mm10_v2_chr9_+_119063429_119063467	1.37796	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000141185.1|Vill|ENSMUSG00000038775.8|villin-like 	ENSMUST00000126251.1|Vill|ENSMUSG00000038775.8|villin-like 	ENSMUST00000136561.1|Vill|ENSMUSG00000038775.8|villin-like
mm10_v2_chr17_-_48432723_48432741	1.04133	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000046549.3|Apobec2|ENSMUSG00000040694.3|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 2
mm10_v2_chr10_-_37138863_37138937	0.719446	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000092584.5|Marcks|ENSMUSG00000069662.5|myristoylated alanine rich protein kinase C substrate
mm10_v2_chr2_-_168767136_168767201	0.707043	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000029061.5|Sall4|ENSMUSG00000027547.11|sal-like 4 (Drosophila) 	ENSMUST00000103074.1|Sall4|ENSMUSG00000027547.11|sal-like 4 (Drosophila)
mm10_v2_chr2_-_168767029_168767104	0.637921	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000075044.3|Sall4|ENSMUSG00000027547.11|sal-like 4 (Drosophila)
mm10_v2_chr8_-_21906412_21906437	0.629468	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000051965.4|Defb11|ENSMUSG00000045337.4|defensin beta 11
mm10_v2_chr13_-_58354862_58354862	0.542444	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000043605.5|Kif27|ENSMUSG00000060176.3|kinesin family member 27
mm10_v2_chr4_+_145585166_145585211	0.53216	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000105739.1|Gm13212|ENSMUSG00000078502.4|predicted gene 13212 	ENSMUST00000119718.1|Gm13212|ENSMUSG00000078502.4|predicted gene 13212
mm10_v2_chr2_+_20737306_20737321	0.527906	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000114606.1|Etl4|ENSMUSG00000036617.10|enhancer trap locus 4 	ENSMUST00000114608.1|Etl4|ENSMUSG00000036617.10|enhancer trap locus 4
mm10_v2_chr2_-_33718789_33718899	0.486801	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000130532.1|9430024E24Rik|ENSMUSG00000085463.1|RIKEN cDNA 9430024E24 gene
mm10_v2_chr10_+_97482350_97482372	0.457836	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000163448.2|Dcn|ENSMUSG00000019929.9|decorin
mm10_v2_chrX_-_60893430_60893440	0.455316	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000135107.2|Sox3|ENSMUSG00000045179.8|SRY-box containing gene 3
mm10_v2_chr4_+_105789869_105789869	0.429541	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000184254.1|Gm12728|ENSMUSG00000083780.2|predicted gene 12728
mm10_v2_chr11_+_59306920_59306935	0.401222	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000000128.3|Wnt9a|ENSMUSG00000000126.5|wingless-type MMTV integration site 9A 	ENSMUST00000108783.3|Wnt9a|ENSMUSG00000000126.5|wingless-type MMTV integration site 9A
mm10_v2_chr14_+_58893465_58893506	0.385491	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000079960.1|Rpl13-ps3|ENSMUSG00000059835.1|ribosomal protein L13, pseudogene 3
mm10_v2_chr11_+_58171648_58171688	0.345193	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000020820.1|Mrpl22|ENSMUSG00000020514.2|mitochondrial ribosomal protein L22
mm10_v2_chr6_-_115037824_115037881	0.327274	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000174848.1|Tamm41|ENSMUSG00000030316.7|TAM41, mitochondrial translocator assembly and maintenance protein, homolog (S. cerevisiae) 	ENSMUST00000032461.5|Tamm41|ENSMUSG00000030316.7|TAM41, mitochondrial translocator assembly and maintenance protein, homolog (S. cerevisiae)
mm10_v2_chr2_-_105017015_105017080	0.310701	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000111110.2|Eif3m|ENSMUSG00000027170.6|eukaryotic translation initiation factor 3, subunit M 	ENSMUST00000028592.5|Eif3m|ENSMUSG00000027170.6|eukaryotic translation initiation factor 3, subunit M
mm10_v2_chr15_+_16778101_16778101	0.306951	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000026432.6|Cdh9|ENSMUSG00000025370.6|cadherin 9
mm10_v2_chr17_+_34969912_34969912	0.288197	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000173680.1|Gm20481|ENSMUSG00000092609.1|predicted gene 20481
mm10_v2_chr19_-_29334646_29334670	0.279396	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000044143.5|Rln1|ENSMUSG00000039097.5|relaxin 1
mm10_v2_chr5_-_43981757_43981773	0.278832	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000061299.7|Fgfbp1|ENSMUSG00000048373.7|fibroblast growth factor binding protein 1
mm10_v2_chr5_-_3647806_3648009	0.273081	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000119783.1|Gatad1|ENSMUSG00000007415.9|GATA zinc finger domain containing 1 	ENSMUST00000007559.8|Gatad1|ENSMUSG00000007415.9|GATA zinc finger domain containing 1
mm10_v2_chr10_+_37139558_37139558	0.269999	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000062667.3|5930403N24Rik|ENSMUSG00000046463.3|RIKEN cDNA 5930403N24 gene
mm10_v2_chr4_-_147809788_147809840	0.237745	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000105734.3|Gm13157|ENSMUSG00000078495.4|predicted gene 13157 	ENSMUST00000176201.1|Gm20707|ENSMUSG00000093594.1|predicted gene 20707
mm10_v2_chr17_+_82539258_82539258	0.231037	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000097278.3|Gm6594|ENSMUSG00000073371.3|predicted pseudogene 6594
mm10_v2_chr11_+_109543694_109543754	0.230437	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000106696.1|Arsg|ENSMUSG00000020604.7|arylsulfatase G
mm10_v2_chr6_-_124779686_124779742	0.229179	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000147669.1|Lrrc23|ENSMUSG00000030125.5|leucine rich repeat containing 23 	ENSMUST00000128697.1|Lrrc23|ENSMUSG00000030125.5|leucine rich repeat containing 23 	ENSMUST00000032218.3|Lrrc23|ENSMUSG00000030125.5|leucine rich repeat containing 23 	ENSMUST00000112475.2|Lrrc23|ENSMUSG00000030125.5|leucine rich repeat containing 23
mm10_v2_chr8_-_4779513_4779591	0.225462	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000022945.7|Shcbp1|ENSMUSG00000022322.7|Shc SH2-domain binding protein 1
mm10_v2_chr15_-_64922290_64922315	0.225383	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000023007.5|Adcy8|ENSMUSG00000022376.7|adenylate cyclase 8
mm10_v2_chr9_+_72806874_72806874	0.216942	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000055535.8|Prtg|ENSMUSG00000036030.9|protogenin homolog (Gallus gallus)
mm10_v2_chr4_+_147132038_147132038	0.2102	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000084149.3|Gm13139|ENSMUSG00000067916.3|predicted gene 13139
mm10_v2_chr2_-_174346712_174346712	0.207148	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000168292.1|Gm20721|ENSMUSG00000090625.1|predicted gene, 20721
mm10_v2_chrX_-_134111852_134111873	0.202738	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000033610.6|Nox1|ENSMUSG00000031257.8|NADPH oxidase 1
mm10_v2_chr2_+_125136692_125136769	0.201325	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000099452.2|Ctxn2|ENSMUSG00000074872.2|cortexin 2
mm10_v2_chr2_-_144270852_144270906	0.200423	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000110030.3|Snx5|ENSMUSG00000027423.9|sorting nexin 5
mm10_v2_chr13_-_100786402_100786570	0.1978	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000174038.1|Ccnb1|ENSMUSG00000041431.10|cyclin B1 	ENSMUST00000091295.7|Ccnb1|ENSMUSG00000041431.10|cyclin B1 	ENSMUST00000072119.8|Ccnb1|ENSMUSG00000041431.10|cyclin B1
mm10_v2_chr4_+_116596672_116596730	0.192292	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000051869.7|Ccdc17|ENSMUSG00000034035.12|coiled-coil domain containing 17
mm10_v2_chr8_-_61902669_61902713	0.187607	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000121785.1|Palld|ENSMUSG00000058056.9|palladin, cytoskeletal associated protein 	ENSMUST00000034057.7|Palld|ENSMUSG00000058056.9|palladin, cytoskeletal associated protein
mm10_v2_chrX_+_106015699_106015759	0.187469	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000033582.4|Cox7b|ENSMUSG00000031231.4|cytochrome c oxidase subunit VIIb
mm10_v2_chr4_-_136602641_136602760	0.186247	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000105847.1|Kdm1a|ENSMUSG00000036940.9|lysine (K)-specific demethylase 1A 	ENSMUST00000116273.2|Kdm1a|ENSMUSG00000036940.9|lysine (K)-specific demethylase 1A
mm10_v2_chr7_+_100159241_100159315	0.180485	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000032967.3|Lipt2|ENSMUSG00000030725.3|lipoyl(octanoyl) transferase 2 (putative)
mm10_v2_chr1_-_72284248_72284314	0.170795	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000097698.4|Pecr|ENSMUSG00000026189.7|peroxisomal trans-2-enoyl-CoA reductase 	ENSMUST00000027381.6|Pecr|ENSMUSG00000026189.7|peroxisomal trans-2-enoyl-CoA reductase
mm10_v2_chr17_-_26099257_26099259	0.170545	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000053575.3|Gm8186|ENSMUSG00000049124.3|predicted gene 8186
mm10_v2_chr19_+_55895508_55895511	0.170237	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000111646.1|Tcf7l2|ENSMUSG00000024985.12|transcription factor 7 like 2, T cell specific, HMG box
mm10_v2_chrM_+_2743_2761	0.166214	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000082392.1|mt-Nd1|ENSMUSG00000064341.1|mitochondrially encoded NADH dehydrogenase 1
mm10_v2_chr10_-_77166545_77166556	0.164586	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000081654.6|Col18a1|ENSMUSG00000001435.8|collagen, type XVIII, alpha 1
mm10_v2_chr4_+_15881255_15881272	0.164265	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000029876.1|Calb1|ENSMUSG00000028222.2|calbindin 1
mm10_v2_chr4_+_43493345_43493430	0.16369	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000030181.5|Ccdc107|ENSMUSG00000028461.6|coiled-coil domain containing 107 	ENSMUST00000107922.2|Ccdc107|ENSMUSG00000028461.6|coiled-coil domain containing 107
mm10_v2_chr18_+_86711059_86711110	0.160981	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000068423.3|Cbln2|ENSMUSG00000024647.8|cerebellin 2 precursor protein
mm10_v2_chr3_+_55782500_55782521	0.160972	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000075422.4|Mab21l1|ENSMUSG00000056947.4|mab-21-like 1 (C. elegans)
mm10_v2_chr14_-_15438974_15439002	0.156855	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000055211.4|Lrrc3b|ENSMUSG00000045201.5|leucine rich repeat containing 3B
mm10_v2_chrX_-_160138375_160138435	0.156188	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000033662.8|Pdha1|ENSMUSG00000031299.10|pyruvate dehydrogenase E1 alpha 1
mm10_v2_chr2_+_174450678_174450708	0.155519	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000016399.5|Tubb1|ENSMUSG00000016255.5|tubulin, beta 1 class VI
mm10_v2_chr18_+_86711520_86711650	0.13989	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000122464.1|Cbln2|ENSMUSG00000024647.8|cerebellin 2 precursor protein
mm10_v2_chr12_-_80643799_80643857	0.138857	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000166931.1|Erh|ENSMUSG00000021131.7|enhancer of rudimentary homolog (Drosophila)
mm10_v2_chr4_+_136172367_136172395	0.136437	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000061721.5|E2f2|ENSMUSG00000018983.9|E2F transcription factor 2
mm10_v2_chr17_+_34592248_34592329	0.132854	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000038149.6|Pbx2|ENSMUSG00000034673.8|pre B cell leukemia homeobox 2
mm10_v2_chr14_-_6411578_6411578	0.131166	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000179312.1|Gm3591|ENSMUSG00000096904.1|predicted gene 3591
mm10_v2_chr13_+_23533869_23533906	0.129311	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000073261.2|Hist1h2af|ENSMUSG00000061991.2|histone cluster 1, H2af
mm10_v2_chr15_-_55548164_55548164	0.12919	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000165356.1|Mrpl13|ENSMUSG00000022370.7|mitochondrial ribosomal protein L13
mm10_v2_chr10_+_116143881_116143903	0.122819	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000105271.2|Ptprr|ENSMUSG00000020151.10|protein tyrosine phosphatase, receptor type, R
mm10_v2_chr12_+_10390756_10390836	0.120926	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000020947.5|Rdh14|ENSMUSG00000020621.5|retinol dehydrogenase 14 (all-trans and 9-cis)
mm10_v2_chr2_+_144270900_144271055	0.118299	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000028910.2|Mgme1|ENSMUSG00000027424.5|mitochondrial genome maintainance exonuclease 1 	ENSMUST00000110027.1|Mgme1|ENSMUSG00000027424.5|mitochondrial genome maintainance exonuclease 1
mm10_v2_chr1_-_4880669_4880699	0.116402	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000078030.3|Gm6104|ENSMUSG00000062588.3|predicted gene 6104
mm10_v2_chr14_-_6741430_6741430	0.115701	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000100904.4|Gm3636|ENSMUSG00000091754.2|predicted gene 3636
mm10_v2_chr19_-_41933276_41933319	0.115359	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000075280.4|Exosc1|ENSMUSG00000034321.7|exosome component 1 	ENSMUST00000112123.2|Exosc1|ENSMUSG00000034321.7|exosome component 1
mm10_v2_chr2_+_126556128_126556128	0.112335	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000141482.2|Slc27a2|ENSMUSG00000027359.10|solute carrier family 27 (fatty acid transporter), member 2
mm10_v2_chr17_-_74323896_74323954	0.111753	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000164832.1|Dpy30|ENSMUSG00000024067.7|dpy-30 homolog (C. elegans)
mm10_v2_chrM_+_7005_7022	0.109406	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000082405.1|mt-Co2|ENSMUSG00000064354.1|mitochondrially encoded cytochrome c oxidase II
mm10_v2_chr11_-_99230998_99231019	0.108593	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000103133.3|Smarce1|ENSMUSG00000037935.10|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1
mm10_v2_chr1_+_161070767_161070767	0.107377	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000111618.1|Cenpl|ENSMUSG00000026708.10|centromere protein L 	ENSMUST00000111620.3|Cenpl|ENSMUSG00000026708.10|centromere protein L 	ENSMUST00000028035.7|Cenpl|ENSMUSG00000026708.10|centromere protein L
mm10_v2_chr8_-_109251698_109251728	0.107116	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000079189.3|4922502B01Rik|ENSMUSG00000057387.3|RIKEN cDNA 4922502B01 gene
mm10_v2_chr4_+_145510759_145510791	0.105787	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000105742.1|Gm13225|ENSMUSG00000078503.3|predicted gene 13225 	ENSMUST00000136309.1|Gm13225|ENSMUSG00000078503.3|predicted gene 13225
mm10_v2_chr15_+_34453285_34453312	0.101274	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000060894.7|BC030476|ENSMUSG00000044726.7|cDNA sequence BC030476
mm10_v2_chr17_+_36958623_36958641	0.101088	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000173814.1|Znrd1as|ENSMUSG00000036214.7|Znrd1 antisense
mm10_v2_chrM_+_8600_8616	0.101055	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000082409.1|mt-Co3|ENSMUSG00000064358.1|mitochondrially encoded cytochrome c oxidase III
mm10_v2_chr9_-_55512156_55512243	0.100797	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000034866.8|Etfa|ENSMUSG00000032314.8|electron transferring flavoprotein, alpha polypeptide
mm10_v2_chrX_-_23266751_23266806	0.0995888	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000115316.2|Klhl13|ENSMUSG00000036782.7|kelch-like 13
mm10_v2_chrM_-_14060_14074	0.0995389	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000082419.1|mt-Nd6|ENSMUSG00000064368.1|mitochondrially encoded NADH dehydrogenase 6
mm10_v2_chr5_-_62765618_62765656	0.0990164	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000159470.1|Arap2|ENSMUSG00000037999.9|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2
mm10_v2_chr9_+_108339048_108339080	0.0980697	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000082429.5|Gpx1|ENSMUSG00000063856.6|glutathione peroxidase 1
mm10_v2_chr3_+_121291725_121291817	0.0958869	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000039442.7|Alg14|ENSMUSG00000039887.7|asparagine-linked glycosylation 14
mm10_v2_chr13_-_102906046_102906111	0.094639	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000171791.1|Mast4|ENSMUSG00000034751.9|microtubule associated serine/threonine kinase family member 4
mm10_v2_chr7_-_38019505_38019552	0.0945593	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000085513.4|Uri1|ENSMUSG00000030421.8|URI1, prefoldin-like chaperone
mm10_v2_chr14_+_4514758_4514758	0.0914623	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000112776.2|Gm3173|ENSMUSG00000079386.2|predicted gene 3173
mm10_v2_chr13_-_81710937_81711013	0.0908123	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000161920.1|Polr3g|ENSMUSG00000035834.5|polymerase (RNA) III (DNA directed) polypeptide G 	ENSMUST00000048993.5|Polr3g|ENSMUSG00000035834.5|polymerase (RNA) III (DNA directed) polypeptide G
mm10_v2_chr1_-_172027269_172027313	0.0895744	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000027837.6|Vangl2|ENSMUSG00000026556.9|vang-like 2 (van gogh, Drosophila) 	ENSMUST00000111264.1|Vangl2|ENSMUSG00000026556.9|vang-like 2 (van gogh, Drosophila)
mm10_v2_chrX_+_170009892_170009892	0.0889261	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000180251.1|Gm21887|ENSMUSG00000095562.1|predicted gene, 21887
mm10_v2_chr12_+_112760652_112760659	0.0883744	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000063888.3|Pld4|ENSMUSG00000052160.6|phospholipase D family, member 4
mm10_v2_chr17_-_36958437_36958500	0.0880124	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000113669.2|Znrd1|ENSMUSG00000036315.7|zinc ribbon domain containing, 1
mm10_v2_chr3_+_94372794_94372872	0.0864363	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000029795.3|Rorc|ENSMUSG00000028150.8|RAR-related orphan receptor gamma
mm10_v2_chrM_+_10167_10167	0.0862696	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000082414.1|mt-Nd4|ENSMUSG00000064363.1|mitochondrially encoded NADH dehydrogenase 4
mm10_v2_chr14_+_4198185_4198185	0.0854893	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000180184.1|Gm2974|ENSMUSG00000079391.4|predicted gene 2974
mm10_v2_chr2_-_131160006_131160081	0.0852107	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000103188.3|1700037H04Rik|ENSMUSG00000027327.10|RIKEN cDNA 1700037H04 gene 	ENSMUST00000133602.1|1700037H04Rik|ENSMUSG00000027327.10|RIKEN cDNA 1700037H04 gene 	ENSMUST00000028800.5|1700037H04Rik|ENSMUSG00000027327.10|RIKEN cDNA 1700037H04 gene
mm10_v2_chr9_-_89705017_89705068	0.0847348	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000058488.6|Tmed3|ENSMUSG00000032353.7|transmembrane emp24 domain containing 3
mm10_v2_chr8_-_84662841_84662859	0.0841628	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000060427.4|Ier2|ENSMUSG00000053560.4|immediate early response 2
mm10_v2_chr5_+_3543812_3543853	0.0823203	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000115527.3|Fam133b|ENSMUSG00000058503.7|family with sequence similarity 133, member B
mm10_v2_chrM_+_14138_14154	0.0818323	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000082421.1|mt-Cytb|ENSMUSG00000064370.1|mitochondrially encoded cytochrome b
mm10_v2_chr5_+_92809372_92809436	0.0811735	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000113054.2|Shroom3|ENSMUSG00000029381.9|shroom family member 3
mm10_v2_chr12_+_3954943_3954957	0.0807698	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000020990.5|Pomc|ENSMUSG00000020660.5|pro-opiomelanocortin-alpha
mm10_v2_chr2_-_150255591_150255591	0.0805286	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000063463.5|Gm21994|ENSMUSG00000074735.2|predicted gene 21994
mm10_v2_chr8_-_106573461_106573462	0.0781188	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000073722.5|Gm10073|ENSMUSG00000060019.5|predicted pseudogene 10073
mm10_v2_chr17_-_56036546_56036647	0.0778398	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000003268.9|Sh3gl1|ENSMUSG00000003200.9|SH3-domain GRB2-like 1
mm10_v2_chr15_-_79774408_79774474	0.0733041	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000023055.6|Dnal4|ENSMUSG00000022420.9|dynein, axonemal, light chain 4
mm10_v2_chr8_+_23411490_23411507	0.0730536	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000033952.7|Sfrp1|ENSMUSG00000031548.7|secreted frizzled-related protein 1
mm10_v2_chr4_-_132345686_132345708	0.0729619	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000030726.6|Rcc1|ENSMUSG00000028896.7|regulator of chromosome condensation 1
mm10_v2_chr2_+_109917639_109917656	0.0729451	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000046548.7|Lgr4|ENSMUSG00000050199.7|leucine-rich repeat-containing G protein-coupled receptor 4 	ENSMUST00000111037.2|Lgr4|ENSMUSG00000050199.7|leucine-rich repeat-containing G protein-coupled receptor 4
mm10_v2_chr15_-_79774383_79774394	0.0725311	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000069877.5|Dnal4|ENSMUSG00000022420.9|dynein, axonemal, light chain 4
mm10_v2_chr14_+_5517172_5517172	0.0724626	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000178220.1|Gm3488|ENSMUSG00000095295.2|predicted gene, 3488
mm10_v2_chr14_+_5164535_5164535	0.0724626	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000179659.1|Gm3317|ENSMUSG00000095912.1|predicted gene 3317
mm10_v2_chr14_-_7473073_7473073	0.0722476	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000167833.2|Gm3752|ENSMUSG00000091617.2|predicted gene 3752
mm10_v2_chr16_-_42340595_42340651	0.0718803	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000102817.4|Gap43|ENSMUSG00000047261.9|growth associated protein 43
mm10_v2_chr14_-_19569553_19569553	0.0717454	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000112595.2|Gm2237|ENSMUSG00000093979.1|predicted gene 2237
mm10_v2_chr4_-_132345715_132345747	0.071706	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000084250.4|Rcc1|ENSMUSG00000028896.7|regulator of chromosome condensation 1
mm10_v2_chr18_-_43477764_43477836	0.0709116	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000057110.9|Eif3j2|ENSMUSG00000043424.9|eukaryotic translation initiation factor 3, subunit J2
mm10_v2_chr3_+_40800778_40800786	0.070268	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000169566.1|Plk4|ENSMUSG00000025758.5|polo-like kinase 4
mm10_v2_chr14_-_45388772_45388836	0.0701989	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000046191.7|Gnpnat1|ENSMUSG00000037722.7|glucosamine-phosphate N-acetyltransferase 1
mm10_v2_chr12_-_12940600_12940616	0.0697222	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000130990.1|Mycn|ENSMUSG00000037169.8|v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian)
mm10_v2_chr15_-_9140374_9140451	0.0696334	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000096482.3|Skp2|ENSMUSG00000054115.5|S-phase kinase-associated protein 2 (p45) 	ENSMUST00000110585.2|Skp2|ENSMUSG00000054115.5|S-phase kinase-associated protein 2 (p45)
mm10_v2_chr17_+_34305883_34305909	0.0696062	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000074557.8|H2-Eb1|ENSMUSG00000060586.9|histocompatibility 2, class II antigen E beta
mm10_v2_chr17_-_43543639_43543639	0.069322	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000178772.1|Ankrd66|ENSMUSG00000096140.1|ankyrin repeat domain 66
mm10_v2_chr13_+_90089705_90089762	0.0683443	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000012566.8|Tmem167|ENSMUSG00000012422.8|transmembrane protein 167
mm10_v2_chr6_+_34029421_34029456	0.0678421	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000070189.3|Lrguk|ENSMUSG00000056215.6|leucine-rich repeats and guanylate kinase domain containing 	ENSMUST00000101564.2|Lrguk|ENSMUSG00000056215.6|leucine-rich repeats and guanylate kinase domain containing
mm10_v2_chr14_+_3667518_3667518	0.0661219	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000112801.3|Gm3020|ENSMUSG00000079402.3|predicted gene 3020
mm10_v2_chr17_-_36958533_36958554	0.0659088	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000172518.1|Znrd1|ENSMUSG00000036315.7|zinc ribbon domain containing, 1
mm10_v2_chr14_+_3348089_3348089	0.0656214	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000178722.1|Gm2956|ENSMUSG00000096574.1|predicted gene 2956
mm10_v2_chr14_+_4741737_4741737	0.0646016	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000178748.1|Gm3252|ENSMUSG00000094628.1|predicted gene 3252
mm10_v2_chr14_-_6874257_6874257	0.064173	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000179374.1|Gm3629|ENSMUSG00000093898.1|predicted gene 3629 	ENSMUST00000178298.1|Gm3667|ENSMUSG00000090691.2|predicted gene 3667
mm10_v2_chr18_-_56975333_56975376	0.0637773	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000139243.2|C330018D20Rik|ENSMUSG00000024592.9|RIKEN cDNA C330018D20 gene 	ENSMUST00000025488.8|C330018D20Rik|ENSMUSG00000024592.9|RIKEN cDNA C330018D20 gene
mm10_v2_chr14_+_4430992_4430992	0.0636579	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000164603.1|Gm3173|ENSMUSG00000079386.2|predicted gene 3173 	ENSMUST00000166848.1|Gm3173|ENSMUSG00000079386.2|predicted gene 3173
mm10_v2_chr9_+_35559460_35559493	0.0634912	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000034615.3|Pus3|ENSMUSG00000032103.4|pseudouridine synthase 3 	ENSMUST00000121246.1|Pus3|ENSMUSG00000032103.4|pseudouridine synthase 3
mm10_v2_chr14_+_3428103_3428103	0.0634589	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000178060.1|Gm3005|ENSMUSG00000095195.1|predicted gene 3005
mm10_v2_chr7_+_126976338_126976400	0.0629299	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000032920.3|Cdipt|ENSMUSG00000030682.3|CDP-diacylglycerol--inositol 3-phosphatidyltransferase (phosphatidylinositol synthase)
mm10_v2_chr12_-_113361232_113361232	0.0625797	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000103423.1|Ighg3|ENSMUSG00000076615.2|Immunoglobulin heavy constant gamma 3
mm10_v2_chr4_+_32623985_32624084	0.0612801	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000108178.1|Casp8ap2|ENSMUSG00000028282.6|caspase 8 associated protein 2
mm10_v2_chr10_-_88605017_88605152	0.0611553	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000119185.1|Mybpc1|ENSMUSG00000020061.11|myosin binding protein C, slow-type 	ENSMUST00000121629.1|Mybpc1|ENSMUSG00000020061.11|myosin binding protein C, slow-type
mm10_v2_chr17_+_36958571_36958611	0.0605649	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000040177.6|Znrd1as|ENSMUSG00000036214.7|Znrd1 antisense
mm10_v2_chr14_+_4871156_4871156	0.058915	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000166410.2|Gm3264|ENSMUSG00000094132.1|predicted gene 3264
mm10_v2_chr14_+_4665094_4665094	0.0569036	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000169675.2|Gm3239|ENSMUSG00000090872.2|predicted gene 3239
mm10_v2_chr9_+_76014855_76015055	0.0568282	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000008052.6|Hmgcll1|ENSMUSG00000007908.8|3-hydroxymethyl-3-methylglutaryl-Coenzyme A lyase-like 1 	ENSMUST00000183425.1|Hmgcll1|ENSMUSG00000007908.8|3-hydroxymethyl-3-methylglutaryl-Coenzyme A lyase-like 1 	ENSMUST00000183979.1|Hmgcll1|ENSMUSG00000007908.8|3-hydroxymethyl-3-methylglutaryl-Coenzyme A lyase-like 1 	ENSMUST00000117981.2|Hmgcll1|ENSMUSG00000007908.8|3-hydroxymethyl-3-methylglutaryl-Coenzyme A lyase-like 1
mm10_v2_chr18_-_40219324_40219399	0.055597	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000025364.4|Yipf5|ENSMUSG00000024487.4|Yip1 domain family, member 5
mm10_v2_chrX_-_153037549_153037581	0.0551032	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000051484.3|Mageh1|ENSMUSG00000047238.3|melanoma antigen, family H, 1
mm10_v2_chr4_-_129227883_129227923	0.0546994	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000106051.1|C77080|ENSMUSG00000050390.6|expressed sequence C77080
mm10_v2_chr7_+_38183217_38183278	0.0546943	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000165308.1|1600014C10Rik|ENSMUSG00000054676.9|RIKEN cDNA 1600014C10 gene
mm10_v2_chr3_+_138374121_138374163	0.0543947	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000171054.1|Adh6-ps1|ENSMUSG00000090306.1|alcohol dehydrogenase 6 (class V), pseudogene 1
mm10_v2_chr11_-_4095344_4095445	0.0534503	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000004868.5|Mtfp1|ENSMUSG00000004748.5|mitochondrial fission process 1
mm10_v2_chr3_-_67515487_67515523	0.0525306	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000178314.1|Rarres1|ENSMUSG00000049404.5|retinoic acid receptor responder (tazarotene induced) 1 	ENSMUST00000054825.4|Rarres1|ENSMUSG00000049404.5|retinoic acid receptor responder (tazarotene induced) 1
mm10_v2_chr2_+_163658370_163658510	0.0524337	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000164399.1|Pkig|ENSMUSG00000035268.8|protein kinase inhibitor, gamma 	ENSMUST00000064703.6|Pkig|ENSMUSG00000035268.8|protein kinase inhibitor, gamma 	ENSMUST00000099105.2|Pkig|ENSMUSG00000035268.8|protein kinase inhibitor, gamma 	ENSMUST00000152418.1|Pkig|ENSMUSG00000035268.8|protein kinase inhibitor, gamma 	ENSMUST00000126182.1|Pkig|ENSMUSG00000035268.8|protein kinase inhibitor, gamma 	ENSMUST00000131228.1|Pkig|ENSMUSG00000035268.8|protein kinase inhibitor, gamma
mm10_v2_chr5_-_138170992_138171033	0.052118	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000139983.1|Mcm7|ENSMUSG00000029730.10|minichromosome maintenance deficient 7 (S. cerevisiae)
mm10_v2_chr14_-_6266620_6266620	0.0517085	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000096172.5|Gm3411|ENSMUSG00000079396.3|predicted gene 3411
mm10_v2_chr11_+_17257558_17257688	0.0512549	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000000594.2|C1d|ENSMUSG00000000581.2|C1D nuclear receptor co-repressor 	ENSMUST00000156784.1|C1d|ENSMUSG00000000581.2|C1D nuclear receptor co-repressor
mm10_v2_chrX_-_139871637_139871677	0.050052	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000033811.7|Morc4|ENSMUSG00000031434.9|microrchidia 4 	ENSMUST00000087401.5|Morc4|ENSMUSG00000031434.9|microrchidia 4
mm10_v2_chr13_+_67863324_67863328	0.0482432	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000078471.5|BC048507|ENSMUSG00000064063.5|cDNA sequence BC048507
mm10_v2_chr12_+_72441933_72441970	0.0482251	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000161284.1|Lrrc9|ENSMUSG00000021090.9|leucine rich repeat containing 9
mm10_v2_chr10_-_128626464_128626520	0.0473874	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000026420.5|Rps26|ENSMUSG00000025362.5|ribosomal protein S26
mm10_v2_chr3_-_57294880_57294899	0.0460601	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000171384.1|Tm4sf1|ENSMUSG00000027800.8|transmembrane 4 superfamily member 1
mm10_v2_chr4_+_95557494_95557544	0.0454485	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000079223.4|Fggy|ENSMUSG00000028573.12|FGGY carbohydrate kinase domain containing 	ENSMUST00000177394.1|Fggy|ENSMUSG00000028573.12|FGGY carbohydrate kinase domain containing
mm10_v2_chr5_+_135994796_135994884	0.0441089	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000111142.2|Dtx2|ENSMUSG00000004947.9|deltex 2 homolog (Drosophila) 	ENSMUST00000111145.3|Dtx2|ENSMUSG00000004947.9|deltex 2 homolog (Drosophila) 	ENSMUST00000111144.1|Dtx2|ENSMUSG00000004947.9|deltex 2 homolog (Drosophila) 	ENSMUST00000005072.3|Dtx2|ENSMUSG00000004947.9|deltex 2 homolog (Drosophila) 	ENSMUST00000130345.1|Dtx2|ENSMUSG00000004947.9|deltex 2 homolog (Drosophila)
mm10_v2_chr10_-_76110956_76110962	0.0437203	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000120757.1|Slc5a4b|ENSMUSG00000020226.9|solute carrier family 5 (neutral amino acid transporters, system A), member 4b
mm10_v2_chr12_+_72441852_72441866	0.043688	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000162159.1|Lrrc9|ENSMUSG00000021090.9|leucine rich repeat containing 9
mm10_v2_chr2_+_32606946_32606973	0.0436875	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000113290.1|St6galnac6|ENSMUSG00000026811.12|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6
mm10_v2_chr13_-_102905740_102905814	0.043116	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000167462.1|Mast4|ENSMUSG00000034751.9|microtubule associated serine/threonine kinase family member 4
mm10_v2_chr16_+_58408443_58408523	0.0426248	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000046663.7|Dcbld2|ENSMUSG00000035107.7|discoidin, CUB and LCCL domain containing 2
mm10_v2_chr7_-_45830776_45830944	0.041945	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000107723.2|Grwd1|ENSMUSG00000053801.10|glutamate-rich WD repeat containing 1 	ENSMUST00000131384.1|Grwd1|ENSMUSG00000053801.10|glutamate-rich WD repeat containing 1
mm10_v2_chr10_-_33951190_33951263	0.0418051	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000048222.4|Zufsp|ENSMUSG00000039531.7|zinc finger with UFM1-specific peptidase domain
mm10_v2_chr10_+_63024512_63024512	0.0414574	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000020262.4|Pbld2|ENSMUSG00000020068.4|phenazine biosynthesis-like protein domain containing 2
mm10_v2_chr1_-_174921813_174921827	0.0411414	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000055294.3|Grem2|ENSMUSG00000050069.3|gremlin 2 homolog, cysteine knot superfamily (Xenopus laevis)
mm10_v2_chr1_+_24177610_24177711	0.0409646	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000054588.8|Col9a1|ENSMUSG00000026147.10|collagen, type IX, alpha 1
mm10_v2_chr14_+_3825596_3825596	0.0406529	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000178256.1|Gm3002|ENSMUSG00000096793.1|predicted gene 3002
mm10_v2_chr11_+_87664274_87664274	0.0399869	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000092800.5|Rnf43|ENSMUSG00000034177.9|ring finger protein 43
mm10_v2_chr12_-_84617326_84617466	0.0396843	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000021666.4|Abcd4|ENSMUSG00000021240.5|ATP-binding cassette, sub-family D (ALD), member 4
mm10_v2_chr14_+_4126066_4126066	0.0391117	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000167397.2|Gm8108|ENSMUSG00000091563.2|predicted gene 8108
mm10_v2_chr6_+_37870786_37870882	0.0390051	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000120428.1|Trim24|ENSMUSG00000029833.11|tripartite motif-containing 24 	ENSMUST00000031859.7|Trim24|ENSMUSG00000029833.11|tripartite motif-containing 24
mm10_v2_chr14_+_24490678_24490689	0.0388613	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000169826.1|Rps24|ENSMUSG00000025290.10|ribosomal protein S24 	ENSMUST00000112384.3|Rps24|ENSMUSG00000025290.10|ribosomal protein S24
mm10_v2_chr17_+_29274078_29274129	0.038446	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000149405.2|BC004004|ENSMUSG00000052712.10|cDNA sequence BC004004
mm10_v2_chr9_-_123678873_123678885	0.0381719	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000040960.6|Slc6a20a|ENSMUSG00000036814.6|solute carrier family 6 (neurotransmitter transporter), member 20A
mm10_v2_chr7_+_127233227_127233317	0.0375105	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000056232.6|Zfp553|ENSMUSG00000045598.9|zinc finger protein 553
mm10_v2_chr1_+_165461037_165461037	0.0368455	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000027853.5|Mpc2|ENSMUSG00000026568.5|mitochondrial pyruvate carrier 2
mm10_v2_chr5_-_121527186_121527258	0.0366931	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000152270.1|Mapkapk5|ENSMUSG00000029454.9|MAP kinase-activated protein kinase 5
mm10_v2_chr15_+_38661904_38661981	0.034658	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000022904.6|Atp6v1c1|ENSMUSG00000022295.7|ATPase, H+ transporting, lysosomal V1 subunit C1
mm10_v2_chr1_-_89933290_89933290	0.0341389	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000036954.7|Gbx2|ENSMUSG00000034486.7|gastrulation brain homeobox 2
mm10_v2_chr7_-_29155717_29155730	0.033925	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000153251.1|Fam98c|ENSMUSG00000030590.8|family with sequence similarity 98, member C
mm10_v2_chr16_-_64771146_64771184	0.0334885	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000076991.6|4930453N24Rik|ENSMUSG00000059920.9|RIKEN cDNA 4930453N24 gene
mm10_v2_chr18_+_60774675_60774686	0.0334036	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000118551.1|Rps14|ENSMUSG00000024608.4|ribosomal protein S14
mm10_v2_chr4_-_117682233_117682279	0.0330454	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000102687.3|Dmap1|ENSMUSG00000009640.5|DNA methyltransferase 1-associated protein 1
mm10_v2_chr6_-_136941494_136941505	0.0310337	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000111892.1|Arhgdib|ENSMUSG00000030220.7|Rho, GDP dissociation inhibitor (GDI) beta
mm10_v2_chr4_+_127243784_127243856	0.0300716	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000142029.1|Smim12|ENSMUSG00000042380.8|small integral membrane protein 12
mm10_v2_chr2_+_152669461_152669539	0.0296305	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000125366.1|H13|ENSMUSG00000019188.10|histocompatibility 13 	ENSMUST00000109825.1|H13|ENSMUSG00000019188.10|histocompatibility 13 	ENSMUST00000089059.2|H13|ENSMUSG00000019188.10|histocompatibility 13 	ENSMUST00000079247.3|H13|ENSMUSG00000019188.10|histocompatibility 13
mm10_v2_chr11_+_6560183_6560240	0.0285337	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000109722.2|Ccm2|ENSMUSG00000000378.9|cerebral cavernous malformation 2
mm10_v2_chr2_+_91257323_91257371	0.0279235	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000111349.2|Pacsin3|ENSMUSG00000027257.7|protein kinase C and casein kinase substrate in neurons 3 	ENSMUST00000131711.1|Pacsin3|ENSMUSG00000027257.7|protein kinase C and casein kinase substrate in neurons 3
mm10_v2_chr12_-_55302974_55303014	0.027521	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000021410.8|Ppp2r3c|ENSMUSG00000021022.8|protein phosphatase 2, regulatory subunit B'', gamma
mm10_v2_chr1_+_63176818_63176919	0.0274046	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000129339.1|Eef1b2|ENSMUSG00000025967.10|eukaryotic translation elongation factor 1 beta 2
mm10_v2_chr2_+_36230426_36230491	0.0271983	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000062069.5|Ptgs1|ENSMUSG00000047250.7|prostaglandin-endoperoxide synthase 1
mm10_v2_chr4_-_45532470_45532470	0.0267911	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000147448.1|Shb|ENSMUSG00000044813.9|src homology 2 domain-containing transforming protein B
mm10_v2_chr7_+_130774069_130774185	0.0263651	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000048453.5|Btbd16|ENSMUSG00000040298.5|BTB (POZ) domain containing 16
mm10_v2_chr1_-_161070613_161070674	0.0259626	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000035430.3|Dars2|ENSMUSG00000026709.4|aspartyl-tRNA synthetase 2 (mitochondrial)
mm10_v2_chr9_+_53771499_53771535	0.0258307	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000048670.8|Slc35f2|ENSMUSG00000042195.8|solute carrier family 35, member F2
mm10_v2_chr9_-_123678782_123678850	0.024749	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000170591.1|Slc6a20a|ENSMUSG00000036814.6|solute carrier family 6 (neurotransmitter transporter), member 20A 	ENSMUST00000171647.1|Slc6a20a|ENSMUSG00000036814.6|solute carrier family 6 (neurotransmitter transporter), member 20A
mm10_v2_chr3_-_87174657_87174747	0.0244535	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000159976.1|Kirrel|ENSMUSG00000041734.9|kin of IRRE like (Drosophila) 	ENSMUST00000107618.2|Kirrel|ENSMUSG00000041734.9|kin of IRRE like (Drosophila)
mm10_v2_chr3_-_39359128_39359160	0.0243493	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000056409.2|Gm9845|ENSMUSG00000050533.2|predicted pseudogene 9845
mm10_v2_chr5_-_92348871_92348889	0.0241949	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000038816.6|Cxcl10|ENSMUSG00000034855.7|chemokine (C-X-C motif) ligand 10 	ENSMUST00000118006.1|Cxcl10|ENSMUSG00000034855.7|chemokine (C-X-C motif) ligand 10
mm10_v2_chr13_+_59585259_59585441	0.023699	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000168367.1|Naa35|ENSMUSG00000021555.8|N(alpha)-acetyltransferase 35, NatC auxiliary subunit 	ENSMUST00000022038.7|Naa35|ENSMUSG00000021555.8|N(alpha)-acetyltransferase 35, NatC auxiliary subunit 	ENSMUST00000166923.1|Naa35|ENSMUSG00000021555.8|N(alpha)-acetyltransferase 35, NatC auxiliary subunit
mm10_v2_chr8_+_107031218_107031229	0.0235533	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000034388.9|Vps4a|ENSMUSG00000031913.9|vacuolar protein sorting 4a (yeast)
mm10_v2_chr15_+_9436028_9436083	0.0229165	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000042360.3|Capsl|ENSMUSG00000039676.3|calcyphosine-like
mm10_v2_chr5_-_34660068_34660148	0.0228534	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000041364.9|Nop14|ENSMUSG00000036693.9|NOP14 nucleolar protein
mm10_v2_chr9_-_20959785_20959888	0.0217178	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000177754.1|Dnmt1|ENSMUSG00000004099.9|DNA methyltransferase (cytosine-5) 1
mm10_v2_chr2_-_71367749_71367797	0.0215205	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000151937.1|Slc25a12|ENSMUSG00000027010.10|solute carrier family 25 (mitochondrial carrier, Aralar), member 12
mm10_v2_chr7_+_79392305_79392346	0.0201536	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000117227.1|Fanci|ENSMUSG00000039187.10|Fanconi anemia, complementation group I 	ENSMUST00000118959.1|Fanci|ENSMUSG00000039187.10|Fanconi anemia, complementation group I 	ENSMUST00000036865.6|Fanci|ENSMUSG00000039187.10|Fanconi anemia, complementation group I
mm10_v2_chr10_-_20725023_20725078	0.0195242	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000020165.7|Pde7b|ENSMUSG00000019990.8|phosphodiesterase 7B
mm10_v2_chr6_-_136941694_136941756	0.0193137	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000032344.5|Arhgdib|ENSMUSG00000030220.7|Rho, GDP dissociation inhibitor (GDI) beta
mm10_v2_chr11_+_88047302_88047373	0.01888	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000139129.2|Srsf1|ENSMUSG00000018379.11|serine/arginine-rich splicing factor 1
mm10_v2_chr7_+_128744870_128745020	0.0187156	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000042942.8|Sec23ip|ENSMUSG00000055319.7|Sec23 interacting protein
mm10_v2_chr18_-_46311891_46311928	0.0173024	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000072835.6|Ccdc112|ENSMUSG00000071855.4|coiled-coil domain containing 112
mm10_v2_chr2_+_32606979_32607057	0.0166499	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000113289.1|St6galnac6|ENSMUSG00000026811.12|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6 	ENSMUST00000095044.3|St6galnac6|ENSMUSG00000026811.12|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6
mm10_v2_chr13_-_95250166_95250336	0.0157869	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000162153.1|Pde8b|ENSMUSG00000021684.10|phosphodiesterase 8B 	ENSMUST00000160957.2|Pde8b|ENSMUSG00000021684.10|phosphodiesterase 8B 	ENSMUST00000159598.1|Pde8b|ENSMUSG00000021684.10|phosphodiesterase 8B 	ENSMUST00000162412.1|Pde8b|ENSMUSG00000021684.10|phosphodiesterase 8B
mm10_v2_chr18_+_4920509_4920586	0.015622	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000126977.1|Svil|ENSMUSG00000024236.11|supervillin
mm10_v2_chr1_+_164048214_164048234	0.0147622	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000027874.5|Sele|ENSMUSG00000026582.6|selectin, endothelial cell
mm10_v2_chr7_+_12927410_12927439	0.0142546	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000045870.4|2310014L17Rik|ENSMUSG00000033967.4|RIKEN cDNA 2310014L17 gene
mm10_v2_chr6_-_83506895_83506969	0.013802	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000113888.1|Dguok|ENSMUSG00000014554.7|deoxyguanosine kinase 	ENSMUST00000014698.3|Dguok|ENSMUSG00000014554.7|deoxyguanosine kinase
mm10_v2_chr5_+_121749196_121749196	0.0135947	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000161064.1|Atxn2|ENSMUSG00000042605.9|ataxin 2
mm10_v2_chr19_+_41933464_41933540	0.0133643	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000026154.7|Zdhhc16|ENSMUSG00000025157.7|zinc finger, DHHC domain containing 16
mm10_v2_chr6_+_124304646_124304671	0.0132394	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000112541.2|Cd163|ENSMUSG00000008845.3|CD163 antigen 	ENSMUST00000032234.2|Cd163|ENSMUSG00000008845.3|CD163 antigen
mm10_v2_chr13_+_67833235_67833235	0.0129056	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000060609.7|Gm10037|ENSMUSG00000058246.6|predicted gene 10037
mm10_v2_chr2_-_132247747_132247807	0.0125579	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000110163.1|Tmem230|ENSMUSG00000027341.4|transmembrane protein 230 	ENSMUST00000180286.1|Tmem230|ENSMUSG00000027341.4|transmembrane protein 230 	ENSMUST00000028816.2|Tmem230|ENSMUSG00000027341.4|transmembrane protein 230
mm10_v2_chr17_+_45734506_45734630	0.0119335	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000180558.1|F630040K05Rik|ENSMUSG00000097727.1|RIKEN cDNA F630040K05 gene
mm10_v2_chr4_+_134930898_134930997	0.0109478	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000030622.2|Syf2|ENSMUSG00000028821.2|SYF2 homolog, RNA splicing factor (S. cerevisiae)
mm10_v2_chr2_+_110597298_110597316	0.0102466	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000045972.6|Slc5a12|ENSMUSG00000041644.8|solute carrier family 5 (sodium/glucose cotransporter), member 12 	ENSMUST00000111026.2|Slc5a12|ENSMUSG00000041644.8|solute carrier family 5 (sodium/glucose cotransporter), member 12
mm10_v2_chr2_+_119047116_119047121	0.00907521	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000152380.1|Casc5|ENSMUSG00000027326.7|cancer susceptibility candidate 5 	ENSMUST00000099542.2|Casc5|ENSMUSG00000027326.7|cancer susceptibility candidate 5
mm10_v2_chr3_-_34351685_34351715	0.00898962	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000174114.1|Gm20514|ENSMUSG00000092355.1|predicted gene 20514
mm10_v2_chr18_-_64516547_64516565	0.00852155	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000025483.9|Nars|ENSMUSG00000024587.9|asparaginyl-tRNA synthetase
mm10_v2_chr18_-_10706688_10706771	0.00842127	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000002549.7|Abhd3|ENSMUSG00000002475.9|abhydrolase domain containing 3 	ENSMUST00000117726.1|Abhd3|ENSMUSG00000002475.9|abhydrolase domain containing 3 	ENSMUST00000117828.1|Abhd3|ENSMUSG00000002475.9|abhydrolase domain containing 3
mm10_v2_chr4_+_147492417_147492417	0.00837351	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000105721.2|Gm13152|ENSMUSG00000078496.3|predicted gene 13152
mm10_v2_chr14_+_118854695_118854732	0.00837344	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000100314.3|Cldn10|ENSMUSG00000022132.9|claudin 10
mm10_v2_chr9_-_22259887_22259949	0.00786215	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000086281.4|Zfp599|ENSMUSG00000062794.8|zinc finger protein 599
mm10_v2_chr10_-_63927434_63927434	0.00741892	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000079279.3|Gm10118|ENSMUSG00000062561.3|predicted gene 10118
mm10_v2_chr19_+_23723279_23723279	0.00733187	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000067077.1|Gm9938|ENSMUSG00000054178.1|predicted gene 9938
mm10_v2_chr7_-_46672537_46672559	0.00587089	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000049298.7|Tph1|ENSMUSG00000040046.7|tryptophan hydroxylase 1
mm10_v2_chr16_-_16359016_16359040	0.00563225	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000023477.7|Dnm1l|ENSMUSG00000022789.8|dynamin 1-like 	ENSMUST00000096229.3|Dnm1l|ENSMUSG00000022789.8|dynamin 1-like 	ENSMUST00000115749.1|Dnm1l|ENSMUSG00000022789.8|dynamin 1-like
mm10_v2_chr15_+_98571004_98571026	0.00526217	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000023728.6|4930415O20Rik|ENSMUSG00000022993.6|RIKEN cDNA 4930415O20 gene
mm10_v2_chr4_-_149126688_149126763	0.00404848	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000030815.2|Cort|ENSMUSG00000028971.4|cortistatin
mm10_v2_chr19_-_44107447_44107492	0.00378938	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000119591.1|Chuk|ENSMUSG00000025199.10|conserved helix-loop-helix ubiquitous kinase 	ENSMUST00000026217.4|Chuk|ENSMUSG00000025199.10|conserved helix-loop-helix ubiquitous kinase
mm10_v2_chr16_-_45724600_45724619	0.00342637	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000096057.4|Tagln3|ENSMUSG00000022658.10|transgelin 3
mm10_v2_chr13_-_41847626_41847684	0.00308507	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000121404.1|Adtrp|ENSMUSG00000058022.7|androgen dependent TFPI regulating protein
mm10_v2_chr14_-_5863663_5863663	0.00241727	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000178594.1|Gm8237|ENSMUSG00000090707.2|predicted gene 8237
mm10_v2_chr1_+_190928492_190928550	0.00232723	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000066632.7|Angel2|ENSMUSG00000026634.10|angel homolog 2 (Drosophila) 	ENSMUST00000110899.1|Angel2|ENSMUSG00000026634.10|angel homolog 2 (Drosophila)
mm10_v2_chr5_-_28210168_28210179	0.00142094	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000117098.1|Cnpy1|ENSMUSG00000044681.12|canopy 1 homolog (zebrafish)
mm10_v2_chr5_-_38480131_38480306	0.00137233	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000143758.1|Slc2a9|ENSMUSG00000005107.7|solute carrier family 2 (facilitated glucose transporter), member 9 	ENSMUST00000067886.5|Slc2a9|ENSMUSG00000005107.7|solute carrier family 2 (facilitated glucose transporter), member 9
mm10_v2_chrX_-_106221145_106221169	0.00102118	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000113495.2|Taf9b|ENSMUSG00000047242.8|TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor
mm10_v2_chr11_+_5520652_5520659	0.000781266	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000063084.9|Xbp1|ENSMUSG00000020484.12|X-box binding protein 1
