mm10_v2_chr9_+_53850243_53850257	4.85624	Foxa3	ENSMUST00000048485.5|Sln|ENSMUSG00000042045.5|sarcolipin
mm10_v2_chr16_+_91269759_91269778	3.9473	Foxa3	ENSMUST00000056882.5|Olig1|ENSMUSG00000046160.5|oligodendrocyte transcription factor 1
mm10_v2_chr7_-_103813913_103813996	3.00018	Foxa3	ENSMUST00000098192.3|Hbb-bt|ENSMUSG00000073940.3|hemoglobin, beta adult t chain
mm10_v2_chr1_+_17145357_17145431	2.61154	Foxa3	ENSMUST00000026879.7|Gdap1|ENSMUSG00000025777.7|ganglioside-induced differentiation-associated-protein 1
mm10_v2_chr7_-_103827922_103828096	2.23007	Foxa3	ENSMUST00000023934.6|Hbb-bs|ENSMUSG00000052305.5|hemoglobin, beta adult s chain 	ENSMUST00000153218.1|Hbb-bs|ENSMUSG00000052305.5|hemoglobin, beta adult s chain
mm10_v2_chr10_+_60106452_60106468	2.16375	Foxa3	ENSMUST00000165024.2|Spock2|ENSMUSG00000058297.10|sparc/osteonectin, cwcv and kazal-like domains proteoglycan 2
mm10_v2_chr4_+_42916647_42916712	2.05082	Foxa3	ENSMUST00000132173.1|N28178|ENSMUSG00000036062.7|expressed sequence N28178 	ENSMUST00000107975.1|N28178|ENSMUSG00000036062.7|expressed sequence N28178
mm10_v2_chr4_+_102430047_102430079	1.90158	Foxa3	ENSMUST00000172616.1|Pde4b|ENSMUSG00000028525.10|phosphodiesterase 4B, cAMP specific
mm10_v2_chr18_+_67133713_67133826	1.87743	Foxa3	ENSMUST00000076605.7|Gnal|ENSMUSG00000024524.10|guanine nucleotide binding protein, alpha stimulating, olfactory type
mm10_v2_chr13_+_16011851_16011949	1.87448	Foxa3	ENSMUST00000042603.6|Inhba|ENSMUSG00000041324.7|inhibin beta-A
mm10_v2_chr19_+_26623419_26623471	1.70281	Foxa3	ENSMUST00000176584.1|Smarca2|ENSMUSG00000024921.10|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
mm10_v2_chr11_-_26210553_26210585	1.70179	Foxa3	ENSMUST00000101447.3|5730522E02Rik|ENSMUSG00000073101.3|RIKEN cDNA 5730522E02 gene
mm10_v2_chr17_+_70522083_70522145	1.70025	Foxa3	ENSMUST00000148486.1|Dlgap1|ENSMUSG00000003279.10|discs, large (Drosophila) homolog-associated protein 1 	ENSMUST00000133717.1|Dlgap1|ENSMUSG00000003279.10|discs, large (Drosophila) homolog-associated protein 1
mm10_v2_chr8_-_84773381_84773427	1.62795	Foxa3	ENSMUST00000109764.1|Nfix|ENSMUSG00000001911.10|nuclear factor I/X
mm10_v2_chr5_-_103211251_103211334	1.59425	Foxa3	ENSMUST00000060871.5|Mapk10|ENSMUSG00000046709.10|mitogen-activated protein kinase 10 	ENSMUST00000112846.1|Mapk10|ENSMUSG00000046709.10|mitogen-activated protein kinase 10 	ENSMUST00000170792.1|Mapk10|ENSMUSG00000046709.10|mitogen-activated protein kinase 10 	ENSMUST00000112847.2|Mapk10|ENSMUSG00000046709.10|mitogen-activated protein kinase 10
mm10_v2_chr4_+_42922253_42922268	1.57935	Foxa3	ENSMUST00000139100.1|N28178|ENSMUSG00000036062.7|expressed sequence N28178
mm10_v2_chr4_-_116405986_116406120	1.51982	Foxa3	ENSMUST00000123072.1|Mast2|ENSMUSG00000003810.6|microtubule associated serine/threonine kinase 2 	ENSMUST00000144281.1|Mast2|ENSMUSG00000003810.6|microtubule associated serine/threonine kinase 2
mm10_v2_chr13_+_23934434_23934462	1.4429	Foxa3	ENSMUST00000072391.1|Hist1h2aa|ENSMUSG00000060081.1|histone cluster 1, H2aa
mm10_v2_chr2_+_140395309_140395438	1.41853	Foxa3	ENSMUST00000110067.1|Macrod2|ENSMUSG00000068205.8|MACRO domain containing 2 	ENSMUST00000110064.1|Macrod2|ENSMUSG00000068205.8|MACRO domain containing 2 	ENSMUST00000110063.1|Macrod2|ENSMUSG00000068205.8|MACRO domain containing 2 	ENSMUST00000110062.1|Macrod2|ENSMUSG00000068205.8|MACRO domain containing 2 	ENSMUST00000078027.5|Macrod2|ENSMUSG00000068205.8|MACRO domain containing 2 	ENSMUST00000043836.7|Macrod2|ENSMUSG00000068205.8|MACRO domain containing 2
mm10_v2_chr3_+_68584154_68584181	1.41654	Foxa3	ENSMUST00000182997.1|Schip1|ENSMUSG00000027777.9|schwannomin interacting protein 1
mm10_v2_chr7_+_113765998_113766039	1.41027	Foxa3	ENSMUST00000046687.9|Spon1|ENSMUSG00000038156.9|spondin 1, (f-spondin) extracellular matrix protein
mm10_v2_chr18_+_36952621_36952766	1.31552	Foxa3	ENSMUST00000115661.2|Pcdha2|ENSMUSG00000007440.8|protocadherin alpha 2
mm10_v2_chr9_-_112187898_112187938	1.30947	Foxa3	ENSMUST00000178410.1|Arpp21|ENSMUSG00000032503.11|cyclic AMP-regulated phosphoprotein, 21 	ENSMUST00000172380.3|Arpp21|ENSMUSG00000032503.11|cyclic AMP-regulated phosphoprotein, 21
mm10_v2_chr19_+_44992127_44992136	1.30543	Foxa3	ENSMUST00000179305.1|Sema4g|ENSMUSG00000025207.9|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4G
mm10_v2_chr2_-_7395879_7395912	1.29692	Foxa3	ENSMUST00000182404.1|Celf2|ENSMUSG00000002107.12|CUGBP, Elav-like family member 2
mm10_v2_chr9_-_112187766_112187862	1.27929	Foxa3	ENSMUST00000111872.2|Arpp21|ENSMUSG00000032503.11|cyclic AMP-regulated phosphoprotein, 21 	ENSMUST00000164754.2|Arpp21|ENSMUSG00000032503.11|cyclic AMP-regulated phosphoprotein, 21
mm10_v2_chr17_+_70522149_70522169	1.24839	Foxa3	ENSMUST00000140728.1|Dlgap1|ENSMUSG00000003279.10|discs, large (Drosophila) homolog-associated protein 1
mm10_v2_chr3_-_144202300_144202345	1.23046	Foxa3	ENSMUST00000121796.1|Lmo4|ENSMUSG00000028266.11|LIM domain only 4 	ENSMUST00000121112.1|Lmo4|ENSMUSG00000028266.11|LIM domain only 4
mm10_v2_chr8_+_69300776_69300776	1.20788	Foxa3	ENSMUST00000078257.6|D130040H23Rik|ENSMUSG00000079038.2|RIKEN cDNA D130040H23 gene
mm10_v2_chr6_+_8520008_8520058	1.20426	Foxa3	ENSMUST00000162567.1|Glcci1|ENSMUSG00000029638.11|glucocorticoid induced transcript 1 	ENSMUST00000161217.1|Glcci1|ENSMUSG00000029638.11|glucocorticoid induced transcript 1
mm10_v2_chr19_-_37207293_37207508	1.18896	Foxa3	ENSMUST00000132580.1|Cpeb3|ENSMUSG00000039652.10|cytoplasmic polyadenylation element binding protein 3 	ENSMUST00000079754.4|Cpeb3|ENSMUSG00000039652.10|cytoplasmic polyadenylation element binding protein 3 	ENSMUST00000136286.1|Cpeb3|ENSMUSG00000039652.10|cytoplasmic polyadenylation element binding protein 3 	ENSMUST00000126188.1|Cpeb3|ENSMUSG00000039652.10|cytoplasmic polyadenylation element binding protein 3 	ENSMUST00000126781.1|Cpeb3|ENSMUSG00000039652.10|cytoplasmic polyadenylation element binding protein 3
mm10_v2_chr7_-_4844665_4844699	1.18422	Foxa3	ENSMUST00000066041.5|Shisa7|ENSMUSG00000053550.7|shisa homolog 7 (Xenopus laevis) 	ENSMUST00000172377.1|Shisa7|ENSMUSG00000053550.7|shisa homolog 7 (Xenopus laevis)
mm10_v2_chr11_+_69364010_69364041	1.15476	Foxa3	ENSMUST00000166700.1|Gm17305|ENSMUSG00000091095.1|predicted gene, 17305
mm10_v2_chr6_-_137571007_137571032	1.12733	Foxa3	ENSMUST00000100841.2|Eps8|ENSMUSG00000015766.8|epidermal growth factor receptor pathway substrate 8
mm10_v2_chr10_-_57532416_57532487	1.06968	Foxa3	ENSMUST00000169122.1|Serinc1|ENSMUSG00000019877.4|serine incorporator 1
mm10_v2_chr4_+_45965327_45965342	1.00833	Foxa3	ENSMUST00000107777.2|Tdrd7|ENSMUSG00000035517.11|tudor domain containing 7
mm10_v2_chr4_-_87806296_87806325	0.983558	Foxa3	ENSMUST00000126353.1|Mllt3|ENSMUSG00000028496.11|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3 	ENSMUST00000149357.1|Mllt3|ENSMUSG00000028496.11|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3
mm10_v2_chr6_+_8948608_8948619	0.963309	Foxa3	ENSMUST00000160300.1|Nxph1|ENSMUSG00000046178.3|neurexophilin 1
mm10_v2_chr10_-_81230773_81230833	0.930237	Foxa3	ENSMUST00000047408.4|Atcay|ENSMUSG00000034958.5|ataxia, cerebellar, Cayman type homolog (human)
mm10_v2_chr7_+_113766119_113766199	0.926612	Foxa3	ENSMUST00000084696.4|Spon1|ENSMUSG00000038156.9|spondin 1, (f-spondin) extracellular matrix protein
mm10_v2_chr2_+_68117713_68117713	0.922896	Foxa3	ENSMUST00000112346.2|B3galt1|ENSMUSG00000034780.5|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1
mm10_v2_chr12_-_84450944_84451018	0.889774	Foxa3	ENSMUST00000085192.5|Aldh6a1|ENSMUSG00000021238.10|aldehyde dehydrogenase family 6, subfamily A1
mm10_v2_chr3_-_89764581_89764646	0.883071	Foxa3	ENSMUST00000029562.3|Chrnb2|ENSMUSG00000027950.3|cholinergic receptor, nicotinic, beta polypeptide 2 (neuronal)
mm10_v2_chr2_-_77519565_77519647	0.841418	Foxa3	ENSMUST00000111830.2|Zfp385b|ENSMUSG00000027016.11|zinc finger protein 385B
mm10_v2_chr1_+_51289106_51289142	0.807434	Foxa3	ENSMUST00000051572.6|Sdpr|ENSMUSG00000045954.6|serum deprivation response
mm10_v2_chr19_-_5683343_5683343	0.801674	Foxa3	ENSMUST00000127876.1|Pcnxl3|ENSMUSG00000054874.6|pecanex-like 3 (Drosophila)
mm10_v2_chr11_-_42000284_42000356	0.798613	Foxa3	ENSMUST00000109292.2|Gabrg2|ENSMUSG00000020436.11|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2 	ENSMUST00000109290.1|Gabrg2|ENSMUSG00000020436.11|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2
mm10_v2_chr11_-_42000834_42000867	0.772686	Foxa3	ENSMUST00000070725.4|Gabrg2|ENSMUSG00000020436.11|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2
mm10_v2_chr10_-_41303171_41303250	0.761567	Foxa3	ENSMUST00000043814.3|Fig4|ENSMUSG00000038417.3|FIG4 homolog (S. cerevisiae)
mm10_v2_chr2_-_90479165_90479178	0.753779	Foxa3	ENSMUST00000111495.2|Ptprj|ENSMUSG00000025314.10|protein tyrosine phosphatase, receptor type, J
mm10_v2_chr9_+_32116040_32116136	0.751631	Foxa3	ENSMUST00000174641.1|Arhgap32|ENSMUSG00000041444.8|Rho GTPase activating protein 32
mm10_v2_chr1_-_64121389_64121452	0.722205	Foxa3	ENSMUST00000055001.3|Klf7|ENSMUSG00000025959.7|Kruppel-like factor 7 (ubiquitous)
mm10_v2_chr11_-_69805617_69805673	0.707158	Foxa3	ENSMUST00000051025.4|Tmem102|ENSMUSG00000089876.3|transmembrane protein 102
mm10_v2_chr9_+_109931458_109931488	0.70715	Foxa3	ENSMUST00000072772.5|Map4|ENSMUSG00000032479.9|microtubule-associated protein 4 	ENSMUST00000035055.8|Map4|ENSMUSG00000032479.9|microtubule-associated protein 4
mm10_v2_chr18_+_37742088_37742137	0.701269	Foxa3	ENSMUST00000003599.6|Pcdhga9|ENSMUSG00000023036.8|protocadherin gamma subfamily A, 9
mm10_v2_chr3_-_146781351_146781431	0.700646	Foxa3	ENSMUST00000005164.7|Prkacb|ENSMUSG00000005034.9|protein kinase, cAMP dependent, catalytic, beta
mm10_v2_chr4_-_87806276_87806294	0.695225	Foxa3	ENSMUST00000148059.1|Mllt3|ENSMUSG00000028496.11|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3
mm10_v2_chr11_-_42000532_42000592	0.694903	Foxa3	ENSMUST00000070735.3|Gabrg2|ENSMUSG00000020436.11|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2
mm10_v2_chr13_+_94173992_94174027	0.669921	Foxa3	ENSMUST00000121618.1|Lhfpl2|ENSMUSG00000045312.5|lipoma HMGIC fusion partner-like 2
mm10_v2_chr17_+_45433823_45433868	0.665658	Foxa3	ENSMUST00000181149.1|B230354K17Rik|ENSMUSG00000097119.1|RIKEN cDNA B230354K17 gene
mm10_v2_chr5_-_124187150_124187225	0.643252	Foxa3	ENSMUST00000161938.1|Pitpnm2|ENSMUSG00000029406.9|phosphatidylinositol transfer protein, membrane-associated 2
mm10_v2_chr5_+_88583527_88583590	0.636548	Foxa3	ENSMUST00000031229.6|Rufy3|ENSMUSG00000029291.7|RUN and FYVE domain containing 3
mm10_v2_chr9_+_32224457_32224592	0.631103	Foxa3	ENSMUST00000183121.1|Arhgap32|ENSMUSG00000041444.8|Rho GTPase activating protein 32
mm10_v2_chr13_+_5861489_5861501	0.626112	Foxa3	ENSMUST00000000080.6|Klf6|ENSMUSG00000000078.6|Kruppel-like factor 6
mm10_v2_chr18_+_23752333_23752401	0.619032	Foxa3	ENSMUST00000170802.1|Mapre2|ENSMUSG00000024277.8|microtubule-associated protein, RP/EB family, member 2 	ENSMUST00000155708.1|Mapre2|ENSMUSG00000024277.8|microtubule-associated protein, RP/EB family, member 2 	ENSMUST00000118826.2|Mapre2|ENSMUSG00000024277.8|microtubule-associated protein, RP/EB family, member 2
mm10_v2_chr15_+_3270767_3271006	0.593143	Foxa3	ENSMUST00000082424.4|Sepp1|ENSMUSG00000064373.5|selenoprotein P, plasma, 1 	ENSMUST00000159158.1|Sepp1|ENSMUSG00000064373.5|selenoprotein P, plasma, 1 	ENSMUST00000159216.1|Sepp1|ENSMUSG00000064373.5|selenoprotein P, plasma, 1 	ENSMUST00000160311.1|Sepp1|ENSMUSG00000064373.5|selenoprotein P, plasma, 1
mm10_v2_chr9_-_103222063_103222149	0.591994	Foxa3	ENSMUST00000170904.1|Trf|ENSMUSG00000032554.9|transferrin
mm10_v2_chr8_+_93810832_93810843	0.589376	Foxa3	ENSMUST00000034198.8|Gnao1|ENSMUSG00000031748.9|guanine nucleotide binding protein, alpha O 	ENSMUST00000125716.1|Gnao1|ENSMUSG00000031748.9|guanine nucleotide binding protein, alpha O
mm10_v2_chr9_+_32224246_32224264	0.583926	Foxa3	ENSMUST00000168954.2|Arhgap32|ENSMUSG00000041444.8|Rho GTPase activating protein 32
mm10_v2_chr5_-_148995147_148995173	0.562342	Foxa3	ENSMUST00000147473.1|Katnal1|ENSMUSG00000041298.9|katanin p60 subunit A-like 1
mm10_v2_chr15_-_54919961_54920037	0.558462	Foxa3	ENSMUST00000167541.2|Enpp2|ENSMUSG00000022425.9|ectonucleotide pyrophosphatase/phosphodiesterase 2 	ENSMUST00000041591.9|Enpp2|ENSMUSG00000022425.9|ectonucleotide pyrophosphatase/phosphodiesterase 2 	ENSMUST00000173516.1|Enpp2|ENSMUSG00000022425.9|ectonucleotide pyrophosphatase/phosphodiesterase 2
mm10_v2_chr10_+_21992216_21992234	0.55619	Foxa3	ENSMUST00000150089.1|Sgk1|ENSMUSG00000019970.9|serum/glucocorticoid regulated kinase 1 	ENSMUST00000100036.3|Sgk1|ENSMUSG00000019970.9|serum/glucocorticoid regulated kinase 1
mm10_v2_chr10_-_57532489_57532530	0.54296	Foxa3	ENSMUST00000020027.4|Serinc1|ENSMUSG00000019877.4|serine incorporator 1
mm10_v2_chr1_+_15712303_15712303	0.530207	Foxa3	ENSMUST00000170146.1|Kcnb2|ENSMUSG00000090498.1|potassium voltage gated channel, Shab-related subfamily, member 2
mm10_v2_chr11_+_77765588_77765643	0.526135	Foxa3	ENSMUST00000164315.1|Myo18a|ENSMUSG00000000631.13|myosin XVIIIA
mm10_v2_chr15_-_99820072_99820154	0.523666	Foxa3	ENSMUST00000109024.2|Lima1|ENSMUSG00000023022.7|LIM domain and actin binding 1
mm10_v2_chr1_-_64121456_64121491	0.500377	Foxa3	ENSMUST00000142009.1|Klf7|ENSMUSG00000025959.7|Kruppel-like factor 7 (ubiquitous) 	ENSMUST00000114086.1|Klf7|ENSMUSG00000025959.7|Kruppel-like factor 7 (ubiquitous)
mm10_v2_chr12_-_87200200_87200284	0.496456	Foxa3	ENSMUST00000037418.5|Tmed8|ENSMUSG00000034111.5|transmembrane emp24 domain containing 8
mm10_v2_chr6_-_86765807_86765834	0.481967	Foxa3	ENSMUST00000123732.1|Anxa4|ENSMUSG00000029994.11|annexin A4
mm10_v2_chr7_+_92819892_92819920	0.472573	Foxa3	ENSMUST00000107180.1|Rab30|ENSMUSG00000030643.7|RAB30, member RAS oncogene family 	ENSMUST00000107179.1|Rab30|ENSMUSG00000030643.7|RAB30, member RAS oncogene family
mm10_v2_chr9_-_101198999_101199080	0.436002	Foxa3	ENSMUST00000066773.7|Ppp2r3a|ENSMUSG00000043154.9|protein phosphatase 2, regulatory subunit B'', alpha
mm10_v2_chrX_+_142227923_142227951	0.432209	Foxa3	ENSMUST00000042329.5|Nxt2|ENSMUSG00000042271.7|nuclear transport factor 2-like export factor 2
mm10_v2_chr12_+_84451485_84451518	0.430854	Foxa3	ENSMUST00000137170.1|Lin52|ENSMUSG00000085793.1|lin-52 homolog (C. elegans)
mm10_v2_chr12_+_31265279_31265322	0.429153	Foxa3	ENSMUST00000002979.8|Lamb1|ENSMUSG00000002900.9|laminin B1 	ENSMUST00000170495.1|Lamb1|ENSMUSG00000002900.9|laminin B1
mm10_v2_chr13_+_23738804_23738809	0.420275	Foxa3	ENSMUST00000040914.1|Hist1h1c|ENSMUSG00000036181.1|histone cluster 1, H1c
mm10_v2_chr14_-_5455467_5455467	0.420116	Foxa3	ENSMUST00000180867.1|Gm3194|ENSMUSG00000094825.2|predicted gene 3194
mm10_v2_chr1_+_43445736_43445830	0.416429	Foxa3	ENSMUST00000086421.5|Nck2|ENSMUSG00000066877.5|non-catalytic region of tyrosine kinase adaptor protein 2 	ENSMUST00000114744.1|Nck2|ENSMUSG00000066877.5|non-catalytic region of tyrosine kinase adaptor protein 2
mm10_v2_chr13_+_40859768_40859822	0.413953	Foxa3	ENSMUST00000110191.2|Gcnt2|ENSMUSG00000021360.9|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme
mm10_v2_chr9_+_70679016_70679116	0.410376	Foxa3	ENSMUST00000144537.1|Adam10|ENSMUSG00000054693.8|a disintegrin and metallopeptidase domain 10
mm10_v2_chr1_-_132367879_132367894	0.401786	Foxa3	ENSMUST00000142609.1|Tmcc2|ENSMUSG00000042066.9|transmembrane and coiled-coil domains 2
mm10_v2_chr3_+_136670076_136670186	0.38867	Foxa3	ENSMUST00000070198.7|Ppp3ca|ENSMUSG00000028161.11|protein phosphatase 3, catalytic subunit, alpha isoform
mm10_v2_chr4_+_126262325_126262380	0.387994	Foxa3	ENSMUST00000030660.8|Trappc3|ENSMUSG00000028847.8|trafficking protein particle complex 3
mm10_v2_chr6_-_86765866_86765921	0.383048	Foxa3	ENSMUST00000113675.1|Anxa4|ENSMUSG00000029994.11|annexin A4
mm10_v2_chr14_-_24486994_24487064	0.377489	Foxa3	ENSMUST00000026322.7|Polr3a|ENSMUSG00000025280.7|polymerase (RNA) III (DNA directed) polypeptide A
mm10_v2_chr1_+_171329015_171329145	0.356977	Foxa3	ENSMUST00000111300.1|Dedd|ENSMUSG00000013973.6|death effector domain-containing
mm10_v2_chr16_-_4880284_4880315	0.346128	Foxa3	ENSMUST00000037843.6|Ubald1|ENSMUSG00000039568.6|UBA-like domain containing 1
mm10_v2_chr11_-_54860564_54860608	0.338422	Foxa3	ENSMUST00000144164.1|Lyrm7|ENSMUSG00000020268.7|LYR motif containing 7
mm10_v2_chr3_+_33799791_33799955	0.336622	Foxa3	ENSMUST00000099153.3|Ttc14|ENSMUSG00000027677.11|tetratricopeptide repeat domain 14
mm10_v2_chr6_-_99028251_99028313	0.322002	Foxa3	ENSMUST00000177437.1|Foxp1|ENSMUSG00000030067.11|forkhead box P1 	ENSMUST00000177229.1|Foxp1|ENSMUSG00000030067.11|forkhead box P1 	ENSMUST00000113321.1|Foxp1|ENSMUSG00000030067.11|forkhead box P1 	ENSMUST00000124058.1|Foxp1|ENSMUSG00000030067.11|forkhead box P1
mm10_v2_chr8_+_58912257_58912257	0.319681	Foxa3	ENSMUST00000160055.1|BC030500|ENSMUSG00000049946.7|cDNA sequence BC030500
mm10_v2_chr11_-_116024489_116024511	0.311449	Foxa3	ENSMUST00000016703.7|H3f3b|ENSMUSG00000016559.8|H3 histone, family 3B
mm10_v2_chr16_+_41532851_41532865	0.306093	Foxa3	ENSMUST00000078873.4|Lsamp|ENSMUSG00000061080.5|limbic system-associated membrane protein
mm10_v2_chr8_-_125492710_125492710	0.305128	Foxa3	ENSMUST00000108775.1|Sipa1l2|ENSMUSG00000001995.8|signal-induced proliferation-associated 1 like 2
mm10_v2_chr4_+_150853919_150854050	0.303107	Foxa3	ENSMUST00000073600.2|Errfi1|ENSMUSG00000028967.4|ERBB receptor feedback inhibitor 1
mm10_v2_chr11_+_98446826_98446869	0.300043	Foxa3	ENSMUST00000019456.4|Grb7|ENSMUSG00000019312.4|growth factor receptor bound protein 7
mm10_v2_chr1_+_75142775_75142797	0.295937	Foxa3	ENSMUST00000097694.4|Fam134a|ENSMUSG00000049339.10|family with sequence similarity 134, member A
mm10_v2_chr13_+_96388294_96388338	0.286767	Foxa3	ENSMUST00000099295.4|Poc5|ENSMUSG00000021671.8|POC5 centriolar protein homolog (Chlamydomonas)
mm10_v2_chr12_+_31265234_31265267	0.255732	Foxa3	ENSMUST00000169088.1|Lamb1|ENSMUSG00000002900.9|laminin B1
mm10_v2_chr4_+_114680769_114680804	0.255427	Foxa3	ENSMUST00000146346.1|Gm12829|ENSMUSG00000085870.1|predicted gene 12829
mm10_v2_chrX_+_142228177_142228250	0.255209	Foxa3	ENSMUST00000112914.1|Nxt2|ENSMUSG00000042271.7|nuclear transport factor 2-like export factor 2
mm10_v2_chr1_-_180245757_180245911	0.2469	Foxa3	ENSMUST00000111104.1|Psen2|ENSMUSG00000010609.9|presenilin 2
mm10_v2_chr2_+_91730127_91730225	0.239265	Foxa3	ENSMUST00000099712.3|Ambra1|ENSMUSG00000040506.10|autophagy/beclin 1 regulator 1 	ENSMUST00000111317.2|Ambra1|ENSMUSG00000040506.10|autophagy/beclin 1 regulator 1 	ENSMUST00000111316.2|Ambra1|ENSMUSG00000040506.10|autophagy/beclin 1 regulator 1 	ENSMUST00000045705.7|Ambra1|ENSMUSG00000040506.10|autophagy/beclin 1 regulator 1
mm10_v2_chr11_+_78499087_78499123	0.234191	Foxa3	ENSMUST00000017488.4|Vtn|ENSMUSG00000017344.4|vitronectin
mm10_v2_chr5_+_25247344_25247363	0.233899	Foxa3	ENSMUST00000114950.1|Galnt11|ENSMUSG00000038072.8|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 11
mm10_v2_chr10_-_128744014_128744085	0.224197	Foxa3	ENSMUST00000026414.7|Dgka|ENSMUSG00000025357.7|diacylglycerol kinase, alpha
mm10_v2_chr4_+_127021311_127021339	0.209156	Foxa3	ENSMUST00000030623.7|Sfpq|ENSMUSG00000028820.7|splicing factor proline/glutamine rich (polypyrimidine tract binding protein associated)
mm10_v2_chr11_-_95041335_95041374	0.193796	Foxa3	ENSMUST00000038431.7|Pdk2|ENSMUSG00000038967.7|pyruvate dehydrogenase kinase, isoenzyme 2
mm10_v2_chr1_-_168431695_168431750	0.193355	Foxa3	ENSMUST00000176790.1|Pbx1|ENSMUSG00000052534.9|pre B cell leukemia homeobox 1
mm10_v2_chr1_-_170867761_170867784	0.188189	Foxa3	ENSMUST00000027974.6|Atf6|ENSMUSG00000026663.6|activating transcription factor 6
mm10_v2_chr11_-_69197809_69197843	0.185075	Foxa3	ENSMUST00000094078.3|Alox8|ENSMUSG00000020891.5|arachidonate 8-lipoxygenase 	ENSMUST00000021262.3|Alox8|ENSMUSG00000020891.5|arachidonate 8-lipoxygenase
mm10_v2_chr1_-_132390301_132390373	0.183364	Foxa3	ENSMUST00000132435.1|Tmcc2|ENSMUSG00000042066.9|transmembrane and coiled-coil domains 2
mm10_v2_chr4_+_101717404_101717462	0.16703	Foxa3	ENSMUST00000102777.3|Lepr|ENSMUSG00000057722.11|leptin receptor 	ENSMUST00000106921.2|Lepr|ENSMUSG00000057722.11|leptin receptor 	ENSMUST00000037552.3|Lepr|ENSMUSG00000057722.11|leptin receptor 	ENSMUST00000145024.1|Lepr|ENSMUSG00000057722.11|leptin receptor
mm10_v2_chr8_+_11556061_11556099	0.164703	Foxa3	ENSMUST00000054399.4|Ing1|ENSMUSG00000045969.7|inhibitor of growth family, member 1
mm10_v2_chr2_-_176917518_176917518	0.162482	Foxa3	ENSMUST00000108931.2|Gm14296|ENSMUSG00000074527.5|predicted gene 14296
mm10_v2_chr16_+_33518278_33518340	0.145891	Foxa3	ENSMUST00000122427.1|Slc12a8|ENSMUSG00000035506.10|solute carrier family 12 (potassium/chloride transporters), member 8 	ENSMUST00000059056.8|Slc12a8|ENSMUSG00000035506.10|solute carrier family 12 (potassium/chloride transporters), member 8
mm10_v2_chr14_+_13453937_13453958	0.138258	Foxa3	ENSMUST00000153954.1|Synpr|ENSMUSG00000056296.10|synaptoporin
mm10_v2_chr3_+_121531603_121531634	0.129413	Foxa3	ENSMUST00000180804.1|A530020G20Rik|ENSMUSG00000097124.1|RIKEN cDNA A530020G20 gene
mm10_v2_chr15_-_54920115_54920146	0.128858	Foxa3	ENSMUST00000171545.1|Enpp2|ENSMUSG00000022425.9|ectonucleotide pyrophosphatase/phosphodiesterase 2
mm10_v2_chr4_+_148602527_148602583	0.126559	Foxa3	ENSMUST00000105701.2|Masp2|ENSMUSG00000028979.11|mannan-binding lectin serine peptidase 2 	ENSMUST00000052060.6|Masp2|ENSMUSG00000028979.11|mannan-binding lectin serine peptidase 2
mm10_v2_chr7_-_27181149_27181162	0.119306	Foxa3	ENSMUST00000071986.6|Mia|ENSMUSG00000089661.3|melanoma inhibitory activity 	ENSMUST00000121848.1|Mia|ENSMUSG00000089661.3|melanoma inhibitory activity
mm10_v2_chr8_-_25785154_25785215	0.115121	Foxa3	ENSMUST00000038498.8|Bag4|ENSMUSG00000037316.8|BCL2-associated athanogene 4
mm10_v2_chr2_+_69722797_69722840	0.113344	Foxa3	ENSMUST00000090858.3|Ppig|ENSMUSG00000042133.10|peptidyl-prolyl isomerase G (cyclophilin G)
mm10_v2_chr3_+_76075583_76075583	0.105449	Foxa3	ENSMUST00000160261.1|Fstl5|ENSMUSG00000034098.8|follistatin-like 5
mm10_v2_chr2_-_175131864_175131864	0.102745	Foxa3	ENSMUST00000108929.2|Gm14399|ENSMUSG00000090093.2|predicted gene 14399
mm10_v2_chrX_-_75578188_75578247	0.0990173	Foxa3	ENSMUST00000033545.5|Rab39b|ENSMUSG00000031202.5|RAB39B, member RAS oncogene family
mm10_v2_chrX_+_71663665_71663671	0.0915803	Foxa3	ENSMUST00000070449.5|Gpr50|ENSMUSG00000056380.7|G-protein-coupled receptor 50
mm10_v2_chr2_+_138278481_138278531	0.0914302	Foxa3	ENSMUST00000075410.4|Btbd3|ENSMUSG00000062098.5|BTB (POZ) domain containing 3
mm10_v2_chr9_-_44802951_44802961	0.0820752	Foxa3	ENSMUST00000044694.6|Ttc36|ENSMUSG00000039438.6|tetratricopeptide repeat domain 36
mm10_v2_chr12_+_55089202_55089202	0.0717651	Foxa3	ENSMUST00000021407.10|Srp54a|ENSMUSG00000073079.5|signal recognition particle 54A
mm10_v2_chr17_-_45433682_45433709	0.0648545	Foxa3	ENSMUST00000024727.8|Cdc5l|ENSMUSG00000023932.8|cell division cycle 5-like (S. pombe)
mm10_v2_chr7_-_133123770_133123876	0.0423653	Foxa3	ENSMUST00000164896.1|Ctbp2|ENSMUSG00000030970.10|C-terminal binding protein 2 	ENSMUST00000171968.1|Ctbp2|ENSMUSG00000030970.10|C-terminal binding protein 2
mm10_v2_chr12_-_31950210_31950246	0.0410716	Foxa3	ENSMUST00000176084.1|Hbp1|ENSMUSG00000002996.11|high mobility group box transcription factor 1 	ENSMUST00000176103.1|Hbp1|ENSMUSG00000002996.11|high mobility group box transcription factor 1 	ENSMUST00000167458.2|Hbp1|ENSMUSG00000002996.11|high mobility group box transcription factor 1
mm10_v2_chr2_+_80617045_80617290	0.0353856	Foxa3	ENSMUST00000028384.4|Dusp19|ENSMUSG00000027001.4|dual specificity phosphatase 19
mm10_v2_chr17_+_34969912_34969912	0.0317402	Foxa3	ENSMUST00000173680.1|Gm20481|ENSMUSG00000092609.1|predicted gene 20481
mm10_v2_chr6_-_99044414_99044459	0.0312938	Foxa3	ENSMUST00000177507.1|Foxp1|ENSMUSG00000030067.11|forkhead box P1 	ENSMUST00000123992.1|Foxp1|ENSMUSG00000030067.11|forkhead box P1
mm10_v2_chr3_-_87263518_87263599	0.0274852	Foxa3	ENSMUST00000090986.4|Fcrls|ENSMUSG00000015852.7|Fc receptor-like S, scavenger receptor
mm10_v2_chr4_+_137993016_137993036	0.0196949	Foxa3	ENSMUST00000105830.2|Eif4g3|ENSMUSG00000028760.10|eukaryotic translation initiation factor 4 gamma, 3 	ENSMUST00000084215.5|Eif4g3|ENSMUSG00000028760.10|eukaryotic translation initiation factor 4 gamma, 3 	ENSMUST00000058133.3|Eif4g3|ENSMUSG00000028760.10|eukaryotic translation initiation factor 4 gamma, 3 	ENSMUST00000139759.1|Eif4g3|ENSMUSG00000028760.10|eukaryotic translation initiation factor 4 gamma, 3
mm10_v2_chr7_+_130692532_130692575	0.0141832	Foxa3	ENSMUST00000033141.6|Tacc2|ENSMUSG00000030852.9|transforming, acidic coiled-coil containing protein 2
mm10_v2_chr2_-_71055534_71055611	0.0104506	Foxa3	ENSMUST00000090849.5|Mettl8|ENSMUSG00000041975.11|methyltransferase like 8 	ENSMUST00000100037.2|Mettl8|ENSMUSG00000041975.11|methyltransferase like 8 	ENSMUST00000112186.2|Mettl8|ENSMUSG00000041975.11|methyltransferase like 8
mm10_v2_chr2_+_69723071_69723093	0.00754906	Foxa3	ENSMUST00000040915.8|Ppig|ENSMUSG00000042133.10|peptidyl-prolyl isomerase G (cyclophilin G)
mm10_v2_chr11_-_69672307_69672332	0.00646471	Foxa3	ENSMUST00000163666.2|Eif4a1|ENSMUSG00000059796.10|eukaryotic translation initiation factor 4A1
mm10_v2_chr8_-_46124146_46124146	0.00464369	Foxa3	ENSMUST00000170416.1|Snx25|ENSMUSG00000038291.10|sorting nexin 25
mm10_v2_chr1_-_75142360_75142424	0.0043037	Foxa3	ENSMUST00000041213.5|Cnppd1|ENSMUSG00000033159.8|cyclin Pas1/PHO80 domain containing 1
mm10_v2_chrX_+_159303266_159303281	0.00176436	Foxa3	ENSMUST00000112491.1|Rps6ka3|ENSMUSG00000031309.9|ribosomal protein S6 kinase polypeptide 3
