mm10_v2_chr6_-_72789240_72789262	2.24385	Gli2	ENSMUST00000069536.5|Tcf7l1|ENSMUSG00000055799.7|transcription factor 7 like 1 (T cell specific, HMG box)
mm10_v2_chr6_-_72788952_72789061	2.19312	Gli2	ENSMUST00000114053.2|Tcf7l1|ENSMUSG00000055799.7|transcription factor 7 like 1 (T cell specific, HMG box)
mm10_v2_chr6_-_23248264_23248390	1.63399	Gli2	ENSMUST00000031709.5|Fezf1|ENSMUSG00000029697.5|Fez family zinc finger 1
mm10_v2_chr5_-_24527276_24527276	1.32234	Gli2	ENSMUST00000088311.4|Gbx1|ENSMUSG00000067724.4|gastrulation brain homeobox 1
mm10_v2_chr7_-_4752972_4753094	1.2369	Gli2	ENSMUST00000183971.1|Cox6b2|ENSMUSG00000051811.8|cytochrome c oxidase subunit VIb polypeptide 2 	ENSMUST00000182173.1|Cox6b2|ENSMUSG00000051811.8|cytochrome c oxidase subunit VIb polypeptide 2 	ENSMUST00000182738.1|Cox6b2|ENSMUSG00000051811.8|cytochrome c oxidase subunit VIb polypeptide 2 	ENSMUST00000184143.1|Cox6b2|ENSMUSG00000051811.8|cytochrome c oxidase subunit VIb polypeptide 2 	ENSMUST00000182111.1|Cox6b2|ENSMUSG00000051811.8|cytochrome c oxidase subunit VIb polypeptide 2 	ENSMUST00000182048.1|Cox6b2|ENSMUSG00000051811.8|cytochrome c oxidase subunit VIb polypeptide 2 	ENSMUST00000063324.7|Cox6b2|ENSMUSG00000051811.8|cytochrome c oxidase subunit VIb polypeptide 2
mm10_v2_chr7_-_137314394_137314445	0.982895	Gli2	ENSMUST00000168203.1|Ebf3|ENSMUSG00000010476.7|early B cell factor 3 	ENSMUST00000106118.2|Ebf3|ENSMUSG00000010476.7|early B cell factor 3 	ENSMUST00000169486.2|Ebf3|ENSMUSG00000010476.7|early B cell factor 3 	ENSMUST00000033378.5|Ebf3|ENSMUSG00000010476.7|early B cell factor 3
mm10_v2_chr9_-_43239816_43239842	0.968986	Gli2	ENSMUST00000034512.5|Oaf|ENSMUSG00000032014.5|OAF homolog (Drosophila)
mm10_v2_chrX_-_141725181_141725263	0.947927	Gli2	ENSMUST00000067841.7|Irs4|ENSMUSG00000054667.7|insulin receptor substrate 4
mm10_v2_chr8_+_127064022_127064086	0.94208	Gli2	ENSMUST00000160272.1|Pard3|ENSMUSG00000025812.11|par-3 (partitioning defective 3) homolog (C. elegans) 	ENSMUST00000079777.5|Pard3|ENSMUSG00000025812.11|par-3 (partitioning defective 3) homolog (C. elegans) 	ENSMUST00000162907.1|Pard3|ENSMUSG00000025812.11|par-3 (partitioning defective 3) homolog (C. elegans)
mm10_v2_chr3_-_135608221_135608290	0.928339	Gli2	ENSMUST00000132668.1|Nfkb1|ENSMUSG00000028163.11|nuclear factor of kappa light polypeptide gene enhancer in B cells 1, p105
mm10_v2_chr7_-_144738520_144738597	0.914136	Gli2	ENSMUST00000118556.2|Ano1|ENSMUSG00000031075.11|anoctamin 1, calcium activated chloride channel 	ENSMUST00000033393.8|Ano1|ENSMUSG00000031075.11|anoctamin 1, calcium activated chloride channel
mm10_v2_chr4_+_124700700_124700728	0.873609	Gli2	ENSMUST00000106199.3|Fhl3|ENSMUSG00000032643.6|four and a half LIM domains 3 	ENSMUST00000038684.5|Fhl3|ENSMUSG00000032643.6|four and a half LIM domains 3
mm10_v2_chr8_+_127063893_127063916	0.84027	Gli2	ENSMUST00000162309.1|Pard3|ENSMUSG00000025812.11|par-3 (partitioning defective 3) homolog (C. elegans)
mm10_v2_chr7_-_116308241_116308376	0.83392	Gli2	ENSMUST00000183057.1|Plekha7|ENSMUSG00000045659.11|pleckstrin homology domain containing, family A member 7 	ENSMUST00000182487.1|Plekha7|ENSMUSG00000045659.11|pleckstrin homology domain containing, family A member 7 	ENSMUST00000181998.1|Plekha7|ENSMUSG00000045659.11|pleckstrin homology domain containing, family A member 7
mm10_v2_chr7_-_144738478_144738508	0.773683	Gli2	ENSMUST00000121758.1|Ano1|ENSMUSG00000031075.11|anoctamin 1, calcium activated chloride channel
mm10_v2_chr13_+_35741313_35741385	0.681966	Gli2	ENSMUST00000163595.2|Cdyl|ENSMUSG00000059288.7|chromodomain protein, Y chromosome-like
mm10_v2_chr8_+_127064107_127064347	0.638387	Gli2	ENSMUST00000162536.1|Pard3|ENSMUSG00000025812.11|par-3 (partitioning defective 3) homolog (C. elegans) 	ENSMUST00000026921.6|Pard3|ENSMUSG00000025812.11|par-3 (partitioning defective 3) homolog (C. elegans) 	ENSMUST00000162665.1|Pard3|ENSMUSG00000025812.11|par-3 (partitioning defective 3) homolog (C. elegans) 	ENSMUST00000160766.1|Pard3|ENSMUSG00000025812.11|par-3 (partitioning defective 3) homolog (C. elegans) 	ENSMUST00000162602.1|Pard3|ENSMUSG00000025812.11|par-3 (partitioning defective 3) homolog (C. elegans) 	ENSMUST00000162531.1|Pard3|ENSMUSG00000025812.11|par-3 (partitioning defective 3) homolog (C. elegans) 	ENSMUST00000160581.1|Pard3|ENSMUSG00000025812.11|par-3 (partitioning defective 3) homolog (C. elegans) 	ENSMUST00000161355.1|Pard3|ENSMUSG00000025812.11|par-3 (partitioning defective 3) homolog (C. elegans) 	ENSMUST00000159537.1|Pard3|ENSMUSG00000025812.11|par-3 (partitioning defective 3) homolog (C. elegans)
mm10_v2_chr9_+_62342449_62342473	0.615137	Gli2	ENSMUST00000156461.1|Anp32a|ENSMUSG00000032249.8|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A
mm10_v2_chr4_+_121039385_121039385	0.606353	Gli2	ENSMUST00000030372.5|Col9a2|ENSMUSG00000028626.5|collagen, type IX, alpha 2
mm10_v2_chr6_+_120666388_120666424	0.520095	Gli2	ENSMUST00000112686.1|Cecr2|ENSMUSG00000071226.5|cat eye syndrome chromosome region, candidate 2
mm10_v2_chr3_+_127633134_127633140	0.513941	Gli2	ENSMUST00000029587.7|Neurog2|ENSMUSG00000027967.7|neurogenin 2
mm10_v2_chrX_-_9662950_9663003	0.511388	Gli2	ENSMUST00000033519.2|Dynlt3|ENSMUSG00000031176.2|dynein light chain Tctex-type 3
mm10_v2_chr4_+_63215402_63215435	0.504679	Gli2	ENSMUST00000036300.6|Col27a1|ENSMUSG00000045672.9|collagen, type XXVII, alpha 1
mm10_v2_chr16_-_17132377_17132388	0.502093	Gli2	ENSMUST00000023453.7|Sdf2l1|ENSMUSG00000022769.7|stromal cell-derived factor 2-like 1
mm10_v2_chr5_+_117319258_117319284	0.500911	Gli2	ENSMUST00000111967.1|Vsig10|ENSMUSG00000066894.8|V-set and immunoglobulin domain containing 10
mm10_v2_chr4_-_83486453_83486478	0.477764	Gli2	ENSMUST00000107214.2|Psip1|ENSMUSG00000028484.10|PC4 and SFRS1 interacting protein 1 	ENSMUST00000107215.2|Psip1|ENSMUSG00000028484.10|PC4 and SFRS1 interacting protein 1 	ENSMUST00000030207.8|Psip1|ENSMUSG00000028484.10|PC4 and SFRS1 interacting protein 1
mm10_v2_chr19_+_6975048_6975071	0.456427	Gli2	ENSMUST00000070850.6|Ppp1r14b|ENSMUSG00000056612.6|protein phosphatase 1, regulatory (inhibitor) subunit 14B
mm10_v2_chrX_+_137049586_137049654	0.437897	Gli2	ENSMUST00000047852.7|Fam199x|ENSMUSG00000042595.7|family with sequence similarity 199, X-linked
mm10_v2_chr5_+_117319292_117319326	0.426546	Gli2	ENSMUST00000086464.4|Vsig10|ENSMUSG00000066894.8|V-set and immunoglobulin domain containing 10
mm10_v2_chr14_+_64950037_64950056	0.418885	Gli2	ENSMUST00000043914.5|Ints9|ENSMUSG00000021975.7|integrator complex subunit 9
mm10_v2_chr7_-_133123312_133123377	0.40756	Gli2	ENSMUST00000171022.1|Ctbp2|ENSMUSG00000030970.10|C-terminal binding protein 2 	ENSMUST00000163601.1|Ctbp2|ENSMUSG00000030970.10|C-terminal binding protein 2 	ENSMUST00000165534.1|Ctbp2|ENSMUSG00000030970.10|C-terminal binding protein 2 	ENSMUST00000124096.1|Fgfr2|ENSMUSG00000030849.11|fibroblast growth factor receptor 2 	ENSMUST00000033269.8|Ctbp2|ENSMUSG00000030970.10|C-terminal binding protein 2
mm10_v2_chr2_+_164486455_164486655	0.40551	Gli2	ENSMUST00000069385.8|Dbndd2|ENSMUSG00000017734.9|dysbindin (dystrobrevin binding protein 1) domain containing 2 	ENSMUST00000143690.1|Dbndd2|ENSMUSG00000017734.9|dysbindin (dystrobrevin binding protein 1) domain containing 2
mm10_v2_chr17_+_47594629_47594756	0.388318	Gli2	ENSMUST00000182846.1|Ccnd3|ENSMUSG00000034165.10|cyclin D3
mm10_v2_chr17_-_31658729_31658766	0.385669	Gli2	ENSMUST00000166526.1|U2af1|ENSMUSG00000061613.6|U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 1 	ENSMUST00000014684.4|U2af1|ENSMUSG00000061613.6|U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 1
mm10_v2_chrX_-_167382747_167382760	0.376544	Gli2	ENSMUST00000026839.4|Prps2|ENSMUSG00000025742.5|phosphoribosyl pyrophosphate synthetase 2
mm10_v2_chr4_-_83486178_83486276	0.364078	Gli2	ENSMUST00000130626.1|Psip1|ENSMUSG00000028484.10|PC4 and SFRS1 interacting protein 1
mm10_v2_chr7_-_133123160_133123185	0.363408	Gli2	ENSMUST00000166439.1|Ctbp2|ENSMUSG00000030970.10|C-terminal binding protein 2
mm10_v2_chr19_+_6047081_6047104	0.36313	Gli2	ENSMUST00000025723.8|Syvn1|ENSMUSG00000024807.11|synovial apoptosis inhibitor 1, synoviolin
mm10_v2_chr19_+_6047055_6047080	0.360636	Gli2	ENSMUST00000134667.1|Syvn1|ENSMUSG00000024807.11|synovial apoptosis inhibitor 1, synoviolin
mm10_v2_chr4_+_32800246_32800289	0.354142	Gli2	ENSMUST00000062802.4|Lyrm2|ENSMUSG00000045854.4|LYR motif containing 2
mm10_v2_chr15_+_95790831_95790859	0.332718	Gli2	ENSMUST00000071874.6|Ano6|ENSMUSG00000064210.6|anoctamin 6
mm10_v2_chr3_+_36552600_36552677	0.328821	Gli2	ENSMUST00000029269.5|Exosc9|ENSMUSG00000027714.5|exosome component 9 	ENSMUST00000136890.1|Exosc9|ENSMUSG00000027714.5|exosome component 9
mm10_v2_chr15_-_56694525_56694554	0.324712	Gli2	ENSMUST00000050544.7|Has2|ENSMUSG00000022367.7|hyaluronan synthase 2
mm10_v2_chr8_-_67515606_67515606	0.320419	Gli2	ENSMUST00000032981.5|Gm9755|ENSMUSG00000030735.5|predicted pseudogene 9755
mm10_v2_chr6_+_43265582_43265681	0.319586	Gli2	ENSMUST00000031750.7|Arhgef5|ENSMUSG00000033542.7|Rho guanine nucleotide exchange factor (GEF) 5
mm10_v2_chr15_-_85581809_85581821	0.317791	Gli2	ENSMUST00000023015.7|Wnt7b|ENSMUSG00000022382.8|wingless-related MMTV integration site 7B
mm10_v2_chrX_+_100730178_100730189	0.306016	Gli2	ENSMUST00000113744.1|Gdpd2|ENSMUSG00000019359.8|glycerophosphodiester phosphodiesterase domain containing 2
mm10_v2_chr5_+_23850590_23850607	0.30035	Gli2	ENSMUST00000181574.1|2700038G22Rik|ENSMUSG00000097180.1|RIKEN cDNA 2700038G22 gene
mm10_v2_chr7_+_35119285_35119301	0.297071	Gli2	ENSMUST00000042985.9|Cebpa|ENSMUSG00000034957.9|CCAAT/enhancer binding protein (C/EBP), alpha
mm10_v2_chr11_-_100620165_100620209	0.294939	Gli2	ENSMUST00000014339.8|Dnajc7|ENSMUSG00000014195.9|DnaJ (Hsp40) homolog, subfamily C, member 7
mm10_v2_chr11_+_101176041_101176041	0.294797	Gli2	ENSMUST00000103109.3|Cntnap1|ENSMUSG00000017167.6|contactin associated protein-like 1
mm10_v2_chrX_+_20617503_20617816	0.293516	Gli2	ENSMUST00000115375.1|Rbm10|ENSMUSG00000031060.10|RNA binding motif protein 10 	ENSMUST00000115374.1|Rbm10|ENSMUSG00000031060.10|RNA binding motif protein 10 	ENSMUST00000084383.3|Rbm10|ENSMUSG00000031060.10|RNA binding motif protein 10
mm10_v2_chr11_+_51619731_51619813	0.292905	Gli2	ENSMUST00000127405.1|Nhp2|ENSMUSG00000001056.3|NHP2 ribonucleoprotein
mm10_v2_chr5_-_115300912_115300944	0.292386	Gli2	ENSMUST00000112090.1|Dynll1|ENSMUSG00000009013.4|dynein light chain LC8-type 1
mm10_v2_chr5_-_115300957_115300999	0.292244	Gli2	ENSMUST00000009157.3|Dynll1|ENSMUSG00000009013.4|dynein light chain LC8-type 1
mm10_v2_chr13_+_55445301_55445374	0.279665	Gli2	ENSMUST00000001115.8|Grk6|ENSMUSG00000074886.4|G protein-coupled receptor kinase 6 	ENSMUST00000099482.3|Grk6|ENSMUSG00000074886.4|G protein-coupled receptor kinase 6
mm10_v2_chr17_+_24632671_24632712	0.2783	Gli2	ENSMUST00000047611.2|Nthl1|ENSMUSG00000041429.2|nth (endonuclease III)-like 1 (E.coli)
mm10_v2_chr4_-_59783800_59783876	0.276937	Gli2	ENSMUST00000107526.1|Inip|ENSMUSG00000038544.8|INTS3 and NABP interacting protein 	ENSMUST00000095063.4|Inip|ENSMUSG00000038544.8|INTS3 and NABP interacting protein
mm10_v2_chr5_-_137786681_137786715	0.264288	Gli2	ENSMUST00000132726.1|Mepce|ENSMUSG00000029726.10|methylphosphate capping enzyme
mm10_v2_chr1_-_175625580_175625635	0.262512	Gli2	ENSMUST00000027810.7|Fh1|ENSMUSG00000026526.8|fumarate hydratase 1
mm10_v2_chr11_+_117308135_117308158	0.260953	Gli2	ENSMUST00000153668.1|Sept9|ENSMUSG00000059248.7|septin 9
mm10_v2_chrX_+_100729917_100729963	0.255417	Gli2	ENSMUST00000019503.7|Gdpd2|ENSMUSG00000019359.8|glycerophosphodiester phosphodiesterase domain containing 2
mm10_v2_chr4_-_135971894_135971929	0.255407	Gli2	ENSMUST00000105852.1|Lypla2|ENSMUSG00000028670.8|lysophospholipase 2
mm10_v2_chr4_-_126256226_126256370	0.253426	Gli2	ENSMUST00000122129.1|Map7d1|ENSMUSG00000028849.11|MAP7 domain containing 1 	ENSMUST00000061143.8|Map7d1|ENSMUSG00000028849.11|MAP7 domain containing 1 	ENSMUST00000106132.2|Map7d1|ENSMUSG00000028849.11|MAP7 domain containing 1
mm10_v2_chr10_-_93589621_93589706	0.251313	Gli2	ENSMUST00000020203.6|Snrpf|ENSMUSG00000020018.6|small nuclear ribonucleoprotein polypeptide F
mm10_v2_chr10_-_99126321_99126321	0.233489	Gli2	ENSMUST00000060761.5|Phxr2|ENSMUSG00000055108.5|per-hexamer repeat gene 2
mm10_v2_chr9_+_55149364_55149395	0.232991	Gli2	ENSMUST00000121677.1|Ube2q2|ENSMUSG00000032307.10|ubiquitin-conjugating enzyme E2Q (putative) 2
mm10_v2_chr5_-_137786651_137786668	0.230056	Gli2	ENSMUST00000031740.9|Mepce|ENSMUSG00000029726.10|methylphosphate capping enzyme
mm10_v2_chr4_-_121098190_121098250	0.222785	Gli2	ENSMUST00000058754.2|Zmpste24|ENSMUSG00000043207.4|zinc metallopeptidase, STE24
mm10_v2_chr2_+_69861562_69861584	0.216291	Gli2	ENSMUST00000090852.4|Ssb|ENSMUSG00000068882.7|Sjogren syndrome antigen B 	ENSMUST00000166411.1|Ssb|ENSMUSG00000068882.7|Sjogren syndrome antigen B
mm10_v2_chr9_+_13662460_13662460	0.209627	Gli2	ENSMUST00000177755.1|Maml2|ENSMUSG00000031925.10|mastermind like 2 (Drosophila)
mm10_v2_chr6_+_67266979_67267021	0.207585	Gli2	ENSMUST00000042990.4|Serbp1|ENSMUSG00000036371.4|serpine1 mRNA binding protein 1
mm10_v2_chr17_-_84187939_84187954	0.20592	Gli2	ENSMUST00000060366.6|Zfp36l2|ENSMUSG00000045817.8|zinc finger protein 36, C3H type-like 2
mm10_v2_chr5_-_117319242_117319242	0.200526	Gli2	ENSMUST00000100834.1|Gm10399|ENSMUSG00000072688.1|predicted gene 10399
mm10_v2_chr17_+_28691342_28691399	0.198796	Gli2	ENSMUST00000114758.1|Mapk14|ENSMUSG00000053436.8|mitogen-activated protein kinase 14 	ENSMUST00000004990.6|Mapk14|ENSMUSG00000053436.8|mitogen-activated protein kinase 14 	ENSMUST00000062694.8|Mapk14|ENSMUSG00000053436.8|mitogen-activated protein kinase 14 	ENSMUST00000114754.1|Mapk14|ENSMUSG00000053436.8|mitogen-activated protein kinase 14
mm10_v2_chr9_-_69760924_69760940	0.197818	Gli2	ENSMUST00000071281.4|Foxb1|ENSMUSG00000059246.4|forkhead box B1
mm10_v2_chr7_-_133122615_133122762	0.194758	Gli2	ENSMUST00000167218.1|Ctbp2|ENSMUSG00000030970.10|C-terminal binding protein 2
mm10_v2_chr1_-_51915968_51916071	0.183699	Gli2	ENSMUST00000046390.7|Myo1b|ENSMUSG00000018417.8|myosin IB
mm10_v2_chr7_-_65371210_65371287	0.182953	Gli2	ENSMUST00000102592.3|Tjp1|ENSMUSG00000030516.8|tight junction protein 1
mm10_v2_chr2_+_69861638_69861686	0.178915	Gli2	ENSMUST00000112260.1|Ssb|ENSMUSG00000068882.7|Sjogren syndrome antigen B
mm10_v2_chr10_+_80151154_80151375	0.178754	Gli2	ENSMUST00000146516.1|Midn|ENSMUSG00000035621.7|midnolin 	ENSMUST00000144526.1|Midn|ENSMUSG00000035621.7|midnolin
mm10_v2_chr18_-_35662180_35662195	0.178033	Gli2	ENSMUST00000025209.4|Spata24|ENSMUSG00000024352.5|spermatogenesis associated 24 	ENSMUST00000096573.2|Spata24|ENSMUSG00000024352.5|spermatogenesis associated 24
mm10_v2_chr13_+_44730726_44730838	0.177804	Gli2	ENSMUST00000173704.1|Jarid2|ENSMUSG00000038518.9|jumonji, AT rich interactive domain 2 	ENSMUST00000044608.7|Jarid2|ENSMUSG00000038518.9|jumonji, AT rich interactive domain 2 	ENSMUST00000173367.1|Jarid2|ENSMUSG00000038518.9|jumonji, AT rich interactive domain 2
mm10_v2_chr10_+_93589413_93589413	0.169108	Gli2	ENSMUST00000181835.1|4933408J17Rik|ENSMUSG00000097407.1|RIKEN cDNA 4933408J17 gene
mm10_v2_chr5_-_53213447_53213473	0.164298	Gli2	ENSMUST00000031090.6|Sel1l3|ENSMUSG00000029189.6|sel-1 suppressor of lin-12-like 3 (C. elegans)
mm10_v2_chr9_+_45055166_45055195	0.158854	Gli2	ENSMUST00000114664.1|Mpzl3|ENSMUSG00000070305.4|myelin protein zero-like 3 	ENSMUST00000093856.3|Mpzl3|ENSMUSG00000070305.4|myelin protein zero-like 3
mm10_v2_chr19_+_6057888_6057914	0.156965	Gli2	ENSMUST00000043074.5|Fau|ENSMUSG00000038274.5|Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed (fox derived) 	ENSMUST00000178310.1|Fau|ENSMUSG00000038274.5|Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed (fox derived)
mm10_v2_chr4_-_126321669_126321704	0.149969	Gli2	ENSMUST00000102617.4|Adprhl2|ENSMUSG00000042558.10|ADP-ribosylhydrolase like 2
mm10_v2_chr7_-_81454751_81454764	0.14853	Gli2	ENSMUST00000098331.3|Cpeb1|ENSMUSG00000025586.10|cytoplasmic polyadenylation element binding protein 1 	ENSMUST00000178892.1|Cpeb1|ENSMUSG00000025586.10|cytoplasmic polyadenylation element binding protein 1
mm10_v2_chr9_+_114401076_114401133	0.14634	Gli2	ENSMUST00000063042.9|Glb1|ENSMUSG00000045594.9|galactosidase, beta 1 	ENSMUST00000111820.2|Tmppe|ENSMUSG00000079260.2|transmembrane protein with metallophosphoesterase domain
mm10_v2_chr10_+_42502030_42502041	0.143339	Gli2	ENSMUST00000105500.1|Snx3|ENSMUSG00000019804.6|sorting nexin 3 	ENSMUST00000019939.5|Snx3|ENSMUSG00000019804.6|sorting nexin 3
mm10_v2_chr7_-_133123409_133123472	0.139055	Gli2	ENSMUST00000170459.1|Ctbp2|ENSMUSG00000030970.10|C-terminal binding protein 2 	ENSMUST00000166400.1|Ctbp2|ENSMUSG00000030970.10|C-terminal binding protein 2
mm10_v2_chr1_-_51915901_51915958	0.13792	Gli2	ENSMUST00000018561.7|Myo1b|ENSMUSG00000018417.8|myosin IB 	ENSMUST00000114537.2|Myo1b|ENSMUSG00000018417.8|myosin IB
mm10_v2_chr16_-_4077778_4077831	0.135693	Gli2	ENSMUST00000006137.8|Trap1|ENSMUSG00000005981.11|TNF receptor-associated protein 1
mm10_v2_chr16_-_88056176_88056176	0.130511	Gli2	ENSMUST00000072256.5|Grik1|ENSMUSG00000022935.8|glutamate receptor, ionotropic, kainate 1 	ENSMUST00000023652.8|Grik1|ENSMUSG00000022935.8|glutamate receptor, ionotropic, kainate 1 	ENSMUST00000114137.1|Grik1|ENSMUSG00000022935.8|glutamate receptor, ionotropic, kainate 1
mm10_v2_chr17_+_28691419_28691445	0.128383	Gli2	ENSMUST00000124886.1|Mapk14|ENSMUSG00000053436.8|mitogen-activated protein kinase 14
mm10_v2_chr4_+_117096049_117096083	0.12735	Gli2	ENSMUST00000030443.5|Ptch2|ENSMUSG00000028681.5|patched homolog 2
mm10_v2_chr2_+_120609383_120609400	0.124281	Gli2	ENSMUST00000124187.1|Haus2|ENSMUSG00000027285.7|HAUS augmin-like complex, subunit 2
mm10_v2_chr1_+_167349976_167350065	0.122484	Gli2	ENSMUST00000028004.9|Aldh9a1|ENSMUSG00000026687.9|aldehyde dehydrogenase 9, subfamily A1
mm10_v2_chr16_+_19760902_19761054	0.119492	Gli2	ENSMUST00000119468.1|B3gnt5|ENSMUSG00000022686.8|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5
mm10_v2_chr4_+_36952930_36952970	0.114714	Gli2	ENSMUST00000144029.1|Gm12371|ENSMUSG00000084898.1|predicted gene 12371
mm10_v2_chr7_-_121035096_121035096	0.112739	Gli2	ENSMUST00000065740.2|Gm9905|ENSMUSG00000053358.2|predicted gene 9905
mm10_v2_chr9_+_109095427_109095453	0.109947	Gli2	ENSMUST00000072093.6|Plxnb1|ENSMUSG00000053646.7|plexin B1
mm10_v2_chr2_-_37703275_37703290	0.108197	Gli2	ENSMUST00000072186.5|Strbp|ENSMUSG00000026915.10|spermatid perinuclear RNA binding protein
mm10_v2_chr17_+_24669730_24669752	0.105203	Gli2	ENSMUST00000047179.5|Zfp598|ENSMUSG00000041130.9|zinc finger protein 598
mm10_v2_chr18_-_38250157_38250212	0.101305	Gli2	ENSMUST00000181871.1|1700086O06Rik|ENSMUSG00000097080.1|RIKEN cDNA 1700086O06 gene
mm10_v2_chr15_+_41447438_41447482	0.0997696	Gli2	ENSMUST00000110297.2|Oxr1|ENSMUSG00000022307.9|oxidation resistance 1 	ENSMUST00000090096.4|Oxr1|ENSMUSG00000022307.9|oxidation resistance 1
mm10_v2_chr5_-_134456227_134456263	0.0996382	Gli2	ENSMUST00000111244.1|Gtf2ird1|ENSMUSG00000023079.8|general transcription factor II I repeat domain-containing 1
mm10_v2_chr4_+_155831272_155831351	0.0995445	Gli2	ENSMUST00000139651.1|Aurkaip1|ENSMUSG00000065990.6|aurora kinase A interacting protein 1 	ENSMUST00000084097.5|Aurkaip1|ENSMUSG00000065990.6|aurora kinase A interacting protein 1
mm10_v2_chr7_+_121707189_121707189	0.0909921	Gli2	ENSMUST00000065310.2|1700069B07Rik|ENSMUSG00000053081.2|RIKEN cDNA 1700069B07 gene
mm10_v2_chr3_-_95357156_95357211	0.0868909	Gli2	ENSMUST00000107171.3|Setdb1|ENSMUSG00000015697.8|SET domain, bifurcated 1 	ENSMUST00000015841.5|Setdb1|ENSMUSG00000015697.8|SET domain, bifurcated 1 	ENSMUST00000107170.2|Setdb1|ENSMUSG00000015697.8|SET domain, bifurcated 1
mm10_v2_chr11_+_100619217_100619283	0.0854964	Gli2	ENSMUST00000107376.1|Nkiras2|ENSMUSG00000017837.6|NFKB inhibitor interacting Ras-like protein 2
mm10_v2_chr15_-_77970750_77970824	0.0854665	Gli2	ENSMUST00000100484.4|Eif3d|ENSMUSG00000016554.8|eukaryotic translation initiation factor 3, subunit D
mm10_v2_chr1_-_153332724_153332804	0.0851675	Gli2	ENSMUST00000027752.8|Lamc1|ENSMUSG00000026478.8|laminin, gamma 1
mm10_v2_chr4_+_155831630_155831698	0.0823261	Gli2	ENSMUST00000105592.1|Aurkaip1|ENSMUSG00000065990.6|aurora kinase A interacting protein 1 	ENSMUST00000105591.1|Aurkaip1|ENSMUSG00000065990.6|aurora kinase A interacting protein 1
mm10_v2_chr1_+_97770158_97770209	0.0813661	Gli2	ENSMUST00000112844.3|Gin1|ENSMUSG00000026333.8|gypsy retrotransposon integrase 1 	ENSMUST00000112842.1|Gin1|ENSMUSG00000026333.8|gypsy retrotransposon integrase 1 	ENSMUST00000027571.6|Gin1|ENSMUSG00000026333.8|gypsy retrotransposon integrase 1
mm10_v2_chr11_-_100619576_100619596	0.0797256	Gli2	ENSMUST00000155152.1|Dnajc7|ENSMUSG00000014195.9|DnaJ (Hsp40) homolog, subfamily C, member 7
mm10_v2_chr2_-_120609319_120609380	0.0773232	Gli2	ENSMUST00000102497.3|Lrrc57|ENSMUSG00000027286.10|leucine rich repeat containing 57
mm10_v2_chr2_+_49451486_49451559	0.0754414	Gli2	ENSMUST00000092123.4|Epc2|ENSMUSG00000069495.6|enhancer of polycomb homolog 2 (Drosophila)
mm10_v2_chr11_-_118909487_118909575	0.0739265	Gli2	ENSMUST00000117731.1|Rbfox3|ENSMUSG00000025576.11|RNA binding protein, fox-1 homolog (C. elegans) 3 	ENSMUST00000106278.2|Rbfox3|ENSMUSG00000025576.11|RNA binding protein, fox-1 homolog (C. elegans) 3 	ENSMUST00000120061.1|Rbfox3|ENSMUSG00000025576.11|RNA binding protein, fox-1 homolog (C. elegans) 3 	ENSMUST00000017576.4|Rbfox3|ENSMUSG00000025576.11|RNA binding protein, fox-1 homolog (C. elegans) 3
mm10_v2_chr7_+_81571246_81571318	0.0648071	Gli2	ENSMUST00000165460.1|Whamm|ENSMUSG00000045795.9|WAS protein homolog associated with actin, golgi membranes and microtubules
mm10_v2_chr2_-_120609283_120609317	0.0629101	Gli2	ENSMUST00000102496.1|Lrrc57|ENSMUSG00000027286.10|leucine rich repeat containing 57
mm10_v2_chr15_+_78899755_78899775	0.0622174	Gli2	ENSMUST00000001226.3|Sh3bp1|ENSMUSG00000022436.9|SH3-domain binding protein 1 	ENSMUST00000061239.7|Sh3bp1|ENSMUSG00000022436.9|SH3-domain binding protein 1 	ENSMUST00000109698.2|Sh3bp1|ENSMUSG00000022436.9|SH3-domain binding protein 1
mm10_v2_chr9_+_114978507_114978569	0.0561482	Gli2	ENSMUST00000183104.1|Osbpl10|ENSMUSG00000040875.6|oxysterol binding protein-like 10
mm10_v2_chr1_+_71652837_71652837	0.0533717	Gli2	ENSMUST00000097699.2|Apol7d|ENSMUSG00000073652.4|apolipoprotein L 7d
mm10_v2_chr4_-_154899077_154899135	0.0496425	Gli2	ENSMUST00000030935.3|Fam213b|ENSMUSG00000029059.3|family with sequence similarity 213, member B 	ENSMUST00000132281.1|Fam213b|ENSMUSG00000029059.3|family with sequence similarity 213, member B
mm10_v2_chr4_-_126968124_126968154	0.0467359	Gli2	ENSMUST00000106108.2|Zmym4|ENSMUSG00000042446.10|zinc finger, MYM-type 4
mm10_v2_chr11_+_32455362_32455438	0.0428123	Gli2	ENSMUST00000051053.4|Ubtd2|ENSMUSG00000044949.4|ubiquitin domain containing 2
mm10_v2_chr18_+_80206775_80206881	0.0352025	Gli2	ENSMUST00000145963.1|Txnl4a|ENSMUSG00000057130.5|thioredoxin-like 4A 	ENSMUST00000125127.1|Gm16286|ENSMUSG00000024571.8|predicted gene 16286 	ENSMUST00000025464.7|Txnl4a|ENSMUSG00000057130.5|thioredoxin-like 4A 	ENSMUST00000025463.7|Gm16286|ENSMUSG00000024571.8|predicted gene 16286
mm10_v2_chr4_-_19708922_19709004	0.0339071	Gli2	ENSMUST00000108246.2|Wwp1|ENSMUSG00000041058.9|WW domain containing E3 ubiquitin protein ligase 1
mm10_v2_chr2_-_120609500_120609524	0.0338637	Gli2	ENSMUST00000133612.1|Lrrc57|ENSMUSG00000027286.10|leucine rich repeat containing 57 	ENSMUST00000102498.1|Lrrc57|ENSMUSG00000027286.10|leucine rich repeat containing 57 	ENSMUST00000102499.1|Lrrc57|ENSMUSG00000027286.10|leucine rich repeat containing 57
mm10_v2_chr8_-_13890233_13890300	0.0333059	Gli2	ENSMUST00000033839.7|Coprs|ENSMUSG00000031458.7|coordinator of PRMT5, differentiation stimulator
mm10_v2_chr18_+_80206887_80206900	0.0319109	Gli2	ENSMUST00000127234.1|Gm16286|ENSMUSG00000024571.8|predicted gene 16286
mm10_v2_chr3_+_9250602_9250602	0.0291831	Gli2	ENSMUST00000155203.1|Zbtb10|ENSMUSG00000069114.8|zinc finger and BTB domain containing 10
mm10_v2_chr3_+_28781305_28781344	0.0265848	Gli2	ENSMUST00000060500.7|Eif5a2|ENSMUSG00000050192.7|eukaryotic translation initiation factor 5A2
mm10_v2_chr12_-_31950170_31950197	0.0250214	Gli2	ENSMUST00000176520.1|Hbp1|ENSMUSG00000002996.11|high mobility group box transcription factor 1
mm10_v2_chr17_-_56609689_56609771	0.0231578	Gli2	ENSMUST00000052832.5|2410015M20Rik|ENSMUSG00000049760.5|RIKEN cDNA 2410015M20 gene
mm10_v2_chr9_-_108578657_108578675	0.017778	Gli2	ENSMUST00000068700.5|Wdr6|ENSMUSG00000066357.5|WD repeat domain 6
mm10_v2_chr16_-_20302358_20302401	0.00741414	Gli2	ENSMUST00000048642.8|Parl|ENSMUSG00000033918.9|presenilin associated, rhomboid-like
mm10_v2_chr14_-_64949838_64949886	0.00631807	Gli2	ENSMUST00000067843.3|Hmbox1|ENSMUSG00000021972.8|homeobox containing 1 	ENSMUST00000176489.1|Hmbox1|ENSMUSG00000021972.8|homeobox containing 1 	ENSMUST00000175905.1|Hmbox1|ENSMUSG00000021972.8|homeobox containing 1 	ENSMUST00000022544.7|Hmbox1|ENSMUSG00000021972.8|homeobox containing 1 	ENSMUST00000175744.1|Hmbox1|ENSMUSG00000021972.8|homeobox containing 1 	ENSMUST00000176128.1|Hmbox1|ENSMUSG00000021972.8|homeobox containing 1
mm10_v2_chr8_-_27174623_27174651	0.00320937	Gli2	ENSMUST00000033878.6|Rab11fip1|ENSMUSG00000031488.7|RAB11 family interacting protein 1 (class I) 	ENSMUST00000054212.6|Rab11fip1|ENSMUSG00000031488.7|RAB11 family interacting protein 1 (class I)
