121887.1|Fam107a|ENSMUSG00000021750.9|family with sequence similarity 107, member A 	ENSMUST00000036070.8|Fam107a|ENSMUSG00000021750.9|family with sequence similarity 107, member A 	ENSMUST00000137133.1|Fam107a|ENSMUSG00000021750.9|family with sequence similarity 107, member A
mm10_v2_chr5_+_64812336_64812350	0.982684	Zkscan1	ENSMUST00000166409.1|Klf3|ENSMUSG00000029178.8|Kruppel-like factor 3 (basic)
mm10_v2_chrX_+_20870166_20870226	0.916486	Zkscan1	ENSMUST00000115342.3|Timp1|ENSMUSG00000001131.5|tissue inhibitor of metalloproteinase 1 	ENSMUST00000009530.4|Timp1|ENSMUSG00000001131.5|tissue inhibitor of metalloproteinase 1
mm10_v2_chr15_+_101224207_101224231	0.903848	Zkscan1	ENSMUST00000000543.4|Grasp|ENSMUSG00000000531.4|GRP1 (general receptor for phosphoinositides 1)-associated scaffold protein
mm10_v2_chr15_-_75111684_75111684	0.886624	Zkscan1	ENSMUST00000100542.3|Ly6c2|ENSMUSG00000022584.8|lymphocyte antigen 6 complex, locus C2
mm10_v2_chr1_+_171840607_171840641	0.86271	Zkscan1	ENSMUST00000136479.1|Cd84|ENSMUSG00000038147.7|CD84 antigen 	ENSMUST00000042302.6|Cd84|ENSMUSG00000038147.7|CD84 antigen
mm10_v2_chr9_-_103480328_103480348	0.850234	Zkscan1	ENSMUST00000124310.2|Bfsp2|ENSMUSG00000032556.9|beaded filament structural protein 2, phakinin
mm10_v2_chr5_-_70842617_70842617	0.83365	Zkscan1	ENSMUST00000031119.1|Gabrg1|ENSMUSG00000001260.6|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 1
mm10_v2_chr18_+_61105844_61105890	0.812373	Zkscan1	ENSMUST00000115268.3|Csf1r|ENSMUSG00000024621.9|colony stimulating factor 1 receptor
mm10_v2_chr16_+_17489600_17489627	0.779432	Zkscan1	ENSMUST00000115685.1|Aifm3|ENSMUSG00000022763.10|apoptosis-inducing factor, mitochondrion-associated 3
mm10_v2_chr16_+_17489639_17489683	0.747263	Zkscan1	ENSMUST00000023448.6|Aifm3|ENSMUSG00000022763.10|apoptosis-inducing factor, mitochondrion-associated 3
mm10_v2_chr11_+_28853189_28853259	0.728569	Zkscan1	ENSMUST00000020759.5|Efemp1|ENSMUSG00000020467.9|epidermal growth factor-containing fibulin-like extracellular matrix protein 1
mm10_v2_chr2_+_156840077_156840141	0.715821	Zkscan1	ENSMUST00000081335.6|Tgif2|ENSMUSG00000062175.7|TGFB-induced factor homeobox 2 	ENSMUST00000073352.3|Tgif2|ENSMUSG00000062175.7|TGFB-induced factor homeobox 2
mm10_v2_chr7_-_118491912_118491975	0.707462	Zkscan1	ENSMUST00000178344.1|Itpripl2|ENSMUSG00000095115.1|inositol 1,4,5-triphosphate receptor interacting protein-like 2
mm10_v2_chr10_-_83337845_83337882	0.700349	Zkscan1	ENSMUST00000039956.5|Slc41a2|ENSMUSG00000034591.5|solute carrier family 41, member 2
mm10_v2_chr5_-_28210168_28210179	0.698359	Zkscan1	ENSMUST00000117098.1|Cnpy1|ENSMUSG00000044681.12|canopy 1 homolog (zebrafish)
mm10_v2_chr18_-_52529847_52529890	0.660946	Zkscan1	ENSMUST00000171470.1|Lox|ENSMUSG00000024529.7|lysyl oxidase
mm10_v2_chr14_+_46832127_46832151	0.65853	Zkscan1	ENSMUST00000068532.8|Cgrrf1|ENSMUSG00000055128.8|cell growth regulator with ring finger domain 1
mm10_v2_chr14_-_52316323_52316344	0.636628	Zkscan1	ENSMUST00000135523.1|Sall2|ENSMUSG00000049532.7|sal-like 2 (Drosophila)
mm10_v2_chr9_+_98422961_98422961	0.573619	Zkscan1	ENSMUST00000052068.9|Rbp1|ENSMUSG00000046402.9|retinol binding protein 1, cellular
mm10_v2_chr10_-_39122277_39122314	0.566621	Zkscan1	ENSMUST00000136546.1|Fam229b|ENSMUSG00000051736.2|family with sequence similarity 229, member B
mm10_v2_chr9_+_45042425_45042551	0.55671	Zkscan1	ENSMUST00000034600.4|Mpzl2|ENSMUSG00000032092.4|myelin protein zero-like 2
mm10_v2_chr19_+_10525244_10525305	0.555285	Zkscan1	ENSMUST00000038379.3|Cpsf7|ENSMUSG00000034820.3|cleavage and polyadenylation specific factor 7
mm10_v2_chr15_-_78572754_78572790	0.547825	Zkscan1	ENSMUST00000043214.6|Rac2|ENSMUSG00000033220.6|RAS-related C3 botulinum substrate 2
mm10_v2_chr12_+_73997749_73997817	0.538465	Zkscan1	ENSMUST00000110451.2|Syt16|ENSMUSG00000044912.9|synaptotagmin XVI
mm10_v2_chr17_+_45506825_45506857	0.514159	Zkscan1	ENSMUST00000024733.7|Aars2|ENSMUSG00000023938.7|alanyl-tRNA synthetase 2, mitochondrial (putative)
mm10_v2_chr12_+_116405397_116405466	0.503051	Zkscan1	ENSMUST00000084828.3|Ncapg2|ENSMUSG00000042029.6|non-SMC condensin II complex, subunit G2
mm10_v2_chr14_+_34673888_34673930	0.48208	Zkscan1	ENSMUST00000048263.7|Wapal|ENSMUSG00000041408.10|wings apart-like homolog (Drosophila)
mm10_v2_chr9_-_57147034_57147034	0.467245	Zkscan1	ENSMUST00000034842.4|Neil1|ENSMUSG00000032298.7|nei endonuclease VIII-like 1 (E. coli)
mm10_v2_chr15_-_76656905_76656934	0.457775	Zkscan1	ENSMUST00000176274.1|Cyhr1|ENSMUSG00000053929.10|cysteine and histidine rich 1
mm10_v2_chr19_+_53310495_53310552	0.43454	Zkscan1	ENSMUST00000003870.7|Mxi1|ENSMUSG00000025025.7|Max interacting protein 1
mm10_v2_chrX_-_49797700_49797755	0.427089	Zkscan1	ENSMUST00000033442.7|Igsf1|ENSMUSG00000031111.10|immunoglobulin superfamily, member 1 	ENSMUST00000114891.1|Igsf1|ENSMUSG00000031111.10|immunoglobulin superfamily, member 1
mm10_v2_chr2_+_55411790_55411819	0.413024	Zkscan1	ENSMUST00000155997.1|Gm14033|ENSMUSG00000087040.1|predicted gene 14033 	ENSMUST00000128307.1|Gm14033|ENSMUSG00000087040.1|predicted gene 14033
mm10_v2_chr4_+_129960760_129960808	0.407992	Zkscan1	ENSMUST00000139884.1|1700003M07Rik|ENSMUSG00000085389.1|RIKEN cDNA 1700003M07 gene
mm10_v2_chr8_+_72646679_72646725	0.39115	Zkscan1	ENSMUST00000161386.1|Nwd1|ENSMUSG00000048148.10|NACHT and WD repeat domain containing 1 	ENSMUST00000093427.4|Nwd1|ENSMUSG00000048148.10|NACHT and WD repeat domain containing 1
mm10_v2_chr4_+_141444654_141444714	0.387659	Zkscan1	ENSMUST00000006377.6|Zbtb17|ENSMUSG00000006215.6|zinc finger and BTB domain containing 17
mm10_v2_chr11_-_69981242_69981264	0.382293	Zkscan1	ENSMUST00000108594.1|Elp5|ENSMUSG00000018565.11|elongator acetyltransferase complex subunit 5
mm10_v2_chr11_+_69981127_69981214	0.360669	Zkscan1	ENSMUST00000108593.1|Ctdnep1|ENSMUSG00000018559.10|CTD nuclear envelope phosphatase 1
mm10_v2_chr4_+_131921771_131921771	0.356034	Zkscan1	ENSMUST00000094666.3|Tmem200b|ENSMUSG00000070720.3|transmembrane protein 200B
mm10_v2_chr17_-_33718591_33718690	0.333933	Zkscan1	ENSMUST00000174040.1|March2|ENSMUSG00000079557.4|membrane-associated ring finger (C3HC4) 2 	ENSMUST00000173015.1|March2|ENSMUSG00000079557.4|membrane-associated ring finger (C3HC4) 2 	ENSMUST00000066121.6|March2|ENSMUSG00000079557.4|membrane-associated ring finger (C3HC4) 2 	ENSMUST00000172767.1|March2|ENSMUSG00000079557.4|membrane-associated ring finger (C3HC4) 2 	ENSMUST00000173329.1|March2|ENSMUSG00000079557.4|membrane-associated ring finger (C3HC4) 2
mm10_v2_chr8_-_70527945_70527982	0.331057	Zkscan1	ENSMUST00000138260.1|Kxd1|ENSMUSG00000055553.10|KxDL motif containing 1 	ENSMUST00000117580.1|Kxd1|ENSMUSG00000055553.10|KxDL motif containing 1
mm10_v2_chrX_-_164980279_164980309	0.326587	Zkscan1	ENSMUST00000112247.2|Mospd2|ENSMUSG00000061778.4|motile sperm domain containing 2
mm10_v2_chr19_-_61228396_61228454	0.325836	Zkscan1	ENSMUST00000076046.6|Csf2ra|ENSMUSG00000059326.6|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)
mm10_v2_chr11_-_61453992_61454106	0.317227	Zkscan1	ENSMUST00000060255.7|Rnf112|ENSMUSG00000010086.11|ring finger protein 112 	ENSMUST00000054927.7|Rnf112|ENSMUSG00000010086.11|ring finger protein 112 	ENSMUST00000102661.3|Rnf112|ENSMUSG00000010086.11|ring finger protein 112
mm10_v2_chr19_+_53944870_53944907	0.316549	Zkscan1	ENSMUST00000025932.7|Shoc2|ENSMUSG00000024976.7|soc-2 (suppressor of clear) homolog (C. elegans)
mm10_v2_chr8_+_72646728_72646781	0.316014	Zkscan1	ENSMUST00000161254.1|Nwd1|ENSMUSG00000048148.10|NACHT and WD repeat domain containing 1
mm10_v2_chr4_-_133277730_133277804	0.311918	Zkscan1	ENSMUST00000105907.2|Tmem222|ENSMUSG00000028857.10|transmembrane protein 222
mm10_v2_chr17_+_24886643_24886765	0.311829	Zkscan1	ENSMUST00000117890.1|Spsb3|ENSMUSG00000024160.10|splA/ryanodine receptor domain and SOCS box containing 3 	ENSMUST00000168265.1|Spsb3|ENSMUSG00000024160.10|splA/ryanodine receptor domain and SOCS box containing 3 	ENSMUST00000120943.1|Spsb3|ENSMUSG00000024160.10|splA/ryanodine receptor domain and SOCS box containing 3 	ENSMUST00000068508.6|Spsb3|ENSMUSG00000024160.10|splA/ryanodine receptor domain and SOCS box containing 3 	ENSMUST00000119829.1|Spsb3|ENSMUSG00000024160.10|splA/ryanodine receptor domain and SOCS box containing 3
mm10_v2_chr10_+_80053488_80053570	0.30561	Zkscan1	ENSMUST00000105372.1|Gpx4|ENSMUSG00000075706.4|glutathione peroxidase 4
mm10_v2_chr9_+_107580117_107580117	0.300297	Zkscan1	ENSMUST00000093785.4|Nat6|ENSMUSG00000079334.2|N-acetyltransferase 6
mm10_v2_chr3_-_146108047_146108130	0.280432	Zkscan1	ENSMUST00000160285.1|Wdr63|ENSMUSG00000043020.7|WD repeat domain 63
mm10_v2_chr18_-_6490808_6490869	0.280241	Zkscan1	ENSMUST00000028100.6|Epc1|ENSMUSG00000024240.7|enhancer of polycomb homolog 1 (Drosophila) 	ENSMUST00000050542.5|Epc1|ENSMUSG00000024240.7|enhancer of polycomb homolog 1 (Drosophila)
mm10_v2_chr5_-_134639311_134639348	0.278001	Zkscan1	ENSMUST00000036125.8|Eif4h|ENSMUSG00000040731.10|eukaryotic translation initiation factor 4H
mm10_v2_chr19_+_3767953_3768033	0.27759	Zkscan1	ENSMUST00000113970.1|Suv420h1|ENSMUSG00000045098.12|suppressor of variegation 4-20 homolog 1 (Drosophila)
mm10_v2_chr4_-_141078302_141078357	0.271251	Zkscan1	ENSMUST00000030760.8|Necap2|ENSMUSG00000028923.8|NECAP endocytosis associated 2
mm10_v2_chrX_-_164980310_164980375	0.264291	Zkscan1	ENSMUST00000004715.1|Mospd2|ENSMUSG00000061778.4|motile sperm domain containing 2 	ENSMUST00000112248.2|Mospd2|ENSMUSG00000061778.4|motile sperm domain containing 2
mm10_v2_chr9_+_119357381_119357381	0.259268	Zkscan1	ENSMUST00000039610.8|Xylb|ENSMUSG00000035769.8|xylulokinase homolog (H. influenzae)
mm10_v2_chr1_+_50927511_50927543	0.254249	Zkscan1	ENSMUST00000081851.3|Tmeff2|ENSMUSG00000026109.8|transmembrane protein with EGF-like and two follistatin-like domains 2
mm10_v2_chr4_-_116144609_116144626	0.247046	Zkscan1	ENSMUST00000030469.4|Lurap1|ENSMUSG00000028701.4|leucine rich adaptor protein 1
mm10_v2_chr8_+_70527829_70527846	0.246849	Zkscan1	ENSMUST00000119698.1|Fkbp8|ENSMUSG00000019428.10|FK506 binding protein 8
mm10_v2_chr2_+_172472512_172472535	0.246483	Zkscan1	ENSMUST00000029007.2|Fam209|ENSMUSG00000027505.2|family with sequence similarity 209
mm10_v2_chr7_+_119690026_119690026	0.238366	Zkscan1	ENSMUST00000047045.8|Acsm4|ENSMUSG00000047026.8|acyl-CoA synthetase medium-chain family member 4
mm10_v2_chr2_-_27248335_27248346	0.214996	Zkscan1	ENSMUST00000139312.1|Sardh|ENSMUSG00000009614.10|sarcosine dehydrogenase
mm10_v2_chr10_+_90829409_90829481	0.206079	Zkscan1	ENSMUST00000182202.1|Anks1b|ENSMUSG00000058589.8|ankyrin repeat and sterile alpha motif domain containing 1B 	ENSMUST00000182966.1|Anks1b|ENSMUSG00000058589.8|ankyrin repeat and sterile alpha motif domain containing 1B
mm10_v2_chr3_+_90062781_90062836	0.205777	Zkscan1	ENSMUST00000029551.2|1700094D03Rik|ENSMUSG00000078667.2|RIKEN cDNA 1700094D03 gene
mm10_v2_chr18_+_14424821_14424868	0.204383	Zkscan1	ENSMUST00000069552.5|Gm5160|ENSMUSG00000055795.5|predicted gene 5160
mm10_v2_chr10_+_90829835_90829848	0.196229	Zkscan1	ENSMUST00000179964.1|Anks1b|ENSMUSG00000058589.8|ankyrin repeat and sterile alpha motif domain containing 1B
mm10_v2_chr8_+_70527724_70527766	0.193066	Zkscan1	ENSMUST00000119353.2|Fkbp8|ENSMUSG00000019428.10|FK506 binding protein 8 	ENSMUST00000075491.7|Fkbp8|ENSMUSG00000019428.10|FK506 binding protein 8
mm10_v2_chr19_+_28963892_28963969	0.191722	Zkscan1	ENSMUST00000045674.2|Ppapdc2|ENSMUSG00000040105.2|phosphatidic acid phosphatase type 2 domain containing 2
mm10_v2_chr7_-_28962265_28962340	0.191564	Zkscan1	ENSMUST00000068045.7|Actn4|ENSMUSG00000054808.7|actinin alpha 4
mm10_v2_chr10_+_79881023_79881042	0.189516	Zkscan1	ENSMUST00000166201.1|Prtn3|ENSMUSG00000057729.6|proteinase 3
mm10_v2_chr5_-_134229581_134229625	0.189229	Zkscan1	ENSMUST00000111275.1|Ncf1|ENSMUSG00000015950.7|neutrophil cytosolic factor 1 	ENSMUST00000016094.6|Ncf1|ENSMUSG00000015950.7|neutrophil cytosolic factor 1 	ENSMUST00000144086.1|Ncf1|ENSMUSG00000015950.7|neutrophil cytosolic factor 1
mm10_v2_chr6_+_83711232_83711288	0.188844	Zkscan1	ENSMUST00000037807.1|Vax2|ENSMUSG00000034777.1|ventral anterior homeobox containing gene 2
mm10_v2_chr6_-_122340499_122340510	0.187065	Zkscan1	ENSMUST00000160843.1|Phc1|ENSMUSG00000040669.8|polyhomeotic-like 1 (Drosophila)
mm10_v2_chrX_-_78583882_78583901	0.175247	Zkscan1	ENSMUST00000114025.1|Prrg1|ENSMUSG00000047996.10|proline rich Gla (G-carboxyglutamic acid) 1 	ENSMUST00000134602.1|Prrg1|ENSMUSG00000047996.10|proline rich Gla (G-carboxyglutamic acid) 1 	ENSMUST00000114024.2|Prrg1|ENSMUSG00000047996.10|proline rich Gla (G-carboxyglutamic acid) 1
mm10_v2_chr6_-_122340525_122340561	0.173518	Zkscan1	ENSMUST00000112600.2|Phc1|ENSMUSG00000040669.8|polyhomeotic-like 1 (Drosophila)
mm10_v2_chr1_+_90603425_90603511	0.169067	Zkscan1	ENSMUST00000036153.5|Cops8|ENSMUSG00000034432.5|COP9 (constitutive photomorphogenic) homolog, subunit 8 (Arabidopsis thaliana)
mm10_v2_chr17_+_33524170_33524231	0.166877	Zkscan1	ENSMUST00000087623.6|Adamts10|ENSMUSG00000024299.10|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 10
mm10_v2_chr19_+_5088534_5088575	0.164608	Zkscan1	ENSMUST00000025811.4|Yif1a|ENSMUSG00000024875.4|Yip1 interacting factor homolog A (S. cerevisiae)
mm10_v2_chr10_+_90829538_90829566	0.139114	Zkscan1	ENSMUST00000179694.2|Anks1b|ENSMUSG00000058589.8|ankyrin repeat and sterile alpha motif domain containing 1B
mm10_v2_chr11_-_78165521_78165589	0.136454	Zkscan1	ENSMUST00000017530.3|Traf4|ENSMUSG00000017386.4|TNF receptor associated factor 4
mm10_v2_chr10_+_90829780_90829791	0.135632	Zkscan1	ENSMUST00000179337.2|Anks1b|ENSMUSG00000058589.8|ankyrin repeat and sterile alpha motif domain containing 1B
mm10_v2_chr2_+_27676440_27676454	0.13539	Zkscan1	ENSMUST00000129514.1|Rxra|ENSMUSG00000015846.8|retinoid X receptor alpha
mm10_v2_chr1_-_93635692_93635722	0.124318	Zkscan1	ENSMUST00000027498.7|Stk25|ENSMUSG00000026277.7|serine/threonine kinase 25 (yeast)
mm10_v2_chr7_+_144896523_144896539	0.120266	Zkscan1	ENSMUST00000033389.5|Fgf15|ENSMUSG00000031073.5|fibroblast growth factor 15
mm10_v2_chr16_+_43762221_43762221	0.114976	Zkscan1	ENSMUST00000023390.4|Drd3|ENSMUSG00000022705.4|dopamine receptor D3
mm10_v2_chr1_-_171150588_171150609	0.111265	Zkscan1	ENSMUST00000155798.1|Sdhc|ENSMUSG00000058076.6|succinate dehydrogenase complex, subunit C, integral membrane protein 	ENSMUST00000081560.4|Sdhc|ENSMUSG00000058076.6|succinate dehydrogenase complex, subunit C, integral membrane protein 	ENSMUST00000111336.3|Sdhc|ENSMUSG00000058076.6|succinate dehydrogenase complex, subunit C, integral membrane protein
mm10_v2_chr18_+_53245618_53245662	0.105703	Zkscan1	ENSMUST00000165032.1|Snx24|ENSMUSG00000024535.9|sorting nexing 24
mm10_v2_chr2_-_105399286_105399319	0.10147	Zkscan1	ENSMUST00000006128.6|Rcn1|ENSMUSG00000005973.6|reticulocalbin 1
mm10_v2_chr11_+_78826575_78826618	0.0950793	Zkscan1	ENSMUST00000147875.2|Lyrm9|ENSMUSG00000072640.5|LYR motif containing 9 	ENSMUST00000141321.1|Lyrm9|ENSMUSG00000072640.5|LYR motif containing 9
mm10_v2_chr11_+_19924354_19924375	0.0833894	Zkscan1	ENSMUST00000093299.6|Spred2|ENSMUSG00000045671.11|sprouty-related, EVH1 domain containing 2
mm10_v2_chrX_-_78583782_78583796	0.0820411	Zkscan1	ENSMUST00000177904.1|Prrg1|ENSMUSG00000047996.10|proline rich Gla (G-carboxyglutamic acid) 1
mm10_v2_chr17_+_75005523_75005568	0.0694129	Zkscan1	ENSMUST00000001927.5|Ltbp1|ENSMUSG00000001870.9|latent transforming growth factor beta binding protein 1
mm10_v2_chr4_-_134915010_134915024	0.0685287	Zkscan1	ENSMUST00000105863.1|Tmem50a|ENSMUSG00000028822.5|transmembrane protein 50A 	ENSMUST00000030626.5|Tmem50a|ENSMUSG00000028822.5|transmembrane protein 50A
mm10_v2_chr7_+_24370255_24370312	0.0612487	Zkscan1	ENSMUST00000171904.1|Kcnn4|ENSMUSG00000054342.7|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4
mm10_v2_chr8_-_70527645_70527783	0.0578452	Zkscan1	ENSMUST00000132867.1|Kxd1|ENSMUSG00000055553.10|KxDL motif containing 1
mm10_v2_chr4_-_155785864_155785880	0.0539206	Zkscan1	ENSMUST00000097742.2|Tmem88b|ENSMUSG00000073680.2|transmembrane protein 88B
mm10_v2_chr19_-_10525201_10525214	0.0517461	Zkscan1	ENSMUST00000025570.6|Sdhaf2|ENSMUSG00000024668.7|succinate dehydrogenase complex assembly factor 2
mm10_v2_chr10_-_81545175_81545192	0.0508155	Zkscan1	ENSMUST00000043604.5|Gna11|ENSMUSG00000034781.5|guanine nucleotide binding protein, alpha 11
mm10_v2_chr12_+_85110833_85110866	0.0504027	Zkscan1	ENSMUST00000053811.8|Dlst|ENSMUSG00000004789.9|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)
mm10_v2_chr4_-_47057296_47057356	0.0421069	Zkscan1	ENSMUST00000107747.1|Anks6|ENSMUSG00000066191.5|ankyrin repeat and sterile alpha motif domain containing 6 	ENSMUST00000084616.2|Anks6|ENSMUSG00000066191.5|ankyrin repeat and sterile alpha motif domain containing 6
mm10_v2_chr17_+_34039437_34039481	0.038771	Zkscan1	ENSMUST00000131134.1|Col11a2|ENSMUSG00000024330.10|collagen, type XI, alpha 2 	ENSMUST00000087497.4|Col11a2|ENSMUSG00000024330.10|collagen, type XI, alpha 2 	ENSMUST00000114255.1|Col11a2|ENSMUSG00000024330.10|collagen, type XI, alpha 2 	ENSMUST00000114252.1|Col11a2|ENSMUSG00000024330.10|collagen, type XI, alpha 2
mm10_v2_chr2_-_156839790_156839892	0.0360109	Zkscan1	ENSMUST00000134838.1|Gm14230|ENSMUSG00000087179.2|predicted gene 14230 	ENSMUST00000137463.1|Gm14230|ENSMUSG00000087179.2|predicted gene 14230 	ENSMUST00000149275.2|Gm14230|ENSMUSG00000087179.2|predicted gene 14230
mm10_v2_chr19_+_3767397_3767523	0.0355893	Zkscan1	ENSMUST00000113974.4|Suv420h1|ENSMUSG00000045098.12|suppressor of variegation 4-20 homolog 1 (Drosophila) 	ENSMUST00000113972.2|Suv420h1|ENSMUSG00000045098.12|suppressor of variegation 4-20 homolog 1 (Drosophila) 	ENSMUST00000113973.1|Suv420h1|ENSMUSG00000045098.12|suppressor of variegation 4-20 homolog 1 (Drosophila) 	ENSMUST00000113977.2|Suv420h1|ENSMUSG00000045098.12|suppressor of variegation 4-20 homolog 1 (Drosophila) 	ENSMUST00000052699.6|Suv420h1|ENSMUSG00000045098.12|suppressor of variegation 4-20 homolog 1 (Drosophila) 	ENSMUST00000113968.2|Suv420h1|ENSMUSG00000045098.12|suppressor of variegation 4-20 homolog 1 (Drosophila)
mm10_v2_chr19_-_53944621_53944632	0.0350725	Zkscan1	ENSMUST00000135402.2|Bbip1|ENSMUSG00000084957.2|BBSome interacting protein 1
mm10_v2_chr1_-_56969864_56969875	0.0298733	Zkscan1	ENSMUST00000177424.1|Satb2|ENSMUSG00000038331.9|special AT-rich sequence binding protein 2
mm10_v2_chr1_-_93635479_93635632	0.0191694	Zkscan1	ENSMUST00000133769.1|Stk25|ENSMUSG00000026277.7|serine/threonine kinase 25 (yeast)
mm10_v2_chr8_+_4253067_4253128	0.012287	Zkscan1	ENSMUST00000011981.3|Snapc2|ENSMUSG00000011837.3|small nuclear RNA activating complex, polypeptide 2
mm10_v2_chr17_+_87107621_87107684	0.00882812	Zkscan1	ENSMUST00000041369.6|Socs5|ENSMUSG00000037104.8|suppressor of cytokine signaling 5
