mm10_v2_chrY_+_1010543_1010613	2.31331	Crx_Gsc	ENSMUST00000091197.3|Eif2s3y|ENSMUSG00000069049.5|eukaryotic translation initiation factor 2, subunit 3, structural gene Y-linked
mm10_v2_chr4_+_74013442_74013674	1.62368	Crx_Gsc	ENSMUST00000098006.2|Frmd3|ENSMUSG00000049122.11|FERM domain containing 3 	ENSMUST00000084474.5|Frmd3|ENSMUSG00000049122.11|FERM domain containing 3
mm10_v2_chr11_+_104231390_104231453	1.56914	Crx_Gsc	ENSMUST00000106992.3|Mapt|ENSMUSG00000018411.11|microtubule-associated protein tau
mm10_v2_chr9_-_53975246_53975348	1.46003	Crx_Gsc	ENSMUST00000048409.7|Elmod1|ENSMUSG00000041986.9|ELMO/CED-12 domain containing 1
mm10_v2_chr2_+_69722797_69722840	1.09429	Crx_Gsc	ENSMUST00000090858.3|Ppig|ENSMUSG00000042133.10|peptidyl-prolyl isomerase G (cyclophilin G)
mm10_v2_chr1_-_154725920_154725920	0.98051	Crx_Gsc	ENSMUST00000004214.8|Cacna1e|ENSMUSG00000004110.8|calcium channel, voltage-dependent, R type, alpha 1E subunit
mm10_v2_chr7_+_44384803_44384868	0.971289	Crx_Gsc	ENSMUST00000120262.1|Syt3|ENSMUSG00000030731.7|synaptotagmin III
mm10_v2_chr1_+_85575676_85575676	0.943309	Crx_Gsc	ENSMUST00000178024.1|G530012D18Rik|ENSMUSG00000094127.1|RIKEN cDNA G530012D1 gene
mm10_v2_chr14_+_61138445_61138495	0.937636	Crx_Gsc	ENSMUST00000089394.3|Sacs|ENSMUSG00000048279.11|sacsin 	ENSMUST00000119509.1|Sacs|ENSMUSG00000048279.11|sacsin
mm10_v2_chr8_-_54724317_54724388	0.914211	Crx_Gsc	ENSMUST00000129132.2|Wdr17|ENSMUSG00000039375.10|WD repeat domain 17 	ENSMUST00000150488.1|Wdr17|ENSMUSG00000039375.10|WD repeat domain 17 	ENSMUST00000127511.2|Wdr17|ENSMUSG00000039375.10|WD repeat domain 17
mm10_v2_chr7_+_44384098_44384154	0.9091	Crx_Gsc	ENSMUST00000118962.1|Syt3|ENSMUSG00000030731.7|synaptotagmin III 	ENSMUST00000118831.1|Syt3|ENSMUSG00000030731.7|synaptotagmin III
mm10_v2_chr14_+_65968483_65968651	0.891554	Crx_Gsc	ENSMUST00000022616.6|Clu|ENSMUSG00000022037.8|clusterin
mm10_v2_chr12_-_69357120_69357181	0.823276	Crx_Gsc	ENSMUST00000021368.8|Nemf|ENSMUSG00000020982.8|nuclear export mediator factor
mm10_v2_chr13_+_110395041_110395057	0.81153	Crx_Gsc	ENSMUST00000022212.7|Plk2|ENSMUSG00000021701.7|polo-like kinase 2
mm10_v2_chr11_-_70459957_70459984	0.758975	Crx_Gsc	ENSMUST00000019064.2|Cxcl16|ENSMUSG00000018920.5|chemokine (C-X-C motif) ligand 16
mm10_v2_chr7_+_44384604_44384674	0.682686	Crx_Gsc	ENSMUST00000130707.1|Syt3|ENSMUSG00000030731.7|synaptotagmin III 	ENSMUST00000130844.1|Syt3|ENSMUSG00000030731.7|synaptotagmin III
mm10_v2_chr2_-_164404606_164404621	0.670076	Crx_Gsc	ENSMUST00000109359.1|Matn4|ENSMUSG00000016995.11|matrilin 4 	ENSMUST00000109358.1|Matn4|ENSMUSG00000016995.11|matrilin 4 	ENSMUST00000103103.3|Matn4|ENSMUSG00000016995.11|matrilin 4
mm10_v2_chr8_-_54724474_54724504	0.66753	Crx_Gsc	ENSMUST00000175915.1|Wdr17|ENSMUSG00000039375.10|WD repeat domain 17
mm10_v2_chr7_+_99535439_99535498	0.651177	Crx_Gsc	ENSMUST00000098266.2|Arrb1|ENSMUSG00000018909.9|arrestin, beta 1 	ENSMUST00000179755.1|Arrb1|ENSMUSG00000018909.9|arrestin, beta 1
mm10_v2_chr12_-_25096080_25096096	0.637204	Crx_Gsc	ENSMUST00000020974.6|Id2|ENSMUSG00000020644.8|inhibitor of DNA binding 2
mm10_v2_chr17_+_37002527_37002569	0.636082	Crx_Gsc	ENSMUST00000174747.1|Zfp57|ENSMUSG00000036036.9|zinc finger protein 57
mm10_v2_chr2_-_104257400_104257400	0.619494	Crx_Gsc	ENSMUST00000141159.1|D430041D05Rik|ENSMUSG00000068373.8|RIKEN cDNA D430041D05 gene
mm10_v2_chr6_-_59426279_59426345	0.614966	Crx_Gsc	ENSMUST00000051065.4|Gprin3|ENSMUSG00000045441.4|GPRIN family member 3
mm10_v2_chr10_+_90576872_90576992	0.598976	Crx_Gsc	ENSMUST00000182550.1|Anks1b|ENSMUSG00000058589.8|ankyrin repeat and sterile alpha motif domain containing 1B 	ENSMUST00000099364.5|Anks1b|ENSMUSG00000058589.8|ankyrin repeat and sterile alpha motif domain containing 1B
mm10_v2_chr4_+_84884418_84884465	0.588075	Crx_Gsc	ENSMUST00000169371.2|Cntln|ENSMUSG00000038070.9|centlein, centrosomal protein
mm10_v2_chr10_-_53379816_53379858	0.569651	Crx_Gsc	ENSMUST00000095691.5|Cep85l|ENSMUSG00000038594.8|centrosomal protein 85-like
mm10_v2_chr5_+_129584169_129584232	0.562946	Crx_Gsc	ENSMUST00000031390.8|Mmp17|ENSMUSG00000029436.8|matrix metallopeptidase 17
mm10_v2_chrX_+_7919816_7919905	0.559799	Crx_Gsc	ENSMUST00000041096.3|Pcsk1n|ENSMUSG00000039278.10|proprotein convertase subtilisin/kexin type 1 inhibitor
mm10_v2_chr2_-_24763047_24763153	0.554889	Crx_Gsc	ENSMUST00000100348.3|Cacna1b|ENSMUSG00000004113.12|calcium channel, voltage-dependent, N type, alpha 1B subunit 	ENSMUST00000041342.5|Cacna1b|ENSMUSG00000004113.12|calcium channel, voltage-dependent, N type, alpha 1B subunit 	ENSMUST00000114447.1|Cacna1b|ENSMUSG00000004113.12|calcium channel, voltage-dependent, N type, alpha 1B subunit 	ENSMUST00000102939.2|Cacna1b|ENSMUSG00000004113.12|calcium channel, voltage-dependent, N type, alpha 1B subunit 	ENSMUST00000070864.7|Cacna1b|ENSMUSG00000004113.12|calcium channel, voltage-dependent, N type, alpha 1B subunit
mm10_v2_chr10_+_83543941_83544007	0.551819	Crx_Gsc	ENSMUST00000038388.5|A230046K03Rik|ENSMUSG00000034560.5|RIKEN cDNA A230046K03 gene
mm10_v2_chr15_-_84065329_84065364	0.551546	Crx_Gsc	ENSMUST00000156187.1|Efcab6|ENSMUSG00000022441.11|EF-hand calcium binding domain 6
mm10_v2_chr11_+_101246405_101246567	0.548753	Crx_Gsc	ENSMUST00000122006.1|Ramp2|ENSMUSG00000001240.7|receptor (calcitonin) activity modifying protein 2 	ENSMUST00000151830.1|Ramp2|ENSMUSG00000001240.7|receptor (calcitonin) activity modifying protein 2
mm10_v2_chr19_+_26605106_26605119	0.542383	Crx_Gsc	ENSMUST00000025862.7|Smarca2|ENSMUSG00000024921.10|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 	ENSMUST00000176030.1|Smarca2|ENSMUSG00000024921.10|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
mm10_v2_chr17_+_55445550_55445701	0.539267	Crx_Gsc	ENSMUST00000025000.3|St6gal2|ENSMUSG00000024172.4|beta galactoside alpha 2,6 sialyltransferase 2
mm10_v2_chr12_+_81631369_81631394	0.534231	Crx_Gsc	ENSMUST00000036116.5|Ttc9|ENSMUSG00000042734.5|tetratricopeptide repeat domain 9
mm10_v2_chr14_-_19977249_19977253	0.53285	Crx_Gsc	ENSMUST00000160013.1|Gng2|ENSMUSG00000043004.7|guanine nucleotide binding protein (G protein), gamma 2
mm10_v2_chr4_+_84884276_84884314	0.519049	Crx_Gsc	ENSMUST00000047023.6|Cntln|ENSMUSG00000038070.9|centlein, centrosomal protein
mm10_v2_chrX_-_85776606_85776653	0.518164	Crx_Gsc	ENSMUST00000142152.1|Gyk|ENSMUSG00000025059.10|glycerol kinase 	ENSMUST00000156390.1|Gyk|ENSMUSG00000025059.10|glycerol kinase 	ENSMUST00000113978.2|Gyk|ENSMUSG00000025059.10|glycerol kinase
mm10_v2_chr15_+_82252397_82252475	0.514594	Crx_Gsc	ENSMUST00000136948.1|1500009C09Rik|ENSMUSG00000068099.4|RIKEN cDNA 1500009C09 gene
mm10_v2_chr8_-_45975224_45975281	0.512594	Crx_Gsc	ENSMUST00000095323.1|1700029J07Rik|ENSMUSG00000071103.3|RIKEN cDNA 1700029J07 gene 	ENSMUST00000098786.2|1700029J07Rik|ENSMUSG00000071103.3|RIKEN cDNA 1700029J07 gene
mm10_v2_chr2_+_181680284_181680332	0.497768	Crx_Gsc	ENSMUST00000103042.3|Tcea2|ENSMUSG00000059540.9|transcription elongation factor A (SII), 2
mm10_v2_chr17_+_37002510_37002525	0.492253	Crx_Gsc	ENSMUST00000069250.7|Zfp57|ENSMUSG00000036036.9|zinc finger protein 57
mm10_v2_chr1_-_189688074_189688098	0.484361	Crx_Gsc	ENSMUST00000171929.1|Cenpf|ENSMUSG00000026605.8|centromere protein F 	ENSMUST00000165962.1|Cenpf|ENSMUSG00000026605.8|centromere protein F
mm10_v2_chr6_+_41605482_41605569	0.481568	Crx_Gsc	ENSMUST00000114732.2|Ephb6|ENSMUSG00000029869.7|Eph receptor B6
mm10_v2_chr11_+_70459940_70460137	0.48099	Crx_Gsc	ENSMUST00000147289.1|Zmynd15|ENSMUSG00000040829.8|zinc finger, MYND-type containing 15 	ENSMUST00000126105.1|Zmynd15|ENSMUSG00000040829.8|zinc finger, MYND-type containing 15
mm10_v2_chr7_+_99535652_99535740	0.471512	Crx_Gsc	ENSMUST00000032995.8|Arrb1|ENSMUSG00000018909.9|arrestin, beta 1 	ENSMUST00000162404.1|Arrb1|ENSMUSG00000018909.9|arrestin, beta 1
mm10_v2_chr18_+_37477768_37477835	0.457231	Crx_Gsc	ENSMUST00000051442.5|Pcdhb16|ENSMUSG00000047910.5|protocadherin beta 16
mm10_v2_chr13_-_27582168_27582172	0.438408	Crx_Gsc	ENSMUST00000006664.1|Prl8a1|ENSMUSG00000019756.4|prolactin family 8, subfamily a, member 1 	ENSMUST00000095926.1|Prl8a1|ENSMUSG00000019756.4|prolactin family 8, subfamily a, member 1
mm10_v2_chr11_+_49203465_49203524	0.4372	Crx_Gsc	ENSMUST00000150284.1|Zfp62|ENSMUSG00000046311.7|zinc finger protein 62 	ENSMUST00000109197.1|Zfp62|ENSMUSG00000046311.7|zinc finger protein 62 	ENSMUST00000151228.1|Zfp62|ENSMUSG00000046311.7|zinc finger protein 62
mm10_v2_chr4_+_134496996_134497013	0.432432	Crx_Gsc	ENSMUST00000095074.3|Paqr7|ENSMUSG00000037348.9|progestin and adipoQ receptor family member VII
mm10_v2_chr4_-_138396438_138396464	0.4265	Crx_Gsc	ENSMUST00000105032.2|Fam43b|ENSMUSG00000078235.2|family with sequence similarity 43, member B
mm10_v2_chr9_+_13827708_13827781	0.41771	Crx_Gsc	ENSMUST00000059579.5|Fam76b|ENSMUSG00000037808.6|family with sequence similarity 76, member B
mm10_v2_chr2_+_65845767_65845799	0.417223	Crx_Gsc	ENSMUST00000122912.1|Csrnp3|ENSMUSG00000044647.10|cysteine-serine-rich nuclear protein 3
mm10_v2_chr6_+_58831748_58831898	0.413932	Crx_Gsc	ENSMUST00000126292.1|Herc3|ENSMUSG00000029804.10|hect domain and RLD 3 	ENSMUST00000031823.5|Herc3|ENSMUSG00000029804.10|hect domain and RLD 3
mm10_v2_chrX_+_73483602_73483644	0.413084	Crx_Gsc	ENSMUST00000033741.8|Bgn|ENSMUSG00000031375.11|biglycan 	ENSMUST00000169489.1|Bgn|ENSMUSG00000031375.11|biglycan
mm10_v2_chr8_+_20136455_20136574	0.411203	Crx_Gsc	ENSMUST00000179299.1|Gm21811|ENSMUSG00000096401.1|predicted gene, 21811 	ENSMUST00000096485.4|Gm21811|ENSMUSG00000096401.1|predicted gene, 21811
mm10_v2_chr1_-_155417394_155417435	0.41117	Crx_Gsc	ENSMUST00000111775.1|Xpr1|ENSMUSG00000026469.8|xenotropic and polytropic retrovirus receptor 1 	ENSMUST00000111774.1|Xpr1|ENSMUSG00000026469.8|xenotropic and polytropic retrovirus receptor 1
mm10_v2_chr7_-_140082246_140082301	0.408406	Crx_Gsc	ENSMUST00000166758.2|Caly|ENSMUSG00000025468.8|calcyon neuron-specific vesicular protein
mm10_v2_chr14_-_19977151_19977204	0.404272	Crx_Gsc	ENSMUST00000055100.7|Gng2|ENSMUSG00000043004.7|guanine nucleotide binding protein (G protein), gamma 2 	ENSMUST00000162425.1|Gng2|ENSMUSG00000043004.7|guanine nucleotide binding protein (G protein), gamma 2
mm10_v2_chr14_-_19977040_19977059	0.401189	Crx_Gsc	ENSMUST00000159028.1|Gng2|ENSMUSG00000043004.7|guanine nucleotide binding protein (G protein), gamma 2
mm10_v2_chr9_+_95954744_95954783	0.388938	Crx_Gsc	ENSMUST00000034981.7|Xrn1|ENSMUSG00000032410.7|5'-3' exoribonuclease 1
mm10_v2_chr1_-_119837613_119837673	0.380797	Crx_Gsc	ENSMUST00000064091.5|Ptpn4|ENSMUSG00000026384.7|protein tyrosine phosphatase, non-receptor type 4
mm10_v2_chr11_-_116412965_116413004	0.376513	Crx_Gsc	ENSMUST00000100202.3|Rnf157|ENSMUSG00000052949.8|ring finger protein 157 	ENSMUST00000106398.2|Rnf157|ENSMUSG00000052949.8|ring finger protein 157
mm10_v2_chr4_-_141078302_141078357	0.374326	Crx_Gsc	ENSMUST00000030760.8|Necap2|ENSMUSG00000028923.8|NECAP endocytosis associated 2
mm10_v2_chr1_-_155417283_155417323	0.371937	Crx_Gsc	ENSMUST00000027741.5|Xpr1|ENSMUSG00000026469.8|xenotropic and polytropic retrovirus receptor 1
mm10_v2_chr5_+_117120120_117120180	0.371337	Crx_Gsc	ENSMUST00000111978.1|Taok3|ENSMUSG00000061288.7|TAO kinase 3
mm10_v2_chr11_+_101246960_101247093	0.369636	Crx_Gsc	ENSMUST00000107282.3|Ramp2|ENSMUSG00000001240.7|receptor (calcitonin) activity modifying protein 2
mm10_v2_chr10_-_9901079_9901250	0.366882	Crx_Gsc	ENSMUST00000141722.1|Stxbp5|ENSMUSG00000019790.10|syntaxin binding protein 5 (tomosyn)
mm10_v2_chr9_-_95750335_95750368	0.358381	Crx_Gsc	ENSMUST00000053785.3|Trpc1|ENSMUSG00000032839.7|transient receptor potential cation channel, subfamily C, member 1
mm10_v2_chr1_-_150392719_150392762	0.357284	Crx_Gsc	ENSMUST00000006167.6|BC003331|ENSMUSG00000006010.8|cDNA sequence BC003331 	ENSMUST00000094477.2|BC003331|ENSMUSG00000006010.8|cDNA sequence BC003331 	ENSMUST00000097547.3|BC003331|ENSMUSG00000006010.8|cDNA sequence BC003331
mm10_v2_chr6_+_86404336_86404473	0.350918	Crx_Gsc	ENSMUST00000113713.2|Tia1|ENSMUSG00000071337.5|cytotoxic granule-associated RNA binding protein 1 	ENSMUST00000113708.1|Tia1|ENSMUSG00000071337.5|cytotoxic granule-associated RNA binding protein 1
mm10_v2_chr8_+_119344490_119344538	0.34701	Crx_Gsc	ENSMUST00000034300.6|Hsbp1|ENSMUSG00000031839.6|heat shock factor binding protein 1
mm10_v2_chr2_+_65845833_65845850	0.344597	Crx_Gsc	ENSMUST00000053910.3|Csrnp3|ENSMUSG00000044647.10|cysteine-serine-rich nuclear protein 3
mm10_v2_chr10_-_127341583_127341614	0.339108	Crx_Gsc	ENSMUST00000026474.3|Gli1|ENSMUSG00000025407.6|GLI-Kruppel family member GLI1
mm10_v2_chr4_+_141368116_141368220	0.334766	Crx_Gsc	ENSMUST00000006380.4|Fam131c|ENSMUSG00000006218.4|family with sequence similarity 131, member C
mm10_v2_chr1_+_150392794_150392849	0.330863	Crx_Gsc	ENSMUST00000124973.2|Tpr|ENSMUSG00000006005.11|translocated promoter region
mm10_v2_chr18_+_42511496_42511521	0.329794	Crx_Gsc	ENSMUST00000025375.7|Tcerg1|ENSMUSG00000024498.9|transcription elongation regulator 1 (CA150)
mm10_v2_chr5_-_139484420_139484473	0.326776	Crx_Gsc	ENSMUST00000150992.1|Zfand2a|ENSMUSG00000053581.7|zinc finger, AN1-type domain 2A
mm10_v2_chr17_+_35517100_35517259	0.323235	Crx_Gsc	ENSMUST00000164242.2|Cchcr1|ENSMUSG00000040312.8|coiled-coil alpha-helical rod protein 1 	ENSMUST00000045956.7|Cchcr1|ENSMUSG00000040312.8|coiled-coil alpha-helical rod protein 1
mm10_v2_chr9_+_87144285_87144343	0.323054	Crx_Gsc	ENSMUST00000113149.1|Mrap2|ENSMUSG00000042761.8|melanocortin 2 receptor accessory protein 2 	ENSMUST00000143779.1|Mrap2|ENSMUSG00000042761.8|melanocortin 2 receptor accessory protein 2 	ENSMUST00000179313.1|Mrap2|ENSMUSG00000042761.8|melanocortin 2 receptor accessory protein 2 	ENSMUST00000049457.7|Mrap2|ENSMUSG00000042761.8|melanocortin 2 receptor accessory protein 2 	ENSMUST00000153444.1|Mrap2|ENSMUSG00000042761.8|melanocortin 2 receptor accessory protein 2
mm10_v2_chr6_+_86404219_86404240	0.319017	Crx_Gsc	ENSMUST00000095754.3|Tia1|ENSMUSG00000071337.5|cytotoxic granule-associated RNA binding protein 1 	ENSMUST00000095753.2|Tia1|ENSMUSG00000071337.5|cytotoxic granule-associated RNA binding protein 1
mm10_v2_chr6_+_86404257_86404319	0.307511	Crx_Gsc	ENSMUST00000095752.2|Tia1|ENSMUSG00000071337.5|cytotoxic granule-associated RNA binding protein 1 	ENSMUST00000130967.1|Tia1|ENSMUSG00000071337.5|cytotoxic granule-associated RNA binding protein 1
mm10_v2_chr19_+_3767397_3767523	0.305934	Crx_Gsc	ENSMUST00000113974.4|Suv420h1|ENSMUSG00000045098.12|suppressor of variegation 4-20 homolog 1 (Drosophila) 	ENSMUST00000113972.2|Suv420h1|ENSMUSG00000045098.12|suppressor of variegation 4-20 homolog 1 (Drosophila) 	ENSMUST00000113973.1|Suv420h1|ENSMUSG00000045098.12|suppressor of variegation 4-20 homolog 1 (Drosophila) 	ENSMUST00000113977.2|Suv420h1|ENSMUSG00000045098.12|suppressor of variegation 4-20 homolog 1 (Drosophila) 	ENSMUST00000052699.6|Suv420h1|ENSMUSG00000045098.12|suppressor of variegation 4-20 homolog 1 (Drosophila) 	ENSMUST00000113968.2|Suv420h1|ENSMUSG00000045098.12|suppressor of variegation 4-20 homolog 1 (Drosophila)
mm10_v2_chr18_+_37489465_37489465	0.30187	Crx_Gsc	ENSMUST00000055949.2|Pcdhb18|ENSMUSG00000048347.4|protocadherin beta 18
mm10_v2_chr4_+_12906838_12906881	0.301043	Crx_Gsc	ENSMUST00000143186.1|Triqk|ENSMUSG00000055963.6|triple QxxK/R motif containing 	ENSMUST00000183345.1|Triqk|ENSMUSG00000055963.6|triple QxxK/R motif containing
mm10_v2_chr13_+_119462752_119462810	0.300412	Crx_Gsc	ENSMUST00000026519.8|4833420G17Rik|ENSMUSG00000062822.7|RIKEN cDNA 4833420G17 gene
mm10_v2_chr11_-_69837781_69837787	0.296439	Crx_Gsc	ENSMUST00000108634.2|Nlgn2|ENSMUSG00000051790.9|neuroligin 2
mm10_v2_chr12_+_55124528_55124528	0.295313	Crx_Gsc	ENSMUST00000177768.1|Fam177a|ENSMUSG00000095595.1|family with sequence similarity 177, member A
mm10_v2_chr2_+_19344820_19344937	0.293948	Crx_Gsc	ENSMUST00000150514.1|4930447M23Rik|ENSMUSG00000087674.1|RIKEN cDNA 4930447M23 gene 	ENSMUST00000136456.1|4930447M23Rik|ENSMUSG00000087674.1|RIKEN cDNA 4930447M23 gene
mm10_v2_chr14_-_105177263_105177277	0.292183	Crx_Gsc	ENSMUST00000163499.1|Rbm26|ENSMUSG00000022119.9|RNA binding motif protein 26
mm10_v2_chr17_-_10320229_10320346	0.287825	Crx_Gsc	ENSMUST00000053066.6|Qk|ENSMUSG00000044407.6|quaking
mm10_v2_chr10_-_56228636_56228695	0.285666	Crx_Gsc	ENSMUST00000099739.3|Tbc1d32|ENSMUSG00000038122.8|TBC1 domain family, member 32
mm10_v2_chr5_+_13399309_13399382	0.272069	Crx_Gsc	ENSMUST00000030714.7|Sema3a|ENSMUSG00000028883.11|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A 	ENSMUST00000141968.1|Sema3a|ENSMUSG00000028883.11|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A
mm10_v2_chr1_-_44218952_44218961	0.271403	Crx_Gsc	ENSMUST00000054801.3|Mettl21e|ENSMUSG00000046828.3|methyltransferase like 21E
mm10_v2_chr4_+_84884366_84884407	0.259502	Crx_Gsc	ENSMUST00000102819.3|Cntln|ENSMUSG00000038070.9|centlein, centrosomal protein
mm10_v2_chr5_-_92278155_92278171	0.25911	Crx_Gsc	ENSMUST00000159345.1|Naaa|ENSMUSG00000029413.8|N-acylethanolamine acid amidase 	ENSMUST00000113102.3|Naaa|ENSMUSG00000029413.8|N-acylethanolamine acid amidase
mm10_v2_chr11_-_29247208_29247409	0.258411	Crx_Gsc	ENSMUST00000020754.3|Ccdc104|ENSMUSG00000020462.8|coiled-coil domain containing 104
mm10_v2_chr10_-_62379852_62379917	0.246834	Crx_Gsc	ENSMUST00000143236.1|Hk1|ENSMUSG00000037012.12|hexokinase 1 	ENSMUST00000133429.1|Hk1|ENSMUSG00000037012.12|hexokinase 1 	ENSMUST00000132926.1|Hk1|ENSMUSG00000037012.12|hexokinase 1 	ENSMUST00000116238.2|Hk1|ENSMUSG00000037012.12|hexokinase 1
mm10_v2_chr14_-_105177280_105177334	0.243434	Crx_Gsc	ENSMUST00000100327.3|Rbm26|ENSMUSG00000022119.9|RNA binding motif protein 26 	ENSMUST00000022715.7|Rbm26|ENSMUSG00000022119.9|RNA binding motif protein 26
mm10_v2_chr1_+_137966529_137966532	0.241041	Crx_Gsc	ENSMUST00000182158.1|A430106G13Rik|ENSMUSG00000098206.1|RIKEN cDNA A430106G13 gene
mm10_v2_chr9_+_88581036_88581036	0.234277	Crx_Gsc	ENSMUST00000164661.2|Trim43a|ENSMUSG00000090693.2|tripartite motif-containing 43A
mm10_v2_chr2_+_69861562_69861584	0.226265	Crx_Gsc	ENSMUST00000090852.4|Ssb|ENSMUSG00000068882.7|Sjogren syndrome antigen B 	ENSMUST00000166411.1|Ssb|ENSMUSG00000068882.7|Sjogren syndrome antigen B
mm10_v2_chr7_-_134938264_134938430	0.224694	Crx_Gsc	ENSMUST00000171394.1|Fam196a|ENSMUSG00000073805.4|family with sequence similarity 196, member A
mm10_v2_chr9_+_108991902_108991969	0.224397	Crx_Gsc	ENSMUST00000147989.1|Pfkfb4|ENSMUSG00000025648.11|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4 	ENSMUST00000051873.8|Pfkfb4|ENSMUSG00000025648.11|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4
mm10_v2_chr5_-_34513892_34513991	0.217785	Crx_Gsc	ENSMUST00000114359.1|Tnip2|ENSMUSG00000059866.7|TNFAIP3 interacting protein 2 	ENSMUST00000030991.7|Tnip2|ENSMUSG00000059866.7|TNFAIP3 interacting protein 2 	ENSMUST00000087737.3|Tnip2|ENSMUSG00000059866.7|TNFAIP3 interacting protein 2
mm10_v2_chrX_-_75578188_75578247	0.215522	Crx_Gsc	ENSMUST00000033545.5|Rab39b|ENSMUSG00000031202.5|RAB39B, member RAS oncogene family
mm10_v2_chr10_-_62327757_62327768	0.215465	Crx_Gsc	ENSMUST00000139228.1|Hk1|ENSMUSG00000037012.12|hexokinase 1
mm10_v2_chr9_+_109051090_109051104	0.212839	Crx_Gsc	ENSMUST00000059097.8|Shisa5|ENSMUSG00000025647.10|shisa homolog 5 (Xenopus laevis)
mm10_v2_chr1_+_74153981_74154003	0.212438	Crx_Gsc	ENSMUST00000027372.7|Cxcr2|ENSMUSG00000026180.7|chemokine (C-X-C motif) receptor 2 	ENSMUST00000106899.2|Cxcr2|ENSMUSG00000026180.7|chemokine (C-X-C motif) receptor 2
mm10_v2_chr14_+_64588112_64588120	0.212092	Crx_Gsc	ENSMUST00000181808.1|A930011O12Rik|ENSMUSG00000097545.1|RIKEN cDNA A930011O12 gene
mm10_v2_chr7_+_7171330_7171373	0.210811	Crx_Gsc	ENSMUST00000051435.7|Zfp418|ENSMUSG00000034538.7|zinc finger protein 418
mm10_v2_chr17_-_25570678_25570694	0.206671	Crx_Gsc	ENSMUST00000025003.3|Sox8|ENSMUSG00000024176.4|SRY-box containing gene 8 	ENSMUST00000173447.1|Sox8|ENSMUSG00000024176.4|SRY-box containing gene 8
mm10_v2_chr10_+_82378593_82378593	0.204537	Crx_Gsc	ENSMUST00000165906.1|Gm4924|ENSMUSG00000073427.3|predicted gene 4924
mm10_v2_chr2_+_3770673_3770708	0.202036	Crx_Gsc	ENSMUST00000177037.1|Fam107b|ENSMUSG00000026655.8|family with sequence similarity 107, member B
mm10_v2_chr10_+_111972664_111972805	0.201945	Crx_Gsc	ENSMUST00000163048.1|Krr1|ENSMUSG00000063334.10|KRR1, small subunit (SSU) processome component, homolog (yeast) 	ENSMUST00000174653.1|Krr1|ENSMUSG00000063334.10|KRR1, small subunit (SSU) processome component, homolog (yeast)
mm10_v2_chr5_-_142608785_142608808	0.196534	Crx_Gsc	ENSMUST00000037048.7|Mmd2|ENSMUSG00000039533.7|monocyte to macrophage differentiation-associated 2
mm10_v2_chr11_+_69622024_69622101	0.192934	Crx_Gsc	ENSMUST00000108656.2|Sat2|ENSMUSG00000069835.4|spermidine/spermine N1-acetyl transferase 2 	ENSMUST00000092969.1|Sat2|ENSMUSG00000069835.4|spermidine/spermine N1-acetyl transferase 2
mm10_v2_chr9_+_45370185_45370208	0.191218	Crx_Gsc	ENSMUST00000085939.6|Fxyd6|ENSMUSG00000066705.6|FXYD domain-containing ion transport regulator 6
mm10_v2_chr1_-_121327672_121327690	0.191208	Crx_Gsc	ENSMUST00000159085.1|Insig2|ENSMUSG00000003721.8|insulin induced gene 2 	ENSMUST00000159125.1|Insig2|ENSMUSG00000003721.8|insulin induced gene 2 	ENSMUST00000161818.1|Insig2|ENSMUSG00000003721.8|insulin induced gene 2
mm10_v2_chr5_-_139484475_139484549	0.190441	Crx_Gsc	ENSMUST00000110851.1|Zfand2a|ENSMUSG00000053581.7|zinc finger, AN1-type domain 2A 	ENSMUST00000079996.6|Zfand2a|ENSMUSG00000053581.7|zinc finger, AN1-type domain 2A
mm10_v2_chr13_+_49608030_49608071	0.190132	Crx_Gsc	ENSMUST00000021822.5|Ogn|ENSMUSG00000021390.5|osteoglycin
mm10_v2_chr14_-_20546512_20546582	0.189156	Crx_Gsc	ENSMUST00000022355.4|Ppp3cb|ENSMUSG00000021816.4|protein phosphatase 3, catalytic subunit, beta isoform 	ENSMUST00000161445.1|Ppp3cb|ENSMUSG00000021816.4|protein phosphatase 3, catalytic subunit, beta isoform 	ENSMUST00000159027.1|Ppp3cb|ENSMUSG00000021816.4|protein phosphatase 3, catalytic subunit, beta isoform
mm10_v2_chrX_+_74304992_74305036	0.187482	Crx_Gsc	ENSMUST00000015435.4|Gdi1|ENSMUSG00000015291.4|guanosine diphosphate (GDP) dissociation inhibitor 1
mm10_v2_chrX_+_38600626_38600691	0.187205	Crx_Gsc	ENSMUST00000000365.2|Mcts1|ENSMUSG00000000355.7|malignant T cell amplified sequence 1
mm10_v2_chr4_-_14621494_14621506	0.183629	Crx_Gsc	ENSMUST00000149633.1|Slc26a7|ENSMUSG00000040569.7|solute carrier family 26, member 7
mm10_v2_chr9_+_37528071_37528148	0.18152	Crx_Gsc	ENSMUST00000002011.7|Esam|ENSMUSG00000001946.7|endothelial cell-specific adhesion molecule
mm10_v2_chr9_-_13827029_13827129	0.178552	Crx_Gsc	ENSMUST00000148086.1|Cep57|ENSMUSG00000031922.6|centrosomal protein 57 	ENSMUST00000034398.5|Cep57|ENSMUSG00000031922.6|centrosomal protein 57
mm10_v2_chr17_-_24455265_24455345	0.178482	Crx_Gsc	ENSMUST00000056032.7|E4f1|ENSMUSG00000024137.8|E4F transcription factor 1
mm10_v2_chr10_-_17947997_17948098	0.178366	Crx_Gsc	ENSMUST00000037879.6|Heca|ENSMUSG00000039879.8|headcase homolog (Drosophila)
mm10_v2_chr13_-_92354943_92355025	0.177795	Crx_Gsc	ENSMUST00000022220.6|Msh3|ENSMUSG00000014850.9|mutS homolog 3 (E. coli)
mm10_v2_chr7_+_24399606_24399673	0.175529	Crx_Gsc	ENSMUST00000002280.4|Smg9|ENSMUSG00000002210.5|smg-9 homolog, nonsense mediated mRNA decay factor (C. elegans)
mm10_v2_chr7_-_103741322_103741322	0.174158	Crx_Gsc	ENSMUST00000051346.2|Olfr629|ENSMUSG00000047545.2|olfactory receptor 629
mm10_v2_chr11_+_67966442_67966497	0.172517	Crx_Gsc	ENSMUST00000021286.4|Stx8|ENSMUSG00000020903.7|syntaxin 8 	ENSMUST00000108675.1|Stx8|ENSMUSG00000020903.7|syntaxin 8
mm10_v2_chrX_-_103186618_103186671	0.172383	Crx_Gsc	ENSMUST00000121720.1|Nap1l2|ENSMUSG00000082229.1|nucleosome assembly protein 1-like 2
mm10_v2_chr11_-_100472725_100472759	0.168982	Crx_Gsc	ENSMUST00000056665.3|Klhl11|ENSMUSG00000048732.5|kelch-like 11
mm10_v2_chr10_+_128267997_128267997	0.167162	Crx_Gsc	ENSMUST00000050901.2|Apof|ENSMUSG00000047631.2|apolipoprotein F
mm10_v2_chr2_+_62664279_62664300	0.165075	Crx_Gsc	ENSMUST00000028257.2|Gca|ENSMUSG00000026893.4|grancalcin
mm10_v2_chr2_+_69861638_69861686	0.162468	Crx_Gsc	ENSMUST00000112260.1|Ssb|ENSMUSG00000068882.7|Sjogren syndrome antigen B
mm10_v2_chr4_-_82859571_82859679	0.161755	Crx_Gsc	ENSMUST00000156055.1|Zdhhc21|ENSMUSG00000028403.9|zinc finger, DHHC domain containing 21 	ENSMUST00000030110.8|Zdhhc21|ENSMUSG00000028403.9|zinc finger, DHHC domain containing 21
mm10_v2_chr5_+_143758293_143758363	0.154095	Crx_Gsc	ENSMUST00000180951.1|D130017N08Rik|ENSMUSG00000097287.1|RIKEN cDNA D130017N08 gene
mm10_v2_chr14_-_77036081_77036081	0.152886	Crx_Gsc	ENSMUST00000142300.1|Lacc1|ENSMUSG00000044350.8|laccase (multicopper oxidoreductase) domain containing 1
mm10_v2_chr3_-_59344256_59344367	0.15013	Crx_Gsc	ENSMUST00000039419.6|Igsf10|ENSMUSG00000036334.7|immunoglobulin superfamily, member 10
mm10_v2_chr2_+_29761528_29761567	0.149971	Crx_Gsc	ENSMUST00000113810.2|Gm13547|ENSMUSG00000075425.4|predicted gene 13547 	ENSMUST00000113809.2|Gm13547|ENSMUSG00000075425.4|predicted gene 13547 	ENSMUST00000113808.2|Gm13547|ENSMUSG00000075425.4|predicted gene 13547
mm10_v2_chr16_-_55838827_55838899	0.147431	Crx_Gsc	ENSMUST00000096026.2|Nfkbiz|ENSMUSG00000035356.10|nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, zeta 	ENSMUST00000036273.6|Nfkbiz|ENSMUSG00000035356.10|nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, zeta 	ENSMUST00000114457.1|Nfkbiz|ENSMUSG00000035356.10|nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, zeta
mm10_v2_chr17_+_25016068_25016124	0.144822	Crx_Gsc	ENSMUST00000137386.1|Ift140|ENSMUSG00000024169.9|intraflagellar transport 140
mm10_v2_chr3_+_28781305_28781344	0.141464	Crx_Gsc	ENSMUST00000060500.7|Eif5a2|ENSMUSG00000050192.7|eukaryotic translation initiation factor 5A2
mm10_v2_chr16_+_23290464_23290534	0.134608	Crx_Gsc	ENSMUST00000115335.1|St6gal1|ENSMUSG00000022885.9|beta galactoside alpha 2,6 sialyltransferase 1
mm10_v2_chr10_-_59616667_59616695	0.134158	Crx_Gsc	ENSMUST00000020312.6|Mcu|ENSMUSG00000009647.7|mitochondrial calcium uniporter
mm10_v2_chr7_-_46795661_46795722	0.131403	Crx_Gsc	ENSMUST00000123725.1|Hps5|ENSMUSG00000014418.9|Hermansky-Pudlak syndrome 5 homolog (human)
mm10_v2_chr2_-_32381909_32381938	0.131153	Crx_Gsc	ENSMUST00000048792.4|1110008P14Rik|ENSMUSG00000039195.4|RIKEN cDNA 1110008P14 gene
mm10_v2_chr1_+_24678536_24678609	0.129031	Crx_Gsc	ENSMUST00000095062.3|Lmbrd1|ENSMUSG00000073725.2|LMBR1 domain containing 1
mm10_v2_chr9_-_50617228_50617289	0.127912	Crx_Gsc	ENSMUST00000147671.1|AU019823|ENSMUSG00000059820.8|expressed sequence AU019823 	ENSMUST00000145139.1|AU019823|ENSMUSG00000059820.8|expressed sequence AU019823 	ENSMUST00000155435.1|AU019823|ENSMUSG00000059820.8|expressed sequence AU019823
mm10_v2_chr7_+_6474088_6474088	0.12753	Crx_Gsc	ENSMUST00000056144.5|Olfr1346|ENSMUSG00000054938.4|olfactory receptor 1346
mm10_v2_chr18_+_3471630_3471630	0.123795	Crx_Gsc	ENSMUST00000179907.1|G430049J08Rik|ENSMUSG00000096528.1|RIKEN cDNA G430049J08 gene
mm10_v2_chr16_-_94526830_94526839	0.123021	Crx_Gsc	ENSMUST00000023615.6|Dscr3|ENSMUSG00000022898.6|Down syndrome critical region gene 3
mm10_v2_chr3_-_89365233_89365253	0.12154	Crx_Gsc	ENSMUST00000070820.6|Dcst1|ENSMUSG00000042672.9|DC-STAMP domain containing 1
mm10_v2_chr6_-_149101506_149101589	0.12029	Crx_Gsc	ENSMUST00000127727.1|Dennd5b|ENSMUSG00000030313.9|DENN/MADD domain containing 5B
mm10_v2_chr11_+_95010277_95010293	0.119334	Crx_Gsc	ENSMUST00000124735.1|Samd14|ENSMUSG00000047181.6|sterile alpha motif domain containing 14
mm10_v2_chr7_-_43533171_43533209	0.118628	Crx_Gsc	ENSMUST00000004728.5|Cd33|ENSMUSG00000004609.5|CD33 antigen 	ENSMUST00000039861.5|Cd33|ENSMUSG00000004609.5|CD33 antigen
mm10_v2_chr7_+_28825202_28825217	0.117895	Crx_Gsc	ENSMUST00000066264.6|Ech1|ENSMUSG00000053898.6|enoyl coenzyme A hydratase 1, peroxisomal
mm10_v2_chr10_-_39899238_39899238	0.115011	Crx_Gsc	ENSMUST00000178563.1|AA474331|ENSMUSG00000096687.1|expressed sequence AA474331
mm10_v2_chr1_-_43827751_43827800	0.114658	Crx_Gsc	ENSMUST00000128261.1|Uxs1|ENSMUSG00000057363.6|UDP-glucuronate decarboxylase 1 	ENSMUST00000126008.1|Uxs1|ENSMUSG00000057363.6|UDP-glucuronate decarboxylase 1 	ENSMUST00000139451.1|Uxs1|ENSMUSG00000057363.6|UDP-glucuronate decarboxylase 1
mm10_v2_chr10_-_32890462_32890462	0.112712	Crx_Gsc	ENSMUST00000092602.1|Nkain2|ENSMUSG00000069670.1|Na+/K+ transporting ATPase interacting 2
mm10_v2_chr1_-_152625212_152625220	0.11226	Crx_Gsc	ENSMUST00000027760.7|Rgl1|ENSMUSG00000026482.7|ral guanine nucleotide dissociation stimulator,-like 1
mm10_v2_chr19_+_5024006_5024155	0.111831	Crx_Gsc	ENSMUST00000025826.5|Slc29a2|ENSMUSG00000024891.5|solute carrier family 29 (nucleoside transporters), member 2
mm10_v2_chr11_+_115475645_115475727	0.109502	Crx_Gsc	ENSMUST00000035240.6|Armc7|ENSMUSG00000057219.5|armadillo repeat containing 7
mm10_v2_chr6_-_134566913_134566995	0.10817	Crx_Gsc	ENSMUST00000032322.8|Lrp6|ENSMUSG00000030201.9|low density lipoprotein receptor-related protein 6
mm10_v2_chr10_-_4432312_4432388	0.104084	Crx_Gsc	ENSMUST00000126102.1|Rmnd1|ENSMUSG00000019763.5|required for meiotic nuclear division 1 homolog (S. cerevisiae) 	ENSMUST00000131853.1|Rmnd1|ENSMUSG00000019763.5|required for meiotic nuclear division 1 homolog (S. cerevisiae) 	ENSMUST00000042251.4|Rmnd1|ENSMUSG00000019763.5|required for meiotic nuclear division 1 homolog (S. cerevisiae)
mm10_v2_chr13_-_90089060_90089092	0.10355	Crx_Gsc	ENSMUST00000161396.1|Xrcc4|ENSMUSG00000021615.7|X-ray repair complementing defective repair in Chinese hamster cells 4
mm10_v2_chr5_-_45450143_45450201	0.102212	Crx_Gsc	ENSMUST00000154962.1|Qdpr|ENSMUSG00000015806.6|quinoid dihydropteridine reductase
mm10_v2_chr5_-_92435219_92435235	0.100058	Crx_Gsc	ENSMUST00000038514.8|Nup54|ENSMUSG00000034826.8|nucleoporin 54
mm10_v2_chr10_-_78487842_78487842	0.0993563	Crx_Gsc	ENSMUST00000069431.4|Gm9978|ENSMUSG00000055704.4|predicted gene 9978
mm10_v2_chr13_+_54789377_54789497	0.0988246	Crx_Gsc	ENSMUST00000026993.7|Tspan17|ENSMUSG00000025875.8|tetraspanin 17 	ENSMUST00000131692.2|Tspan17|ENSMUSG00000025875.8|tetraspanin 17 	ENSMUST00000163796.1|Tspan17|ENSMUSG00000025875.8|tetraspanin 17
mm10_v2_chr3_+_142496924_142496939	0.0958507	Crx_Gsc	ENSMUST00000090127.2|Gbp5|ENSMUSG00000040264.8|guanylate binding protein 5
mm10_v2_chr4_-_56947411_56947447	0.0957254	Crx_Gsc	ENSMUST00000107609.3|Tmem245|ENSMUSG00000055296.8|transmembrane protein 245 	ENSMUST00000068792.6|Tmem245|ENSMUSG00000055296.8|transmembrane protein 245
mm10_v2_chr11_-_48871344_48871407	0.0944809	Crx_Gsc	ENSMUST00000049519.3|Irgm1|ENSMUSG00000046879.6|immunity-related GTPase family M member 1
mm10_v2_chr8_-_94876269_94876321	0.0914443	Crx_Gsc	ENSMUST00000046461.7|Dok4|ENSMUSG00000040631.7|docking protein 4
mm10_v2_chr19_-_10881723_10881766	0.0909631	Crx_Gsc	ENSMUST00000144681.1|Tmem109|ENSMUSG00000034659.8|transmembrane protein 109
mm10_v2_chr16_-_63864114_63864182	0.090635	Crx_Gsc	ENSMUST00000064405.6|Epha3|ENSMUSG00000052504.6|Eph receptor A3
mm10_v2_chr10_+_80855275_80855322	0.0893871	Crx_Gsc	ENSMUST00000035597.8|Sppl2b|ENSMUSG00000035206.9|signal peptide peptidase like 2B
mm10_v2_chr14_-_87141206_87141239	0.0886291	Crx_Gsc	ENSMUST00000022599.7|Diap3|ENSMUSG00000022021.7|diaphanous homolog 3 (Drosophila)
mm10_v2_chr8_-_60954726_60954790	0.088315	Crx_Gsc	ENSMUST00000110302.1|Clcn3|ENSMUSG00000004319.9|chloride channel 3
mm10_v2_chr11_-_59809774_59810016	0.0878534	Crx_Gsc	ENSMUST00000047706.2|Flcn|ENSMUSG00000032633.6|folliculin 	ENSMUST00000102697.3|Flcn|ENSMUSG00000032633.6|folliculin
mm10_v2_chr17_+_47385386_47385404	0.0862361	Crx_Gsc	ENSMUST00000024774.7|Guca1b|ENSMUSG00000023979.8|guanylate cyclase activator 1B 	ENSMUST00000145462.1|Guca1b|ENSMUSG00000023979.8|guanylate cyclase activator 1B
mm10_v2_chr17_-_66519666_66519727	0.0814207	Crx_Gsc	ENSMUST00000167962.1|Rab12|ENSMUSG00000023460.6|RAB12, member RAS oncogene family 	ENSMUST00000070538.4|Rab12|ENSMUSG00000023460.6|RAB12, member RAS oncogene family
mm10_v2_chr8_-_79711631_79711740	0.079106	Crx_Gsc	ENSMUST00000080536.6|Abce1|ENSMUSG00000058355.6|ATP-binding cassette, sub-family E (OABP), member 1
mm10_v2_chr6_+_17749170_17749265	0.0786771	Crx_Gsc	ENSMUST00000053148.7|St7|ENSMUSG00000029534.11|suppression of tumorigenicity 7 	ENSMUST00000115417.3|St7|ENSMUSG00000029534.11|suppression of tumorigenicity 7
mm10_v2_chr1_-_163403627_163403679	0.0775801	Crx_Gsc	ENSMUST00000045138.4|Gorab|ENSMUSG00000040124.4|golgin, RAB6-interacting
mm10_v2_chr5_+_124552845_124552903	0.0768924	Crx_Gsc	ENSMUST00000071057.7|Ddx55|ENSMUSG00000029389.11|DEAD (Asp-Glu-Ala-Asp) box polypeptide 55
mm10_v2_chr1_-_155232710_155232729	0.076786	Crx_Gsc	ENSMUST00000035914.3|BC034090|ENSMUSG00000033722.3|cDNA sequence BC034090
mm10_v2_chr15_-_64382908_64382936	0.0767749	Crx_Gsc	ENSMUST00000177374.1|Asap1|ENSMUSG00000022377.10|ArfGAP with SH3 domain, ankyrin repeat and PH domain1 	ENSMUST00000023008.9|Asap1|ENSMUSG00000022377.10|ArfGAP with SH3 domain, ankyrin repeat and PH domain1 	ENSMUST00000110115.2|Asap1|ENSMUSG00000022377.10|ArfGAP with SH3 domain, ankyrin repeat and PH domain1 	ENSMUST00000110114.3|Asap1|ENSMUSG00000022377.10|ArfGAP with SH3 domain, ankyrin repeat and PH domain1
mm10_v2_chr4_+_43493345_43493430	0.0748711	Crx_Gsc	ENSMUST00000030181.5|Ccdc107|ENSMUSG00000028461.6|coiled-coil domain containing 107 	ENSMUST00000107922.2|Ccdc107|ENSMUSG00000028461.6|coiled-coil domain containing 107
mm10_v2_chr8_+_3393018_3393073	0.0738852	Crx_Gsc	ENSMUST00000004684.6|Arhgef18|ENSMUSG00000004568.6|rho/rac guanine nucleotide exchange factor (GEF) 18 	ENSMUST00000145394.1|Arhgef18|ENSMUSG00000004568.6|rho/rac guanine nucleotide exchange factor (GEF) 18
mm10_v2_chr1_-_52490736_52490736	0.073124	Crx_Gsc	ENSMUST00000170269.1|Nab1|ENSMUSG00000002881.8|Ngfi-A binding protein 1
mm10_v2_chr19_-_8880883_8880933	0.071583	Crx_Gsc	ENSMUST00000096253.5|AI462493|ENSMUSG00000071654.5|expressed sequence AI462493
mm10_v2_chr2_-_9878580_9878607	0.0703206	Crx_Gsc	ENSMUST00000102976.3|Gata3|ENSMUSG00000015619.10|GATA binding protein 3
mm10_v2_chr8_-_34107816_34107852	0.0697824	Crx_Gsc	ENSMUST00000118811.1|Dctn6|ENSMUSG00000031516.5|dynactin 6
mm10_v2_chr4_+_48585193_48585215	0.0692791	Crx_Gsc	ENSMUST00000107703.1|Tmeff1|ENSMUSG00000028347.8|transmembrane protein with EGF-like and two follistatin-like domains 1
mm10_v2_chr8_-_104248499_104248569	0.0687789	Crx_Gsc	ENSMUST00000050211.5|Tk2|ENSMUSG00000035824.6|thymidine kinase 2, mitochondrial
mm10_v2_chr8_+_94838321_94838429	0.068314	Crx_Gsc	ENSMUST00000034234.8|Coq9|ENSMUSG00000031782.8|coenzyme Q9 homolog (yeast) 	ENSMUST00000159871.1|Coq9|ENSMUSG00000031782.8|coenzyme Q9 homolog (yeast)
mm10_v2_chr15_+_80133114_80133155	0.0669814	Crx_Gsc	ENSMUST00000023050.7|Tab1|ENSMUSG00000022414.7|TGF-beta activated kinase 1/MAP3K7 binding protein 1
mm10_v2_chr7_-_15879844_15879968	0.0660847	Crx_Gsc	ENSMUST00000172758.1|Crx|ENSMUSG00000041578.9|cone-rod homeobox containing gene 	ENSMUST00000044434.6|Crx|ENSMUSG00000041578.9|cone-rod homeobox containing gene
mm10_v2_chr5_-_96161990_96162097	0.0648878	Crx_Gsc	ENSMUST00000155901.1|Cnot6l|ENSMUSG00000034724.11|CCR4-NOT transcription complex, subunit 6-like
mm10_v2_chr5_+_143651222_143651246	0.0624323	Crx_Gsc	ENSMUST00000110727.1|Cyth3|ENSMUSG00000018001.12|cytohesin 3
mm10_v2_chr4_+_48585135_48585187	0.0616867	Crx_Gsc	ENSMUST00000030032.6|Tmeff1|ENSMUSG00000028347.8|transmembrane protein with EGF-like and two follistatin-like domains 1
mm10_v2_chr9_-_13826946_13826972	0.0605087	Crx_Gsc	ENSMUST00000147115.1|Cep57|ENSMUSG00000031922.6|centrosomal protein 57
mm10_v2_chr18_-_70141568_70141622	0.058457	Crx_Gsc	ENSMUST00000121693.1|Rab27b|ENSMUSG00000024511.9|RAB27b, member RAS oncogene family
mm10_v2_chr8_+_71542911_71542973	0.058347	Crx_Gsc	ENSMUST00000034272.7|Mvb12a|ENSMUSG00000031813.7|multivesicular body subunit 12A
mm10_v2_chr1_+_157458554_157458597	0.0580841	Crx_Gsc	ENSMUST00000046743.4|BC026585|ENSMUSG00000033488.5|cDNA sequence BC026585 	ENSMUST00000119891.1|BC026585|ENSMUSG00000033488.5|cDNA sequence BC026585
mm10_v2_chr18_+_37674303_37674365	0.0557104	Crx_Gsc	ENSMUST00000073447.5|Pcdhga9|ENSMUSG00000023036.8|protocadherin gamma subfamily A, 9
mm10_v2_chr1_+_128244122_128244181	0.0548828	Crx_Gsc	ENSMUST00000027592.3|Ubxn4|ENSMUSG00000026353.3|UBX domain protein 4
mm10_v2_chr16_-_4939579_4939603	0.0548552	Crx_Gsc	ENSMUST00000181498.1|Gm16861|ENSMUSG00000097397.1|predicted gene, 16861
mm10_v2_chr7_-_44986313_44986492	0.05483	Crx_Gsc	ENSMUST00000045325.6|Prmt1|ENSMUSG00000052429.11|protein arginine N-methyltransferase 1 	ENSMUST00000085387.4|Prmt1|ENSMUSG00000052429.11|protein arginine N-methyltransferase 1 	ENSMUST00000107840.1|Prmt1|ENSMUSG00000052429.11|protein arginine N-methyltransferase 1 	ENSMUST00000107843.3|Prmt1|ENSMUSG00000052429.11|protein arginine N-methyltransferase 1 	ENSMUST00000107842.3|Prmt1|ENSMUSG00000052429.11|protein arginine N-methyltransferase 1
mm10_v2_chr8_-_41054771_41054802	0.0524094	Crx_Gsc	ENSMUST00000093534.4|Mtus1|ENSMUSG00000045636.10|mitochondrial tumor suppressor 1
mm10_v2_chr8_-_70873477_70873501	0.0523164	Crx_Gsc	ENSMUST00000007865.5|Ccdc124|ENSMUSG00000007721.5|coiled-coil domain containing 124
mm10_v2_chr7_-_133123770_133123876	0.0515499	Crx_Gsc	ENSMUST00000164896.1|Ctbp2|ENSMUSG00000030970.10|C-terminal binding protein 2 	ENSMUST00000171968.1|Ctbp2|ENSMUSG00000030970.10|C-terminal binding protein 2
mm10_v2_chr13_+_108046411_108046424	0.0511698	Crx_Gsc	ENSMUST00000095458.4|Smim15|ENSMUSG00000071180.4|small integral membrane protein 15
mm10_v2_chr9_-_109074049_109074140	0.050685	Crx_Gsc	ENSMUST00000161521.1|Atrip|ENSMUSG00000025646.2|ATR interacting protein 	ENSMUST00000045011.2|Atrip|ENSMUSG00000025646.2|ATR interacting protein
mm10_v2_chr4_-_108406676_108406745	0.049505	Crx_Gsc	ENSMUST00000184609.1|Gpx7|ENSMUSG00000028597.11|glutathione peroxidase 7
mm10_v2_chr4_-_12087912_12088011	0.049149	Crx_Gsc	ENSMUST00000050686.3|Tmem67|ENSMUSG00000049488.8|transmembrane protein 67
mm10_v2_chr2_+_102658640_102658669	0.0481197	Crx_Gsc	ENSMUST00000080210.3|Slc1a2|ENSMUSG00000005089.9|solute carrier family 1 (glial high affinity glutamate transporter), member 2
mm10_v2_chr16_+_17208135_17208135	0.0466925	Crx_Gsc	ENSMUST00000169803.1|Rimbp3|ENSMUSG00000071636.5|RIMS binding protein 3
mm10_v2_chr15_+_75940952_75941015	0.0465554	Crx_Gsc	ENSMUST00000037260.6|Zfp623|ENSMUSG00000050846.8|zinc finger protein 623
mm10_v2_chr16_+_52031549_52031570	0.0463704	Crx_Gsc	ENSMUST00000114471.1|Cblb|ENSMUSG00000022637.10|Casitas B-lineage lymphoma b
mm10_v2_chr11_-_48871408_48871424	0.0463592	Crx_Gsc	ENSMUST00000097271.2|Irgm1|ENSMUSG00000046879.6|immunity-related GTPase family M member 1
mm10_v2_chr9_+_27030159_27030197	0.0423033	Crx_Gsc	ENSMUST00000073127.7|Ncapd3|ENSMUSG00000035024.9|non-SMC condensin II complex, subunit D3 	ENSMUST00000086198.4|Ncapd3|ENSMUSG00000035024.9|non-SMC condensin II complex, subunit D3
mm10_v2_chr11_+_120598421_120598518	0.0421214	Crx_Gsc	ENSMUST00000026128.3|Anapc11|ENSMUSG00000025135.6|anaphase promoting complex subunit 11
mm10_v2_chr10_+_75037066_75037100	0.0383522	Crx_Gsc	ENSMUST00000147802.1|Rab36|ENSMUSG00000020175.7|RAB36, member RAS oncogene family 	ENSMUST00000020391.5|Rab36|ENSMUSG00000020175.7|RAB36, member RAS oncogene family
mm10_v2_chr10_-_127288851_127288918	0.037651	Crx_Gsc	ENSMUST00000156208.1|Mbd6|ENSMUSG00000025409.8|methyl-CpG binding domain protein 6 	ENSMUST00000026476.6|Mbd6|ENSMUSG00000025409.8|methyl-CpG binding domain protein 6
mm10_v2_chr10_+_80930071_80930091	0.0370377	Crx_Gsc	ENSMUST00000015456.8|Gadd45b|ENSMUSG00000015312.8|growth arrest and DNA-damage-inducible 45 beta
mm10_v2_chr17_+_25786566_25786584	0.0364842	Crx_Gsc	ENSMUST00000095500.4|Ccdc78|ENSMUSG00000071202.4|coiled-coil domain containing 78
mm10_v2_chr4_-_134535382_134535391	0.034815	Crx_Gsc	ENSMUST00000116279.3|Mtfr1l|ENSMUSG00000046671.12|mitochondrial fission regulator 1-like 	ENSMUST00000146808.1|Mtfr1l|ENSMUSG00000046671.12|mitochondrial fission regulator 1-like
mm10_v2_chr17_-_25941926_25942048	0.0339889	Crx_Gsc	ENSMUST00000139226.1|Pigq|ENSMUSG00000025728.8|phosphatidylinositol glycan anchor biosynthesis, class Q 	ENSMUST00000097368.3|Pigq|ENSMUSG00000025728.8|phosphatidylinositol glycan anchor biosynthesis, class Q 	ENSMUST00000026823.8|Pigq|ENSMUSG00000025728.8|phosphatidylinositol glycan anchor biosynthesis, class Q
mm10_v2_chr14_+_65266701_65266752	0.033324	Crx_Gsc	ENSMUST00000169656.1|Fbxo16|ENSMUSG00000034532.8|F-box protein 16
mm10_v2_chr15_+_102326116_102326152	0.0319813	Crx_Gsc	ENSMUST00000166658.1|Pfdn5|ENSMUSG00000001289.6|prefoldin 5 	ENSMUST00000062492.4|Pfdn5|ENSMUSG00000001289.6|prefoldin 5
mm10_v2_chr13_-_66227573_66227573	0.0315004	Crx_Gsc	ENSMUST00000167981.2|Gm10772|ENSMUSG00000091347.2|predicted gene 10772
mm10_v2_chr11_-_98149551_98149621	0.0311764	Crx_Gsc	ENSMUST00000103143.3|Fbxl20|ENSMUSG00000020883.12|F-box and leucine-rich repeat protein 20
mm10_v2_chr7_-_141435327_141435397	0.0310948	Crx_Gsc	ENSMUST00000138865.1|Slc25a22|ENSMUSG00000019082.11|solute carrier family 25 (mitochondrial carrier, glutamate), member 22
mm10_v2_chr19_-_10881677_10881717	0.0309727	Crx_Gsc	ENSMUST00000128835.1|Tmem109|ENSMUSG00000034659.8|transmembrane protein 109
mm10_v2_chr16_+_11405648_11405713	0.0309111	Crx_Gsc	ENSMUST00000096273.2|Snx29|ENSMUSG00000071669.8|sorting nexin 29
mm10_v2_chr7_-_141172809_141172862	0.0294574	Crx_Gsc	ENSMUST00000167493.1|Rnh1|ENSMUSG00000038650.8|ribonuclease/angiogenin inhibitor 1
mm10_v2_chr4_+_21727695_21727716	0.0286107	Crx_Gsc	ENSMUST00000065928.4|Ccnc|ENSMUSG00000028252.14|cyclin C
mm10_v2_chr5_-_103977360_103977403	0.0285041	Crx_Gsc	ENSMUST00000048118.8|Hsd17b13|ENSMUSG00000034528.9|hydroxysteroid (17-beta) dehydrogenase 13
mm10_v2_chr4_-_43025756_43025788	0.0282091	Crx_Gsc	ENSMUST00000098109.2|Pigo|ENSMUSG00000028454.10|phosphatidylinositol glycan anchor biosynthesis, class O
mm10_v2_chr10_-_127288999_127289035	0.0274712	Crx_Gsc	ENSMUST00000119078.1|Mbd6|ENSMUSG00000025409.8|methyl-CpG binding domain protein 6
mm10_v2_chr5_-_5694559_5694581	0.0269124	Crx_Gsc	ENSMUST00000115426.2|Steap2|ENSMUSG00000015653.7|six transmembrane epithelial antigen of prostate 2
mm10_v2_chr2_-_130664565_130664659	0.0269054	Crx_Gsc	ENSMUST00000089559.4|Ddrgk1|ENSMUSG00000068290.5|DDRGK domain containing 1
mm10_v2_chr6_-_34977999_34977999	0.0256415	Crx_Gsc	ENSMUST00000044387.7|2010107G12Rik|ENSMUSG00000029847.7|RIKEN cDNA 2010107G12 gene
mm10_v2_chr3_-_63964768_63964785	0.0255924	Crx_Gsc	ENSMUST00000029402.8|Slc33a1|ENSMUSG00000027822.10|solute carrier family 33 (acetyl-CoA transporter), member 1
mm10_v2_chr16_+_13109682_13109693	0.023891	Crx_Gsc	ENSMUST00000023206.7|Ercc4|ENSMUSG00000022545.7|excision repair cross-complementing rodent repair deficiency, complementation group 4
mm10_v2_chr10_+_70204675_70204684	0.0237981	Crx_Gsc	ENSMUST00000020090.1|2310015B20Rik|ENSMUSG00000019933.1|RIKEN cDNA 2310015B20 gene
mm10_v2_chrX_+_52791179_52791201	0.0189495	Crx_Gsc	ENSMUST00000101588.1|Ccdc160|ENSMUSG00000073207.1|coiled-coil domain containing 160
mm10_v2_chr13_+_54789500_54789645	0.01836	Crx_Gsc	ENSMUST00000163915.1|Tspan17|ENSMUSG00000025875.8|tetraspanin 17 	ENSMUST00000099503.3|Tspan17|ENSMUSG00000025875.8|tetraspanin 17 	ENSMUST00000171859.1|Tspan17|ENSMUSG00000025875.8|tetraspanin 17
mm10_v2_chr5_-_92310003_92310024	0.0162606	Crx_Gsc	ENSMUST00000031364.1|Sdad1|ENSMUSG00000029415.1|SDA1 domain containing 1
mm10_v2_chr19_-_5366626_5366663	0.0155965	Crx_Gsc	ENSMUST00000025762.8|Banf1|ENSMUSG00000024844.8|barrier to autointegration factor 1
mm10_v2_chr11_-_109722214_109722289	0.0135252	Crx_Gsc	ENSMUST00000020938.7|Fam20a|ENSMUSG00000020614.7|family with sequence similarity 20, member A
mm10_v2_chr10_+_80292453_80292645	0.0129895	Crx_Gsc	ENSMUST00000068408.7|Rps15|ENSMUSG00000063457.8|ribosomal protein S15 	ENSMUST00000062674.6|Rps15|ENSMUSG00000063457.8|ribosomal protein S15
mm10_v2_chr4_-_40703188_40703203	0.012412	Crx_Gsc	ENSMUST00000030119.3|Aptx|ENSMUSG00000028411.9|aprataxin
mm10_v2_chr19_-_32712287_32712336	0.0123766	Crx_Gsc	ENSMUST00000070210.4|Atad1|ENSMUSG00000013662.5|ATPase family, AAA domain containing 1
mm10_v2_chr6_+_86438360_86438405	0.0119134	Crx_Gsc	ENSMUST00000050497.7|C87436|ENSMUSG00000046679.10|expressed sequence C87436
mm10_v2_chr14_-_87141114_87141148	0.0114712	Crx_Gsc	ENSMUST00000168889.1|Diap3|ENSMUSG00000022021.7|diaphanous homolog 3 (Drosophila)
mm10_v2_chr9_+_59539643_59539717	0.0110604	Crx_Gsc	ENSMUST00000026262.6|Hexa|ENSMUSG00000025232.7|hexosaminidase A
mm10_v2_chr10_+_18407658_18407715	0.00945311	Crx_Gsc	ENSMUST00000037341.7|Nhsl1|ENSMUSG00000039835.9|NHS-like 1
mm10_v2_chr11_+_120598532_120598549	0.00871234	Crx_Gsc	ENSMUST00000093140.4|Anapc11|ENSMUSG00000025135.6|anaphase promoting complex subunit 11
mm10_v2_chr4_+_65604984_65605052	0.00778312	Crx_Gsc	ENSMUST00000050850.7|Trim32|ENSMUSG00000051675.7|tripartite motif-containing 32 	ENSMUST00000107366.1|Trim32|ENSMUSG00000051675.7|tripartite motif-containing 32
mm10_v2_chr10_-_127751707_127751737	0.00730245	Crx_Gsc	ENSMUST00000079692.5|Gpr182|ENSMUSG00000058396.7|G protein-coupled receptor 182
mm10_v2_chr5_+_76656512_76656512	0.0061374	Crx_Gsc	ENSMUST00000086909.4|Gm10430|ENSMUSG00000072855.2|predicted gene 10430
mm10_v2_chr11_-_86257518_86257550	0.00429383	Crx_Gsc	ENSMUST00000136469.1|Ints2|ENSMUSG00000018068.7|integrator complex subunit 2 	ENSMUST00000018212.6|Ints2|ENSMUSG00000018068.7|integrator complex subunit 2
mm10_v2_chr11_-_17008647_17008702	0.00400625	Crx_Gsc	ENSMUST00000102881.3|Plek|ENSMUSG00000020120.9|pleckstrin
mm10_v2_chr4_-_40702893_40702937	0.00359736	Crx_Gsc	ENSMUST00000068125.4|Aptx|ENSMUSG00000028411.9|aprataxin
mm10_v2_chr7_-_44257378_44257378	0.00284833	Crx_Gsc	ENSMUST00000107945.1|Acpt|ENSMUSG00000012777.8|acid phosphatase, testicular 	ENSMUST00000118216.1|Acpt|ENSMUSG00000012777.8|acid phosphatase, testicular
mm10_v2_chr4_-_140246751_140246793	0.00184755	Crx_Gsc	ENSMUST00000039331.8|Igsf21|ENSMUSG00000040972.8|immunoglobulin superfamily, member 21
mm10_v2_chr4_+_120854786_120854843	0.00180134	Crx_Gsc	ENSMUST00000071093.2|Rims3|ENSMUSG00000032890.11|regulating synaptic membrane exocytosis 3
mm10_v2_chr7_-_4532419_4532470	0.000657361	Crx_Gsc	ENSMUST00000094897.4|Dnaaf3|ENSMUSG00000055809.7|dynein, axonemal assembly factor 3
