mm10_v2_chr6_-_23248264_23248390	3.80869	Homez	ENSMUST00000031709.5|Fezf1|ENSMUSG00000029697.5|Fez family zinc finger 1
mm10_v2_chr16_-_26989974_26989974	2.67121	Homez	ENSMUST00000089832.4|Gmnc|ENSMUSG00000068428.6|geminin coiled-coil domain containing
mm10_v2_chr17_+_87635974_87635990	1.61266	Homez	ENSMUST00000053577.8|Epcam|ENSMUSG00000045394.8|epithelial cell adhesion molecule
mm10_v2_chr18_+_86711059_86711110	1.54712	Homez	ENSMUST00000068423.3|Cbln2|ENSMUSG00000024647.8|cerebellin 2 precursor protein
mm10_v2_chr18_+_50030977_50031043	1.38362	Homez	ENSMUST00000145726.1|Tnfaip8|ENSMUSG00000062210.7|tumor necrosis factor, alpha-induced protein 8 	ENSMUST00000128377.1|Tnfaip8|ENSMUSG00000062210.7|tumor necrosis factor, alpha-induced protein 8
mm10_v2_chr9_+_91368811_91368828	1.36151	Homez	ENSMUST00000173054.1|Zic4|ENSMUSG00000036972.8|zinc finger protein of the cerebellum 4
mm10_v2_chr18_-_62756275_62756347	1.18803	Homez	ENSMUST00000067450.1|2700046A07Rik|ENSMUSG00000041789.6|RIKEN cDNA 2700046A07 gene 	ENSMUST00000048109.5|2700046A07Rik|ENSMUSG00000041789.6|RIKEN cDNA 2700046A07 gene
mm10_v2_chr9_+_91368970_91369073	1.17763	Homez	ENSMUST00000172646.1|Zic4|ENSMUSG00000036972.8|zinc finger protein of the cerebellum 4
mm10_v2_chr17_+_26542760_26542760	1.13699	Homez	ENSMUST00000090257.4|Gm8225|ENSMUSG00000068604.4|predicted gene 8225
mm10_v2_chr11_+_101627942_101627972	1.06879	Homez	ENSMUST00000010506.3|Rdm1|ENSMUSG00000010362.3|RAD52 motif 1
mm10_v2_chr4_+_44300876_44300936	1.01417	Homez	ENSMUST00000045607.5|Melk|ENSMUSG00000035683.7|maternal embryonic leucine zipper kinase
mm10_v2_chr4_-_117178726_117178754	1.01175	Homez	ENSMUST00000153953.1|Kif2c|ENSMUSG00000028678.7|kinesin family member 2C 	ENSMUST00000106436.1|Kif2c|ENSMUSG00000028678.7|kinesin family member 2C
mm10_v2_chr1_+_169969409_169969454	0.943723	Homez	ENSMUST00000180638.1|3110045C21Rik|ENSMUSG00000097503.1|RIKEN cDNA 3110045C21 gene
mm10_v2_chr7_-_62464505_62464548	0.934637	Homez	ENSMUST00000094339.2|Peg12|ENSMUSG00000070526.2|paternally expressed 12
mm10_v2_chr8_-_116921408_116921455	0.895632	Homez	ENSMUST00000078589.6|Cmc2|ENSMUSG00000014633.9|COX assembly mitochondrial protein 2 	ENSMUST00000148235.1|Cmc2|ENSMUSG00000014633.9|COX assembly mitochondrial protein 2
mm10_v2_chr5_-_87490869_87490875	0.890077	Homez	ENSMUST00000147854.1|Ugt2a1|ENSMUSG00000029268.8|UDP glucuronosyltransferase 2 family, polypeptide A1
mm10_v2_chr7_-_30664986_30664999	0.888538	Homez	ENSMUST00000019697.8|Haus5|ENSMUSG00000078762.4|HAUS augmin-like complex, subunit 5
mm10_v2_chrX_+_20059535_20059574	0.887232	Homez	ENSMUST00000044138.7|Chst7|ENSMUSG00000037347.7|carbohydrate (N-acetylglucosamino) sulfotransferase 7
mm10_v2_chr8_-_72305276_72305276	0.88558	Homez	ENSMUST00000075602.6|Gm10282|ENSMUSG00000070713.4|predicted pseudogene 10282
mm10_v2_chr7_+_67647405_67647456	0.882222	Homez	ENSMUST00000032774.8|Ttc23|ENSMUSG00000030555.9|tetratricopeptide repeat domain 23 	ENSMUST00000107471.1|Ttc23|ENSMUSG00000030555.9|tetratricopeptide repeat domain 23
mm10_v2_chr8_-_116921365_116921392	0.878245	Homez	ENSMUST00000128304.1|Cmc2|ENSMUSG00000014633.9|COX assembly mitochondrial protein 2
mm10_v2_chr13_-_23698454_23698460	0.86831	Homez	ENSMUST00000102967.1|Hist1h4c|ENSMUSG00000060678.4|histone cluster 1, H4c
mm10_v2_chr8_-_4779513_4779591	0.864883	Homez	ENSMUST00000022945.7|Shcbp1|ENSMUSG00000022322.7|Shc SH2-domain binding protein 1
mm10_v2_chr11_+_75999912_75999946	0.82763	Homez	ENSMUST00000066408.5|1700016K19Rik|ENSMUSG00000053783.5|RIKEN cDNA 1700016K19 gene
mm10_v2_chr7_-_38227975_38228000	0.824427	Homez	ENSMUST00000098513.4|Plekhf1|ENSMUSG00000074170.4|pleckstrin homology domain containing, family F (with FYVE domain) member 1
mm10_v2_chr3_-_79841729_79841729	0.822189	Homez	ENSMUST00000168038.1|Tmem144|ENSMUSG00000027956.5|transmembrane protein 144
mm10_v2_chr8_-_84065137_84065137	0.816117	Homez	ENSMUST00000098592.2|Gm10643|ENSMUSG00000074215.2|predicted gene 10643
mm10_v2_chr2_+_71389239_71389278	0.813012	Homez	ENSMUST00000028408.2|Hat1|ENSMUSG00000027018.5|histone aminotransferase 1
mm10_v2_chr5_+_21785253_21785301	0.812098	Homez	ENSMUST00000030769.5|Psmc2|ENSMUSG00000028932.7|proteasome (prosome, macropain) 26S subunit, ATPase 2
mm10_v2_chr3_+_90220783_90220830	0.803851	Homez	ENSMUST00000065418.6|Rab13|ENSMUSG00000027935.8|RAB13, member RAS oncogene family
mm10_v2_chr12_-_69184056_69184083	0.785625	Homez	ENSMUST00000054544.6|Rpl36al|ENSMUSG00000049751.6|ribosomal protein L36A-like
mm10_v2_chr9_+_87022014_87022179	0.782748	Homez	ENSMUST00000168529.2|Cyb5r4|ENSMUSG00000032872.10|cytochrome b5 reductase 4 	ENSMUST00000174724.1|Cyb5r4|ENSMUSG00000032872.10|cytochrome b5 reductase 4 	ENSMUST00000173126.1|Cyb5r4|ENSMUSG00000032872.10|cytochrome b5 reductase 4
mm10_v2_chr17_+_24426676_24426701	0.782657	Homez	ENSMUST00000024946.5|Eci1|ENSMUSG00000024132.5|enoyl-Coenzyme A delta isomerase 1
mm10_v2_chr5_-_8422695_8422727	0.773759	Homez	ENSMUST00000171808.1|Dbf4|ENSMUSG00000002297.9|DBF4 homolog (S. cerevisiae)
mm10_v2_chrX_+_36795642_36795653	0.758806	Homez	ENSMUST00000016463.3|Slc25a5|ENSMUSG00000016319.3|solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 5
mm10_v2_chr5_-_149051300_149051390	0.758185	Homez	ENSMUST00000110505.1|Hmgb1|ENSMUSG00000066551.6|high mobility group box 1
mm10_v2_chr3_+_85915722_85915722	0.74915	Homez	ENSMUST00000054148.7|Gm9790|ENSMUSG00000044330.7|predicted gene 9790
mm10_v2_chr5_-_8422582_8422693	0.733989	Homez	ENSMUST00000168500.1|Dbf4|ENSMUSG00000002297.9|DBF4 homolog (S. cerevisiae) 	ENSMUST00000002368.9|Dbf4|ENSMUSG00000002297.9|DBF4 homolog (S. cerevisiae)
mm10_v2_chr1_-_136230289_136230332	0.725009	Homez	ENSMUST00000150163.1|5730559C18Rik|ENSMUSG00000041605.10|RIKEN cDNA 5730559C18 gene 	ENSMUST00000144464.1|5730559C18Rik|ENSMUSG00000041605.10|RIKEN cDNA 5730559C18 gene
mm10_v2_chr4_-_116994354_116994372	0.719346	Homez	ENSMUST00000130273.1|Urod|ENSMUSG00000028684.8|uroporphyrinogen decarboxylase
mm10_v2_chr8_+_116921735_116921752	0.715333	Homez	ENSMUST00000034205.4|Cenpn|ENSMUSG00000031756.4|centromere protein N
mm10_v2_chr4_-_134767940_134768024	0.69679	Homez	ENSMUST00000037828.6|Ldlrap1|ENSMUSG00000037295.6|low density lipoprotein receptor adaptor protein 1
mm10_v2_chr2_-_174464063_174464105	0.680107	Homez	ENSMUST00000016396.7|Atp5e|ENSMUSG00000016252.7|ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit
mm10_v2_chr8_+_70673364_70673432	0.676292	Homez	ENSMUST00000146972.1|Lsm4|ENSMUSG00000031848.8|LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae)
mm10_v2_chr11_-_94242701_94242729	0.669353	Homez	ENSMUST00000061469.3|Wfikkn2|ENSMUSG00000044177.4|WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 2
mm10_v2_chr4_+_115057683_115057811	0.649597	Homez	ENSMUST00000161601.1|Tal1|ENSMUSG00000028717.6|T cell acute lymphocytic leukemia 1
mm10_v2_chr6_+_120463197_120463253	0.626876	Homez	ENSMUST00000002976.3|Il17ra|ENSMUSG00000002897.3|interleukin 17 receptor A
mm10_v2_chr4_+_63215402_63215435	0.621284	Homez	ENSMUST00000036300.6|Col27a1|ENSMUSG00000045672.9|collagen, type XXVII, alpha 1
mm10_v2_chr1_-_72212249_72212307	0.620632	Homez	ENSMUST00000048860.7|Mreg|ENSMUSG00000039395.7|melanoregulin
mm10_v2_chr4_+_115057410_115057438	0.610461	Homez	ENSMUST00000136946.1|Tal1|ENSMUSG00000028717.6|T cell acute lymphocytic leukemia 1
mm10_v2_chr10_+_111125851_111125851	0.609459	Homez	ENSMUST00000171120.1|Gm5428|ENSMUSG00000091086.1|predicted gene 5428
mm10_v2_chr4_-_116994374_116994413	0.608906	Homez	ENSMUST00000030446.8|Urod|ENSMUSG00000028684.8|uroporphyrinogen decarboxylase
mm10_v2_chr19_-_36919606_36919622	0.600285	Homez	ENSMUST00000057337.7|Fgfbp3|ENSMUSG00000047632.10|fibroblast growth factor binding protein 3
mm10_v2_chrM_+_7759_7927	0.582481	Homez	ENSMUST00000082407.1|mt-Atp8|ENSMUSG00000064356.3|mitochondrially encoded ATP synthase 8 	ENSMUST00000082408.1|mt-Atp6|ENSMUSG00000064357.1|mitochondrially encoded ATP synthase 6
mm10_v2_chr12_-_69183986_69184051	0.580088	Homez	ENSMUST00000110620.1|Rpl36al|ENSMUSG00000049751.6|ribosomal protein L36A-like 	ENSMUST00000110619.1|Rpl36al|ENSMUSG00000049751.6|ribosomal protein L36A-like
mm10_v2_chr18_+_84088077_84088178	0.577182	Homez	ENSMUST00000060223.2|Zadh2|ENSMUSG00000049090.2|zinc binding alcohol dehydrogenase, domain containing 2
mm10_v2_chr11_+_116280939_116280939	0.57417	Homez	ENSMUST00000055872.2|Galr2|ENSMUSG00000020793.5|galanin receptor 2
mm10_v2_chr11_-_48826500_48826500	0.574054	Homez	ENSMUST00000161192.2|Gm12184|ENSMUSG00000078154.2|predicted gene 12184
mm10_v2_chrX_-_49788204_49788243	0.572269	Homez	ENSMUST00000114893.1|Igsf1|ENSMUSG00000031111.10|immunoglobulin superfamily, member 1
mm10_v2_chrX_+_139217166_139217190	0.569269	Homez	ENSMUST00000166444.1|Mum1l1|ENSMUSG00000042515.7|melanoma associated antigen (mutated) 1-like 1 	ENSMUST00000170671.1|Mum1l1|ENSMUSG00000042515.7|melanoma associated antigen (mutated) 1-like 1 	ENSMUST00000113041.2|Mum1l1|ENSMUSG00000042515.7|melanoma associated antigen (mutated) 1-like 1 	ENSMUST00000113042.2|Mum1l1|ENSMUSG00000042515.7|melanoma associated antigen (mutated) 1-like 1
mm10_v2_chr5_-_21785115_21785251	0.565958	Homez	ENSMUST00000115193.1|Dnajc2|ENSMUSG00000029014.8|DnaJ (Hsp40) homolog, subfamily C, member 2 	ENSMUST00000115192.1|Dnajc2|ENSMUSG00000029014.8|DnaJ (Hsp40) homolog, subfamily C, member 2 	ENSMUST00000115195.1|Dnajc2|ENSMUSG00000029014.8|DnaJ (Hsp40) homolog, subfamily C, member 2 	ENSMUST00000030771.5|Dnajc2|ENSMUSG00000029014.8|DnaJ (Hsp40) homolog, subfamily C, member 2
mm10_v2_chr1_-_138619687_138619759	0.553238	Homez	ENSMUST00000027642.2|Nek7|ENSMUSG00000026393.4|NIMA (never in mitosis gene a)-related expressed kinase 7
mm10_v2_chr2_-_25332481_25332571	0.552999	Homez	ENSMUST00000180841.1|AA543186|ENSMUSG00000097345.1|expressed sequence AA543186
mm10_v2_chr12_-_80260356_80260371	0.546974	Homez	ENSMUST00000021554.8|Actn1|ENSMUSG00000015143.8|actinin, alpha 1
mm10_v2_chr9_-_36726374_36726658	0.542762	Homez	ENSMUST00000172702.2|Chek1|ENSMUSG00000032113.9|checkpoint kinase 1 	ENSMUST00000172742.1|Chek1|ENSMUSG00000032113.9|checkpoint kinase 1 	ENSMUST00000034625.5|Chek1|ENSMUSG00000032113.9|checkpoint kinase 1
mm10_v2_chr10_-_80039674_80039795	0.53508	Homez	ENSMUST00000004786.9|Polr2e|ENSMUSG00000004667.12|polymerase (RNA) II (DNA directed) polypeptide E
mm10_v2_chr8_+_70673198_70673267	0.53181	Homez	ENSMUST00000034311.8|Lsm4|ENSMUSG00000031848.8|LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae)
mm10_v2_chr5_-_135251209_135251242	0.528546	Homez	ENSMUST00000062572.2|Fzd9|ENSMUSG00000049551.2|frizzled homolog 9 (Drosophila)
mm10_v2_chr5_+_129846980_129847036	0.528108	Homez	ENSMUST00000171300.1|Sumf2|ENSMUSG00000025538.9|sulfatase modifying factor 2
mm10_v2_chr14_-_54653616_54653701	0.526029	Homez	ENSMUST00000126166.1|Acin1|ENSMUSG00000022185.12|apoptotic chromatin condensation inducer 1 	ENSMUST00000141453.1|Acin1|ENSMUSG00000022185.12|apoptotic chromatin condensation inducer 1 	ENSMUST00000150371.1|Acin1|ENSMUSG00000022185.12|apoptotic chromatin condensation inducer 1 	ENSMUST00000123875.1|Acin1|ENSMUSG00000022185.12|apoptotic chromatin condensation inducer 1 	ENSMUST00000022794.7|Acin1|ENSMUSG00000022185.12|apoptotic chromatin condensation inducer 1 	ENSMUST00000148754.3|Acin1|ENSMUSG00000022185.12|apoptotic chromatin condensation inducer 1
mm10_v2_chr10_-_63421739_63421739	0.524077	Homez	ENSMUST00000054760.4|Gm7075|ENSMUSG00000048185.4|predicted gene 7075
mm10_v2_chr7_+_140881898_140881968	0.524016	Homez	ENSMUST00000026560.7|Psmd13|ENSMUSG00000025487.8|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13
mm10_v2_chr1_+_87214286_87214369	0.523864	Homez	ENSMUST00000113231.3|Eif4e2|ENSMUSG00000026254.11|eukaryotic translation initiation factor 4E member 2
mm10_v2_chr1_-_163994767_163994808	0.521983	Homez	ENSMUST00000097493.3|BC055324|ENSMUSG00000041406.8|cDNA sequence BC055324 	ENSMUST00000045876.6|BC055324|ENSMUSG00000041406.8|cDNA sequence BC055324
mm10_v2_chr6_+_142413441_142413441	0.520296	Homez	ENSMUST00000088263.4|B230216G23Rik|ENSMUSG00000071112.5|RIKEN cDNA B230216G23 gene
mm10_v2_chr9_-_64172879_64172918	0.519876	Homez	ENSMUST00000176299.1|Zwilch|ENSMUSG00000032400.11|zwilch kinetochore protein 	ENSMUST00000130127.1|Zwilch|ENSMUSG00000032400.11|zwilch kinetochore protein 	ENSMUST00000176794.1|Zwilch|ENSMUSG00000032400.11|zwilch kinetochore protein 	ENSMUST00000177045.1|Zwilch|ENSMUSG00000032400.11|zwilch kinetochore protein
mm10_v2_chr1_-_20820213_20820286	0.519546	Homez	ENSMUST00000053266.9|Mcm3|ENSMUSG00000041859.9|minichromosome maintenance deficient 3 (S. cerevisiae)
mm10_v2_chr9_-_100486788_100486788	0.515272	Homez	ENSMUST00000098458.3|Il20rb|ENSMUSG00000044244.12|interleukin 20 receptor beta
mm10_v2_chr9_-_44251464_44251491	0.513655	Homez	ENSMUST00000034618.4|Pdzd3|ENSMUSG00000032105.4|PDZ domain containing 3
mm10_v2_chr8_+_85171322_85171322	0.513263	Homez	ENSMUST00000076896.5|Gm6531|ENSMUSG00000062687.5|predicted gene 6531
mm10_v2_chr13_-_85127514_85127514	0.503857	Homez	ENSMUST00000179230.1|Gm4076|ENSMUSG00000096449.1|predicted gene 4076
mm10_v2_chr2_-_127792467_127792505	0.500571	Homez	ENSMUST00000135091.1|1500011K16Rik|ENSMUSG00000051319.6|RIKEN cDNA 1500011K16 gene
mm10_v2_chr3_+_5218546_5218561	0.492817	Homez	ENSMUST00000026284.6|Zfhx4|ENSMUSG00000025255.12|zinc finger homeodomain 4
mm10_v2_chr6_+_142414012_142414012	0.483128	Homez	ENSMUST00000141548.1|B230216G23Rik|ENSMUSG00000071112.5|RIKEN cDNA B230216G23 gene
mm10_v2_chr19_-_30175414_30175436	0.480611	Homez	ENSMUST00000025778.7|Gldc|ENSMUSG00000024827.9|glycine decarboxylase
mm10_v2_chr3_-_138143352_138143396	0.474226	Homez	ENSMUST00000098580.2|Mttp|ENSMUSG00000028158.8|microsomal triglyceride transfer protein
mm10_v2_chr9_+_108339048_108339080	0.465999	Homez	ENSMUST00000082429.5|Gpx1|ENSMUSG00000063856.6|glutathione peroxidase 1
mm10_v2_chrX_-_157568983_157568991	0.463731	Homez	ENSMUST00000065806.4|Yy2|ENSMUSG00000091736.2|Yy2 transcription factor
mm10_v2_chr6_+_137754529_137754599	0.460389	Homez	ENSMUST00000087675.6|Dera|ENSMUSG00000030225.9|2-deoxyribose-5-phosphate aldolase homolog (C. elegans)
mm10_v2_chr10_+_128747850_128747895	0.456141	Homez	ENSMUST00000163377.2|Wibg|ENSMUSG00000064030.8|within bgcn homolog (Drosophila)
mm10_v2_chr13_+_21810428_21810465	0.454639	Homez	ENSMUST00000091745.5|Hist1h2ao|ENSMUSG00000094248.1|histone cluster 1, H2ao
mm10_v2_chr13_+_22043189_22043214	0.442557	Homez	ENSMUST00000110452.1|Hist1h2bj|ENSMUSG00000069300.3|histone cluster 1, H2bj
mm10_v2_chr12_-_54695885_54695897	0.43664	Homez	ENSMUST00000067272.8|Eapp|ENSMUSG00000054302.9|E2F-associated phosphoprotein
mm10_v2_chr19_+_47731743_47731768	0.432879	Homez	ENSMUST00000099353.4|Sfr1|ENSMUSG00000025066.9|SWI5 dependent recombination repair 1
mm10_v2_chrM_+_11734_11757	0.427054	Homez	ENSMUST00000082418.1|mt-Nd5|ENSMUSG00000064367.1|mitochondrially encoded NADH dehydrogenase 5
mm10_v2_chr15_+_79659196_79659267	0.424956	Homez	ENSMUST00000023064.7|Cby1|ENSMUSG00000022428.7|chibby homolog 1 (Drosophila)
mm10_v2_chr14_-_20393473_20393572	0.419947	Homez	ENSMUST00000061444.3|Mrps16|ENSMUSG00000049960.3|mitochondrial ribosomal protein S16
mm10_v2_chr11_-_106998483_106998491	0.404724	Homez	ENSMUST00000124541.1|Kpna2|ENSMUSG00000018362.8|karyopherin (importin) alpha 2
mm10_v2_chr10_+_63386550_63386576	0.400286	Homez	ENSMUST00000043317.5|Dnajc12|ENSMUSG00000036764.5|DnaJ (Hsp40) homolog, subfamily C, member 12
mm10_v2_chr3_+_51415986_51416044	0.39706	Homez	ENSMUST00000029303.7|Naa15|ENSMUSG00000063273.6|N(alpha)-acetyltransferase 15, NatA auxiliary subunit
mm10_v2_chr1_+_78657825_78657868	0.38743	Homez	ENSMUST00000035779.8|Acsl3|ENSMUSG00000032883.9|acyl-CoA synthetase long-chain family member 3
mm10_v2_chr12_+_55398775_55398894	0.383035	Homez	ENSMUST00000021412.8|Psma6|ENSMUSG00000021024.8|proteasome (prosome, macropain) subunit, alpha type 6
mm10_v2_chr8_-_107588392_107588482	0.379609	Homez	ENSMUST00000044106.4|Psmd7|ENSMUSG00000039067.4|proteasome (prosome, macropain) 26S subunit, non-ATPase, 7
mm10_v2_chr7_+_140882430_140882472	0.378716	Homez	ENSMUST00000164681.1|Psmd13|ENSMUSG00000025487.8|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13 	ENSMUST00000163610.1|Psmd13|ENSMUSG00000025487.8|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13
mm10_v2_chr6_-_136941887_136941911	0.378677	Homez	ENSMUST00000111891.1|Arhgdib|ENSMUSG00000030220.7|Rho, GDP dissociation inhibitor (GDI) beta
mm10_v2_chr12_-_54695813_54695828	0.371678	Homez	ENSMUST00000110713.3|Eapp|ENSMUSG00000054302.9|E2F-associated phosphoprotein
mm10_v2_chr13_+_90923122_90923170	0.369643	Homez	ENSMUST00000051955.7|Rps23|ENSMUSG00000049517.7|ribosomal protein S23
mm10_v2_chr3_+_138143429_138143477	0.364307	Homez	ENSMUST00000040321.6|Trmt10a|ENSMUSG00000004127.6|tRNA methyltransferase 10A
mm10_v2_chr2_-_77946331_77946373	0.363115	Homez	ENSMUST00000111821.2|Cwc22|ENSMUSG00000027014.8|CWC22 spliceosome-associated protein homolog (S. cerevisiae) 	ENSMUST00000111818.1|Cwc22|ENSMUSG00000027014.8|CWC22 spliceosome-associated protein homolog (S. cerevisiae)
mm10_v2_chr2_-_77946375_77946392	0.359887	Homez	ENSMUST00000065889.3|Cwc22|ENSMUSG00000027014.8|CWC22 spliceosome-associated protein homolog (S. cerevisiae)
mm10_v2_chr6_+_85587524_85587544	0.359727	Homez	ENSMUST00000072018.5|Alms1|ENSMUSG00000063810.5|Alstrom syndrome 1
mm10_v2_chr8_+_123102344_123102351	0.358022	Homez	ENSMUST00000000756.5|Rpl13|ENSMUSG00000000740.5|ribosomal protein L13
mm10_v2_chr6_-_55175019_55175043	0.352834	Homez	ENSMUST00000003569.5|Inmt|ENSMUSG00000003477.5|indolethylamine N-methyltransferase
mm10_v2_chr2_-_3419066_3419129	0.350862	Homez	ENSMUST00000115082.3|Meig1|ENSMUSG00000026650.9|meiosis expressed gene 1
mm10_v2_chr7_+_16738410_16738476	0.34825	Homez	ENSMUST00000086112.6|Ap2s1|ENSMUSG00000008036.10|adaptor-related protein complex 2, sigma 1 subunit
mm10_v2_chr3_-_130709419_130709451	0.34278	Homez	ENSMUST00000043937.7|Ostc|ENSMUSG00000041084.7|oligosaccharyltransferase complex subunit
mm10_v2_chrX_-_139714481_139714507	0.34171	Homez	ENSMUST00000183728.1|Gm15013|ENSMUSG00000098559.1|predicted gene 15013
mm10_v2_chr7_-_45466894_45466901	0.340199	Homez	ENSMUST00000033093.8|Bax|ENSMUSG00000003873.10|BCL2-associated X protein
mm10_v2_chr1_-_175979114_175979114	0.339681	Homez	ENSMUST00000104983.1|B020018G12Rik|ENSMUSG00000078184.1|RIKEN cDNA B020018G12 gene
mm10_v2_chr6_-_42645254_42645254	0.339358	Homez	ENSMUST00000031879.3|Fam115c|ENSMUSG00000029851.4|family with sequence similarity 115, member C
mm10_v2_chr4_+_152325831_152325876	0.336592	Homez	ENSMUST00000103191.4|Rpl22|ENSMUSG00000028936.9|ribosomal protein L22 	ENSMUST00000139685.1|Rpl22|ENSMUSG00000028936.9|ribosomal protein L22
mm10_v2_chr1_+_92906959_92907036	0.332785	Homez	ENSMUST00000060913.6|Dusp28|ENSMUSG00000047067.6|dual specificity phosphatase 28
mm10_v2_chr8_-_70506710_70506766	0.328317	Homez	ENSMUST00000136913.1|2810428I15Rik|ENSMUSG00000058833.5|RIKEN cDNA 2810428I15 gene 	ENSMUST00000075175.5|2810428I15Rik|ENSMUSG00000058833.5|RIKEN cDNA 2810428I15 gene
mm10_v2_chr1_+_78657874_78658038	0.328099	Homez	ENSMUST00000134566.1|Acsl3|ENSMUSG00000032883.9|acyl-CoA synthetase long-chain family member 3 	ENSMUST00000142704.1|Acsl3|ENSMUSG00000032883.9|acyl-CoA synthetase long-chain family member 3 	ENSMUST00000053760.5|Utp14b|ENSMUSG00000079470.2|UTP14, U3 small nucleolar ribonucleoprotein, homolog B (yeast)
mm10_v2_chr9_+_89199319_89199379	0.326153	Homez	ENSMUST00000138109.1|Mthfs|ENSMUSG00000066442.10|5, 10-methenyltetrahydrofolate synthetase
mm10_v2_chr16_-_91069142_91069159	0.323891	Homez	ENSMUST00000035689.1|4932438H23Rik|ENSMUSG00000039851.5|RIKEN cDNA 4932438H23 gene 	ENSMUST00000114076.1|4932438H23Rik|ENSMUSG00000039851.5|RIKEN cDNA 4932438H23 gene
mm10_v2_chr15_-_83464595_83464614	0.32386	Homez	ENSMUST00000171436.1|Pacsin2|ENSMUSG00000016664.8|protein kinase C and casein kinase substrate in neurons 2
mm10_v2_chr11_-_51650813_51650851	0.32221	Homez	ENSMUST00000142721.1|N4bp3|ENSMUSG00000001053.9|NEDD4 binding protein 3 	ENSMUST00000156835.1|N4bp3|ENSMUSG00000001053.9|NEDD4 binding protein 3 	ENSMUST00000001080.9|N4bp3|ENSMUSG00000001053.9|NEDD4 binding protein 3
mm10_v2_chr6_-_56362356_56362519	0.321715	Homez	ENSMUST00000044505.7|Pde1c|ENSMUSG00000004347.10|phosphodiesterase 1C 	ENSMUST00000166102.1|Pde1c|ENSMUSG00000004347.10|phosphodiesterase 1C 	ENSMUST00000164037.1|Pde1c|ENSMUSG00000004347.10|phosphodiesterase 1C 	ENSMUST00000114327.2|Pde1c|ENSMUSG00000004347.10|phosphodiesterase 1C
mm10_v2_chr6_+_128662379_128662396	0.316403	Homez	ENSMUST00000032518.4|Clec2h|ENSMUSG00000030364.4|C-type lectin domain family 2, member h
mm10_v2_chr18_+_10725530_10725564	0.311776	Homez	ENSMUST00000052838.4|Mib1|ENSMUSG00000024294.7|mindbomb homolog 1 (Drosophila)
mm10_v2_chr2_-_3419019_3419061	0.308164	Homez	ENSMUST00000115084.1|Meig1|ENSMUSG00000026650.9|meiosis expressed gene 1 	ENSMUST00000115083.1|Meig1|ENSMUSG00000026650.9|meiosis expressed gene 1
mm10_v2_chr5_+_140419248_140419377	0.307371	Homez	ENSMUST00000100507.3|Eif3b|ENSMUSG00000056076.9|eukaryotic translation initiation factor 3, subunit B
mm10_v2_chr15_+_76797628_76797628	0.306124	Homez	ENSMUST00000165535.2|Gm17271|ENSMUSG00000090429.2|predicted gene, 17271
mm10_v2_chr6_-_69284319_69284319	0.30486	Homez	ENSMUST00000103349.1|Igkv4-69|ENSMUSG00000076548.1|immunoglobulin kappa variable 4-69
mm10_v2_chr1_-_139377041_139377078	0.303885	Homez	ENSMUST00000059825.5|Crb1|ENSMUSG00000063681.8|crumbs homolog 1 (Drosophila)
mm10_v2_chr6_-_131293187_131293248	0.302897	Homez	ENSMUST00000032307.5|Magohb|ENSMUSG00000030188.6|mago-nashi homolog B (Drosophila)
mm10_v2_chr17_+_22689771_22689771	0.296441	Homez	ENSMUST00000055305.8|Gm9805|ENSMUSG00000046088.8|predicted gene 9805
mm10_v2_chr1_-_33757711_33757794	0.295976	Homez	ENSMUST00000044691.7|Bag2|ENSMUSG00000042215.7|BCL2-associated athanogene 2
mm10_v2_chr17_+_27839974_27840119	0.295287	Homez	ENSMUST00000071006.7|Snrpc|ENSMUSG00000024217.9|U1 small nuclear ribonucleoprotein C
mm10_v2_chr5_+_100518309_100518474	0.292917	Homez	ENSMUST00000045993.8|Cops4|ENSMUSG00000035297.8|COP9 (constitutive photomorphogenic) homolog, subunit 4 (Arabidopsis thaliana) 	ENSMUST00000151414.1|Cops4|ENSMUSG00000035297.8|COP9 (constitutive photomorphogenic) homolog, subunit 4 (Arabidopsis thaliana)
mm10_v2_chr19_-_46338632_46338670	0.289195	Homez	ENSMUST00000051234.8|Cuedc2|ENSMUSG00000036748.9|CUE domain containing 2 	ENSMUST00000167861.1|Cuedc2|ENSMUSG00000036748.9|CUE domain containing 2
mm10_v2_chrX_-_37085402_37085402	0.287315	Homez	ENSMUST00000115231.3|Rpl39|ENSMUSG00000079641.3|ribosomal protein L39
mm10_v2_chr2_+_61711694_61711786	0.281548	Homez	ENSMUST00000028278.7|Psmd14|ENSMUSG00000026914.9|proteasome (prosome, macropain) 26S subunit, non-ATPase, 14
mm10_v2_chr8_-_72213636_72213636	0.280369	Homez	ENSMUST00000109987.1|Gm11034|ENSMUSG00000079016.1|predicted gene 11034
mm10_v2_chr7_+_127470354_127470371	0.277174	Homez	ENSMUST00000106292.1|Prr14|ENSMUSG00000030822.9|proline rich 14
mm10_v2_chr5_-_24581879_24581879	0.275479	Homez	ENSMUST00000088299.4|Gm10221|ENSMUSG00000067719.4|predicted gene 10221
mm10_v2_chr19_-_31765027_31765079	0.275404	Homez	ENSMUST00000065067.6|Prkg1|ENSMUSG00000052920.8|protein kinase, cGMP-dependent, type I
mm10_v2_chr2_-_58052832_58052870	0.274979	Homez	ENSMUST00000090940.5|Ermn|ENSMUSG00000026830.9|ermin, ERM-like protein
mm10_v2_chr5_-_123141067_123141094	0.270513	Homez	ENSMUST00000162697.1|AI480526|ENSMUSG00000090086.1|expressed sequence AI480526 	ENSMUST00000160321.1|AI480526|ENSMUSG00000090086.1|expressed sequence AI480526 	ENSMUST00000159637.1|AI480526|ENSMUSG00000090086.1|expressed sequence AI480526
mm10_v2_chr9_+_64179289_64179349	0.268908	Homez	ENSMUST00000034965.6|Snapc5|ENSMUSG00000032398.6|small nuclear RNA activating complex, polypeptide 5
mm10_v2_chr12_+_65036319_65036358	0.265876	Homez	ENSMUST00000120580.1|Prpf39|ENSMUSG00000035597.12|PRP39 pre-mRNA processing factor 39 homolog (yeast)
mm10_v2_chr12_-_40248073_40248086	0.262597	Homez	ENSMUST00000169926.1|Ifrd1|ENSMUSG00000001627.5|interferon-related developmental regulator 1
mm10_v2_chr16_-_18876655_18876767	0.256373	Homez	ENSMUST00000023391.8|Mrpl40|ENSMUSG00000022706.9|mitochondrial ribosomal protein L40
mm10_v2_chr5_+_45520221_45520327	0.255909	Homez	ENSMUST00000156481.1|Med28|ENSMUSG00000015804.8|mediator of RNA polymerase II transcription, subunit 28 homolog (yeast) 	ENSMUST00000119579.1|Med28|ENSMUSG00000015804.8|mediator of RNA polymerase II transcription, subunit 28 homolog (yeast) 	ENSMUST00000118833.1|Med28|ENSMUSG00000015804.8|mediator of RNA polymerase II transcription, subunit 28 homolog (yeast)
mm10_v2_chrX_-_57392962_57392988	0.254273	Homez	ENSMUST00000114730.1|Rbmx|ENSMUSG00000031134.10|RNA binding motif protein, X chromosome
mm10_v2_chr7_+_49910112_49910146	0.252673	Homez	ENSMUST00000056442.5|Slc6a5|ENSMUSG00000039728.8|solute carrier family 6 (neurotransmitter transporter, glycine), member 5
mm10_v2_chr9_+_64173364_64173388	0.249267	Homez	ENSMUST00000034966.7|Rpl4|ENSMUSG00000032399.7|ribosomal protein L4
mm10_v2_chr1_+_163994866_163994904	0.242209	Homez	ENSMUST00000111490.1|Mettl18|ENSMUSG00000041396.7|methyltransferase like 18 	ENSMUST00000045694.7|Mettl18|ENSMUSG00000041396.7|methyltransferase like 18
mm10_v2_chr16_+_78930940_78930958	0.241992	Homez	ENSMUST00000114216.1|Chodl|ENSMUSG00000022860.8|chondrolectin 	ENSMUST00000069148.6|Chodl|ENSMUSG00000022860.8|chondrolectin 	ENSMUST00000023568.7|Chodl|ENSMUSG00000022860.8|chondrolectin
mm10_v2_chr4_+_155705088_155705183	0.240195	Homez	ENSMUST00000105595.1|Ssu72|ENSMUSG00000029038.3|Ssu72 RNA polymerase II CTD phosphatase homolog (yeast)
mm10_v2_chr18_+_35770318_35770318	0.240151	Homez	ENSMUST00000165299.1|Gm16490|ENSMUSG00000091842.1|predicted gene 16490
mm10_v2_chr1_-_140183283_140183332	0.238939	Homez	ENSMUST00000111977.1|Cfh|ENSMUSG00000026365.9|complement component factor h
mm10_v2_chr2_+_180582712_180582742	0.237247	Homez	ENSMUST00000029085.8|Mrgbp|ENSMUSG00000027569.9|MRG/MORF4L binding protein
mm10_v2_chr8_-_46080284_46080284	0.235903	Homez	ENSMUST00000177186.1|Snx25|ENSMUSG00000038291.10|sorting nexin 25
mm10_v2_chr5_-_140830430_140830453	0.234906	Homez	ENSMUST00000000153.4|Gna12|ENSMUSG00000000149.6|guanine nucleotide binding protein, alpha 12
mm10_v2_chr6_+_142413833_142413833	0.231795	Homez	ENSMUST00000126521.2|B230216G23Rik|ENSMUSG00000071112.5|RIKEN cDNA B230216G23 gene
mm10_v2_chr3_+_137341067_137341095	0.23161	Homez	ENSMUST00000122064.1|Emcn|ENSMUSG00000054690.11|endomucin
mm10_v2_chr14_-_27508460_27508503	0.231223	Homez	ENSMUST00000050480.6|Ccdc66|ENSMUSG00000046753.9|coiled-coil domain containing 66
mm10_v2_chr2_+_85037448_85037530	0.222626	Homez	ENSMUST00000168266.1|Ssrp1|ENSMUSG00000027067.10|structure specific recognition protein 1 	ENSMUST00000130729.1|Ssrp1|ENSMUSG00000027067.10|structure specific recognition protein 1
mm10_v2_chrX_-_57393020_57393040	0.217426	Homez	ENSMUST00000143310.1|Rbmx|ENSMUSG00000031134.10|RNA binding motif protein, X chromosome 	ENSMUST00000098470.2|Rbmx|ENSMUSG00000031134.10|RNA binding motif protein, X chromosome 	ENSMUST00000114726.1|Rbmx|ENSMUSG00000031134.10|RNA binding motif protein, X chromosome
mm10_v2_chr3_+_145938004_145938063	0.215376	Homez	ENSMUST00000039571.7|2410004B18Rik|ENSMUSG00000036873.7|RIKEN cDNA 2410004B18 gene
mm10_v2_chr14_-_47276790_47276848	0.215266	Homez	ENSMUST00000111792.1|Wdhd1|ENSMUSG00000037572.10|WD repeat and HMG-box DNA binding protein 1 	ENSMUST00000111791.1|Wdhd1|ENSMUSG00000037572.10|WD repeat and HMG-box DNA binding protein 1 	ENSMUST00000111790.1|Wdhd1|ENSMUSG00000037572.10|WD repeat and HMG-box DNA binding protein 1
mm10_v2_chr8_-_107425029_107425056	0.212409	Homez	ENSMUST00000003946.8|Nob1|ENSMUSG00000003848.8|NIN1/RPN12 binding protein 1 homolog (S. cerevisiae)
mm10_v2_chr2_-_26933781_26933928	0.211329	Homez	ENSMUST00000154651.1|Surf4|ENSMUSG00000014867.3|surfeit gene 4 	ENSMUST00000015011.3|Surf4|ENSMUSG00000014867.3|surfeit gene 4
mm10_v2_chr14_-_52305056_52305130	0.208944	Homez	ENSMUST00000174853.1|Mettl3|ENSMUSG00000022160.11|methyltransferase like 3 	ENSMUST00000022767.9|Mettl3|ENSMUSG00000022160.11|methyltransferase like 3
mm10_v2_chr4_+_146654927_146654927	0.207389	Homez	ENSMUST00000070932.3|Gm13248|ENSMUSG00000063245.5|predicted gene 13248
mm10_v2_chr6_+_71282280_71282280	0.206581	Homez	ENSMUST00000080949.7|Krcc1|ENSMUSG00000053012.11|lysine-rich coiled-coil 1
mm10_v2_chr6_+_149141638_149141663	0.204548	Homez	ENSMUST00000166416.1|Mettl20|ENSMUSG00000039958.11|methyltransferase like 20 	ENSMUST00000111551.1|Mettl20|ENSMUSG00000039958.11|methyltransferase like 20
mm10_v2_chr10_-_77515775_77515818	0.201181	Homez	ENSMUST00000045454.7|Fam207a|ENSMUSG00000032977.8|family with sequence similarity 207, member A
mm10_v2_chr4_-_6454262_6454330	0.199421	Homez	ENSMUST00000029910.5|Nsmaf|ENSMUSG00000028245.9|neutral sphingomyelinase (N-SMase) activation associated factor
mm10_v2_chr7_+_16175275_16175438	0.198185	Homez	ENSMUST00000176506.1|Meis3|ENSMUSG00000041420.12|Meis homeobox 3 	ENSMUST00000002495.11|Meis3|ENSMUSG00000041420.12|Meis homeobox 3
mm10_v2_chr7_-_46710642_46710687	0.198041	Homez	ENSMUST00000143082.1|Saal1|ENSMUSG00000006763.6|serum amyloid A-like 1
mm10_v2_chr11_-_103017167_103017179	0.190325	Homez	ENSMUST00000021313.2|Dcakd|ENSMUSG00000020935.2|dephospho-CoA kinase domain containing
mm10_v2_chr10_-_80918212_80918256	0.189223	Homez	ENSMUST00000057623.7|Lmnb2|ENSMUSG00000062075.7|lamin B2 	ENSMUST00000179022.1|Lmnb2|ENSMUSG00000062075.7|lamin B2
mm10_v2_chr5_+_52783055_52783091	0.188655	Homez	ENSMUST00000113904.2|Zcchc4|ENSMUSG00000029179.8|zinc finger, CCHC domain containing 4 	ENSMUST00000031077.8|Zcchc4|ENSMUSG00000029179.8|zinc finger, CCHC domain containing 4
mm10_v2_chr2_-_77946180_77946199	0.188027	Homez	ENSMUST00000111824.1|Cwc22|ENSMUSG00000027014.8|CWC22 spliceosome-associated protein homolog (S. cerevisiae) 	ENSMUST00000111819.1|Cwc22|ENSMUSG00000027014.8|CWC22 spliceosome-associated protein homolog (S. cerevisiae) 	ENSMUST00000128963.1|Cwc22|ENSMUSG00000027014.8|CWC22 spliceosome-associated protein homolog (S. cerevisiae)
mm10_v2_chr5_-_149636331_149636376	0.184522	Homez	ENSMUST00000074846.7|Hsph1|ENSMUSG00000029657.9|heat shock 105kDa/110kDa protein 1 	ENSMUST00000110498.1|Hsph1|ENSMUSG00000029657.9|heat shock 105kDa/110kDa protein 1 	ENSMUST00000127977.1|Hsph1|ENSMUSG00000029657.9|heat shock 105kDa/110kDa protein 1 	ENSMUST00000132412.1|Hsph1|ENSMUSG00000029657.9|heat shock 105kDa/110kDa protein 1
mm10_v2_chr1_+_173420567_173420622	0.184331	Homez	ENSMUST00000173023.1|Aim2|ENSMUSG00000037860.9|absent in melanoma 2
mm10_v2_chr2_+_163017354_163017513	0.183238	Homez	ENSMUST00000018002.6|Ift52|ENSMUSG00000017858.6|intraflagellar transport 52 	ENSMUST00000150396.1|Ift52|ENSMUSG00000017858.6|intraflagellar transport 52
mm10_v2_chr1_-_14310198_14310218	0.182415	Homez	ENSMUST00000168081.2|Eya1|ENSMUSG00000025932.8|eyes absent 1 homolog (Drosophila) 	ENSMUST00000027066.6|Eya1|ENSMUSG00000025932.8|eyes absent 1 homolog (Drosophila)
mm10_v2_chr12_-_54695829_54695884	0.182094	Homez	ENSMUST00000162106.1|Eapp|ENSMUSG00000054302.9|E2F-associated phosphoprotein 	ENSMUST00000160085.1|Eapp|ENSMUSG00000054302.9|E2F-associated phosphoprotein 	ENSMUST00000161592.1|Eapp|ENSMUSG00000054302.9|E2F-associated phosphoprotein 	ENSMUST00000163433.1|Eapp|ENSMUSG00000054302.9|E2F-associated phosphoprotein
mm10_v2_chr4_-_107810948_107810948	0.179236	Homez	ENSMUST00000097930.1|B230314M03Rik|ENSMUSG00000073779.1|RIKEN cDNA B230314M03 gene
mm10_v2_chr11_-_48871344_48871407	0.173968	Homez	ENSMUST00000049519.3|Irgm1|ENSMUSG00000046879.6|immunity-related GTPase family M member 1
mm10_v2_chr4_-_117682233_117682279	0.16896	Homez	ENSMUST00000102687.3|Dmap1|ENSMUSG00000009640.5|DNA methyltransferase 1-associated protein 1
mm10_v2_chr6_+_113393062_113393160	0.168716	Homez	ENSMUST00000138131.2|Ttll3|ENSMUSG00000030276.13|tubulin tyrosine ligase-like family, member 3
mm10_v2_chr12_-_115964196_115964196	0.167457	Homez	ENSMUST00000103550.2|Ighv1-83|ENSMUSG00000096466.1|immunoglobulin heavy variable 1-83
mm10_v2_chr2_+_69723071_69723093	0.164456	Homez	ENSMUST00000040915.8|Ppig|ENSMUSG00000042133.10|peptidyl-prolyl isomerase G (cyclophilin G)
mm10_v2_chr5_-_110108154_110108204	0.164253	Homez	ENSMUST00000077220.7|Gtpbp6|ENSMUSG00000033434.9|GTP binding protein 6 (putative)
mm10_v2_chrX_-_7899196_7899206	0.162781	Homez	ENSMUST00000115654.1|Pqbp1|ENSMUSG00000031157.4|polyglutamine binding protein 1
mm10_v2_chr1_+_44147847_44147934	0.161638	Homez	ENSMUST00000027214.3|Ercc5|ENSMUSG00000026048.10|excision repair cross-complementing rodent repair deficiency, complementation group 5
mm10_v2_chr3_-_63899437_63899477	0.161007	Homez	ENSMUST00000159188.1|Plch1|ENSMUSG00000036834.10|phospholipase C, eta 1 	ENSMUST00000177143.1|Plch1|ENSMUSG00000036834.10|phospholipase C, eta 1
mm10_v2_chr18_-_42262053_42262140	0.158871	Homez	ENSMUST00000097590.3|Lars|ENSMUSG00000024493.8|leucyl-tRNA synthetase
mm10_v2_chr6_+_83034173_83034252	0.158828	Homez	ENSMUST00000000707.2|Loxl3|ENSMUSG00000000693.4|lysyl oxidase-like 3 	ENSMUST00000101257.3|Loxl3|ENSMUSG00000000693.4|lysyl oxidase-like 3
mm10_v2_chr3_+_157534103_157534160	0.158743	Homez	ENSMUST00000106058.1|Zranb2|ENSMUSG00000028180.12|zinc finger, RAN-binding domain containing 2
mm10_v2_chrX_-_7899220_7899271	0.153646	Homez	ENSMUST00000033497.2|Pqbp1|ENSMUSG00000031157.4|polyglutamine binding protein 1
mm10_v2_chr2_-_106974383_106974424	0.153229	Homez	ENSMUST00000028536.6|Arl14ep|ENSMUSG00000027122.9|ADP-ribosylation factor-like 14 effector protein
mm10_v2_chr5_+_130029277_130029340	0.152173	Homez	ENSMUST00000026608.7|Crcp|ENSMUSG00000025532.10|calcitonin gene-related peptide-receptor component protein
mm10_v2_chrX_-_136743675_136743692	0.14663	Homez	ENSMUST00000166478.1|Morf4l2|ENSMUSG00000031422.10|mortality factor 4 like 2 	ENSMUST00000113097.1|Morf4l2|ENSMUSG00000031422.10|mortality factor 4 like 2
mm10_v2_chr3_+_127791374_127791390	0.145325	Homez	ENSMUST00000171621.1|Tifa|ENSMUSG00000046688.8|TRAF-interacting protein with forkhead-associated domain
mm10_v2_chr9_+_55150050_55150083	0.143378	Homez	ENSMUST00000122441.1|Ube2q2|ENSMUSG00000032307.10|ubiquitin-conjugating enzyme E2Q (putative) 2
mm10_v2_chr15_+_9071252_9071273	0.141185	Homez	ENSMUST00000100789.4|Nadk2|ENSMUSG00000022253.8|NAD kinase 2, mitochondrial 	ENSMUST00000100790.3|Nadk2|ENSMUSG00000022253.8|NAD kinase 2, mitochondrial 	ENSMUST00000067760.4|Nadk2|ENSMUSG00000022253.8|NAD kinase 2, mitochondrial
mm10_v2_chr19_-_60790692_60790700	0.139752	Homez	ENSMUST00000025955.6|Eif3a|ENSMUSG00000024991.7|eukaryotic translation initiation factor 3, subunit A
mm10_v2_chr10_-_81291227_81291282	0.139523	Homez	ENSMUST00000045744.6|Tjp3|ENSMUSG00000034917.7|tight junction protein 3
mm10_v2_chr18_+_56572822_56572822	0.138496	Homez	ENSMUST00000008445.5|Phax|ENSMUSG00000008301.5|phosphorylated adaptor for RNA export
mm10_v2_chr13_-_19395728_19395789	0.137941	Homez	ENSMUST00000039694.7|Stard3nl|ENSMUSG00000003062.8|STARD3 N-terminal like
mm10_v2_chr16_-_8672145_8672161	0.135687	Homez	ENSMUST00000008537.8|Carhsp1|ENSMUSG00000008393.8|calcium regulated heat stable protein 1
mm10_v2_chr5_-_149636164_149636190	0.133948	Homez	ENSMUST00000076410.4|Hsph1|ENSMUSG00000029657.9|heat shock 105kDa/110kDa protein 1
mm10_v2_chr8_+_88199194_88199224	0.132249	Homez	ENSMUST00000119033.1|Papd5|ENSMUSG00000036779.6|PAP associated domain containing 5 	ENSMUST00000066748.3|Papd5|ENSMUSG00000036779.6|PAP associated domain containing 5 	ENSMUST00000118952.1|Papd5|ENSMUSG00000036779.6|PAP associated domain containing 5
mm10_v2_chr2_+_119034783_119034869	0.129393	Homez	ENSMUST00000028796.1|Rpusd2|ENSMUSG00000027324.1|RNA pseudouridylate synthase domain containing 2
mm10_v2_chr17_+_56990264_56990330	0.127305	Homez	ENSMUST00000002735.7|Clpp|ENSMUSG00000002660.7|ClpP caseinolytic peptidase, ATP-dependent, proteolytic subunit
mm10_v2_chr8_+_126422478_126422514	0.124416	Homez	ENSMUST00000059093.5|Coa6|ENSMUSG00000051671.6|cytochrome c oxidase assembly factor 6
mm10_v2_chr9_-_21312255_21312333	0.121337	Homez	ENSMUST00000115433.3|Ap1m2|ENSMUSG00000003309.7|adaptor protein complex AP-1, mu 2 subunit 	ENSMUST00000003397.7|Ap1m2|ENSMUSG00000003309.7|adaptor protein complex AP-1, mu 2 subunit
mm10_v2_chr17_-_24455265_24455345	0.118436	Homez	ENSMUST00000056032.7|E4f1|ENSMUSG00000024137.8|E4F transcription factor 1
mm10_v2_chr6_+_82052307_82052330	0.118168	Homez	ENSMUST00000149023.1|Eva1a|ENSMUSG00000035104.8|eva-1 homolog A (C. elegans)
mm10_v2_chr3_-_50443603_50443615	0.116646	Homez	ENSMUST00000029297.4|Slc7a11|ENSMUSG00000027737.5|solute carrier family 7 (cationic amino acid transporter, y+ system), member 11
mm10_v2_chr13_+_94788873_94788951	0.115971	Homez	ENSMUST00000046644.5|Tbca|ENSMUSG00000042043.5|tubulin cofactor A
mm10_v2_chrX_+_114474312_114474353	0.111508	Homez	ENSMUST00000113371.1|Klhl4|ENSMUSG00000025597.7|kelch-like 4 	ENSMUST00000040504.5|Klhl4|ENSMUSG00000025597.7|kelch-like 4
mm10_v2_chr6_+_30723541_30723552	0.1103	Homez	ENSMUST00000115127.1|Mest|ENSMUSG00000051855.9|mesoderm specific transcript
mm10_v2_chr8_+_70172383_70172424	0.102874	Homez	ENSMUST00000002413.8|Tmem161a|ENSMUSG00000002342.11|transmembrane protein 161A 	ENSMUST00000182980.1|Tmem161a|ENSMUSG00000002342.11|transmembrane protein 161A 	ENSMUST00000182365.1|Tmem161a|ENSMUSG00000002342.11|transmembrane protein 161A
mm10_v2_chr11_-_62281342_62281419	0.102131	Homez	ENSMUST00000072916.4|Zswim7|ENSMUSG00000014243.5|zinc finger SWIM-type containing 7
mm10_v2_chr6_+_88724412_88724461	0.100804	Homez	ENSMUST00000113585.2|Mgll|ENSMUSG00000033174.11|monoglyceride lipase
mm10_v2_chr3_-_108445143_108445178	0.0994691	Homez	ENSMUST00000132467.1|Sars|ENSMUSG00000068739.7|seryl-aminoacyl-tRNA synthetase 	ENSMUST00000102625.4|Sars|ENSMUSG00000068739.7|seryl-aminoacyl-tRNA synthetase
mm10_v2_chr8_-_104534630_104534646	0.0986769	Homez	ENSMUST00000162466.1|Nae1|ENSMUSG00000031878.11|NEDD8 activating enzyme E1 subunit 1 	ENSMUST00000034349.9|Nae1|ENSMUSG00000031878.11|NEDD8 activating enzyme E1 subunit 1
mm10_v2_chr12_-_59061425_59061477	0.0953688	Homez	ENSMUST00000021380.8|Trappc6b|ENSMUSG00000020993.8|trafficking protein particle complex 6B
mm10_v2_chr19_-_41743665_41743706	0.0934753	Homez	ENSMUST00000025993.3|Slit1|ENSMUSG00000025020.5|slit homolog 1 (Drosophila)
mm10_v2_chr10_+_24595623_24595780	0.0910902	Homez	ENSMUST00000176228.1|Ctgf|ENSMUSG00000019997.5|connective tissue growth factor 	ENSMUST00000129142.1|Ctgf|ENSMUSG00000019997.5|connective tissue growth factor
mm10_v2_chr7_-_13278661_13278721	0.090047	Homez	ENSMUST00000144470.1|6330408A02Rik|ENSMUSG00000070814.8|RIKEN cDNA 6330408A02 gene 	ENSMUST00000119558.1|6330408A02Rik|ENSMUSG00000070814.8|RIKEN cDNA 6330408A02 gene 	ENSMUST00000108532.2|6330408A02Rik|ENSMUSG00000070814.8|RIKEN cDNA 6330408A02 gene
mm10_v2_chr4_+_8535604_8535717	0.0850749	Homez	ENSMUST00000060232.7|Rab2a|ENSMUSG00000047187.9|RAB2A, member RAS oncogene family
mm10_v2_chr19_-_12501996_12502152	0.0847966	Homez	ENSMUST00000045521.7|Dtx4|ENSMUSG00000039982.7|deltex 4 homolog (Drosophila)
mm10_v2_chr7_+_60155538_60155538	0.0838414	Homez	ENSMUST00000057611.4|Gm7367|ENSMUSG00000047370.4|predicted pseudogene 7367
mm10_v2_chr2_+_69722797_69722840	0.0834336	Homez	ENSMUST00000090858.3|Ppig|ENSMUSG00000042133.10|peptidyl-prolyl isomerase G (cyclophilin G)
mm10_v2_chr2_-_27475622_27475698	0.0811875	Homez	ENSMUST00000138693.1|Brd3|ENSMUSG00000026918.10|bromodomain containing 3 	ENSMUST00000113941.2|Brd3|ENSMUSG00000026918.10|bromodomain containing 3 	ENSMUST00000077737.6|Brd3|ENSMUSG00000026918.10|bromodomain containing 3
mm10_v2_chr10_+_127849917_127849928	0.0803548	Homez	ENSMUST00000077530.2|Rdh19|ENSMUSG00000054052.5|retinol dehydrogenase 19
mm10_v2_chr11_-_48871408_48871424	0.0803245	Homez	ENSMUST00000097271.2|Irgm1|ENSMUSG00000046879.6|immunity-related GTPase family M member 1
mm10_v2_chr16_-_20302358_20302401	0.0789325	Homez	ENSMUST00000048642.8|Parl|ENSMUSG00000033918.9|presenilin associated, rhomboid-like
mm10_v2_chrM_+_10167_10167	0.0781026	Homez	ENSMUST00000082414.1|mt-Nd4|ENSMUSG00000064363.1|mitochondrially encoded NADH dehydrogenase 4
mm10_v2_chr16_+_34690548_34690616	0.0774835	Homez	ENSMUST00000023532.6|Ccdc14|ENSMUSG00000022833.6|coiled-coil domain containing 14
mm10_v2_chr1_+_93342854_93342854	0.0743616	Homez	ENSMUST00000027494.4|Ppp1r7|ENSMUSG00000026275.7|protein phosphatase 1, regulatory (inhibitor) subunit 7
mm10_v2_chr9_-_60649793_60649805	0.0732202	Homez	ENSMUST00000053171.7|Lrrc49|ENSMUSG00000047766.9|leucine rich repeat containing 49
mm10_v2_chr6_+_91878034_91878089	0.0627687	Homez	ENSMUST00000037783.5|Ccdc174|ENSMUSG00000034083.10|coiled-coil domain containing 174
mm10_v2_chr6_-_34977999_34977999	0.0614874	Homez	ENSMUST00000044387.7|2010107G12Rik|ENSMUSG00000029847.7|RIKEN cDNA 2010107G12 gene
mm10_v2_chr13_+_58281183_58281196	0.0596543	Homez	ENSMUST00000180882.1|Gm26555|ENSMUSG00000097399.1|predicted gene, 26555 	ENSMUST00000180452.1|Gm26555|ENSMUSG00000097399.1|predicted gene, 26555
mm10_v2_chr6_-_112696604_112696686	0.0586651	Homez	ENSMUST00000113182.1|Rad18|ENSMUSG00000030254.10|RAD18 homolog (S. cerevisiae) 	ENSMUST00000113180.1|Rad18|ENSMUSG00000030254.10|RAD18 homolog (S. cerevisiae) 	ENSMUST00000068487.5|Rad18|ENSMUSG00000030254.10|RAD18 homolog (S. cerevisiae) 	ENSMUST00000077088.4|Rad18|ENSMUSG00000030254.10|RAD18 homolog (S. cerevisiae)
mm10_v2_chr4_+_156235999_156236051	0.0564716	Homez	ENSMUST00000179543.1|Noc2l|ENSMUSG00000095567.1|nucleolar complex associated 2 homolog (S. cerevisiae) 	ENSMUST00000179886.1|Noc2l|ENSMUSG00000095567.1|nucleolar complex associated 2 homolog (S. cerevisiae)
mm10_v2_chr3_+_90476121_90476220	0.0551804	Homez	ENSMUST00000001042.8|Ilf2|ENSMUSG00000001016.8|interleukin enhancer binding factor 2
mm10_v2_chr1_+_172698046_172698063	0.0534803	Homez	ENSMUST00000038495.3|Crp|ENSMUSG00000037942.4|C-reactive protein, pentraxin-related
mm10_v2_chr1_+_59684949_59685023	0.0528741	Homez	ENSMUST00000027174.3|Nop58|ENSMUSG00000026020.3|NOP58 ribonucleoprotein
mm10_v2_chr11_-_40695203_40695223	0.0527297	Homez	ENSMUST00000101347.3|Mat2b|ENSMUSG00000042032.7|methionine adenosyltransferase II, beta
mm10_v2_chr2_-_30359190_30359272	0.0512689	Homez	ENSMUST00000100215.4|Sh3glb2|ENSMUSG00000026860.10|SH3-domain GRB2-like endophilin B2 	ENSMUST00000113620.3|Sh3glb2|ENSMUSG00000026860.10|SH3-domain GRB2-like endophilin B2
mm10_v2_chr4_-_134915010_134915024	0.0495786	Homez	ENSMUST00000105863.1|Tmem50a|ENSMUSG00000028822.5|transmembrane protein 50A 	ENSMUST00000030626.5|Tmem50a|ENSMUSG00000028822.5|transmembrane protein 50A
mm10_v2_chr18_-_43477764_43477836	0.0482618	Homez	ENSMUST00000057110.9|Eif3j2|ENSMUSG00000043424.9|eukaryotic translation initiation factor 3, subunit J2
mm10_v2_chr14_+_20294690_20294745	0.0482113	Homez	ENSMUST00000022343.4|Nudt13|ENSMUSG00000021809.9|nudix (nucleoside diphosphate linked moiety X)-type motif 13
mm10_v2_chr5_+_145083830_145083887	0.0470638	Homez	ENSMUST00000031625.8|Arpc1a|ENSMUSG00000029621.8|actin related protein 2/3 complex, subunit 1A
mm10_v2_chr5_-_45856496_45856552	0.045217	Homez	ENSMUST00000087164.3|Lcorl|ENSMUSG00000015882.11|ligand dependent nuclear receptor corepressor-like 	ENSMUST00000121573.1|Lcorl|ENSMUSG00000015882.11|ligand dependent nuclear receptor corepressor-like
mm10_v2_chr9_-_51102062_51102085	0.0450091	Homez	ENSMUST00000170947.1|4833427G06Rik|ENSMUSG00000032057.8|RIKEN cDNA 4833427G06 gene
mm10_v2_chr13_-_34002784_34002812	0.0445151	Homez	ENSMUST00000166354.1|Serpinb6a|ENSMUSG00000060147.9|serine (or cysteine) peptidase inhibitor, clade B, member 6a 	ENSMUST00000076532.7|Serpinb6a|ENSMUSG00000060147.9|serine (or cysteine) peptidase inhibitor, clade B, member 6a 	ENSMUST00000171034.1|Serpinb6a|ENSMUSG00000060147.9|serine (or cysteine) peptidase inhibitor, clade B, member 6a
mm10_v2_chr14_+_56887795_56887795	0.043994	Homez	ENSMUST00000022511.8|Zmym2|ENSMUSG00000021945.8|zinc finger, MYM-type 2
mm10_v2_chr8_-_105758570_105758664	0.0376938	Homez	ENSMUST00000155038.2|Gfod2|ENSMUSG00000013150.9|glucose-fructose oxidoreductase domain containing 2 	ENSMUST00000013294.9|Gfod2|ENSMUSG00000013150.9|glucose-fructose oxidoreductase domain containing 2
mm10_v2_chr16_-_57606816_57606879	0.0373381	Homez	ENSMUST00000114371.3|Cmss1|ENSMUSG00000022748.7|cms small ribosomal subunit 1
mm10_v2_chr7_+_16175085_16175139	0.0371374	Homez	ENSMUST00000176342.1|Meis3|ENSMUSG00000041420.12|Meis homeobox 3 	ENSMUST00000177540.1|Meis3|ENSMUSG00000041420.12|Meis homeobox 3
mm10_v2_chr17_-_25844514_25844565	0.0356797	Homez	ENSMUST00000176709.1|Rhot2|ENSMUSG00000025733.11|ras homolog gene family, member T2
mm10_v2_chr13_+_66904914_66904914	0.0341815	Homez	ENSMUST00000168767.2|Gm10767|ENSMUSG00000074826.4|predicted gene 10767
mm10_v2_chr11_+_116853752_116853836	0.0336686	Homez	ENSMUST00000021173.7|Mfsd11|ENSMUSG00000020818.10|major facilitator superfamily domain containing 11
mm10_v2_chr9_+_22454290_22454290	0.0324007	Homez	ENSMUST00000168332.1|Gm17545|ENSMUSG00000091159.1|predicted gene, 17545
mm10_v2_chr18_-_66002612_66002637	0.0318997	Homez	ENSMUST00000120461.1|Lman1|ENSMUSG00000041891.9|lectin, mannose-binding, 1 	ENSMUST00000048260.7|Lman1|ENSMUSG00000041891.9|lectin, mannose-binding, 1
mm10_v2_chr10_+_24595434_24595445	0.0282539	Homez	ENSMUST00000020171.5|Ctgf|ENSMUSG00000019997.5|connective tissue growth factor
mm10_v2_chr11_-_45955183_45955193	0.0262608	Homez	ENSMUST00000109254.1|Thg1l|ENSMUSG00000011254.10|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)
mm10_v2_chr8_+_71366848_71367005	0.0253551	Homez	ENSMUST00000110053.2|Use1|ENSMUSG00000002395.8|unconventional SNARE in the ER 1 homolog (S. cerevisiae) 	ENSMUST00000110054.1|Use1|ENSMUSG00000002395.8|unconventional SNARE in the ER 1 homolog (S. cerevisiae) 	ENSMUST00000139541.1|Use1|ENSMUSG00000002395.8|unconventional SNARE in the ER 1 homolog (S. cerevisiae)
mm10_v2_chr2_-_103761178_103761286	0.0201017	Homez	ENSMUST00000028608.6|Nat10|ENSMUSG00000027185.8|N-acetyltransferase 10
mm10_v2_chr14_-_103099499_103099554	0.0195853	Homez	ENSMUST00000022720.8|Fbxl3|ENSMUSG00000022124.8|F-box and leucine-rich repeat protein 3
mm10_v2_chrX_+_42526585_42526585	0.0178424	Homez	ENSMUST00000101619.3|Gm10483|ENSMUSG00000073231.3|predicted gene 10483
mm10_v2_chr19_-_6084941_6084957	0.0176199	Homez	ENSMUST00000025707.2|Zfpl1|ENSMUSG00000024792.2|zinc finger like protein 1 	ENSMUST00000160712.1|Zfpl1|ENSMUSG00000024792.2|zinc finger like protein 1
mm10_v2_chr18_-_35740499_35740554	0.016753	Homez	ENSMUST00000115728.3|Tmem173|ENSMUSG00000024349.9|transmembrane protein 173
mm10_v2_chr12_-_108894116_108894174	0.0142469	Homez	ENSMUST00000109848.3|Wars|ENSMUSG00000021266.10|tryptophanyl-tRNA synthetase
mm10_v2_chr8_+_105900421_105900467	0.0138112	Homez	ENSMUST00000049699.8|Pskh1|ENSMUSG00000048310.8|protein serine kinase H1
mm10_v2_chr11_-_106750628_106750660	0.0137508	Homez	ENSMUST00000068021.2|Pecam1|ENSMUSG00000020717.13|platelet/endothelial cell adhesion molecule 1
mm10_v2_chr6_-_125231772_125231860	0.0130952	Homez	ENSMUST00000043422.7|Tapbpl|ENSMUSG00000038213.7|TAP binding protein-like
mm10_v2_chr2_-_30359278_30359341	0.0104007	Homez	ENSMUST00000163668.2|Sh3glb2|ENSMUSG00000026860.10|SH3-domain GRB2-like endophilin B2 	ENSMUST00000028214.8|Sh3glb2|ENSMUSG00000026860.10|SH3-domain GRB2-like endophilin B2 	ENSMUST00000113621.3|Sh3glb2|ENSMUSG00000026860.10|SH3-domain GRB2-like endophilin B2
mm10_v2_chr7_-_30195046_30195164	0.0103607	Homez	ENSMUST00000001845.5|Capns1|ENSMUSG00000001794.6|calpain, small subunit 1
mm10_v2_chr2_+_28468056_28468094	0.00863483	Homez	ENSMUST00000038600.3|Mrps2|ENSMUSG00000035772.5|mitochondrial ribosomal protein S2
mm10_v2_chr7_+_97480928_97480966	0.00762907	Homez	ENSMUST00000026126.8|Ints4|ENSMUSG00000025133.8|integrator complex subunit 4
mm10_v2_chr2_-_176144697_176144697	0.0067863	Homez	ENSMUST00000178872.1|Gm2004|ENSMUSG00000095648.1|predicted gene 2004
mm10_v2_chr4_-_131937165_131937211	0.00625109	Homez	ENSMUST00000155990.1|Epb4.1|ENSMUSG00000028906.9|erythrocyte protein band 4.1
mm10_v2_chr11_+_77686155_77686179	0.0046513	Homez	ENSMUST00000100802.4|Nufip2|ENSMUSG00000037857.10|nuclear fragile X mental retardation protein interacting protein 2 	ENSMUST00000181023.1|Nufip2|ENSMUSG00000037857.10|nuclear fragile X mental retardation protein interacting protein 2
mm10_v2_chr17_+_24696234_24696320	0.00377492	Homez	ENSMUST00000019464.7|Noxo1|ENSMUSG00000019320.7|NADPH oxidase organizer 1
mm10_v2_chr16_-_4964168_4964237	0.00260055	Homez	ENSMUST00000023157.4|Anks3|ENSMUSG00000022515.5|ankyrin repeat and sterile alpha motif domain containing 3
mm10_v2_chrX_-_37878944_37879037	0.000445863	Homez	ENSMUST00000071885.6|Rhox8|ENSMUSG00000064137.6|reproductive homeobox 8
