mm10_v2_chr6_-_23248264_23248390	8.21579	Hmga1	ENSMUST00000031709.5|Fezf1|ENSMUSG00000029697.5|Fez family zinc finger 1
mm10_v2_chr18_+_20665250_20665250	7.87609	Hmga1	ENSMUST00000075312.3|Ttr|ENSMUSG00000061808.3|transthyretin
mm10_v2_chr14_-_48667508_48667644	2.85928	Hmga1	ENSMUST00000144465.1|Otx2|ENSMUSG00000021848.9|orthodenticle homolog 2 (Drosophila) 	ENSMUST00000133479.1|Otx2|ENSMUSG00000021848.9|orthodenticle homolog 2 (Drosophila) 	ENSMUST00000119070.1|Otx2|ENSMUSG00000021848.9|orthodenticle homolog 2 (Drosophila) 	ENSMUST00000152018.1|Otx2|ENSMUSG00000021848.9|orthodenticle homolog 2 (Drosophila)
mm10_v2_chr17_+_85620816_85620843	2.75777	Hmga1	ENSMUST00000175898.2|Six3|ENSMUSG00000038805.9|sine oculis-related homeobox 3
mm10_v2_chr3_+_102010138_102010171	2.36156	Hmga1	ENSMUST00000066187.4|Nhlh2|ENSMUSG00000048540.7|nescient helix loop helix 2
mm10_v2_chr8_-_87959560_87959595	2.33352	Hmga1	ENSMUST00000109655.2|Zfp423|ENSMUSG00000045333.9|zinc finger protein 423
mm10_v2_chr1_+_45311538_45311638	2.14734	Hmga1	ENSMUST00000087883.6|Col3a1|ENSMUSG00000026043.12|collagen, type III, alpha 1
mm10_v2_chr16_-_26989974_26989974	2.05055	Hmga1	ENSMUST00000089832.4|Gmnc|ENSMUSG00000068428.6|geminin coiled-coil domain containing
mm10_v2_chr17_+_43953191_43953276	2.01141	Hmga1	ENSMUST00000044792.4|Rcan2|ENSMUSG00000039601.9|regulator of calcineurin 2
mm10_v2_chr10_+_4611971_4612021	1.78571	Hmga1	ENSMUST00000105590.1|Esr1|ENSMUSG00000019768.10|estrogen receptor 1 (alpha) 	ENSMUST00000067086.7|Esr1|ENSMUSG00000019768.10|estrogen receptor 1 (alpha)
mm10_v2_chr10_+_97482350_97482372	1.54735	Hmga1	ENSMUST00000163448.2|Dcn|ENSMUSG00000019929.9|decorin
mm10_v2_chr17_+_43952999_43953063	1.51402	Hmga1	ENSMUST00000177857.1|Rcan2|ENSMUSG00000039601.9|regulator of calcineurin 2
mm10_v2_chr3_-_88577208_88577208	1.41827	Hmga1	ENSMUST00000098952.2|Gm10704|ENSMUSG00000074479.2|predicted pseudogene 10704
mm10_v2_chr10_-_92165159_92165177	1.37733	Hmga1	ENSMUST00000182567.1|Rmst|ENSMUSG00000097348.2|rhabdomyosarcoma 2 associated transcript (non-coding RNA) 	ENSMUST00000181604.2|Rmst|ENSMUSG00000097348.2|rhabdomyosarcoma 2 associated transcript (non-coding RNA) 	ENSMUST00000181213.1|Rmst|ENSMUSG00000097348.2|rhabdomyosarcoma 2 associated transcript (non-coding RNA)
mm10_v2_chr9_-_100506844_100506856	1.37691	Hmga1	ENSMUST00000112874.3|Nck1|ENSMUSG00000032475.9|non-catalytic region of tyrosine kinase adaptor protein 1
mm10_v2_chr10_+_97565436_97565546	1.37106	Hmga1	ENSMUST00000038160.4|Lum|ENSMUSG00000036446.4|lumican
mm10_v2_chr12_-_108003594_108003613	1.35865	Hmga1	ENSMUST00000066060.4|Bcl11b|ENSMUSG00000048251.9|B cell leukemia/lymphoma 11B
mm10_v2_chr3_-_10208569_10208586	1.34476	Hmga1	ENSMUST00000029041.4|Fabp4|ENSMUSG00000062515.2|fatty acid binding protein 4, adipocyte
mm10_v2_chr1_+_107511416_107511431	1.28149	Hmga1	ENSMUST00000009356.4|Serpinb2|ENSMUSG00000062345.4|serine (or cysteine) peptidase inhibitor, clade B, member 2
mm10_v2_chr10_+_96136603_96136603	1.27142	Hmga1	ENSMUST00000074615.6|Gm5426|ENSMUSG00000096486.1|predicted pseudogene 5426
mm10_v2_chr4_-_36056726_36056726	1.26583	Hmga1	ENSMUST00000108124.3|Lingo2|ENSMUSG00000045083.8|leucine rich repeat and Ig domain containing 2
mm10_v2_chr4_-_97584605_97584610	1.25709	Hmga1	ENSMUST00000107067.1|E130114P18Rik|ENSMUSG00000048747.8|RIKEN cDNA E130114P18 gene
mm10_v2_chr18_+_35770318_35770318	1.25264	Hmga1	ENSMUST00000165299.1|Gm16490|ENSMUSG00000091842.1|predicted gene 16490
mm10_v2_chr14_+_26514554_26514554	1.18381	Hmga1	ENSMUST00000104927.1|Gm2178|ENSMUSG00000078128.1|predicted gene 2178
mm10_v2_chr6_-_25690729_25690729	1.15198	Hmga1	ENSMUST00000054867.6|Gpr37|ENSMUSG00000039904.8|G protein-coupled receptor 37
mm10_v2_chr17_+_28692568_28692616	1.14313	Hmga1	ENSMUST00000114752.1|Mapk14|ENSMUSG00000053436.8|mitogen-activated protein kinase 14
mm10_v2_chr15_-_56694525_56694554	1.08635	Hmga1	ENSMUST00000050544.7|Has2|ENSMUSG00000022367.7|hyaluronan synthase 2
mm10_v2_chr19_+_24875679_24875689	1.08458	Hmga1	ENSMUST00000073080.5|Gm10053|ENSMUSG00000058927.5|predicted gene 10053
mm10_v2_chr15_+_34238026_34238177	1.06774	Hmga1	ENSMUST00000022867.3|Laptm4b|ENSMUSG00000022257.3|lysosomal-associated protein transmembrane 4B
mm10_v2_chr10_+_88091070_88091076	1.03303	Hmga1	ENSMUST00000048621.7|Pmch|ENSMUSG00000035383.7|pro-melanin-concentrating hormone
mm10_v2_chr7_-_143460989_143461050	1.01878	Hmga1	ENSMUST00000167912.1|Cdkn1c|ENSMUSG00000037664.6|cyclin-dependent kinase inhibitor 1C (P57) 	ENSMUST00000037287.6|Cdkn1c|ENSMUSG00000037664.6|cyclin-dependent kinase inhibitor 1C (P57)
mm10_v2_chr15_+_79030874_79030933	1.01053	Hmga1	ENSMUST00000171999.1|Gcat|ENSMUSG00000006378.7|glycine C-acetyltransferase (2-amino-3-ketobutyrate-coenzyme A ligase) 	ENSMUST00000006544.7|Gcat|ENSMUSG00000006378.7|glycine C-acetyltransferase (2-amino-3-ketobutyrate-coenzyme A ligase)
mm10_v2_chr3_+_67892189_67892226	1.00468	Hmga1	ENSMUST00000063263.3|Iqcj|ENSMUSG00000051777.4|IQ motif containing J
mm10_v2_chr3_+_134236483_134236500	0.992524	Hmga1	ENSMUST00000181904.1|Cxxc4|ENSMUSG00000044365.10|CXXC finger 4 	ENSMUST00000053048.9|Cxxc4|ENSMUSG00000044365.10|CXXC finger 4
mm10_v2_chr10_+_102158858_102158889	0.991745	Hmga1	ENSMUST00000138522.1|Mgat4c|ENSMUSG00000019888.9|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative) 	ENSMUST00000163753.1|Mgat4c|ENSMUSG00000019888.9|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative) 	ENSMUST00000138016.1|Mgat4c|ENSMUSG00000019888.9|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative)
mm10_v2_chr2_+_125866107_125866282	0.979292	Hmga1	ENSMUST00000134337.1|Galk2|ENSMUSG00000027207.9|galactokinase 2 	ENSMUST00000094604.2|Galk2|ENSMUSG00000027207.9|galactokinase 2 	ENSMUST00000134798.1|Galk2|ENSMUSG00000027207.9|galactokinase 2
mm10_v2_chr10_-_33624587_33624769	0.977553	Hmga1	ENSMUST00000160299.1|Clvs2|ENSMUSG00000019785.7|clavesin 2 	ENSMUST00000019920.6|Clvs2|ENSMUSG00000019785.7|clavesin 2
mm10_v2_chr10_+_11609256_11609269	0.977494	Hmga1	ENSMUST00000052902.7|Gm9797|ENSMUSG00000045455.7|predicted pseudogene 9797
mm10_v2_chr10_+_53596936_53597004	0.969208	Hmga1	ENSMUST00000020004.6|Asf1a|ENSMUSG00000019857.6|ASF1 anti-silencing function 1 homolog A (S. cerevisiae)
mm10_v2_chr16_-_59632520_59632541	0.968499	Hmga1	ENSMUST00000118438.1|Arl6|ENSMUSG00000022722.12|ADP-ribosylation factor-like 6
mm10_v2_chr1_-_158814469_158814469	0.966892	Hmga1	ENSMUST00000161589.2|Pappa2|ENSMUSG00000073530.5|pappalysin 2
mm10_v2_chr7_-_139582790_139582808	0.913995	Hmga1	ENSMUST00000106095.2|Nkx6-2|ENSMUSG00000041309.11|NK6 homeobox 2
mm10_v2_chr7_-_84679346_84679401	0.913212	Hmga1	ENSMUST00000069537.2|Zfand6|ENSMUSG00000030629.8|zinc finger, AN1-type domain 6 	ENSMUST00000178385.1|Zfand6|ENSMUSG00000030629.8|zinc finger, AN1-type domain 6
mm10_v2_chr19_-_24861828_24861855	0.896065	Hmga1	ENSMUST00000047666.4|Pgm5|ENSMUSG00000041731.7|phosphoglucomutase 5
mm10_v2_chr4_-_97584612_97584643	0.885617	Hmga1	ENSMUST00000107068.2|E130114P18Rik|ENSMUSG00000048747.8|RIKEN cDNA E130114P18 gene
mm10_v2_chr7_+_67647405_67647456	0.882809	Hmga1	ENSMUST00000032774.8|Ttc23|ENSMUSG00000030555.9|tetratricopeptide repeat domain 23 	ENSMUST00000107471.1|Ttc23|ENSMUSG00000030555.9|tetratricopeptide repeat domain 23
mm10_v2_chr10_-_35711891_35711891	0.78386	Hmga1	ENSMUST00000080898.2|Amd2|ENSMUSG00000063953.2|S-adenosylmethionine decarboxylase 2
mm10_v2_chr3_-_150073620_150073620	0.761244	Hmga1	ENSMUST00000057740.5|Rpsa-ps10|ENSMUSG00000047676.5|ribosomal protein SA, pseudogene 10
mm10_v2_chr6_+_88724828_88724924	0.746844	Hmga1	ENSMUST00000089449.2|Mgll|ENSMUSG00000033174.11|monoglyceride lipase
mm10_v2_chr2_-_79908389_79908403	0.715205	Hmga1	ENSMUST00000090756.4|Pde1a|ENSMUSG00000059173.13|phosphodiesterase 1A, calmodulin-dependent
mm10_v2_chr19_+_9283231_9283265	0.712473	Hmga1	ENSMUST00000088040.4|Pcna-ps2|ENSMUSG00000067608.4|proliferating cell nuclear antigen pseudogene 2
mm10_v2_chr13_-_56895737_56895793	0.706936	Hmga1	ENSMUST00000022023.6|Trpc7|ENSMUSG00000021541.7|transient receptor potential cation channel, subfamily C, member 7 	ENSMUST00000109871.1|Trpc7|ENSMUSG00000021541.7|transient receptor potential cation channel, subfamily C, member 7
mm10_v2_chr4_+_101507947_101508032	0.703597	Hmga1	ENSMUST00000149047.1|Dnajc6|ENSMUSG00000028528.10|DnaJ (Hsp40) homolog, subfamily C, member 6 	ENSMUST00000106929.3|Dnajc6|ENSMUSG00000028528.10|DnaJ (Hsp40) homolog, subfamily C, member 6
mm10_v2_chr4_+_109676568_109676590	0.697233	Hmga1	ENSMUST00000102724.4|Faf1|ENSMUSG00000010517.7|Fas-associated factor 1
mm10_v2_chr1_+_45981548_45981548	0.691392	Hmga1	ENSMUST00000085632.2|Rpl23a-ps1|ENSMUSG00000070896.1|ribosomal protein 23A, pseudogene 1
mm10_v2_chr14_-_46788267_46788411	0.685742	Hmga1	ENSMUST00000015903.4|Cnih1|ENSMUSG00000015759.4|cornichon homolog 1 (Drosophila)
mm10_v2_chr4_+_105789869_105789869	0.684412	Hmga1	ENSMUST00000184254.1|Gm12728|ENSMUSG00000083780.2|predicted gene 12728
mm10_v2_chr7_+_46847128_46847150	0.681578	Hmga1	ENSMUST00000005051.4|Ldha|ENSMUSG00000063229.8|lactate dehydrogenase A
mm10_v2_chr4_-_92191749_92191749	0.674574	Hmga1	ENSMUST00000123179.1|Gm12666|ENSMUSG00000066107.6|predicted gene 12666
mm10_v2_chr2_-_140671462_140671476	0.674399	Hmga1	ENSMUST00000110057.2|Flrt3|ENSMUSG00000051379.6|fibronectin leucine rich transmembrane protein 3
mm10_v2_chr7_-_28302238_28302238	0.666568	Hmga1	ENSMUST00000108315.3|Dll3|ENSMUSG00000003436.11|delta-like 3 (Drosophila)
mm10_v2_chr9_+_57521232_57521314	0.659454	Hmga1	ENSMUST00000000090.6|Cox5a|ENSMUSG00000000088.6|cytochrome c oxidase subunit Va
mm10_v2_chrX_-_23285532_23285578	0.656648	Hmga1	ENSMUST00000115319.2|Klhl13|ENSMUSG00000036782.7|kelch-like 13
mm10_v2_chr12_-_10900296_10900318	0.651678	Hmga1	ENSMUST00000085735.2|Pgk1-rs7|ENSMUSG00000066632.2|phosphoglycerate kinase-1, related sequence-7
mm10_v2_chr11_-_82829024_82829043	0.649331	Hmga1	ENSMUST00000021036.6|Rffl|ENSMUSG00000020696.12|ring finger and FYVE like domain containing protein 	ENSMUST00000074515.4|Rffl|ENSMUSG00000020696.12|ring finger and FYVE like domain containing protein 	ENSMUST00000103218.2|Rffl|ENSMUSG00000020696.12|ring finger and FYVE like domain containing protein
mm10_v2_chr2_+_20737306_20737321	0.64694	Hmga1	ENSMUST00000114606.1|Etl4|ENSMUSG00000036617.10|enhancer trap locus 4 	ENSMUST00000114608.1|Etl4|ENSMUSG00000036617.10|enhancer trap locus 4
mm10_v2_chr9_-_70421533_70421592	0.624848	Hmga1	ENSMUST00000034742.6|Ccnb2|ENSMUSG00000032218.6|cyclin B2
mm10_v2_chr6_+_135065651_135065682	0.623628	Hmga1	ENSMUST00000050104.7|Gprc5a|ENSMUSG00000046733.7|G protein-coupled receptor, family C, group 5, member A
mm10_v2_chr4_+_105157339_105157354	0.623364	Hmga1	ENSMUST00000064139.7|Ppap2b|ENSMUSG00000028517.8|phosphatidic acid phosphatase type 2B
mm10_v2_chr15_+_44196135_44196233	0.618075	Hmga1	ENSMUST00000038856.6|Trhr|ENSMUSG00000038760.7|thyrotropin releasing hormone receptor 	ENSMUST00000110289.3|Trhr|ENSMUSG00000038760.7|thyrotropin releasing hormone receptor
mm10_v2_chr15_+_31276491_31276491	0.614468	Hmga1	ENSMUST00000068987.5|Fam136b-ps|ENSMUSG00000055416.5|family with sequence similarity 136, member B, pseudogene
mm10_v2_chr2_-_69206146_69206194	0.608645	Hmga1	ENSMUST00000127243.1|Spc25|ENSMUSG00000005233.10|SPC25, NDC80 kinetochore complex component, homolog (S. cerevisiae) 	ENSMUST00000149643.1|Spc25|ENSMUSG00000005233.10|SPC25, NDC80 kinetochore complex component, homolog (S. cerevisiae) 	ENSMUST00000167875.2|Spc25|ENSMUSG00000005233.10|SPC25, NDC80 kinetochore complex component, homolog (S. cerevisiae) 	ENSMUST00000005365.8|Spc25|ENSMUSG00000005233.10|SPC25, NDC80 kinetochore complex component, homolog (S. cerevisiae)
mm10_v2_chrX_-_163761323_163761344	0.603708	Hmga1	ENSMUST00000059320.2|Rnf138rt1|ENSMUSG00000083695.5|ring finger protein 138, retrogene 1
mm10_v2_chr1_+_59482133_59482179	0.599404	Hmga1	ENSMUST00000114246.2|Fzd7|ENSMUSG00000041075.7|frizzled homolog 7 (Drosophila) 	ENSMUST00000037105.6|Fzd7|ENSMUSG00000041075.7|frizzled homolog 7 (Drosophila)
mm10_v2_chr14_+_105681824_105681831	0.594246	Hmga1	ENSMUST00000073238.6|Gm10076|ENSMUSG00000060143.6|predicted gene 10076
mm10_v2_chr10_+_96616998_96617015	0.593627	Hmga1	ENSMUST00000038377.7|Btg1|ENSMUSG00000036478.7|B cell translocation gene 1, anti-proliferative
mm10_v2_chr2_-_164389095_164389095	0.584306	Hmga1	ENSMUST00000167427.1|Slpi|ENSMUSG00000017002.8|secretory leukocyte peptidase inhibitor
mm10_v2_chr4_-_40279389_40279434	0.574981	Hmga1	ENSMUST00000108108.2|Ndufb6|ENSMUSG00000071014.4|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 6 	ENSMUST00000095128.3|Ndufb6|ENSMUSG00000071014.4|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 6
mm10_v2_chr1_+_109993982_109993982	0.566528	Hmga1	ENSMUST00000027542.6|Cdh7|ENSMUSG00000026312.11|cadherin 7, type 2
mm10_v2_chr19_-_32466575_32466575	0.562068	Hmga1	ENSMUST00000078034.3|Rpl9-ps6|ENSMUSG00000062456.3|ribosomal protein L9, pseudogene 6
mm10_v2_chr1_-_89933290_89933290	0.547987	Hmga1	ENSMUST00000036954.7|Gbx2|ENSMUSG00000034486.7|gastrulation brain homeobox 2
mm10_v2_chr3_+_106034661_106034692	0.544828	Hmga1	ENSMUST00000170669.2|Gm4540|ENSMUSG00000092072.2|predicted gene 4540
mm10_v2_chr11_+_101627942_101627972	0.536936	Hmga1	ENSMUST00000010506.3|Rdm1|ENSMUSG00000010362.3|RAD52 motif 1
mm10_v2_chr18_-_62741387_62741387	0.532859	Hmga1	ENSMUST00000097557.3|Spink13|ENSMUSG00000073551.3|serine peptidase inhibitor, Kazal type 13
mm10_v2_chr2_-_69206133_69206144	0.519006	Hmga1	ENSMUST00000112320.1|Spc25|ENSMUSG00000005233.10|SPC25, NDC80 kinetochore complex component, homolog (S. cerevisiae)
mm10_v2_chr15_-_36598019_36598124	0.514946	Hmga1	ENSMUST00000155116.1|Pabpc1|ENSMUSG00000022283.8|poly(A) binding protein, cytoplasmic 1
mm10_v2_chr6_-_99028874_99028942	0.502628	Hmga1	ENSMUST00000154163.2|Foxp1|ENSMUSG00000030067.11|forkhead box P1
mm10_v2_chr13_-_18031616_18031629	0.501336	Hmga1	ENSMUST00000099736.2|Vdac3-ps1|ENSMUSG00000075053.2|voltage-dependent anion channel 3, pseudogene 1
mm10_v2_chr12_+_100110148_100110193	0.49672	Hmga1	ENSMUST00000021595.8|Psmc1|ENSMUSG00000021178.8|protease (prosome, macropain) 26S subunit, ATPase 1
mm10_v2_chr7_-_126704816_126704854	0.49598	Hmga1	ENSMUST00000032949.7|Coro1a|ENSMUSG00000030707.9|coronin, actin binding protein 1A
mm10_v2_chr2_+_130277157_130277315	0.495008	Hmga1	ENSMUST00000028890.8|Nop56|ENSMUSG00000027405.10|NOP56 ribonucleoprotein 	ENSMUST00000159373.1|Nop56|ENSMUSG00000027405.10|NOP56 ribonucleoprotein
mm10_v2_chr2_-_140671400_140671427	0.494313	Hmga1	ENSMUST00000056760.3|Flrt3|ENSMUSG00000051379.6|fibronectin leucine rich transmembrane protein 3
mm10_v2_chr5_+_124579134_124579184	0.483148	Hmga1	ENSMUST00000031333.3|Gtf2h3|ENSMUSG00000029387.4|general transcription factor IIH, polypeptide 3
mm10_v2_chr15_+_82345954_82346035	0.481937	Hmga1	ENSMUST00000023086.8|Smdt1|ENSMUSG00000022452.8|single-pass membrane protein with aspartate rich tail 1
mm10_v2_chr8_-_111854278_111854356	0.479165	Hmga1	ENSMUST00000034432.5|Cfdp1|ENSMUSG00000031954.5|craniofacial development protein 1
mm10_v2_chr11_+_6415443_6415443	0.479105	Hmga1	ENSMUST00000132846.1|Ppia|ENSMUSG00000071866.5|peptidylprolyl isomerase A
mm10_v2_chr17_-_24073479_24073490	0.474498	Hmga1	ENSMUST00000017090.5|Kctd5|ENSMUSG00000016946.5|potassium channel tetramerisation domain containing 5
mm10_v2_chr2_+_14388434_14388512	0.473955	Hmga1	ENSMUST00000133258.1|Slc39a12|ENSMUSG00000036949.10|solute carrier family 39 (zinc transporter), member 12
mm10_v2_chr5_-_88527841_88527891	0.47259	Hmga1	ENSMUST00000087033.3|Igj|ENSMUSG00000067149.3|immunoglobulin joining chain
mm10_v2_chr6_-_125191535_125191620	0.470876	Hmga1	ENSMUST00000043848.4|Ncapd2|ENSMUSG00000038252.7|non-SMC condensin I complex, subunit D2
mm10_v2_chrX_-_17571563_17571641	0.470559	Hmga1	ENSMUST00000177213.1|Fundc1|ENSMUSG00000025040.7|FUN14 domain containing 1
mm10_v2_chr11_+_22512088_22512088	0.470317	Hmga1	ENSMUST00000059319.7|Tmem17|ENSMUSG00000049904.7|transmembrane protein 17
mm10_v2_chr7_-_113347273_113347293	0.464073	Hmga1	ENSMUST00000117577.1|Btbd10|ENSMUSG00000038187.8|BTB (POZ) domain containing 10
mm10_v2_chr1_-_171150588_171150609	0.463344	Hmga1	ENSMUST00000155798.1|Sdhc|ENSMUSG00000058076.6|succinate dehydrogenase complex, subunit C, integral membrane protein 	ENSMUST00000081560.4|Sdhc|ENSMUSG00000058076.6|succinate dehydrogenase complex, subunit C, integral membrane protein 	ENSMUST00000111336.3|Sdhc|ENSMUSG00000058076.6|succinate dehydrogenase complex, subunit C, integral membrane protein
mm10_v2_chr1_-_140183283_140183332	0.455413	Hmga1	ENSMUST00000111977.1|Cfh|ENSMUSG00000026365.9|complement component factor h
mm10_v2_chr18_-_36726730_36726745	0.455323	Hmga1	ENSMUST00000061829.6|Cd14|ENSMUSG00000051439.6|CD14 antigen
mm10_v2_chr13_-_114388057_114388094	0.447877	Hmga1	ENSMUST00000022286.6|Ndufs4|ENSMUSG00000021764.6|NADH dehydrogenase (ubiquinone) Fe-S protein 4
mm10_v2_chr11_-_98625661_98625661	0.44449	Hmga1	ENSMUST00000104933.1|Gm12355|ENSMUSG00000078134.1|predicted gene 12355
mm10_v2_chr14_-_52104015_52104028	0.442764	Hmga1	ENSMUST00000111610.4|Hnrnpc|ENSMUSG00000060373.8|heterogeneous nuclear ribonucleoprotein C 	ENSMUST00000164655.1|Hnrnpc|ENSMUSG00000060373.8|heterogeneous nuclear ribonucleoprotein C
mm10_v2_chr7_+_67655414_67655447	0.441581	Hmga1	ENSMUST00000107470.1|Ttc23|ENSMUSG00000030555.9|tetratricopeptide repeat domain 23
mm10_v2_chr14_+_113314602_113314608	0.435548	Hmga1	ENSMUST00000072359.6|Tpm3-rs7|ENSMUSG00000058126.6|tropomyosin 3, related sequence 7
mm10_v2_chr9_+_65890237_65890343	0.435292	Hmga1	ENSMUST00000045802.6|2810417H13Rik|ENSMUSG00000040204.6|RIKEN cDNA 2810417H13 gene
mm10_v2_chr18_+_11633276_11633357	0.433917	Hmga1	ENSMUST00000115861.2|Rbbp8|ENSMUSG00000041238.9|retinoblastoma binding protein 8
mm10_v2_chr5_+_8046077_8046078	0.427321	Hmga1	ENSMUST00000088786.4|Sri|ENSMUSG00000003161.9|sorcin
mm10_v2_chr7_-_126704736_126704762	0.425219	Hmga1	ENSMUST00000131415.1|Coro1a|ENSMUSG00000030707.9|coronin, actin binding protein 1A
mm10_v2_chr1_-_52499980_52499980	0.423361	Hmga1	ENSMUST00000164747.1|Nab1|ENSMUSG00000002881.8|Ngfi-A binding protein 1
mm10_v2_chr4_-_123750236_123750345	0.419905	Hmga1	ENSMUST00000102636.3|Akirin1|ENSMUSG00000023075.9|akirin 1
mm10_v2_chr1_-_162898665_162898728	0.419255	Hmga1	ENSMUST00000111510.1|Fmo2|ENSMUSG00000040170.7|flavin containing monooxygenase 2 	ENSMUST00000045902.6|Fmo2|ENSMUSG00000040170.7|flavin containing monooxygenase 2
mm10_v2_chr18_+_75000469_75000487	0.418397	Hmga1	ENSMUST00000079716.5|Rpl17|ENSMUSG00000062328.7|ribosomal protein L17
mm10_v2_chr11_-_107189325_107189381	0.400869	Hmga1	ENSMUST00000018577.7|Nol11|ENSMUSG00000018433.8|nucleolar protein 11 	ENSMUST00000106757.1|Nol11|ENSMUSG00000018433.8|nucleolar protein 11
mm10_v2_chr9_-_78489141_78489166	0.399129	Hmga1	ENSMUST00000154207.1|Eef1a1|ENSMUSG00000037742.8|eukaryotic translation elongation factor 1 alpha 1
mm10_v2_chr19_-_37330613_37330613	0.392073	Hmga1	ENSMUST00000131070.1|Ide|ENSMUSG00000056999.8|insulin degrading enzyme
mm10_v2_chr8_+_45658731_45658804	0.386692	Hmga1	ENSMUST00000143820.1|Sorbs2|ENSMUSG00000031626.10|sorbin and SH3 domain containing 2 	ENSMUST00000132139.1|Sorbs2|ENSMUSG00000031626.10|sorbin and SH3 domain containing 2
mm10_v2_chr15_+_99074968_99075005	0.380913	Hmga1	ENSMUST00000039665.6|Troap|ENSMUSG00000032783.8|trophinin associated protein
mm10_v2_chr8_+_45658666_45658728	0.377611	Hmga1	ENSMUST00000134675.1|Sorbs2|ENSMUSG00000031626.10|sorbin and SH3 domain containing 2 	ENSMUST00000139869.1|Sorbs2|ENSMUSG00000031626.10|sorbin and SH3 domain containing 2 	ENSMUST00000126067.1|Sorbs2|ENSMUSG00000031626.10|sorbin and SH3 domain containing 2
mm10_v2_chr6_-_136875794_136875811	0.373213	Hmga1	ENSMUST00000032342.1|Mgp|ENSMUSG00000030218.1|matrix Gla protein
mm10_v2_chr6_-_30390997_30391029	0.372144	Hmga1	ENSMUST00000152391.2|Zc3hc1|ENSMUSG00000039130.12|zinc finger, C3HC type 1 	ENSMUST00000115184.1|Zc3hc1|ENSMUSG00000039130.12|zinc finger, C3HC type 1 	ENSMUST00000080812.7|Zc3hc1|ENSMUSG00000039130.12|zinc finger, C3HC type 1 	ENSMUST00000102992.3|Zc3hc1|ENSMUSG00000039130.12|zinc finger, C3HC type 1
mm10_v2_chr11_+_108682602_108682639	0.370391	Hmga1	ENSMUST00000106718.3|Cep112|ENSMUSG00000020728.11|centrosomal protein 112 	ENSMUST00000106715.1|Cep112|ENSMUSG00000020728.11|centrosomal protein 112 	ENSMUST00000106724.3|Cep112|ENSMUSG00000020728.11|centrosomal protein 112
mm10_v2_chr7_-_60005101_60005151	0.369086	Hmga1	ENSMUST00000059305.10|Snrpn|ENSMUSG00000000948.10|small nuclear ribonucleoprotein N
mm10_v2_chr10_+_37139558_37139558	0.355663	Hmga1	ENSMUST00000062667.3|5930403N24Rik|ENSMUSG00000046463.3|RIKEN cDNA 5930403N24 gene
mm10_v2_chr6_-_99044414_99044459	0.354719	Hmga1	ENSMUST00000177507.1|Foxp1|ENSMUSG00000030067.11|forkhead box P1 	ENSMUST00000123992.1|Foxp1|ENSMUSG00000030067.11|forkhead box P1
mm10_v2_chr1_+_4808237_4808287	0.352935	Hmga1	ENSMUST00000131119.1|Lypla1|ENSMUSG00000025903.8|lysophospholipase 1
mm10_v2_chr3_-_63851251_63851359	0.347672	Hmga1	ENSMUST00000162269.2|Plch1|ENSMUSG00000036834.10|phospholipase C, eta 1 	ENSMUST00000159676.2|Plch1|ENSMUSG00000036834.10|phospholipase C, eta 1 	ENSMUST00000175947.1|Plch1|ENSMUSG00000036834.10|phospholipase C, eta 1
mm10_v2_chr18_+_56562443_56562593	0.337482	Hmga1	ENSMUST00000130163.1|Phax|ENSMUSG00000008301.5|phosphorylated adaptor for RNA export 	ENSMUST00000132628.1|Phax|ENSMUSG00000008301.5|phosphorylated adaptor for RNA export
mm10_v2_chr15_-_99651580_99651656	0.33687	Hmga1	ENSMUST00000171908.1|Racgap1|ENSMUSG00000023015.7|Rac GTPase-activating protein 1 	ENSMUST00000171702.1|Racgap1|ENSMUSG00000023015.7|Rac GTPase-activating protein 1 	ENSMUST00000109581.2|Racgap1|ENSMUSG00000023015.7|Rac GTPase-activating protein 1 	ENSMUST00000169810.1|Racgap1|ENSMUSG00000023015.7|Rac GTPase-activating protein 1 	ENSMUST00000023756.5|Racgap1|ENSMUSG00000023015.7|Rac GTPase-activating protein 1
mm10_v2_chr6_-_99435345_99435368	0.336678	Hmga1	ENSMUST00000113322.2|Foxp1|ENSMUSG00000030067.11|forkhead box P1 	ENSMUST00000176850.1|Foxp1|ENSMUSG00000030067.11|forkhead box P1 	ENSMUST00000176632.1|Foxp1|ENSMUSG00000030067.11|forkhead box P1
mm10_v2_chr10_+_5593718_5593739	0.336038	Hmga1	ENSMUST00000051809.8|Myct1|ENSMUSG00000046916.8|myc target 1
mm10_v2_chr5_+_33018816_33018865	0.332637	Hmga1	ENSMUST00000019109.7|Ywhah|ENSMUSG00000018965.10|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide
mm10_v2_chr12_-_65073927_65073954	0.331743	Hmga1	ENSMUST00000021332.8|Fkbp3|ENSMUSG00000020949.8|FK506 binding protein 3
mm10_v2_chr2_+_14388316_14388420	0.330802	Hmga1	ENSMUST00000114731.1|Slc39a12|ENSMUSG00000036949.10|solute carrier family 39 (zinc transporter), member 12 	ENSMUST00000082290.7|Slc39a12|ENSMUSG00000036949.10|solute carrier family 39 (zinc transporter), member 12
mm10_v2_chr5_-_124579045_124579131	0.329547	Hmga1	ENSMUST00000135361.1|Eif2b1|ENSMUSG00000029388.8|eukaryotic translation initiation factor 2B, subunit 1 (alpha) 	ENSMUST00000031334.8|Eif2b1|ENSMUSG00000029388.8|eukaryotic translation initiation factor 2B, subunit 1 (alpha)
mm10_v2_chr5_+_104046980_104047154	0.322982	Hmga1	ENSMUST00000134313.1|Nudt9|ENSMUSG00000029310.7|nudix (nucleoside diphosphate linked moiety X)-type motif 9
mm10_v2_chr15_-_100424092_100424173	0.321911	Hmga1	ENSMUST00000154676.1|Slc11a2|ENSMUSG00000023030.10|solute carrier family 11 (proton-coupled divalent metal ion transporters), member 2
mm10_v2_chr6_-_39810881_39810988	0.315792	Hmga1	ENSMUST00000114797.1|Mrps33|ENSMUSG00000029918.8|mitochondrial ribosomal protein S33 	ENSMUST00000031978.8|Mrps33|ENSMUSG00000029918.8|mitochondrial ribosomal protein S33
mm10_v2_chr1_-_140183404_140183415	0.307924	Hmga1	ENSMUST00000066859.6|Cfh|ENSMUSG00000026365.9|complement component factor h 	ENSMUST00000111976.2|Cfh|ENSMUSG00000026365.9|complement component factor h
mm10_v2_chr11_+_69395647_69395754	0.305005	Hmga1	ENSMUST00000144531.1|Lsmd1|ENSMUSG00000059278.3|LSM domain containing 1
mm10_v2_chr3_-_104864420_104864505	0.304619	Hmga1	ENSMUST00000094028.5|Capza1|ENSMUSG00000070372.7|capping protein (actin filament) muscle Z-line, alpha 1
mm10_v2_chr1_-_44019929_44020006	0.286556	Hmga1	ENSMUST00000061421.3|Mettl21c|ENSMUSG00000047343.4|methyltransferase like 21C
mm10_v2_chr3_+_124321031_124321113	0.28555	Hmga1	ENSMUST00000058994.4|Tram1l1|ENSMUSG00000044528.4|translocation associated membrane protein 1-like 1
mm10_v2_chr15_+_41447438_41447482	0.283929	Hmga1	ENSMUST00000110297.2|Oxr1|ENSMUSG00000022307.9|oxidation resistance 1 	ENSMUST00000090096.4|Oxr1|ENSMUSG00000022307.9|oxidation resistance 1
mm10_v2_chr5_-_124578992_124579044	0.281571	Hmga1	ENSMUST00000128920.1|Eif2b1|ENSMUSG00000029388.8|eukaryotic translation initiation factor 2B, subunit 1 (alpha)
mm10_v2_chr6_-_13871459_13871471	0.278794	Hmga1	ENSMUST00000155856.1|2610001J05Rik|ENSMUSG00000052419.6|RIKEN cDNA 2610001J05 gene
mm10_v2_chr15_+_99006056_99006056	0.272197	Hmga1	ENSMUST00000079818.3|Gm8973|ENSMUSG00000064081.3|predicted gene 8973
mm10_v2_chr2_-_21205342_21205371	0.268814	Hmga1	ENSMUST00000027992.2|Enkur|ENSMUSG00000026679.3|enkurin, TRPC channel interacting protein
mm10_v2_chr5_-_5266038_5266292	0.267103	Hmga1	ENSMUST00000115451.1|Cdk14|ENSMUSG00000028926.9|cyclin-dependent kinase 14 	ENSMUST00000115452.1|Cdk14|ENSMUSG00000028926.9|cyclin-dependent kinase 14 	ENSMUST00000131392.1|Cdk14|ENSMUSG00000028926.9|cyclin-dependent kinase 14
mm10_v2_chr3_-_20242173_20242187	0.26617	Hmga1	ENSMUST00000001921.1|Cpa3|ENSMUSG00000001865.1|carboxypeptidase A3, mast cell
mm10_v2_chr6_+_17636983_17637014	0.265003	Hmga1	ENSMUST00000015877.7|Capza2|ENSMUSG00000015733.7|capping protein (actin filament) muscle Z-line, alpha 2
mm10_v2_chrX_-_136741155_136741352	0.261946	Hmga1	ENSMUST00000166930.1|Morf4l2|ENSMUSG00000031422.10|mortality factor 4 like 2 	ENSMUST00000113095.1|Morf4l2|ENSMUSG00000031422.10|mortality factor 4 like 2 	ENSMUST00000155207.1|Morf4l2|ENSMUSG00000031422.10|mortality factor 4 like 2 	ENSMUST00000080411.6|Morf4l2|ENSMUSG00000031422.10|mortality factor 4 like 2 	ENSMUST00000169418.1|Morf4l2|ENSMUSG00000031422.10|mortality factor 4 like 2
mm10_v2_chr3_+_97901190_97901250	0.260652	Hmga1	ENSMUST00000029476.2|Sec22b|ENSMUSG00000027879.3|SEC22 vesicle trafficking protein homolog B (S. cerevisiae) 	ENSMUST00000122288.1|Sec22b|ENSMUSG00000027879.3|SEC22 vesicle trafficking protein homolog B (S. cerevisiae)
mm10_v2_chr19_-_47919269_47919305	0.252279	Hmga1	ENSMUST00000095998.5|Itprip|ENSMUSG00000079254.3|inositol 1,4,5-triphosphate receptor interacting protein
mm10_v2_chr4_+_21727726_21727790	0.252148	Hmga1	ENSMUST00000102997.1|Ccnc|ENSMUSG00000028252.14|cyclin C 	ENSMUST00000120679.1|Ccnc|ENSMUSG00000028252.14|cyclin C 	ENSMUST00000108240.2|Ccnc|ENSMUSG00000028252.14|cyclin C
mm10_v2_chr11_-_79962374_79962398	0.251198	Hmga1	ENSMUST00000108241.1|Utp6|ENSMUSG00000035575.5|UTP6, small subunit (SSU) processome component, homolog (yeast) 	ENSMUST00000043152.5|Utp6|ENSMUSG00000035575.5|UTP6, small subunit (SSU) processome component, homolog (yeast)
mm10_v2_chr5_+_48242549_48242549	0.250382	Hmga1	ENSMUST00000172493.1|Slit2|ENSMUSG00000031558.9|slit homolog 2 (Drosophila)
mm10_v2_chr6_-_30693676_30693749	0.248569	Hmga1	ENSMUST00000169422.1|Cep41|ENSMUSG00000029790.10|centrosomal protein 41 	ENSMUST00000115131.1|Cep41|ENSMUSG00000029790.10|centrosomal protein 41 	ENSMUST00000115130.2|Cep41|ENSMUSG00000029790.10|centrosomal protein 41 	ENSMUST00000031810.8|Cep41|ENSMUSG00000029790.10|centrosomal protein 41
mm10_v2_chr15_-_101054399_101054399	0.247228	Hmga1	ENSMUST00000178140.1|Fignl2|ENSMUSG00000095440.1|fidgetin-like 2
mm10_v2_chr2_-_51149100_51149115	0.241691	Hmga1	ENSMUST00000154545.1|Rnd3|ENSMUSG00000017144.2|Rho family GTPase 3 	ENSMUST00000017288.2|Rnd3|ENSMUSG00000017144.2|Rho family GTPase 3
mm10_v2_chr13_+_21495218_21495260	0.239705	Hmga1	ENSMUST00000104942.1|AK157302|ENSMUSG00000078139.3|cDNA sequence AK157302
mm10_v2_chrX_-_59568068_59568094	0.237155	Hmga1	ENSMUST00000119833.1|Fgf13|ENSMUSG00000031137.11|fibroblast growth factor 13 	ENSMUST00000131319.1|Fgf13|ENSMUSG00000031137.11|fibroblast growth factor 13
mm10_v2_chr16_-_57754707_57754737	0.235962	Hmga1	ENSMUST00000089332.4|Col8a1|ENSMUSG00000068196.4|collagen, type VIII, alpha 1
mm10_v2_chr16_+_20672716_20672859	0.233405	Hmga1	ENSMUST00000044783.7|Eif4g1|ENSMUSG00000045983.9|eukaryotic translation initiation factor 4, gamma 1 	ENSMUST00000115463.1|Eif4g1|ENSMUSG00000045983.9|eukaryotic translation initiation factor 4, gamma 1 	ENSMUST00000142344.1|Eif4g1|ENSMUSG00000045983.9|eukaryotic translation initiation factor 4, gamma 1 	ENSMUST00000073840.5|Eif4g1|ENSMUSG00000045983.9|eukaryotic translation initiation factor 4, gamma 1 	ENSMUST00000140576.1|Eif4g1|ENSMUSG00000045983.9|eukaryotic translation initiation factor 4, gamma 1 	ENSMUST00000115457.1|Eif4g1|ENSMUSG00000045983.9|eukaryotic translation initiation factor 4, gamma 1
mm10_v2_chrX_-_103483205_103483225	0.231677	Hmga1	ENSMUST00000127786.2|Xist|ENSMUSG00000086503.2|inactive X specific transcripts
mm10_v2_chr15_+_41830921_41831001	0.231244	Hmga1	ENSMUST00000166917.1|Oxr1|ENSMUSG00000022307.9|oxidation resistance 1
mm10_v2_chrX_+_159303266_159303281	0.228765	Hmga1	ENSMUST00000112491.1|Rps6ka3|ENSMUSG00000031309.9|ribosomal protein S6 kinase polypeptide 3
mm10_v2_chr12_+_72441933_72441970	0.225329	Hmga1	ENSMUST00000161284.1|Lrrc9|ENSMUSG00000021090.9|leucine rich repeat containing 9
mm10_v2_chrX_-_17572241_17572325	0.220817	Hmga1	ENSMUST00000176638.1|Fundc1|ENSMUSG00000025040.7|FUN14 domain containing 1 	ENSMUST00000026016.6|Fundc1|ENSMUSG00000025040.7|FUN14 domain containing 1
mm10_v2_chrX_-_59567348_59567472	0.220468	Hmga1	ENSMUST00000124402.1|Fgf13|ENSMUSG00000031137.11|fibroblast growth factor 13
mm10_v2_chrY_+_13252442_13252442	0.218226	Hmga1	ENSMUST00000178599.1|Gm21440|ENSMUSG00000093903.1|predicted gene, 21440
mm10_v2_chrX_-_134751331_134751424	0.217964	Hmga1	ENSMUST00000113194.1|Armcx6|ENSMUSG00000050394.8|armadillo repeat containing, X-linked 6 	ENSMUST00000052431.5|Armcx6|ENSMUSG00000050394.8|armadillo repeat containing, X-linked 6
mm10_v2_chr7_-_62420139_62420157	0.216839	Hmga1	ENSMUST00000094340.3|Mkrn3|ENSMUSG00000070527.3|makorin, ring finger protein, 3
mm10_v2_chr4_+_123282778_123282911	0.202616	Hmga1	ENSMUST00000106243.1|Pabpc4|ENSMUSG00000011257.13|poly(A) binding protein, cytoplasmic 4 	ENSMUST00000106241.1|Pabpc4|ENSMUSG00000011257.13|poly(A) binding protein, cytoplasmic 4 	ENSMUST00000080178.6|Pabpc4|ENSMUSG00000011257.13|poly(A) binding protein, cytoplasmic 4
mm10_v2_chrX_+_163911401_163911439	0.20126	Hmga1	ENSMUST00000140845.1|Ap1s2|ENSMUSG00000031367.9|adaptor-related protein complex 1, sigma 2 subunit
mm10_v2_chr19_+_55742242_55742468	0.200069	Hmga1	ENSMUST00000111652.1|Tcf7l2|ENSMUSG00000024985.12|transcription factor 7 like 2, T cell specific, HMG box 	ENSMUST00000111649.1|Tcf7l2|ENSMUSG00000024985.12|transcription factor 7 like 2, T cell specific, HMG box 	ENSMUST00000111651.1|Tcf7l2|ENSMUSG00000024985.12|transcription factor 7 like 2, T cell specific, HMG box 	ENSMUST00000111653.1|Tcf7l2|ENSMUSG00000024985.12|transcription factor 7 like 2, T cell specific, HMG box 	ENSMUST00000111656.1|Tcf7l2|ENSMUSG00000024985.12|transcription factor 7 like 2, T cell specific, HMG box 	ENSMUST00000127233.1|Tcf7l2|ENSMUSG00000024985.12|transcription factor 7 like 2, T cell specific, HMG box 	ENSMUST00000153888.1|Tcf7l2|ENSMUSG00000024985.12|transcription factor 7 like 2, T cell specific, HMG box
mm10_v2_chr12_+_98771018_98771041	0.199249	Hmga1	ENSMUST00000021399.7|Zc3h14|ENSMUSG00000021012.9|zinc finger CCCH type containing 14
mm10_v2_chrX_+_75095854_75095922	0.193841	Hmga1	ENSMUST00000033776.8|Dkc1|ENSMUSG00000031403.8|dyskeratosis congenita 1, dyskerin
mm10_v2_chr6_-_13871477_13871518	0.191992	Hmga1	ENSMUST00000139231.1|2610001J05Rik|ENSMUSG00000052419.6|RIKEN cDNA 2610001J05 gene
mm10_v2_chr6_-_102464667_102464667	0.188849	Hmga1	ENSMUST00000032159.6|Cntn3|ENSMUSG00000030075.8|contactin 3
mm10_v2_chr15_-_100424208_100424219	0.182735	Hmga1	ENSMUST00000154331.1|Slc11a2|ENSMUSG00000023030.10|solute carrier family 11 (proton-coupled divalent metal ion transporters), member 2
mm10_v2_chr7_-_38019505_38019552	0.18029	Hmga1	ENSMUST00000085513.4|Uri1|ENSMUSG00000030421.8|URI1, prefoldin-like chaperone
mm10_v2_chr6_+_91684061_91684132	0.179383	Hmga1	ENSMUST00000032185.7|Slc6a6|ENSMUSG00000030096.7|solute carrier family 6 (neurotransmitter transporter, taurine), member 6
mm10_v2_chr3_-_108536466_108536536	0.176803	Hmga1	ENSMUST00000048012.6|5330417C22Rik|ENSMUSG00000040412.10|RIKEN cDNA 5330417C22 gene 	ENSMUST00000106626.2|5330417C22Rik|ENSMUSG00000040412.10|RIKEN cDNA 5330417C22 gene 	ENSMUST00000106625.3|5330417C22Rik|ENSMUSG00000040412.10|RIKEN cDNA 5330417C22 gene
mm10_v2_chr10_-_34207551_34207551	0.175412	Hmga1	ENSMUST00000048010.7|Dse|ENSMUSG00000039497.7|dermatan sulfate epimerase
mm10_v2_chr2_-_140671440_140671458	0.175187	Hmga1	ENSMUST00000099301.1|Flrt3|ENSMUSG00000079021.1|fibronectin leucine rich transmembrane protein 3
mm10_v2_chr14_+_74640840_74640887	0.170531	Hmga1	ENSMUST00000036653.3|Htr2a|ENSMUSG00000034997.4|5-hydroxytryptamine (serotonin) receptor 2A
mm10_v2_chr3_-_121171678_121171717	0.169881	Hmga1	ENSMUST00000170781.1|Rwdd3|ENSMUSG00000028133.11|RWD domain containing 3 	ENSMUST00000039761.5|Rwdd3|ENSMUSG00000028133.11|RWD domain containing 3 	ENSMUST00000106467.1|Rwdd3|ENSMUSG00000028133.11|RWD domain containing 3 	ENSMUST00000106466.3|Rwdd3|ENSMUSG00000028133.11|RWD domain containing 3 	ENSMUST00000164925.2|Rwdd3|ENSMUSG00000028133.11|RWD domain containing 3
mm10_v2_chr8_-_36732897_36733054	0.16656	Hmga1	ENSMUST00000098826.3|Dlc1|ENSMUSG00000031523.10|deleted in liver cancer 1
mm10_v2_chr15_-_103215285_103215366	0.165241	Hmga1	ENSMUST00000122182.1|Cbx5|ENSMUSG00000009575.8|chromobox 5 	ENSMUST00000108813.3|Cbx5|ENSMUSG00000009575.8|chromobox 5 	ENSMUST00000127191.1|Cbx5|ENSMUSG00000009575.8|chromobox 5
mm10_v2_chr11_+_110968056_110968070	0.164436	Hmga1	ENSMUST00000125692.1|Kcnj16|ENSMUSG00000051497.9|potassium inwardly-rectifying channel, subfamily J, member 16
mm10_v2_chr3_+_85574109_85574148	0.163698	Hmga1	ENSMUST00000127348.1|Pet112|ENSMUSG00000028085.6|PET112 homolog (S. cerevisiae) 	ENSMUST00000107672.1|Pet112|ENSMUSG00000028085.6|PET112 homolog (S. cerevisiae) 	ENSMUST00000107674.1|Pet112|ENSMUSG00000028085.6|PET112 homolog (S. cerevisiae)
mm10_v2_chr11_+_52232009_52232041	0.159193	Hmga1	ENSMUST00000037324.5|Skp1a|ENSMUSG00000036309.8|S-phase kinase-associated protein 1A 	ENSMUST00000166537.1|Skp1a|ENSMUSG00000036309.8|S-phase kinase-associated protein 1A
mm10_v2_chr11_+_101582236_101582312	0.158859	Hmga1	ENSMUST00000039581.7|Tmem106a|ENSMUSG00000034947.7|transmembrane protein 106A 	ENSMUST00000100403.2|Tmem106a|ENSMUSG00000034947.7|transmembrane protein 106A 	ENSMUST00000107194.1|Tmem106a|ENSMUSG00000034947.7|transmembrane protein 106A 	ENSMUST00000128614.1|Tmem106a|ENSMUSG00000034947.7|transmembrane protein 106A
mm10_v2_chr6_+_125192154_125192170	0.152174	Hmga1	ENSMUST00000032485.5|Mrpl51|ENSMUSG00000030335.5|mitochondrial ribosomal protein L51
mm10_v2_chr2_-_73660401_73660410	0.149973	Hmga1	ENSMUST00000102677.4|Chn1|ENSMUSG00000056486.11|chimerin (chimaerin) 1
mm10_v2_chrM_+_3906_3926	0.149784	Hmga1	ENSMUST00000082396.1|mt-Nd2|ENSMUSG00000064345.1|mitochondrially encoded NADH dehydrogenase 2
mm10_v2_chr13_+_21735055_21735070	0.148778	Hmga1	ENSMUST00000087714.4|Hist1h4j|ENSMUSG00000067455.4|histone cluster 1, H4j
mm10_v2_chr3_-_151762906_151762906	0.147946	Hmga1	ENSMUST00000046739.4|Ifi44l|ENSMUSG00000039146.4|interferon-induced protein 44 like
mm10_v2_chr1_-_93305850_93305915	0.139385	Hmga1	ENSMUST00000112944.1|Mterfd2|ENSMUSG00000026273.7|MTERF domain containing 2 	ENSMUST00000112942.1|Mterfd2|ENSMUSG00000026273.7|MTERF domain containing 2 	ENSMUST00000027492.7|Mterfd2|ENSMUSG00000026273.7|MTERF domain containing 2
mm10_v2_chr8_+_36993551_36993611	0.132814	Hmga1	ENSMUST00000098825.3|AI429214|ENSMUSG00000074384.3|expressed sequence AI429214
mm10_v2_chr6_-_99632376_99632376	0.132793	Hmga1	ENSMUST00000176255.1|Gm20696|ENSMUSG00000030068.3|predicted gene 20696
mm10_v2_chr3_-_120886691_120886746	0.132548	Hmga1	ENSMUST00000182099.1|6530403H02Rik|ENSMUSG00000098097.1|RIKEN cDNA 6530403H02 gene 	ENSMUST00000183168.1|6530403H02Rik|ENSMUSG00000098097.1|RIKEN cDNA 6530403H02 gene 	ENSMUST00000183276.1|6530403H02Rik|ENSMUSG00000098097.1|RIKEN cDNA 6530403H02 gene 	ENSMUST00000182124.1|6530403H02Rik|ENSMUSG00000098097.1|RIKEN cDNA 6530403H02 gene
mm10_v2_chr18_+_84088077_84088178	0.128902	Hmga1	ENSMUST00000060223.2|Zadh2|ENSMUSG00000049090.2|zinc binding alcohol dehydrogenase, domain containing 2
mm10_v2_chr3_+_19957037_19957073	0.127402	Hmga1	ENSMUST00000091309.5|Cp|ENSMUSG00000003617.10|ceruloplasmin 	ENSMUST00000108329.1|Cp|ENSMUSG00000003617.10|ceruloplasmin 	ENSMUST00000003714.6|Cp|ENSMUSG00000003617.10|ceruloplasmin
mm10_v2_chr3_+_52268337_52268388	0.126218	Hmga1	ENSMUST00000053764.5|Foxo1|ENSMUSG00000044167.5|forkhead box O1
mm10_v2_chr3_-_88772578_88772601	0.125344	Hmga1	ENSMUST00000090945.4|Syt11|ENSMUSG00000068923.8|synaptotagmin XI
mm10_v2_chr13_-_23622502_23622563	0.125256	Hmga1	ENSMUST00000062045.2|Hist1h1e|ENSMUSG00000051627.2|histone cluster 1, H1e
mm10_v2_chr13_+_5861489_5861501	0.125194	Hmga1	ENSMUST00000000080.6|Klf6|ENSMUSG00000000078.6|Kruppel-like factor 6
mm10_v2_chrX_+_155262443_155262481	0.123404	Hmga1	ENSMUST00000026324.9|Acot9|ENSMUSG00000025287.9|acyl-CoA thioesterase 9
mm10_v2_chr11_-_120348475_120348508	0.12075	Hmga1	ENSMUST00000062147.7|Actg1|ENSMUSG00000062825.9|actin, gamma, cytoplasmic 1 	ENSMUST00000128055.1|Actg1|ENSMUSG00000062825.9|actin, gamma, cytoplasmic 1
mm10_v2_chr10_+_127420867_127420916	0.119367	Hmga1	ENSMUST00000064793.6|R3hdm2|ENSMUSG00000025404.9|R3H domain containing 2
mm10_v2_chr11_-_46052311_46052311	0.116515	Hmga1	ENSMUST00000093169.2|Gm12166|ENSMUSG00000069899.3|predicted gene 12166
mm10_v2_chr18_-_64516547_64516565	0.11549	Hmga1	ENSMUST00000025483.9|Nars|ENSMUSG00000024587.9|asparaginyl-tRNA synthetase
mm10_v2_chr1_-_4496400_4496420	0.114086	Hmga1	ENSMUST00000027035.3|Sox17|ENSMUSG00000025902.7|SRY-box containing gene 17
mm10_v2_chr8_+_45658273_45658298	0.112446	Hmga1	ENSMUST00000153798.1|Sorbs2|ENSMUSG00000031626.10|sorbin and SH3 domain containing 2
mm10_v2_chr12_+_72441852_72441866	0.110126	Hmga1	ENSMUST00000162159.1|Lrrc9|ENSMUSG00000021090.9|leucine rich repeat containing 9
mm10_v2_chr1_-_155417283_155417323	0.106618	Hmga1	ENSMUST00000027741.5|Xpr1|ENSMUSG00000026469.8|xenotropic and polytropic retrovirus receptor 1
mm10_v2_chr11_-_120348513_120348559	0.104157	Hmga1	ENSMUST00000071555.6|Actg1|ENSMUSG00000062825.9|actin, gamma, cytoplasmic 1
mm10_v2_chr12_-_27160311_27160476	0.0940012	Hmga1	ENSMUST00000182473.1|Gm9866|ENSMUSG00000094002.2|predicted gene 9866 	ENSMUST00000177636.1|Gm9866|ENSMUSG00000094002.2|predicted gene 9866 	ENSMUST00000183238.1|Gm9866|ENSMUSG00000094002.2|predicted gene 9866
mm10_v2_chr5_+_121777929_121777929	0.0931548	Hmga1	ENSMUST00000160821.1|Atxn2|ENSMUSG00000042605.9|ataxin 2
mm10_v2_chr5_-_66514815_66514837	0.0922674	Hmga1	ENSMUST00000161879.1|Apbb2|ENSMUSG00000029207.10|amyloid beta (A4) precursor protein-binding, family B, member 2 	ENSMUST00000159357.1|Apbb2|ENSMUSG00000029207.10|amyloid beta (A4) precursor protein-binding, family B, member 2
mm10_v2_chr12_+_110485710_110485755	0.0886469	Hmga1	ENSMUST00000084985.3|Ppp2r5c|ENSMUSG00000017843.7|protein phosphatase 2, regulatory subunit B (B56), gamma isoform 	ENSMUST00000109832.1|Ppp2r5c|ENSMUSG00000017843.7|protein phosphatase 2, regulatory subunit B (B56), gamma isoform
mm10_v2_chr12_+_55089202_55089202	0.0884649	Hmga1	ENSMUST00000021407.10|Srp54a|ENSMUSG00000073079.5|signal recognition particle 54A
mm10_v2_chr3_+_95588928_95588953	0.0861435	Hmga1	ENSMUST00000177390.1|Golph3l|ENSMUSG00000046519.9|golgi phosphoprotein 3-like 	ENSMUST00000098861.4|Golph3l|ENSMUSG00000046519.9|golgi phosphoprotein 3-like 	ENSMUST00000060323.5|Golph3l|ENSMUSG00000046519.9|golgi phosphoprotein 3-like
mm10_v2_chrM_+_10167_10167	0.085931	Hmga1	ENSMUST00000082414.1|mt-Nd4|ENSMUSG00000064363.1|mitochondrially encoded NADH dehydrogenase 4
mm10_v2_chr5_+_130187158_130187166	0.0834335	Hmga1	ENSMUST00000119027.1|Rabgef1|ENSMUSG00000025340.8|RAB guanine nucleotide exchange factor (GEF) 1 	ENSMUST00000026390.7|Rabgef1|ENSMUSG00000025340.8|RAB guanine nucleotide exchange factor (GEF) 1
mm10_v2_chr3_+_95588990_95589009	0.0819267	Hmga1	ENSMUST00000177399.1|Golph3l|ENSMUSG00000046519.9|golgi phosphoprotein 3-like
mm10_v2_chr18_-_34579072_34579130	0.0794491	Hmga1	ENSMUST00000079287.5|Nme5|ENSMUSG00000035984.8|NME/NM23 family member 5
mm10_v2_chr4_+_49059256_49059330	0.0782389	Hmga1	ENSMUST00000076670.2|E130309F12Rik|ENSMUSG00000063446.4|RIKEN cDNA E130309F12 gene
mm10_v2_chr1_+_19208914_19208967	0.0763954	Hmga1	ENSMUST00000027059.4|Tfap2b|ENSMUSG00000025927.7|transcription factor AP-2 beta
mm10_v2_chr10_+_63243785_63243846	0.0740056	Hmga1	ENSMUST00000020258.8|Herc4|ENSMUSG00000020064.8|hect domain and RLD 4
mm10_v2_chr15_-_50882806_50882822	0.0709945	Hmga1	ENSMUST00000184885.1|Trps1|ENSMUSG00000038679.10|trichorhinophalangeal syndrome I (human)
mm10_v2_chr16_-_29541483_29541597	0.0677102	Hmga1	ENSMUST00000057018.8|Atp13a4|ENSMUSG00000038094.9|ATPase type 13A4 	ENSMUST00000182627.1|Atp13a4|ENSMUSG00000038094.9|ATPase type 13A4
mm10_v2_chr13_+_23738804_23738809	0.0635971	Hmga1	ENSMUST00000040914.1|Hist1h1c|ENSMUSG00000036181.1|histone cluster 1, H1c
mm10_v2_chr2_-_86347764_86347764	0.0630197	Hmga1	ENSMUST00000099894.2|Olfr1055|ENSMUSG00000075189.2|olfactory receptor 1055
mm10_v2_chr17_+_32685610_32685627	0.0629204	Hmga1	ENSMUST00000168171.1|Cyp4f15|ENSMUSG00000073424.3|cytochrome P450, family 4, subfamily f, polypeptide 15
mm10_v2_chr18_-_43059418_43059471	0.0623497	Hmga1	ENSMUST00000025377.7|Ppp2r2b|ENSMUSG00000024500.12|protein phosphatase 2 (formerly 2A), regulatory subunit B (PR 52), beta isoform
mm10_v2_chr19_-_12765447_12765632	0.0595934	Hmga1	ENSMUST00000112933.1|Cntf|ENSMUSG00000079415.2|ciliary neurotrophic factor
mm10_v2_chr10_-_7956223_7956271	0.0572812	Hmga1	ENSMUST00000146444.1|Tab2|ENSMUSG00000015755.10|TGF-beta activated kinase 1/MAP3K7 binding protein 2
mm10_v2_chr16_+_58670208_58670246	0.055877	Hmga1	ENSMUST00000060077.5|Cpox|ENSMUSG00000022742.5|coproporphyrinogen oxidase
mm10_v2_chr11_+_67966442_67966497	0.0549869	Hmga1	ENSMUST00000021286.4|Stx8|ENSMUSG00000020903.7|syntaxin 8 	ENSMUST00000108675.1|Stx8|ENSMUSG00000020903.7|syntaxin 8
mm10_v2_chr5_+_21372642_21372714	0.0528723	Hmga1	ENSMUST00000035799.5|Fgl2|ENSMUSG00000039899.5|fibrinogen-like protein 2
mm10_v2_chr2_-_73660351_73660397	0.0506872	Hmga1	ENSMUST00000154258.1|Chn1|ENSMUSG00000056486.11|chimerin (chimaerin) 1
mm10_v2_chr1_-_150465563_150465604	0.0496854	Hmga1	ENSMUST00000164600.1|Prg4|ENSMUSG00000006014.10|proteoglycan 4 (megakaryocyte stimulating factor, articular superficial zone protein) 	ENSMUST00000111902.2|Prg4|ENSMUSG00000006014.10|proteoglycan 4 (megakaryocyte stimulating factor, articular superficial zone protein) 	ENSMUST00000111901.2|Prg4|ENSMUSG00000006014.10|proteoglycan 4 (megakaryocyte stimulating factor, articular superficial zone protein) 	ENSMUST00000006171.9|Prg4|ENSMUSG00000006014.10|proteoglycan 4 (megakaryocyte stimulating factor, articular superficial zone protein)
mm10_v2_chr9_+_120929216_120929251	0.0459313	Hmga1	ENSMUST00000130466.1|Ctnnb1|ENSMUSG00000006932.10|catenin (cadherin associated protein), beta 1
mm10_v2_chr3_+_76593550_76593550	0.0436832	Hmga1	ENSMUST00000162471.1|Fstl5|ENSMUSG00000034098.8|follistatin-like 5
mm10_v2_chr16_+_10835046_10835084	0.042674	Hmga1	ENSMUST00000037913.8|Rmi2|ENSMUSG00000037991.9|RMI2, RecQ mediated genome instability 2, homolog (S. cerevisiae)
mm10_v2_chr9_+_43259879_43259879	0.0413714	Hmga1	ENSMUST00000179013.1|D630033O11Rik|ENSMUSG00000095385.1|RIKEN cDNA D630033O11 gene
mm10_v2_chr7_-_80901220_80901269	0.0409072	Hmga1	ENSMUST00000146402.1|Wdr73|ENSMUSG00000025722.10|WD repeat domain 73 	ENSMUST00000026816.8|Wdr73|ENSMUSG00000025722.10|WD repeat domain 73
mm10_v2_chr12_-_102423741_102423774	0.0403889	Hmga1	ENSMUST00000110020.1|Lgmn|ENSMUSG00000021190.8|legumain
mm10_v2_chrX_-_150812715_150812805	0.0295668	Hmga1	ENSMUST00000112697.3|Maged2|ENSMUSG00000025268.9|melanoma antigen, family D, 2
mm10_v2_chr17_-_56074542_56074571	0.0257823	Hmga1	ENSMUST00000139371.1|Ubxn6|ENSMUSG00000019578.5|UBX domain protein 6
mm10_v2_chr8_+_125995102_125995185	0.0247788	Hmga1	ENSMUST00000046765.8|Kcnk1|ENSMUSG00000033998.8|potassium channel, subfamily K, member 1
mm10_v2_chr10_+_127266256_127266292	0.0221733	Hmga1	ENSMUST00000026479.9|Dctn2|ENSMUSG00000025410.9|dynactin 2
mm10_v2_chr10_-_39122277_39122314	0.0217993	Hmga1	ENSMUST00000136546.1|Fam229b|ENSMUSG00000051736.2|family with sequence similarity 229, member B
mm10_v2_chr7_+_101663705_101663734	0.021007	Hmga1	ENSMUST00000106998.1|Clpb|ENSMUSG00000001829.10|ClpB caseinolytic peptidase B
mm10_v2_chr7_-_83550258_83550258	0.019978	Hmga1	ENSMUST00000177929.1|Gm10610|ENSMUSG00000094841.1|predicted gene 10610
mm10_v2_chr13_-_60897439_60897455	0.0136163	Hmga1	ENSMUST00000171347.1|Ctla2b|ENSMUSG00000074874.3|cytotoxic T lymphocyte-associated protein 2 beta 	ENSMUST00000021884.8|Ctla2b|ENSMUSG00000074874.3|cytotoxic T lymphocyte-associated protein 2 beta
mm10_v2_chr9_+_55326913_55326958	0.0134028	Hmga1	ENSMUST00000085754.3|AI118078|ENSMUSG00000032313.5|expressed sequence AI118078 	ENSMUST00000034862.4|AI118078|ENSMUSG00000032313.5|expressed sequence AI118078
mm10_v2_chr17_-_56074932_56075036	0.00551931	Hmga1	ENSMUST00000019722.5|Ubxn6|ENSMUSG00000019578.5|UBX domain protein 6
mm10_v2_chr19_-_12796108_12796146	0.00277264	Hmga1	ENSMUST00000038627.8|Zfp91|ENSMUSG00000024695.9|zinc finger protein 91
mm10_v2_chr19_-_38224096_38224183	0.000797625	Hmga1	ENSMUST00000067167.5|Fra10ac1|ENSMUSG00000054237.5|FRA10AC1 homolog (human)
mm10_v2_chr2_-_36136773_36136845	1.22776e-05	Hmga1	ENSMUST00000028251.3|Rbm18|ENSMUSG00000026889.6|RNA binding motif protein 18
