mm10_v2_chr3_-_80802789_80802840	3.43894	Hoxa4	ENSMUST00000107745.1|Gria2|ENSMUSG00000033981.8|glutamate receptor, ionotropic, AMPA2 (alpha 2) 	ENSMUST00000075316.4|Gria2|ENSMUSG00000033981.8|glutamate receptor, ionotropic, AMPA2 (alpha 2)
mm10_v2_chr4_+_144892813_144892835	3.31899	Hoxa4	ENSMUST00000105744.1|Dhrs3|ENSMUSG00000066026.8|dehydrogenase/reductase (SDR family) member 3 	ENSMUST00000171001.1|Dhrs3|ENSMUSG00000066026.8|dehydrogenase/reductase (SDR family) member 3
mm10_v2_chr2_+_71528657_71528683	2.74785	Hoxa4	ENSMUST00000126400.1|Dlx1|ENSMUSG00000041911.3|distal-less homeobox 1
mm10_v2_chr4_+_144893077_144893103	2.6852	Hoxa4	ENSMUST00000154208.1|Dhrs3|ENSMUSG00000066026.8|dehydrogenase/reductase (SDR family) member 3
mm10_v2_chr18_-_31949571_31949636	2.57133	Hoxa4	ENSMUST00000064016.5|Gpr17|ENSMUSG00000052229.5|G protein-coupled receptor 17
mm10_v2_chr7_-_19699008_19699166	2.27107	Hoxa4	ENSMUST00000174355.1|Apoe|ENSMUSG00000002985.9|apolipoprotein E 	ENSMUST00000172983.1|Apoe|ENSMUSG00000002985.9|apolipoprotein E 	ENSMUST00000174710.1|Apoe|ENSMUSG00000002985.9|apolipoprotein E 	ENSMUST00000167646.2|Apoe|ENSMUSG00000002985.9|apolipoprotein E 	ENSMUST00000003066.9|Apoe|ENSMUSG00000002985.9|apolipoprotein E 	ENSMUST00000174064.1|Apoe|ENSMUSG00000002985.9|apolipoprotein E
mm10_v2_chr4_+_144893127_144893151	2.2473	Hoxa4	ENSMUST00000142808.1|Dhrs3|ENSMUSG00000066026.8|dehydrogenase/reductase (SDR family) member 3
mm10_v2_chr14_-_79771305_79771318	2.16643	Hoxa4	ENSMUST00000039568.5|Pcdh8|ENSMUSG00000036422.5|protocadherin 8
mm10_v2_chr4_+_119814495_119814526	2.00104	Hoxa4	ENSMUST00000106307.2|Hivep3|ENSMUSG00000028634.10|human immunodeficiency virus type I enhancer binding protein 3
mm10_v2_chr12_+_38780284_38780349	1.99486	Hoxa4	ENSMUST00000162563.1|Etv1|ENSMUSG00000004151.10|ets variant gene 1 	ENSMUST00000161164.1|Etv1|ENSMUSG00000004151.10|ets variant gene 1 	ENSMUST00000160996.1|Etv1|ENSMUSG00000004151.10|ets variant gene 1
mm10_v2_chr12_+_38780817_38780854	1.85847	Hoxa4	ENSMUST00000160856.1|Etv1|ENSMUSG00000004151.10|ets variant gene 1
mm10_v2_chr2_-_77519565_77519647	1.8332	Hoxa4	ENSMUST00000111830.2|Zfp385b|ENSMUSG00000027016.11|zinc finger protein 385B
mm10_v2_chr5_+_17574726_17574899	1.67946	Hoxa4	ENSMUST00000169603.1|Sema3c|ENSMUSG00000028780.7|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C
mm10_v2_chr2_+_70563435_70563461	1.6045	Hoxa4	ENSMUST00000123330.1|Gad1|ENSMUSG00000070880.4|glutamate decarboxylase 1
mm10_v2_chr3_+_86070915_86070915	1.43146	Hoxa4	ENSMUST00000182666.1|Sh3d19|ENSMUSG00000028082.7|SH3 domain protein D19
mm10_v2_chr2_+_170731807_170731920	1.40739	Hoxa4	ENSMUST00000029075.4|Dok5|ENSMUSG00000027560.4|docking protein 5
mm10_v2_chr2_-_65529275_65529404	1.29227	Hoxa4	ENSMUST00000126837.1|Scn3a|ENSMUSG00000057182.8|sodium channel, voltage-gated, type III, alpha
mm10_v2_chr5_-_122002340_122002368	1.28693	Hoxa4	ENSMUST00000134326.1|Cux2|ENSMUSG00000042589.12|cut-like homeobox 2
mm10_v2_chr14_-_30353468_30353535	1.25689	Hoxa4	ENSMUST00000112249.1|Cacna1d|ENSMUSG00000015968.10|calcium channel, voltage-dependent, L type, alpha 1D subunit
mm10_v2_chr11_+_57011945_57011956	1.25117	Hoxa4	ENSMUST00000094179.4|Gria1|ENSMUSG00000020524.10|glutamate receptor, ionotropic, AMPA1 (alpha 1)
mm10_v2_chr18_+_37489465_37489465	1.24778	Hoxa4	ENSMUST00000055949.2|Pcdhb18|ENSMUSG00000048347.4|protocadherin beta 18
mm10_v2_chr12_+_29528382_29528468	1.22462	Hoxa4	ENSMUST00000049784.9|Myt1l|ENSMUSG00000061911.8|myelin transcription factor 1-like
mm10_v2_chr11_+_57011798_57011827	1.20421	Hoxa4	ENSMUST00000036315.9|Gria1|ENSMUSG00000020524.10|glutamate receptor, ionotropic, AMPA1 (alpha 1)
mm10_v2_chr11_+_29463735_29463888	1.1804	Hoxa4	ENSMUST00000155854.1|Ccdc88a|ENSMUSG00000032740.10|coiled coil domain containing 88A
mm10_v2_chr2_+_65930117_65930190	1.15982	Hoxa4	ENSMUST00000176109.1|Csrnp3|ENSMUSG00000044647.10|cysteine-serine-rich nuclear protein 3
mm10_v2_chr19_-_57197435_57197460	1.12337	Hoxa4	ENSMUST00000111550.1|Ablim1|ENSMUSG00000025085.10|actin-binding LIM protein 1
mm10_v2_chrX_+_159840463_159840481	1.1043	Hoxa4	ENSMUST00000112451.1|Sh3kbp1|ENSMUSG00000040990.11|SH3-domain kinase binding protein 1 	ENSMUST00000112453.2|Sh3kbp1|ENSMUSG00000040990.11|SH3-domain kinase binding protein 1
mm10_v2_chr1_-_158356258_158356313	1.10369	Hoxa4	ENSMUST00000004133.8|Brinp2|ENSMUSG00000004031.8|bone morphogenic protein/retinoic acid inducible neural-specific 2
mm10_v2_chr19_-_57197377_57197417	1.03834	Hoxa4	ENSMUST00000111546.1|Ablim1|ENSMUSG00000025085.10|actin-binding LIM protein 1
mm10_v2_chrX_+_136822781_136822840	1.03591	Hoxa4	ENSMUST00000113085.1|Plp1|ENSMUSG00000031425.9|proteolipid protein (myelin) 1
mm10_v2_chr9_-_29412204_29412277	1.0313	Hoxa4	ENSMUST00000115237.1|Ntm|ENSMUSG00000059974.4|neurotrimin
mm10_v2_chr3_-_146682410_146682522	1.01762	Hoxa4	ENSMUST00000124931.1|Samd13|ENSMUSG00000048652.6|sterile alpha motif domain containing 13 	ENSMUST00000147113.1|Samd13|ENSMUSG00000048652.6|sterile alpha motif domain containing 13
mm10_v2_chr2_+_90885860_90885872	1.00735	Hoxa4	ENSMUST00000111466.2|C1qtnf4|ENSMUSG00000040794.5|C1q and tumor necrosis factor related protein 4
mm10_v2_chr12_+_38781093_38781129	1.00314	Hoxa4	ENSMUST00000161513.1|Etv1|ENSMUSG00000004151.10|ets variant gene 1
mm10_v2_chr13_-_117025505_117025541	0.983126	Hoxa4	ENSMUST00000022239.6|Parp8|ENSMUSG00000021725.8|poly (ADP-ribose) polymerase family, member 8
mm10_v2_chr13_+_42680565_42680623	0.96237	Hoxa4	ENSMUST00000128646.1|Phactr1|ENSMUSG00000054728.10|phosphatase and actin regulator 1
mm10_v2_chr15_-_77956658_77956723	0.935402	Hoxa4	ENSMUST00000117725.1|Foxred2|ENSMUSG00000016552.7|FAD-dependent oxidoreductase domain containing 2 	ENSMUST00000016696.6|Foxred2|ENSMUSG00000016552.7|FAD-dependent oxidoreductase domain containing 2
mm10_v2_chr19_-_57197496_57197536	0.922523	Hoxa4	ENSMUST00000111544.1|Ablim1|ENSMUSG00000025085.10|actin-binding LIM protein 1
mm10_v2_chr5_+_137030275_137030295	0.919253	Hoxa4	ENSMUST00000041543.8|Vgf|ENSMUSG00000037428.8|VGF nerve growth factor inducible
mm10_v2_chr16_-_76373827_76373852	0.900439	Hoxa4	ENSMUST00000121927.1|Nrip1|ENSMUSG00000048490.7|nuclear receptor interacting protein 1
mm10_v2_chr9_-_49798905_49798931	0.882618	Hoxa4	ENSMUST00000114476.2|Ncam1|ENSMUSG00000039542.9|neural cell adhesion molecule 1
mm10_v2_chr18_-_37178493_37178531	0.880234	Hoxa4	ENSMUST00000181887.1|Gm10544|ENSMUSG00000097430.1|predicted gene 10544 	ENSMUST00000180516.1|Gm10544|ENSMUSG00000097430.1|predicted gene 10544
mm10_v2_chr19_-_28967794_28967852	0.8788	Hoxa4	ENSMUST00000162110.1|4430402I18Rik|ENSMUSG00000064202.9|RIKEN cDNA 4430402I18 gene
mm10_v2_chr6_+_58833689_58833734	0.878294	Hoxa4	ENSMUST00000041401.8|Herc3|ENSMUSG00000029804.10|hect domain and RLD 3
mm10_v2_chr17_-_26886175_26886248	0.870028	Hoxa4	ENSMUST00000108741.2|Gm17382|ENSMUSG00000078838.2|predicted gene, 17382
mm10_v2_chr9_-_49798729_49798855	0.869341	Hoxa4	ENSMUST00000166811.2|Ncam1|ENSMUSG00000039542.9|neural cell adhesion molecule 1
mm10_v2_chr3_+_5218516_5218544	0.86132	Hoxa4	ENSMUST00000175866.1|Zfhx4|ENSMUSG00000025255.12|zinc finger homeodomain 4
mm10_v2_chr2_-_6884940_6884957	0.858623	Hoxa4	ENSMUST00000183091.1|Celf2|ENSMUSG00000002107.12|CUGBP, Elav-like family member 2 	ENSMUST00000182851.1|Celf2|ENSMUSG00000002107.12|CUGBP, Elav-like family member 2
mm10_v2_chr18_+_37435602_37435636	0.84279	Hoxa4	ENSMUST00000055495.5|Pcdhb12|ENSMUSG00000043458.5|protocadherin beta 12
mm10_v2_chr2_-_5676046_5676065	0.841193	Hoxa4	ENSMUST00000114987.3|Camk1d|ENSMUSG00000039145.10|calcium/calmodulin-dependent protein kinase ID
mm10_v2_chr19_-_57197556_57197631	0.839924	Hoxa4	ENSMUST00000099294.2|Ablim1|ENSMUSG00000025085.10|actin-binding LIM protein 1
mm10_v2_chr15_+_18818895_18818947	0.839727	Hoxa4	ENSMUST00000166873.2|Cdh10|ENSMUSG00000022321.9|cadherin 10
mm10_v2_chr1_-_180193475_180193492	0.838585	Hoxa4	ENSMUST00000160482.1|Adck3|ENSMUSG00000026489.7|aarF domain containing kinase 3 	ENSMUST00000170472.1|Adck3|ENSMUSG00000026489.7|aarF domain containing kinase 3
mm10_v2_chr15_-_99820072_99820154	0.837685	Hoxa4	ENSMUST00000109024.2|Lima1|ENSMUSG00000023022.7|LIM domain and actin binding 1
mm10_v2_chrX_+_136822671_136822780	0.832607	Hoxa4	ENSMUST00000033800.6|Plp1|ENSMUSG00000031425.9|proteolipid protein (myelin) 1
mm10_v2_chr3_+_5218589_5218614	0.826392	Hoxa4	ENSMUST00000177488.1|Zfhx4|ENSMUSG00000025255.12|zinc finger homeodomain 4
mm10_v2_chr3_+_5218546_5218561	0.811798	Hoxa4	ENSMUST00000026284.6|Zfhx4|ENSMUSG00000025255.12|zinc finger homeodomain 4
mm10_v2_chr1_-_130729249_130729260	0.798769	Hoxa4	ENSMUST00000171479.1|Pfkfb2|ENSMUSG00000026409.8|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2
mm10_v2_chr1_+_165788681_165788728	0.78991	Hoxa4	ENSMUST00000161971.1|Cd247|ENSMUSG00000005763.9|CD247 antigen 	ENSMUST00000178336.1|Cd247|ENSMUSG00000005763.9|CD247 antigen 	ENSMUST00000005907.5|Cd247|ENSMUSG00000005763.9|CD247 antigen 	ENSMUST00000027849.4|Cd247|ENSMUSG00000005763.9|CD247 antigen
mm10_v2_chr18_+_37355271_37355271	0.776606	Hoxa4	ENSMUST00000051163.1|Pcdhb8|ENSMUSG00000045876.3|protocadherin beta 8
mm10_v2_chr12_+_109546333_109546398	0.767546	Hoxa4	ENSMUST00000166636.2|Meg3|ENSMUSG00000021268.11|maternally expressed 3
mm10_v2_chrX_+_56454871_56454887	0.762232	Hoxa4	ENSMUST00000039374.2|Ddx26b|ENSMUSG00000035967.9|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B 	ENSMUST00000101553.2|Ddx26b|ENSMUSG00000035967.9|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B
mm10_v2_chr5_-_111761697_111761727	0.756755	Hoxa4	ENSMUST00000129146.1|E130006D01Rik|ENSMUSG00000085271.1|RIKEN cDNA E130006D01 gene 	ENSMUST00000137398.1|E130006D01Rik|ENSMUSG00000085271.1|RIKEN cDNA E130006D01 gene 	ENSMUST00000129065.1|E130006D01Rik|ENSMUSG00000085271.1|RIKEN cDNA E130006D01 gene
mm10_v2_chr3_-_122619442_122619553	0.747889	Hoxa4	ENSMUST00000162947.1|Fnbp1l|ENSMUSG00000039735.9|formin binding protein 1-like
mm10_v2_chr18_+_76059458_76059501	0.743909	Hoxa4	ENSMUST00000167921.1|Zbtb7c|ENSMUSG00000044646.8|zinc finger and BTB domain containing 7C
mm10_v2_chr17_+_39846958_39847059	0.742657	Hoxa4	ENSMUST00000182010.1|Gm26924|ENSMUSG00000098178.1|predicted gene, 26924
mm10_v2_chr10_+_39612934_39612934	0.731709	Hoxa4	ENSMUST00000019987.6|Traf3ip2|ENSMUSG00000019842.6|TRAF3 interacting protein 2
mm10_v2_chr1_+_165788746_165788769	0.729554	Hoxa4	ENSMUST00000161559.2|Cd247|ENSMUSG00000005763.9|CD247 antigen
mm10_v2_chr12_+_109546409_109546493	0.72911	Hoxa4	ENSMUST00000143847.1|Meg3|ENSMUSG00000021268.11|maternally expressed 3
mm10_v2_chr10_+_69534208_69534222	0.725254	Hoxa4	ENSMUST00000182439.1|Ank3|ENSMUSG00000069601.7|ankyrin 3, epithelial 	ENSMUST00000092434.5|Ank3|ENSMUSG00000069601.7|ankyrin 3, epithelial 	ENSMUST00000092432.5|Ank3|ENSMUSG00000069601.7|ankyrin 3, epithelial 	ENSMUST00000092431.5|Ank3|ENSMUSG00000069601.7|ankyrin 3, epithelial 	ENSMUST00000054167.8|Ank3|ENSMUSG00000069601.7|ankyrin 3, epithelial 	ENSMUST00000047061.6|Ank3|ENSMUSG00000069601.7|ankyrin 3, epithelial
mm10_v2_chr7_+_30121915_30122001	0.693956	Hoxa4	ENSMUST00000098596.3|Zfp382|ENSMUSG00000074220.3|zinc finger protein 382 	ENSMUST00000153792.1|Zfp382|ENSMUSG00000074220.3|zinc finger protein 382
mm10_v2_chr2_+_4400958_4400975	0.684075	Hoxa4	ENSMUST00000075767.7|Frmd4a|ENSMUSG00000026657.10|FERM domain containing 4A
mm10_v2_chr9_-_42399915_42399929	0.674167	Hoxa4	ENSMUST00000042190.7|Tecta|ENSMUSG00000037705.7|tectorin alpha
mm10_v2_chr17_+_45734506_45734630	0.674137	Hoxa4	ENSMUST00000180558.1|F630040K05Rik|ENSMUSG00000097727.1|RIKEN cDNA F630040K05 gene
mm10_v2_chr9_-_55919605_55919605	0.668554	Hoxa4	ENSMUST00000037408.8|Scaper|ENSMUSG00000034007.9|S phase cyclin A-associated protein in the ER
mm10_v2_chr12_+_65075582_65075617	0.658812	Hoxa4	ENSMUST00000058889.4|Fancm|ENSMUSG00000055884.7|Fanconi anemia, complementation group M
mm10_v2_chr17_-_43667015_43667163	0.650608	Hoxa4	ENSMUST00000024705.4|Slc25a27|ENSMUSG00000023912.9|solute carrier family 25, member 27
mm10_v2_chr10_-_128525859_128525880	0.64656	Hoxa4	ENSMUST00000026427.6|Esyt1|ENSMUSG00000025366.7|extended synaptotagmin-like protein 1
mm10_v2_chr8_-_84937347_84937367	0.642024	Hoxa4	ENSMUST00000109741.2|Mast1|ENSMUSG00000053693.10|microtubule associated serine/threonine kinase 1 	ENSMUST00000119820.1|Mast1|ENSMUSG00000053693.10|microtubule associated serine/threonine kinase 1
mm10_v2_chr2_-_6884975_6884996	0.636887	Hoxa4	ENSMUST00000114924.3|Celf2|ENSMUSG00000002107.12|CUGBP, Elav-like family member 2 	ENSMUST00000170438.1|Celf2|ENSMUSG00000002107.12|CUGBP, Elav-like family member 2 	ENSMUST00000114934.4|Celf2|ENSMUSG00000002107.12|CUGBP, Elav-like family member 2
mm10_v2_chr3_+_88965812_88965812	0.59082	Hoxa4	ENSMUST00000090933.4|Ash1l|ENSMUSG00000028053.7|ash1 (absent, small, or homeotic)-like (Drosophila)
mm10_v2_chr1_+_180101144_180101144	0.590544	Hoxa4	ENSMUST00000133890.1|Cdc42bpa|ENSMUSG00000026490.11|CDC42 binding protein kinase alpha
mm10_v2_chr7_+_34251038_34251038	0.580982	Hoxa4	ENSMUST00000105172.1|Gm6096|ENSMUSG00000078380.1|predicted gene 6096
mm10_v2_chr6_+_8949670_8949686	0.536141	Hoxa4	ENSMUST00000060369.3|Nxph1|ENSMUSG00000046178.3|neurexophilin 1
mm10_v2_chr5_+_76809964_76810010	0.535438	Hoxa4	ENSMUST00000120818.1|C530008M17Rik|ENSMUSG00000036377.12|RIKEN cDNA C530008M17 gene
mm10_v2_chr16_-_64786321_64786321	0.53426	Hoxa4	ENSMUST00000052588.4|Zfp654|ENSMUSG00000047141.4|zinc finger protein 654
mm10_v2_chr19_+_11965817_11965887	0.524476	Hoxa4	ENSMUST00000025590.9|Osbp|ENSMUSG00000024687.10|oxysterol binding protein
mm10_v2_chr1_-_165934900_165935036	0.511851	Hoxa4	ENSMUST00000069609.5|Pou2f1|ENSMUSG00000026565.12|POU domain, class 2, transcription factor 1 	ENSMUST00000111427.2|Pou2f1|ENSMUSG00000026565.12|POU domain, class 2, transcription factor 1 	ENSMUST00000111426.4|Pou2f1|ENSMUSG00000026565.12|POU domain, class 2, transcription factor 1
mm10_v2_chr1_+_19103022_19103043	0.507083	Hoxa4	ENSMUST00000037294.7|Tfap2d|ENSMUSG00000042596.7|transcription factor AP-2, delta
mm10_v2_chr7_+_64185459_64185601	0.49724	Hoxa4	ENSMUST00000177102.2|Trpm1|ENSMUSG00000030523.12|transient receptor potential cation channel, subfamily M, member 1 	ENSMUST00000107519.1|Trpm1|ENSMUSG00000030523.12|transient receptor potential cation channel, subfamily M, member 1 	ENSMUST00000137650.1|Trpm1|ENSMUSG00000030523.12|transient receptor potential cation channel, subfamily M, member 1 	ENSMUST00000032737.5|Trpm1|ENSMUSG00000030523.12|transient receptor potential cation channel, subfamily M, member 1 	ENSMUST00000107515.1|Trpm1|ENSMUSG00000030523.12|transient receptor potential cation channel, subfamily M, member 1 	ENSMUST00000144996.1|Trpm1|ENSMUSG00000030523.12|transient receptor potential cation channel, subfamily M, member 1
mm10_v2_chr1_-_152766281_152766319	0.491404	Hoxa4	ENSMUST00000111859.1|Rgl1|ENSMUSG00000026482.7|ral guanine nucleotide dissociation stimulator,-like 1 	ENSMUST00000148865.1|Rgl1|ENSMUSG00000026482.7|ral guanine nucleotide dissociation stimulator,-like 1
mm10_v2_chr15_+_62037986_62038061	0.487029	Hoxa4	ENSMUST00000182956.1|Pvt1|ENSMUSG00000097039.2|plasmacytoma variant translocation 1 	ENSMUST00000182075.1|Pvt1|ENSMUSG00000097039.2|plasmacytoma variant translocation 1 	ENSMUST00000180432.2|Pvt1|ENSMUSG00000097039.2|plasmacytoma variant translocation 1 	ENSMUST00000181416.2|Pvt1|ENSMUSG00000097039.2|plasmacytoma variant translocation 1 	ENSMUST00000181657.2|Pvt1|ENSMUSG00000097039.2|plasmacytoma variant translocation 1
mm10_v2_chr15_+_55307743_55307762	0.475111	Hoxa4	ENSMUST00000023053.5|Col14a1|ENSMUSG00000022371.9|collagen, type XIV, alpha 1 	ENSMUST00000110221.2|Col14a1|ENSMUSG00000022371.9|collagen, type XIV, alpha 1 	ENSMUST00000110217.3|Col14a1|ENSMUSG00000022371.9|collagen, type XIV, alpha 1
mm10_v2_chr13_-_107890059_107890073	0.473433	Hoxa4	ENSMUST00000105097.2|Zswim6|ENSMUSG00000032846.9|zinc finger SWIM-type containing 6
mm10_v2_chr15_-_37458523_37458581	0.471852	Hoxa4	ENSMUST00000116445.2|Ncald|ENSMUSG00000051359.8|neurocalcin delta
mm10_v2_chr5_+_64812336_64812350	0.468851	Hoxa4	ENSMUST00000166409.1|Klf3|ENSMUSG00000029178.8|Kruppel-like factor 3 (basic)
mm10_v2_chr18_+_37447641_37447674	0.467229	Hoxa4	ENSMUST00000052387.3|Pcdhb14|ENSMUSG00000044043.3|protocadherin beta 14
mm10_v2_chr12_-_84361802_84361838	0.465372	Hoxa4	ENSMUST00000021659.1|Fam161b|ENSMUSG00000021234.3|family with sequence similarity 161, member B 	ENSMUST00000065536.2|Fam161b|ENSMUSG00000021234.3|family with sequence similarity 161, member B
mm10_v2_chr7_+_79273201_79273270	0.450325	Hoxa4	ENSMUST00000037315.6|Abhd2|ENSMUSG00000039202.6|abhydrolase domain containing 2
mm10_v2_chr5_-_146220901_146220987	0.448972	Hoxa4	ENSMUST00000169407.2|Rnf6|ENSMUSG00000029634.9|ring finger protein (C3H2C3 type) 6 	ENSMUST00000161331.1|Rnf6|ENSMUSG00000029634.9|ring finger protein (C3H2C3 type) 6 	ENSMUST00000159074.2|Rnf6|ENSMUSG00000029634.9|ring finger protein (C3H2C3 type) 6 	ENSMUST00000067837.3|Rnf6|ENSMUSG00000029634.9|ring finger protein (C3H2C3 type) 6
mm10_v2_chr6_-_77979515_77979622	0.439283	Hoxa4	ENSMUST00000159626.1|Ctnna2|ENSMUSG00000063063.6|catenin (cadherin associated protein), alpha 2 	ENSMUST00000075340.5|Ctnna2|ENSMUSG00000063063.6|catenin (cadherin associated protein), alpha 2 	ENSMUST00000162273.1|Ctnna2|ENSMUSG00000063063.6|catenin (cadherin associated protein), alpha 2
mm10_v2_chr10_+_53337686_53337724	0.438364	Hoxa4	ENSMUST00000046221.6|Pln|ENSMUSG00000038583.6|phospholamban 	ENSMUST00000163319.1|Pln|ENSMUSG00000038583.6|phospholamban
mm10_v2_chr15_-_37459327_37459380	0.429046	Hoxa4	ENSMUST00000119730.1|Ncald|ENSMUSG00000051359.8|neurocalcin delta 	ENSMUST00000120746.1|Ncald|ENSMUSG00000051359.8|neurocalcin delta
mm10_v2_chr8_+_4238733_4238767	0.424938	Hoxa4	ENSMUST00000110998.2|Map2k7|ENSMUSG00000002948.12|mitogen-activated protein kinase kinase 7 	ENSMUST00000062686.4|Map2k7|ENSMUSG00000002948.12|mitogen-activated protein kinase kinase 7
mm10_v2_chr12_+_38783455_38783482	0.422623	Hoxa4	ENSMUST00000161980.1|Etv1|ENSMUSG00000004151.10|ets variant gene 1 	ENSMUST00000160701.1|Etv1|ENSMUSG00000004151.10|ets variant gene 1
mm10_v2_chr9_+_72274966_72275013	0.417899	Hoxa4	ENSMUST00000183410.1|Zfp280d|ENSMUSG00000038535.11|zinc finger protein 280D
mm10_v2_chr18_+_37341702_37341728	0.417376	Hoxa4	ENSMUST00000053037.3|Pcdhb7|ENSMUSG00000045062.3|protocadherin beta 7
mm10_v2_chr17_-_71459300_71459300	0.415835	Hoxa4	ENSMUST00000183937.1|Gm4707|ENSMUSG00000091831.4|predicted gene 4707
mm10_v2_chr3_+_68572245_68572392	0.406042	Hoxa4	ENSMUST00000170788.2|Schip1|ENSMUSG00000027777.9|schwannomin interacting protein 1
mm10_v2_chr3_-_146781351_146781431	0.401264	Hoxa4	ENSMUST00000005164.7|Prkacb|ENSMUSG00000005034.9|protein kinase, cAMP dependent, catalytic, beta
mm10_v2_chr8_+_4238815_4238886	0.391743	Hoxa4	ENSMUST00000003027.7|Map2k7|ENSMUSG00000002948.12|mitogen-activated protein kinase kinase 7 	ENSMUST00000110999.1|Map2k7|ENSMUSG00000002948.12|mitogen-activated protein kinase kinase 7
mm10_v2_chr10_-_70655934_70655972	0.378811	Hoxa4	ENSMUST00000162144.1|Phyhipl|ENSMUSG00000037747.3|phytanoyl-CoA hydroxylase interacting protein-like 	ENSMUST00000162793.1|Phyhipl|ENSMUSG00000037747.3|phytanoyl-CoA hydroxylase interacting protein-like
mm10_v2_chr10_-_127121125_127121160	0.378519	Hoxa4	ENSMUST00000164259.1|Os9|ENSMUSG00000040462.6|amplified in osteosarcoma 	ENSMUST00000080975.4|Os9|ENSMUSG00000040462.6|amplified in osteosarcoma
mm10_v2_chr12_+_38783503_38783527	0.374687	Hoxa4	ENSMUST00000159334.1|Etv1|ENSMUSG00000004151.10|ets variant gene 1
mm10_v2_chr6_+_86527312_86527401	0.373977	Hoxa4	ENSMUST00000181928.1|1600020E01Rik|ENSMUSG00000097048.1|RIKEN cDNA 1600020E01 gene
mm10_v2_chr4_+_138775735_138775784	0.365231	Hoxa4	ENSMUST00000030528.2|Pla2g2d|ENSMUSG00000041202.6|phospholipase A2, group IID
mm10_v2_chr13_+_58807884_58807902	0.363194	Hoxa4	ENSMUST00000079828.5|Ntrk2|ENSMUSG00000055254.8|neurotrophic tyrosine kinase, receptor, type 2
mm10_v2_chr3_+_95164306_95164374	0.355747	Hoxa4	ENSMUST00000107217.1|Sema6c|ENSMUSG00000038777.13|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C 	ENSMUST00000168321.1|Sema6c|ENSMUSG00000038777.13|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C
mm10_v2_chr1_-_67038824_67038872	0.339226	Hoxa4	ENSMUST00000119559.1|Lancl1|ENSMUSG00000026000.10|LanC (bacterial lantibiotic synthetase component C)-like 1 	ENSMUST00000149996.1|Lancl1|ENSMUSG00000026000.10|LanC (bacterial lantibiotic synthetase component C)-like 1 	ENSMUST00000027149.5|Lancl1|ENSMUSG00000026000.10|LanC (bacterial lantibiotic synthetase component C)-like 1 	ENSMUST00000113979.3|Lancl1|ENSMUSG00000026000.10|LanC (bacterial lantibiotic synthetase component C)-like 1
mm10_v2_chr18_+_23752333_23752401	0.338219	Hoxa4	ENSMUST00000170802.1|Mapre2|ENSMUSG00000024277.8|microtubule-associated protein, RP/EB family, member 2 	ENSMUST00000155708.1|Mapre2|ENSMUSG00000024277.8|microtubule-associated protein, RP/EB family, member 2 	ENSMUST00000118826.2|Mapre2|ENSMUSG00000024277.8|microtubule-associated protein, RP/EB family, member 2
mm10_v2_chr18_+_37819543_37819570	0.330513	Hoxa4	ENSMUST00000055935.5|Pcdhga9|ENSMUSG00000023036.8|protocadherin gamma subfamily A, 9
mm10_v2_chr16_+_10812915_10812915	0.318477	Hoxa4	ENSMUST00000115822.1|Gm11172|ENSMUSG00000079740.1|predicted gene 11172
mm10_v2_chr16_+_4639941_4639978	0.294719	Hoxa4	ENSMUST00000038770.3|Vasn|ENSMUSG00000039646.5|vasorin
mm10_v2_chr14_-_108914237_108914257	0.294207	Hoxa4	ENSMUST00000100322.2|Slitrk1|ENSMUSG00000075478.2|SLIT and NTRK-like family, member 1
mm10_v2_chr18_-_79109391_79109510	0.290932	Hoxa4	ENSMUST00000025430.8|Setbp1|ENSMUSG00000024548.9|SET binding protein 1 	ENSMUST00000161465.2|Setbp1|ENSMUSG00000024548.9|SET binding protein 1
mm10_v2_chr11_-_121673103_121673153	0.287921	Hoxa4	ENSMUST00000067399.7|B3gntl1|ENSMUSG00000046605.8|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1 	ENSMUST00000062654.7|B3gntl1|ENSMUSG00000046605.8|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1
mm10_v2_chr7_+_112742025_112742060	0.276194	Hoxa4	ENSMUST00000164363.1|Tead1|ENSMUSG00000055320.10|TEA domain family member 1
mm10_v2_chr12_-_27160311_27160476	0.267644	Hoxa4	ENSMUST00000182473.1|Gm9866|ENSMUSG00000094002.2|predicted gene 9866 	ENSMUST00000177636.1|Gm9866|ENSMUSG00000094002.2|predicted gene 9866 	ENSMUST00000183238.1|Gm9866|ENSMUSG00000094002.2|predicted gene 9866
mm10_v2_chr13_+_23555023_23555039	0.266646	Hoxa4	ENSMUST00000045301.6|Hist1h1d|ENSMUSG00000052565.5|histone cluster 1, H1d
mm10_v2_chr12_+_84362029_84362064	0.2658	Hoxa4	ENSMUST00000110278.1|Coq6|ENSMUSG00000021235.7|coenzyme Q6 homolog (yeast) 	ENSMUST00000145522.1|Coq6|ENSMUSG00000021235.7|coenzyme Q6 homolog (yeast)
mm10_v2_chr19_+_8840519_8840549	0.260246	Hoxa4	ENSMUST00000086058.6|Bscl2|ENSMUSG00000071657.6|Bernardinelli-Seip congenital lipodystrophy 2 homolog (human)
mm10_v2_chr2_-_93849679_93849836	0.259177	Hoxa4	ENSMUST00000068513.4|Accs|ENSMUSG00000040272.8|1-aminocyclopropane-1-carboxylate synthase (non-functional) 	ENSMUST00000041593.8|Accs|ENSMUSG00000040272.8|1-aminocyclopropane-1-carboxylate synthase (non-functional) 	ENSMUST00000130077.1|Accs|ENSMUSG00000040272.8|1-aminocyclopropane-1-carboxylate synthase (non-functional)
mm10_v2_chr11_-_30268169_30268191	0.251446	Hoxa4	ENSMUST00000006629.7|Sptbn1|ENSMUSG00000020315.12|spectrin beta, non-erythrocytic 1
mm10_v2_chr1_-_152766323_152766352	0.250569	Hoxa4	ENSMUST00000111857.1|Rgl1|ENSMUSG00000026482.7|ral guanine nucleotide dissociation stimulator,-like 1
mm10_v2_chr2_-_116065798_116065853	0.245515	Hoxa4	ENSMUST00000110907.1|Meis2|ENSMUSG00000027210.14|Meis homeobox 2 	ENSMUST00000110908.2|Meis2|ENSMUSG00000027210.14|Meis homeobox 2
mm10_v2_chr3_+_116562965_116563004	0.243818	Hoxa4	ENSMUST00000029573.5|Lrrc39|ENSMUSG00000027961.5|leucine rich repeat containing 39
mm10_v2_chr5_-_84417359_84417389	0.242273	Hoxa4	ENSMUST00000113401.1|Epha5|ENSMUSG00000029245.10|Eph receptor A5
mm10_v2_chr1_+_180111339_180111339	0.24018	Hoxa4	ENSMUST00000145181.1|Cdc42bpa|ENSMUSG00000026490.11|CDC42 binding protein kinase alpha
mm10_v2_chr18_+_37307445_37307462	0.237369	Hoxa4	ENSMUST00000056712.2|Pcdhb4|ENSMUSG00000045689.2|protocadherin beta 4
mm10_v2_chr5_-_124187150_124187225	0.237223	Hoxa4	ENSMUST00000161938.1|Pitpnm2|ENSMUSG00000029406.9|phosphatidylinositol transfer protein, membrane-associated 2
mm10_v2_chr14_+_65266701_65266752	0.23254	Hoxa4	ENSMUST00000169656.1|Fbxo16|ENSMUSG00000034532.8|F-box protein 16
mm10_v2_chr2_+_83644435_83644490	0.231274	Hoxa4	ENSMUST00000081591.6|Zc3h15|ENSMUSG00000027091.8|zinc finger CCCH-type containing 15
mm10_v2_chr5_+_30814722_30814776	0.230407	Hoxa4	ENSMUST00000114724.1|Mapre3|ENSMUSG00000029166.8|microtubule-associated protein, RP/EB family, member 3
mm10_v2_chr3_+_94837533_94837567	0.230342	Hoxa4	ENSMUST00000107270.2|Pogz|ENSMUSG00000038902.8|pogo transposable element with ZNF domain
mm10_v2_chr12_+_84361968_84362018	0.21958	Hoxa4	ENSMUST00000021661.6|Coq6|ENSMUSG00000021235.7|coenzyme Q6 homolog (yeast)
mm10_v2_chr3_+_94837702_94837723	0.218378	Hoxa4	ENSMUST00000107266.1|Pogz|ENSMUSG00000038902.8|pogo transposable element with ZNF domain 	ENSMUST00000042402.5|Pogz|ENSMUSG00000038902.8|pogo transposable element with ZNF domain 	ENSMUST00000107269.1|Pogz|ENSMUSG00000038902.8|pogo transposable element with ZNF domain
mm10_v2_chr18_-_42579652_42579790	0.214458	Hoxa4	ENSMUST00000054738.3|Gpr151|ENSMUSG00000042816.3|G protein-coupled receptor 151
mm10_v2_chr4_-_129378116_129378116	0.212052	Hoxa4	ENSMUST00000030610.2|Zbtb8a|ENSMUSG00000028807.2|zinc finger and BTB domain containing 8a
mm10_v2_chr7_-_100855403_100855440	0.2117	Hoxa4	ENSMUST00000156855.1|Relt|ENSMUSG00000008318.3|RELT tumor necrosis factor receptor
mm10_v2_chr6_+_124304646_124304671	0.19297	Hoxa4	ENSMUST00000112541.2|Cd163|ENSMUSG00000008845.3|CD163 antigen 	ENSMUST00000032234.2|Cd163|ENSMUSG00000008845.3|CD163 antigen
mm10_v2_chr8_-_67974567_67974596	0.189535	Hoxa4	ENSMUST00000098696.3|Psd3|ENSMUSG00000030465.12|pleckstrin and Sec7 domain containing 3 	ENSMUST00000038959.9|Psd3|ENSMUSG00000030465.12|pleckstrin and Sec7 domain containing 3 	ENSMUST00000093469.4|Psd3|ENSMUSG00000030465.12|pleckstrin and Sec7 domain containing 3
mm10_v2_chrX_-_20950597_20950613	0.187474	Hoxa4	ENSMUST00000009550.7|Elk1|ENSMUSG00000009406.7|ELK1, member of ETS oncogene family
mm10_v2_chr1_+_93478964_93479108	0.180483	Hoxa4	ENSMUST00000027495.8|Sept2|ENSMUSG00000026276.11|septin 2 	ENSMUST00000136182.1|Sept2|ENSMUSG00000026276.11|septin 2 	ENSMUST00000131175.2|Sept2|ENSMUSG00000026276.11|septin 2 	ENSMUST00000179353.1|Sept2|ENSMUSG00000026276.11|septin 2 	ENSMUST00000172165.1|Sept2|ENSMUSG00000026276.11|septin 2 	ENSMUST00000153826.1|Sept2|ENSMUSG00000026276.11|septin 2 	ENSMUST00000129211.1|Sept2|ENSMUSG00000026276.11|septin 2 	ENSMUST00000168776.1|Sept2|ENSMUSG00000026276.11|septin 2 	ENSMUST00000112912.1|Sept2|ENSMUSG00000026276.11|septin 2
mm10_v2_chr9_-_50555170_50555183	0.17136	Hoxa4	ENSMUST00000119103.1|Bco2|ENSMUSG00000032066.9|beta-carotene oxygenase 2
mm10_v2_chr4_+_130107556_130107606	0.169355	Hoxa4	ENSMUST00000030563.5|Pef1|ENSMUSG00000028779.10|penta-EF hand domain containing 1
mm10_v2_chr4_-_118179946_118180035	0.166562	Hoxa4	ENSMUST00000050288.8|Kdm4a|ENSMUSG00000033326.9|lysine (K)-specific demethylase 4A 	ENSMUST00000106403.1|Kdm4a|ENSMUSG00000033326.9|lysine (K)-specific demethylase 4A
mm10_v2_chr11_-_30986326_30986372	0.165705	Hoxa4	ENSMUST00000020553.4|Chac2|ENSMUSG00000020309.6|ChaC, cation transport regulator 2 	ENSMUST00000101394.4|Chac2|ENSMUSG00000020309.6|ChaC, cation transport regulator 2
mm10_v2_chr4_-_118180043_118180054	0.165061	Hoxa4	ENSMUST00000106406.2|Kdm4a|ENSMUSG00000033326.9|lysine (K)-specific demethylase 4A
mm10_v2_chr17_+_24850654_24850683	0.161881	Hoxa4	ENSMUST00000130989.1|Hagh|ENSMUSG00000024158.11|hydroxyacyl glutathione hydrolase 	ENSMUST00000024974.9|Hagh|ENSMUSG00000024158.11|hydroxyacyl glutathione hydrolase
mm10_v2_chr12_+_84361636_84361657	0.154614	Hoxa4	ENSMUST00000110276.1|Coq6|ENSMUSG00000021235.7|coenzyme Q6 homolog (yeast)
mm10_v2_chr6_-_56901870_56901891	0.153495	Hoxa4	ENSMUST00000101367.2|Nt5c3|ENSMUSG00000029780.8|5'-nucleotidase, cytosolic III
mm10_v2_chr6_+_29467718_29467764	0.15045	Hoxa4	ENSMUST00000004396.6|Atp6v1f|ENSMUSG00000004285.6|ATPase, H+ transporting, lysosomal V1 subunit F
mm10_v2_chr2_-_116065047_116065133	0.147899	Hoxa4	ENSMUST00000028639.6|Meis2|ENSMUSG00000027210.14|Meis homeobox 2 	ENSMUST00000102538.4|Meis2|ENSMUSG00000027210.14|Meis homeobox 2
mm10_v2_chr17_+_24850515_24850591	0.147428	Hoxa4	ENSMUST00000154363.1|Hagh|ENSMUSG00000024158.11|hydroxyacyl glutathione hydrolase 	ENSMUST00000169200.1|Hagh|ENSMUSG00000024158.11|hydroxyacyl glutathione hydrolase
mm10_v2_chr8_+_46986913_46986962	0.143596	Hoxa4	ENSMUST00000039840.7|Enpp6|ENSMUSG00000038173.8|ectonucleotide pyrophosphatase/phosphodiesterase 6 	ENSMUST00000119686.1|Enpp6|ENSMUSG00000038173.8|ectonucleotide pyrophosphatase/phosphodiesterase 6
mm10_v2_chr12_+_84996309_84996419	0.14026	Hoxa4	ENSMUST00000168977.1|Ylpm1|ENSMUSG00000021244.9|YLP motif containing 1 	ENSMUST00000021670.8|Ylpm1|ENSMUSG00000021244.9|YLP motif containing 1
mm10_v2_chr10_+_87859062_87859094	0.133632	Hoxa4	ENSMUST00000095360.4|Igf1|ENSMUSG00000020053.12|insulin-like growth factor 1
mm10_v2_chr9_+_75775355_75775378	0.12738	Hoxa4	ENSMUST00000012281.7|Bmp5|ENSMUSG00000032179.7|bone morphogenetic protein 5
mm10_v2_chr9_-_110624361_110624439	0.121312	Hoxa4	ENSMUST00000035069.9|Nradd|ENSMUSG00000032491.10|neurotrophin receptor associated death domain
mm10_v2_chr8_+_47713266_47713266	0.111934	Hoxa4	ENSMUST00000180928.1|E030037K01Rik|ENSMUSG00000097706.1|RIKEN cDNA E030037K01 gene
mm10_v2_chr6_+_124916863_124916863	0.108705	Hoxa4	ENSMUST00000069553.2|A230083G16Rik|ENSMUSG00000055818.2|RIKEN cDNA A230083G16 gene
mm10_v2_chrX_+_140367494_140367494	0.0930818	Hoxa4	ENSMUST00000141660.1|Frmpd3|ENSMUSG00000042425.11|FERM and PDZ domain containing 3
mm10_v2_chr13_+_38204928_38204962	0.0916097	Hoxa4	ENSMUST00000091641.5|Snrnp48|ENSMUSG00000021431.8|small nuclear ribonucleoprotein 48 (U11/U12) 	ENSMUST00000178564.1|Snrnp48|ENSMUSG00000021431.8|small nuclear ribonucleoprotein 48 (U11/U12)
mm10_v2_chr1_+_165301863_165301863	0.0813665	Hoxa4	ENSMUST00000178700.1|Gpr161|ENSMUSG00000040836.9|G protein-coupled receptor 161
mm10_v2_chr16_-_22857514_22857576	0.0785902	Hoxa4	ENSMUST00000004576.6|Tbccd1|ENSMUSG00000004462.6|TBCC domain containing 1
mm10_v2_chr13_+_63014934_63014934	0.0697822	Hoxa4	ENSMUST00000091560.4|2010111I01Rik|ENSMUSG00000021458.10|RIKEN cDNA 2010111I01 gene
mm10_v2_chr15_-_56694525_56694554	0.0522398	Hoxa4	ENSMUST00000050544.7|Has2|ENSMUSG00000022367.7|hyaluronan synthase 2
mm10_v2_chr10_+_127420334_127420348	0.0422643	Hoxa4	ENSMUST00000171434.1|R3hdm2|ENSMUSG00000025404.9|R3H domain containing 2
mm10_v2_chr4_-_62519885_62519967	0.0369566	Hoxa4	ENSMUST00000107444.1|Alad|ENSMUSG00000028393.4|aminolevulinate, delta-, dehydratase 	ENSMUST00000030090.3|Alad|ENSMUSG00000028393.4|aminolevulinate, delta-, dehydratase
mm10_v2_chr6_+_63255971_63256036	0.0342088	Hoxa4	ENSMUST00000159561.1|Grid2|ENSMUSG00000071424.3|glutamate receptor, ionotropic, delta 2 	ENSMUST00000095852.3|Grid2|ENSMUSG00000071424.3|glutamate receptor, ionotropic, delta 2
mm10_v2_chr1_-_74601345_74601402	0.0302167	Hoxa4	ENSMUST00000136078.1|Rnf25|ENSMUSG00000026171.6|ring finger protein 25 	ENSMUST00000132081.1|Rnf25|ENSMUSG00000026171.6|ring finger protein 25 	ENSMUST00000113721.1|Rnf25|ENSMUSG00000026171.6|ring finger protein 25 	ENSMUST00000027357.5|Rnf25|ENSMUSG00000026171.6|ring finger protein 25
mm10_v2_chr9_+_44398176_44398176	0.0290368	Hoxa4	ENSMUST00000165839.1|Slc37a4|ENSMUSG00000032114.8|solute carrier family 37 (glucose-6-phosphate transporter), member 4
mm10_v2_chr12_-_80760541_80760730	0.0225307	Hoxa4	ENSMUST00000073251.6|Ccdc177|ENSMUSG00000062961.6|coiled-coil domain containing 177
mm10_v2_chr2_+_109917639_109917656	0.0189773	Hoxa4	ENSMUST00000046548.7|Lgr4|ENSMUSG00000050199.7|leucine-rich repeat-containing G protein-coupled receptor 4 	ENSMUST00000111037.2|Lgr4|ENSMUSG00000050199.7|leucine-rich repeat-containing G protein-coupled receptor 4
mm10_v2_chr1_+_143739573_143739642	0.0127597	Hoxa4	ENSMUST00000111957.3|Glrx2|ENSMUSG00000018196.12|glutaredoxin 2 (thioltransferase) 	ENSMUST00000145571.1|Glrx2|ENSMUSG00000018196.12|glutaredoxin 2 (thioltransferase)
mm10_v2_chr9_-_65885024_65885069	0.0119898	Hoxa4	ENSMUST00000122410.1|Trip4|ENSMUSG00000032386.9|thyroid hormone receptor interactor 4 	ENSMUST00000117083.1|Trip4|ENSMUSG00000032386.9|thyroid hormone receptor interactor 4
mm10_v2_chr19_-_38224096_38224183	0.0108729	Hoxa4	ENSMUST00000067167.5|Fra10ac1|ENSMUSG00000054237.5|FRA10AC1 homolog (human)
mm10_v2_chrX_+_48623737_48623790	0.00921361	Hoxa4	ENSMUST00000114936.1|Slc25a14|ENSMUSG00000031105.10|solute carrier family 25 (mitochondrial carrier, brain), member 14
mm10_v2_chr6_-_102464667_102464667	0.00836025	Hoxa4	ENSMUST00000032159.6|Cntn3|ENSMUSG00000030075.8|contactin 3
