mm10_v2_chr15_-_66831625_66831668	1.44192	Nanog	ENSMUST00000164163.1|Sla|ENSMUSG00000022372.8|src-like adaptor
mm10_v2_chr13_-_41273977_41273977	1.29345	Nanog	ENSMUST00000163881.1|Gm17364|ENSMUSG00000090853.1|predicted gene, 17364
mm10_v2_chrY_-_1245685_1245752	1.24034	Nanog	ENSMUST00000143286.1|Uty|ENSMUSG00000068457.8|ubiquitously transcribed tetratricopeptide repeat gene, Y chromosome 	ENSMUST00000137048.1|Uty|ENSMUSG00000068457.8|ubiquitously transcribed tetratricopeptide repeat gene, Y chromosome 	ENSMUST00000069309.7|Uty|ENSMUSG00000068457.8|ubiquitously transcribed tetratricopeptide repeat gene, Y chromosome 	ENSMUST00000139365.1|Uty|ENSMUSG00000068457.8|ubiquitously transcribed tetratricopeptide repeat gene, Y chromosome
mm10_v2_chr18_-_35215008_35215033	1.11121	Nanog	ENSMUST00000091636.3|Lrrtm2|ENSMUSG00000071862.2|leucine rich repeat transmembrane neuronal 2
mm10_v2_chr2_+_134786154_134786170	0.979015	Nanog	ENSMUST00000110116.1|Plcb1|ENSMUSG00000051177.10|phospholipase C, beta 1
mm10_v2_chr17_-_81649607_81649607	0.919391	Nanog	ENSMUST00000163680.2|Slc8a1|ENSMUSG00000054640.8|solute carrier family 8 (sodium/calcium exchanger), member 1 	ENSMUST00000086538.3|Slc8a1|ENSMUSG00000054640.8|solute carrier family 8 (sodium/calcium exchanger), member 1 	ENSMUST00000163123.1|Slc8a1|ENSMUSG00000054640.8|solute carrier family 8 (sodium/calcium exchanger), member 1
mm10_v2_chr7_+_49246131_49246202	0.8613	Nanog	ENSMUST00000064395.6|Nav2|ENSMUSG00000052512.9|neuron navigator 2
mm10_v2_chr6_+_80018877_80018945	0.855003	Nanog	ENSMUST00000147663.1|Lrrtm4|ENSMUSG00000052581.7|leucine rich repeat transmembrane neuronal 4 	ENSMUST00000128718.1|Lrrtm4|ENSMUSG00000052581.7|leucine rich repeat transmembrane neuronal 4 	ENSMUST00000126005.1|Lrrtm4|ENSMUSG00000052581.7|leucine rich repeat transmembrane neuronal 4 	ENSMUST00000133918.1|Lrrtm4|ENSMUSG00000052581.7|leucine rich repeat transmembrane neuronal 4
mm10_v2_chr17_+_3397189_3397207	0.722843	Nanog	ENSMUST00000072156.6|Tiam2|ENSMUSG00000023800.8|T cell lymphoma invasion and metastasis 2
mm10_v2_chr17_+_46297406_46297483	0.714279	Nanog	ENSMUST00000061722.6|Dlk2|ENSMUSG00000047428.8|delta-like 2 homolog (Drosophila) 	ENSMUST00000166280.1|Dlk2|ENSMUSG00000047428.8|delta-like 2 homolog (Drosophila)
mm10_v2_chr18_-_78206408_78206440	0.678164	Nanog	ENSMUST00000163367.1|Slc14a2|ENSMUSG00000024552.9|solute carrier family 14 (urea transporter), member 2
mm10_v2_chr6_+_80019008_80019048	0.673087	Nanog	ENSMUST00000126399.1|Lrrtm4|ENSMUSG00000052581.7|leucine rich repeat transmembrane neuronal 4 	ENSMUST00000136421.1|Lrrtm4|ENSMUSG00000052581.7|leucine rich repeat transmembrane neuronal 4
mm10_v2_chrX_+_153237466_153237466	0.661492	Nanog	ENSMUST00000143880.1|Klf8|ENSMUSG00000041649.7|Kruppel-like factor 8
mm10_v2_chr3_+_62419668_62419668	0.622386	Nanog	ENSMUST00000161057.1|Arhgef26|ENSMUSG00000036885.8|Rho guanine nucleotide exchange factor (GEF) 26
mm10_v2_chr7_-_63212514_63212531	0.604067	Nanog	ENSMUST00000032738.5|Chrna7|ENSMUSG00000030525.7|cholinergic receptor, nicotinic, alpha polypeptide 7
mm10_v2_chr7_+_128688480_128688500	0.584901	Nanog	ENSMUST00000118605.1|Inpp5f|ENSMUSG00000042105.12|inositol polyphosphate-5-phosphatase F
mm10_v2_chr1_-_52490736_52490736	0.543187	Nanog	ENSMUST00000170269.1|Nab1|ENSMUSG00000002881.8|Ngfi-A binding protein 1
mm10_v2_chr9_-_15357692_15357788	0.53098	Nanog	ENSMUST00000098979.3|5830418K08Rik|ENSMUSG00000046111.10|RIKEN cDNA 5830418K08 gene 	ENSMUST00000161132.1|5830418K08Rik|ENSMUSG00000046111.10|RIKEN cDNA 5830418K08 gene
mm10_v2_chr14_-_78536762_78536851	0.525501	Nanog	ENSMUST00000123853.1|Akap11|ENSMUSG00000022016.9|A kinase (PRKA) anchor protein 11
mm10_v2_chr1_+_169655493_169655508	0.471294	Nanog	ENSMUST00000027997.3|Rgs5|ENSMUSG00000026678.5|regulator of G-protein signaling 5
mm10_v2_chr10_+_39612934_39612934	0.461437	Nanog	ENSMUST00000019987.6|Traf3ip2|ENSMUSG00000019842.6|TRAF3 interacting protein 2
mm10_v2_chr10_-_25200110_25200178	0.456321	Nanog	ENSMUST00000100012.2|Akap7|ENSMUSG00000039166.9|A kinase (PRKA) anchor protein 7
mm10_v2_chr16_-_3872378_3872411	0.444579	Nanog	ENSMUST00000090522.4|Zfp597|ENSMUSG00000039789.7|zinc finger protein 597
mm10_v2_chr8_+_110721462_110721486	0.443938	Nanog	ENSMUST00000052457.8|Mtss1l|ENSMUSG00000033763.8|metastasis suppressor 1-like
mm10_v2_chr13_-_51567084_51567084	0.443168	Nanog	ENSMUST00000021898.5|Shc3|ENSMUSG00000021448.6|src homology 2 domain-containing transforming protein C3
mm10_v2_chr10_+_58394361_58394380	0.442725	Nanog	ENSMUST00000020077.4|Lims1|ENSMUSG00000019920.11|LIM and senescent cell antigen-like domains 1
mm10_v2_chr6_+_8259288_8259312	0.439941	Nanog	ENSMUST00000159335.1|Gm16039|ENSMUSG00000089862.2|predicted gene 16039
mm10_v2_chr14_-_26971232_26971232	0.435122	Nanog	ENSMUST00000036570.4|Appl1|ENSMUSG00000040760.4|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1
mm10_v2_chr7_+_113514085_113514109	0.435116	Nanog	ENSMUST00000122890.1|Far1|ENSMUSG00000030759.10|fatty acyl CoA reductase 1
mm10_v2_chr11_+_62248977_62249011	0.426216	Nanog	ENSMUST00000018644.2|Adora2b|ENSMUSG00000018500.2|adenosine A2b receptor
mm10_v2_chr12_+_35047180_35047230	0.42127	Nanog	ENSMUST00000048519.9|Snx13|ENSMUSG00000020590.9|sorting nexin 13 	ENSMUST00000163677.1|Snx13|ENSMUSG00000020590.9|sorting nexin 13
mm10_v2_chr2_+_164948219_164948245	0.418519	Nanog	ENSMUST00000017881.2|Mmp9|ENSMUSG00000017737.2|matrix metallopeptidase 9
mm10_v2_chr2_-_45112890_45113010	0.415816	Nanog	ENSMUST00000076836.6|Zeb2|ENSMUSG00000026872.10|zinc finger E-box binding homeobox 2
mm10_v2_chr15_+_80097866_80097873	0.394666	Nanog	ENSMUST00000143928.1|Syngr1|ENSMUSG00000022415.6|synaptogyrin 1
mm10_v2_chr10_+_58394381_58394395	0.392925	Nanog	ENSMUST00000105468.1|Lims1|ENSMUSG00000019920.11|LIM and senescent cell antigen-like domains 1
mm10_v2_chr2_-_144527341_144527424	0.39228	Nanog	ENSMUST00000163701.1|Dzank1|ENSMUSG00000037259.9|double zinc ribbon and ankyrin repeat domains 1 	ENSMUST00000081982.5|Dzank1|ENSMUSG00000037259.9|double zinc ribbon and ankyrin repeat domains 1
mm10_v2_chr11_-_98053415_98053467	0.391052	Nanog	ENSMUST00000017544.2|Stac2|ENSMUSG00000017400.4|SH3 and cysteine rich domain 2
mm10_v2_chr12_-_83487708_83487729	0.384135	Nanog	ENSMUST00000177959.1|Dpf3|ENSMUSG00000021221.9|D4, zinc and double PHD fingers, family 3 	ENSMUST00000178756.1|Dpf3|ENSMUSG00000021221.9|D4, zinc and double PHD fingers, family 3
mm10_v2_chr11_-_109298066_109298079	0.379245	Nanog	ENSMUST00000106706.1|Rgs9|ENSMUSG00000020599.7|regulator of G-protein signaling 9
mm10_v2_chr12_-_34528844_34528904	0.362682	Nanog	ENSMUST00000110819.2|Hdac9|ENSMUSG00000004698.9|histone deacetylase 9
mm10_v2_chr6_+_8259327_8259350	0.359336	Nanog	ENSMUST00000159378.1|Gm16039|ENSMUSG00000089862.2|predicted gene 16039
mm10_v2_chr15_+_76246747_76246807	0.346729	Nanog	ENSMUST00000023225.6|Grina|ENSMUSG00000022564.6|glutamate receptor, ionotropic, N-methyl D-aspartate-associated protein 1 (glutamate binding)
mm10_v2_chr5_+_19907774_19907861	0.344998	Nanog	ENSMUST00000115267.2|Magi2|ENSMUSG00000040003.11|membrane associated guanylate kinase, WW and PDZ domain containing 2
mm10_v2_chr7_+_59228743_59228769	0.34462	Nanog	ENSMUST00000107537.1|Ube3a|ENSMUSG00000025326.8|ubiquitin protein ligase E3A
mm10_v2_chr19_-_56822161_56822220	0.342224	Nanog	ENSMUST00000118592.1|A630007B06Rik|ENSMUSG00000035173.8|RIKEN cDNA A630007B06 gene
mm10_v2_chr15_-_71954395_71954424	0.338625	Nanog	ENSMUST00000159410.1|Col22a1|ENSMUSG00000079022.3|collagen, type XXII, alpha 1
mm10_v2_chr14_+_65970610_65970621	0.338268	Nanog	ENSMUST00000127387.1|Clu|ENSMUSG00000022037.8|clusterin
mm10_v2_chr17_-_32800938_32800938	0.333789	Nanog	ENSMUST00000080905.6|Zfp811|ENSMUSG00000055202.7|zinc finger protein 811
mm10_v2_chr15_+_21111452_21111452	0.333137	Nanog	ENSMUST00000075132.6|Cdh12|ENSMUSG00000040452.8|cadherin 12
mm10_v2_chr7_+_112742025_112742060	0.331448	Nanog	ENSMUST00000164363.1|Tead1|ENSMUSG00000055320.10|TEA domain family member 1
mm10_v2_chr5_+_135806859_135806902	0.328216	Nanog	ENSMUST00000126232.1|Srrm3|ENSMUSG00000039860.13|serine/arginine repetitive matrix 3
mm10_v2_chr6_-_39725448_39725478	0.326843	Nanog	ENSMUST00000002487.8|Braf|ENSMUSG00000002413.9|Braf transforming gene
mm10_v2_chr2_+_62664279_62664300	0.323395	Nanog	ENSMUST00000028257.2|Gca|ENSMUSG00000026893.4|grancalcin
mm10_v2_chr13_-_9765137_9765321	0.321165	Nanog	ENSMUST00000062658.8|Zmynd11|ENSMUSG00000021156.10|zinc finger, MYND domain containing 11 	ENSMUST00000130151.1|Zmynd11|ENSMUSG00000021156.10|zinc finger, MYND domain containing 11 	ENSMUST00000110636.1|Zmynd11|ENSMUSG00000021156.10|zinc finger, MYND domain containing 11 	ENSMUST00000152725.1|Zmynd11|ENSMUSG00000021156.10|zinc finger, MYND domain containing 11
mm10_v2_chr2_+_69897255_69897303	0.317185	Nanog	ENSMUST00000131553.1|Ubr3|ENSMUSG00000044308.11|ubiquitin protein ligase E3 component n-recognin 3
mm10_v2_chr3_-_54915867_54915887	0.313041	Nanog	ENSMUST00000070342.3|Sertm1|ENSMUSG00000056306.5|serine rich and transmembrane domain containing 1
mm10_v2_chr14_+_65971049_65971074	0.312135	Nanog	ENSMUST00000128539.1|Clu|ENSMUSG00000022037.8|clusterin
mm10_v2_chr19_+_4003334_4003366	0.309105	Nanog	ENSMUST00000025806.3|Doc2g|ENSMUSG00000024871.4|double C2, gamma
mm10_v2_chr3_+_88965812_88965812	0.307237	Nanog	ENSMUST00000090933.4|Ash1l|ENSMUSG00000028053.7|ash1 (absent, small, or homeotic)-like (Drosophila)
mm10_v2_chr2_-_173276144_173276189	0.303537	Nanog	ENSMUST00000139306.1|Pmepa1|ENSMUSG00000038400.9|prostate transmembrane protein, androgen induced 1
mm10_v2_chr11_-_109298090_109298118	0.300219	Nanog	ENSMUST00000106704.2|Rgs9|ENSMUSG00000020599.7|regulator of G-protein signaling 9
mm10_v2_chr8_-_34965631_34965714	0.300183	Nanog	ENSMUST00000033929.4|Tnks|ENSMUSG00000031529.4|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase
mm10_v2_chr9_-_52168111_52168111	0.294527	Nanog	ENSMUST00000165519.1|Zc3h12c|ENSMUSG00000035164.7|zinc finger CCCH type containing 12C
mm10_v2_chr5_+_25246775_25246802	0.292735	Nanog	ENSMUST00000144971.1|Galnt11|ENSMUSG00000038072.8|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 11
mm10_v2_chr16_+_20696175_20696211	0.292588	Nanog	ENSMUST00000128273.1|Fam131a|ENSMUSG00000050821.7|family with sequence similarity 131, member A
mm10_v2_chr11_+_75531690_75531743	0.291198	Nanog	ENSMUST00000149727.1|Slc43a2|ENSMUSG00000038178.10|solute carrier family 43, member 2 	ENSMUST00000042561.7|Slc43a2|ENSMUSG00000038178.10|solute carrier family 43, member 2 	ENSMUST00000108433.1|Slc43a2|ENSMUSG00000038178.10|solute carrier family 43, member 2 	ENSMUST00000143035.1|Slc43a2|ENSMUSG00000038178.10|solute carrier family 43, member 2
mm10_v2_chr14_+_65970804_65970903	0.288195	Nanog	ENSMUST00000138191.1|Clu|ENSMUSG00000022037.8|clusterin
mm10_v2_chrX_+_159840463_159840481	0.287882	Nanog	ENSMUST00000112451.1|Sh3kbp1|ENSMUSG00000040990.11|SH3-domain kinase binding protein 1 	ENSMUST00000112453.2|Sh3kbp1|ENSMUSG00000040990.11|SH3-domain kinase binding protein 1
mm10_v2_chr6_+_8259379_8259460	0.281696	Nanog	ENSMUST00000162034.1|Gm16039|ENSMUSG00000089862.2|predicted gene 16039 	ENSMUST00000160705.1|Gm16039|ENSMUSG00000089862.2|predicted gene 16039 	ENSMUST00000159433.1|Gm16039|ENSMUSG00000089862.2|predicted gene 16039
mm10_v2_chr12_-_101958148_101958246	0.279286	Nanog	ENSMUST00000159883.1|Atxn3|ENSMUSG00000021189.5|ataxin 3 	ENSMUST00000160251.1|Atxn3|ENSMUSG00000021189.5|ataxin 3 	ENSMUST00000161011.1|Atxn3|ENSMUSG00000021189.5|ataxin 3 	ENSMUST00000021606.5|Atxn3|ENSMUSG00000021189.5|ataxin 3
mm10_v2_chr2_+_116067213_116067250	0.27767	Nanog	ENSMUST00000152412.1|G630016G05Rik|ENSMUSG00000086308.1|RIKEN cDNA G630016G05 gene
mm10_v2_chr5_+_30711849_30711905	0.276532	Nanog	ENSMUST00000088081.4|Dpysl5|ENSMUSG00000029168.8|dihydropyrimidinase-like 5 	ENSMUST00000101442.3|Dpysl5|ENSMUSG00000029168.8|dihydropyrimidinase-like 5
mm10_v2_chr17_+_8849974_8850001	0.274745	Nanog	ENSMUST00000115720.1|Pde10a|ENSMUSG00000023868.9|phosphodiesterase 10A
mm10_v2_chr9_-_15301555_15301607	0.269589	Nanog	ENSMUST00000034414.8|4931406C07Rik|ENSMUSG00000031938.8|RIKEN cDNA 4931406C07 gene
mm10_v2_chr4_+_12906838_12906881	0.268832	Nanog	ENSMUST00000143186.1|Triqk|ENSMUSG00000055963.6|triple QxxK/R motif containing 	ENSMUST00000183345.1|Triqk|ENSMUSG00000055963.6|triple QxxK/R motif containing
mm10_v2_chr11_-_109298121_109298142	0.266808	Nanog	ENSMUST00000020920.3|Rgs9|ENSMUSG00000020599.7|regulator of G-protein signaling 9
mm10_v2_chr3_+_10088173_10088173	0.266005	Nanog	ENSMUST00000061419.7|Gm9833|ENSMUSG00000049230.7|predicted gene 9833
mm10_v2_chr2_-_116067391_116067444	0.265524	Nanog	ENSMUST00000140185.1|2700033N17Rik|ENSMUSG00000086328.1|RIKEN cDNA 2700033N17 gene
mm10_v2_chr6_+_125145235_125145251	0.259499	Nanog	ENSMUST00000119527.1|Iffo1|ENSMUSG00000038271.11|intermediate filament family orphan 1 	ENSMUST00000088276.6|Iffo1|ENSMUSG00000038271.11|intermediate filament family orphan 1 	ENSMUST00000051171.7|Iffo1|ENSMUSG00000038271.11|intermediate filament family orphan 1 	ENSMUST00000117675.1|Iffo1|ENSMUSG00000038271.11|intermediate filament family orphan 1
mm10_v2_chr2_+_29060239_29060287	0.258091	Nanog	ENSMUST00000100237.3|Ttf1|ENSMUSG00000026803.11|transcription termination factor, RNA polymerase I
mm10_v2_chr11_+_75468040_75468096	0.250229	Nanog	ENSMUST00000043598.7|Tlcd2|ENSMUSG00000038217.7|TLC domain containing 2 	ENSMUST00000108435.1|Tlcd2|ENSMUSG00000038217.7|TLC domain containing 2
mm10_v2_chr10_-_127121125_127121160	0.249587	Nanog	ENSMUST00000164259.1|Os9|ENSMUSG00000040462.6|amplified in osteosarcoma 	ENSMUST00000080975.4|Os9|ENSMUSG00000040462.6|amplified in osteosarcoma
mm10_v2_chr5_-_147076482_147076586	0.238287	Nanog	ENSMUST00000016664.7|Lnx2|ENSMUSG00000016520.7|ligand of numb-protein X 2
mm10_v2_chr11_-_94321957_94321988	0.236941	Nanog	ENSMUST00000166312.1|Luc7l3|ENSMUSG00000020863.9|LUC7-like 3 (S. cerevisiae) 	ENSMUST00000107821.2|Luc7l3|ENSMUSG00000020863.9|LUC7-like 3 (S. cerevisiae) 	ENSMUST00000021226.7|Luc7l3|ENSMUSG00000020863.9|LUC7-like 3 (S. cerevisiae) 	ENSMUST00000107820.1|Luc7l3|ENSMUSG00000020863.9|LUC7-like 3 (S. cerevisiae)
mm10_v2_chr7_-_98656530_98656600	0.236303	Nanog	ENSMUST00000038359.4|2210018M11Rik|ENSMUSG00000035401.8|RIKEN cDNA 2210018M11 gene
mm10_v2_chr9_+_109096659_109096710	0.235927	Nanog	ENSMUST00000130366.1|Plxnb1|ENSMUSG00000053646.7|plexin B1
mm10_v2_chr3_-_123672321_123672400	0.227297	Nanog	ENSMUST00000172537.1|Ndst3|ENSMUSG00000027977.9|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3 	ENSMUST00000029602.6|Ndst3|ENSMUSG00000027977.9|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3
mm10_v2_chr1_+_135584773_135584773	0.224213	Nanog	ENSMUST00000067468.4|Gm4793|ENSMUSG00000054412.4|predicted gene 4793
mm10_v2_chr10_+_69785507_69785525	0.220165	Nanog	ENSMUST00000182993.1|Ank3|ENSMUSG00000069601.7|ankyrin 3, epithelial
mm10_v2_chr11_+_75532099_75532125	0.218575	Nanog	ENSMUST00000169547.2|Slc43a2|ENSMUSG00000038178.10|solute carrier family 43, member 2
mm10_v2_chrX_-_135009185_135009225	0.216459	Nanog	ENSMUST00000113185.2|Zmat1|ENSMUSG00000052676.10|zinc finger, matrin type 1 	ENSMUST00000064659.5|Zmat1|ENSMUSG00000052676.10|zinc finger, matrin type 1
mm10_v2_chr13_+_104178797_104178872	0.215258	Nanog	ENSMUST00000022225.5|Trim23|ENSMUSG00000021712.8|tripartite motif-containing 23 	ENSMUST00000069187.5|Trim23|ENSMUSG00000021712.8|tripartite motif-containing 23
mm10_v2_chr5_-_124187150_124187225	0.213352	Nanog	ENSMUST00000161938.1|Pitpnm2|ENSMUSG00000029406.9|phosphatidylinositol transfer protein, membrane-associated 2
mm10_v2_chr11_+_109485606_109485713	0.209689	Nanog	ENSMUST00000106697.1|Arsg|ENSMUSG00000020604.7|arylsulfatase G
mm10_v2_chr3_-_146499721_146499803	0.209247	Nanog	ENSMUST00000029839.4|Spata1|ENSMUSG00000028188.7|spermatogenesis associated 1
mm10_v2_chr7_+_28693032_28693144	0.20812	Nanog	ENSMUST00000151227.1|Fbxo27|ENSMUSG00000037463.8|F-box protein 27 	ENSMUST00000108281.1|Fbxo27|ENSMUSG00000037463.8|F-box protein 27
mm10_v2_chr11_-_20332654_20332688	0.205214	Nanog	ENSMUST00000004634.6|Slc1a4|ENSMUSG00000020142.6|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4
mm10_v2_chr1_+_153874335_153874354	0.204937	Nanog	ENSMUST00000055314.3|Gm5531|ENSMUSG00000043282.3|predicted gene 5531
mm10_v2_chr2_+_69897220_69897247	0.204123	Nanog	ENSMUST00000055758.9|Ubr3|ENSMUSG00000044308.11|ubiquitin protein ligase E3 component n-recognin 3 	ENSMUST00000112251.2|Ubr3|ENSMUSG00000044308.11|ubiquitin protein ligase E3 component n-recognin 3
mm10_v2_chr7_-_141434402_141434486	0.201699	Nanog	ENSMUST00000136354.1|Slc25a22|ENSMUSG00000019082.11|solute carrier family 25 (mitochondrial carrier, glutamate), member 22
mm10_v2_chr3_+_114030532_114030571	0.201486	Nanog	ENSMUST00000123619.1|Col11a1|ENSMUSG00000027966.13|collagen, type XI, alpha 1 	ENSMUST00000092155.5|Col11a1|ENSMUSG00000027966.13|collagen, type XI, alpha 1
mm10_v2_chr5_-_137684665_137684729	0.200629	Nanog	ENSMUST00000100544.4|Agfg2|ENSMUSG00000029722.9|ArfGAP with FG repeats 2 	ENSMUST00000031736.9|Agfg2|ENSMUSG00000029722.9|ArfGAP with FG repeats 2 	ENSMUST00000151839.1|Agfg2|ENSMUSG00000029722.9|ArfGAP with FG repeats 2
mm10_v2_chr11_-_20332689_20332774	0.200628	Nanog	ENSMUST00000109594.1|Slc1a4|ENSMUSG00000020142.6|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4
mm10_v2_chr6_-_29179584_29179584	0.20002	Nanog	ENSMUST00000159200.1|Prrt4|ENSMUSG00000079654.3|proline-rich transmembrane protein 4
mm10_v2_chr9_+_58554799_58554799	0.198498	Nanog	ENSMUST00000098676.2|Gm10657|ENSMUSG00000074273.2|predicted gene 10657
mm10_v2_chrX_+_7822289_7822289	0.19681	Nanog	ENSMUST00000009875.4|Kcnd1|ENSMUSG00000009731.4|potassium voltage-gated channel, Shal-related family, member 1
mm10_v2_chr17_+_35841668_35841683	0.196286	Nanog	ENSMUST00000174124.1|Mdc1|ENSMUSG00000061607.8|mediator of DNA damage checkpoint 1
mm10_v2_chr5_+_19907502_19907551	0.190716	Nanog	ENSMUST00000101558.3|Magi2|ENSMUSG00000040003.11|membrane associated guanylate kinase, WW and PDZ domain containing 2
mm10_v2_chr1_+_89454769_89454885	0.190205	Nanog	ENSMUST00000027521.8|Agap1|ENSMUSG00000055013.8|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 	ENSMUST00000074945.5|Agap1|ENSMUSG00000055013.8|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1
mm10_v2_chr9_-_7184440_7184518	0.189702	Nanog	ENSMUST00000140466.1|Dync2h1|ENSMUSG00000047193.9|dynein cytoplasmic 2 heavy chain 1
mm10_v2_chr7_+_25267669_25267723	0.187297	Nanog	ENSMUST00000169266.1|Cic|ENSMUSG00000005442.7|capicua homolog (Drosophila)
mm10_v2_chr7_+_100706623_100706668	0.185003	Nanog	ENSMUST00000107042.1|Fam168a|ENSMUSG00000029461.9|family with sequence similarity 168, member A
mm10_v2_chr7_+_64287665_64287676	0.18255	Nanog	ENSMUST00000032736.4|Mtmr10|ENSMUSG00000030522.8|myotubularin related protein 10
mm10_v2_chr10_-_9901079_9901250	0.182499	Nanog	ENSMUST00000141722.1|Stxbp5|ENSMUSG00000019790.10|syntaxin binding protein 5 (tomosyn)
mm10_v2_chr10_+_18469958_18469981	0.178646	Nanog	ENSMUST00000162891.1|Nhsl1|ENSMUSG00000039835.9|NHS-like 1 	ENSMUST00000100054.3|Nhsl1|ENSMUSG00000039835.9|NHS-like 1
mm10_v2_chr17_+_7170101_7170132	0.178319	Nanog	ENSMUST00000024575.6|Rps6ka2|ENSMUSG00000023809.9|ribosomal protein S6 kinase, polypeptide 2
mm10_v2_chr5_-_139484475_139484549	0.178238	Nanog	ENSMUST00000110851.1|Zfand2a|ENSMUSG00000053581.7|zinc finger, AN1-type domain 2A 	ENSMUST00000079996.6|Zfand2a|ENSMUSG00000053581.7|zinc finger, AN1-type domain 2A
mm10_v2_chr15_+_98092569_98092603	0.177529	Nanog	ENSMUST00000163507.1|Pfkm|ENSMUSG00000033065.7|phosphofructokinase, muscle
mm10_v2_chr12_+_24651346_24651409	0.176988	Nanog	ENSMUST00000020982.5|Klf11|ENSMUSG00000020653.5|Kruppel-like factor 11
mm10_v2_chr16_+_11405648_11405713	0.175758	Nanog	ENSMUST00000096273.2|Snx29|ENSMUSG00000071669.8|sorting nexin 29
mm10_v2_chr2_-_140066661_140066805	0.17546	Nanog	ENSMUST00000046656.2|Tasp1|ENSMUSG00000039033.5|taspase, threonine aspartase 1 	ENSMUST00000099304.3|Tasp1|ENSMUSG00000039033.5|taspase, threonine aspartase 1 	ENSMUST00000110079.2|Tasp1|ENSMUSG00000039033.5|taspase, threonine aspartase 1
mm10_v2_chr13_-_9764943_9764994	0.168141	Nanog	ENSMUST00000110634.1|Zmynd11|ENSMUSG00000021156.10|zinc finger, MYND domain containing 11
mm10_v2_chr11_+_115154139_115154194	0.168083	Nanog	ENSMUST00000021076.5|Rab37|ENSMUSG00000020732.7|RAB37, member of RAS oncogene family
mm10_v2_chr5_-_124249758_124249782	0.167538	Nanog	ENSMUST00000162812.1|Pitpnm2|ENSMUSG00000029406.9|phosphatidylinositol transfer protein, membrane-associated 2
mm10_v2_chr15_-_50889043_50889054	0.166842	Nanog	ENSMUST00000183997.1|Trps1|ENSMUSG00000038679.10|trichorhinophalangeal syndrome I (human) 	ENSMUST00000183757.1|Trps1|ENSMUSG00000038679.10|trichorhinophalangeal syndrome I (human)
mm10_v2_chr16_+_3872368_3872385	0.165333	Nanog	ENSMUST00000151988.1|Naa60|ENSMUSG00000005982.7|N(alpha)-acetyltransferase 60, NatF catalytic subunit
mm10_v2_chr1_-_158814469_158814469	0.164845	Nanog	ENSMUST00000161589.2|Pappa2|ENSMUSG00000073530.5|pappalysin 2
mm10_v2_chr4_+_136310991_136311054	0.161983	Nanog	ENSMUST00000084219.5|Hnrnpr|ENSMUSG00000066037.8|heterogeneous nuclear ribonucleoprotein R
mm10_v2_chr2_-_176149825_176149825	0.161549	Nanog	ENSMUST00000109049.3|Gm2004|ENSMUSG00000095648.1|predicted gene 2004 	ENSMUST00000179349.1|Gm2004|ENSMUSG00000095648.1|predicted gene 2004
mm10_v2_chr10_+_40349265_40349387	0.161256	Nanog	ENSMUST00000044672.4|Cdk19|ENSMUSG00000038481.6|cyclin-dependent kinase 19 	ENSMUST00000095743.2|Cdk19|ENSMUSG00000038481.6|cyclin-dependent kinase 19
mm10_v2_chr17_+_21691860_21691860	0.159755	Nanog	ENSMUST00000072133.4|Gm10226|ENSMUSG00000067929.3|predicted gene 10226
mm10_v2_chr7_-_25754701_25754750	0.157893	Nanog	ENSMUST00000108401.1|Hnrnpul1|ENSMUSG00000040725.7|heterogeneous nuclear ribonucleoprotein U-like 1 	ENSMUST00000043765.7|Hnrnpul1|ENSMUSG00000040725.7|heterogeneous nuclear ribonucleoprotein U-like 1
mm10_v2_chr11_+_69088490_69088553	0.157128	Nanog	ENSMUST00000021273.6|Vamp2|ENSMUSG00000020894.10|vesicle-associated membrane protein 2 	ENSMUST00000117780.1|Vamp2|ENSMUSG00000020894.10|vesicle-associated membrane protein 2
mm10_v2_chr16_+_19760902_19761054	0.155073	Nanog	ENSMUST00000119468.1|B3gnt5|ENSMUSG00000022686.8|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5
mm10_v2_chr14_-_26534870_26534931	0.154217	Nanog	ENSMUST00000139075.1|Slmap|ENSMUSG00000021870.11|sarcolemma associated protein 	ENSMUST00000102956.1|Slmap|ENSMUSG00000021870.11|sarcolemma associated protein
mm10_v2_chr18_-_67245818_67245842	0.15369	Nanog	ENSMUST00000073054.3|Mppe1|ENSMUSG00000062526.3|metallophosphoesterase 1
mm10_v2_chr1_-_152625212_152625220	0.148652	Nanog	ENSMUST00000027760.7|Rgl1|ENSMUSG00000026482.7|ral guanine nucleotide dissociation stimulator,-like 1
mm10_v2_chr18_-_15718046_15718046	0.148542	Nanog	ENSMUST00000053017.6|Chst9|ENSMUSG00000047161.6|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9
mm10_v2_chr19_-_32196393_32196428	0.144782	Nanog	ENSMUST00000151822.1|Sgms1|ENSMUSG00000040451.11|sphingomyelin synthase 1
mm10_v2_chr2_-_181581996_181582008	0.144561	Nanog	ENSMUST00000057816.8|Uckl1|ENSMUSG00000089917.1|uridine-cytidine kinase 1-like 1
mm10_v2_chr3_-_49757257_49757316	0.143778	Nanog	ENSMUST00000035931.7|Pcdh18|ENSMUSG00000037892.8|protocadherin 18
mm10_v2_chr9_-_44305595_44305688	0.143155	Nanog	ENSMUST00000034629.4|Hinfp|ENSMUSG00000032119.4|histone H4 transcription factor
mm10_v2_chr10_-_109010955_109010983	0.142676	Nanog	ENSMUST00000105276.1|Syt1|ENSMUSG00000035864.8|synaptotagmin I 	ENSMUST00000064054.7|Syt1|ENSMUSG00000035864.8|synaptotagmin I
mm10_v2_chr11_+_86484647_86484716	0.142047	Nanog	ENSMUST00000020827.6|Rnft1|ENSMUSG00000020521.7|ring finger protein, transmembrane 1
mm10_v2_chr3_-_152193803_152193831	0.141532	Nanog	ENSMUST00000050073.6|Dnajb4|ENSMUSG00000028035.7|DnaJ (Hsp40) homolog, subfamily B, member 4
mm10_v2_chr15_-_93519499_93519526	0.140683	Nanog	ENSMUST00000109255.2|Prickle1|ENSMUSG00000036158.6|prickle homolog 1 (Drosophila)
mm10_v2_chr15_-_13173607_13173644	0.139103	Nanog	ENSMUST00000036439.4|Cdh6|ENSMUSG00000039385.4|cadherin 6
mm10_v2_chr7_-_6730412_6730431	0.138525	Nanog	ENSMUST00000051209.4|Peg3|ENSMUSG00000002265.9|paternally expressed 3
mm10_v2_chr15_+_78428564_78428636	0.136332	Nanog	ENSMUST00000166142.2|Kctd17|ENSMUSG00000033287.9|potassium channel tetramerisation domain containing 17 	ENSMUST00000162517.1|Kctd17|ENSMUSG00000033287.9|potassium channel tetramerisation domain containing 17 	ENSMUST00000089414.4|Kctd17|ENSMUSG00000033287.9|potassium channel tetramerisation domain containing 17
mm10_v2_chr13_+_24943144_24943164	0.136178	Nanog	ENSMUST00000021773.5|Gpld1|ENSMUSG00000021340.6|glycosylphosphatidylinositol specific phospholipase D1
mm10_v2_chr3_+_68869563_68869589	0.133873	Nanog	ENSMUST00000054551.2|1110032F04Rik|ENSMUSG00000046999.2|RIKEN cDNA 1110032F04 gene
mm10_v2_chr1_-_153900198_153900210	0.133348	Nanog	ENSMUST00000123490.1|5830403L16Rik|ENSMUSG00000045968.6|RIKEN cDNA 5830403L16 gene
mm10_v2_chr12_-_72408934_72409054	0.133296	Nanog	ENSMUST00000078505.7|Rtn1|ENSMUSG00000021087.11|reticulon 1
mm10_v2_chr16_+_13671858_13671918	0.131902	Nanog	ENSMUST00000023365.6|Bfar|ENSMUSG00000022684.8|bifunctional apoptosis regulator
mm10_v2_chr5_+_121397936_121398004	0.13184	Nanog	ENSMUST00000042163.8|Naa25|ENSMUSG00000042719.11|N(alpha)-acetyltransferase 25, NatB auxiliary subunit
mm10_v2_chr3_+_79884576_79884597	0.130564	Nanog	ENSMUST00000145992.1|Fam198b|ENSMUSG00000027955.10|family with sequence similarity 198, member B
mm10_v2_chr16_-_32877723_32877766	0.130098	Nanog	ENSMUST00000119810.1|1700021K19Rik|ENSMUSG00000035629.11|RIKEN cDNA 1700021K19 gene
mm10_v2_chr16_+_32877775_32877831	0.128311	Nanog	ENSMUST00000023489.4|Fyttd1|ENSMUSG00000022800.7|forty-two-three domain containing 1 	ENSMUST00000171325.1|Fyttd1|ENSMUSG00000022800.7|forty-two-three domain containing 1
mm10_v2_chr12_-_20900867_20900867	0.127969	Nanog	ENSMUST00000079237.5|Zfp125|ENSMUSG00000069755.4|zinc finger protein 125
mm10_v2_chr19_-_36736653_36736670	0.127097	Nanog	ENSMUST00000087321.2|Ppp1r3c|ENSMUSG00000067279.2|protein phosphatase 1, regulatory (inhibitor) subunit 3C
mm10_v2_chr10_+_90576570_90576668	0.125703	Nanog	ENSMUST00000182786.1|Anks1b|ENSMUSG00000058589.8|ankyrin repeat and sterile alpha motif domain containing 1B 	ENSMUST00000182600.1|Anks1b|ENSMUSG00000058589.8|ankyrin repeat and sterile alpha motif domain containing 1B
mm10_v2_chr4_+_126024506_126024550	0.125681	Nanog	ENSMUST00000106162.1|Csf3r|ENSMUSG00000028859.8|colony stimulating factor 3 receptor (granulocyte)
mm10_v2_chr4_-_126968124_126968154	0.118628	Nanog	ENSMUST00000106108.2|Zmym4|ENSMUSG00000042446.10|zinc finger, MYM-type 4
mm10_v2_chr3_+_79884496_79884571	0.118142	Nanog	ENSMUST00000118853.1|Fam198b|ENSMUSG00000027955.10|family with sequence similarity 198, member B
mm10_v2_chr2_-_167062981_167063048	0.117507	Nanog	ENSMUST00000048988.7|Znfx1|ENSMUSG00000039501.8|zinc finger, NFX1-type containing 1
mm10_v2_chr16_+_87454976_87454987	0.116382	Nanog	ENSMUST00000119504.1|Usp16|ENSMUSG00000025616.8|ubiquitin specific peptidase 16 	ENSMUST00000131356.1|Usp16|ENSMUSG00000025616.8|ubiquitin specific peptidase 16
mm10_v2_chr3_-_69127098_69127113	0.116041	Nanog	ENSMUST00000029353.2|Kpna4|ENSMUSG00000027782.4|karyopherin (importin) alpha 4
mm10_v2_chrX_+_8271133_8271179	0.113407	Nanog	ENSMUST00000127103.1|Slc38a5|ENSMUSG00000031170.8|solute carrier family 38, member 5 	ENSMUST00000115591.1|Slc38a5|ENSMUSG00000031170.8|solute carrier family 38, member 5
mm10_v2_chr16_-_18622403_18622403	0.112904	Nanog	ENSMUST00000167388.1|Gp1bb|ENSMUSG00000050761.3|glycoprotein Ib, beta polypeptide
mm10_v2_chr8_-_83594440_83594491	0.112234	Nanog	ENSMUST00000019382.9|Tecr|ENSMUSG00000031708.9|trans-2,3-enoyl-CoA reductase 	ENSMUST00000165740.1|Tecr|ENSMUSG00000031708.9|trans-2,3-enoyl-CoA reductase
mm10_v2_chr5_-_115652974_115652992	0.111475	Nanog	ENSMUST00000121746.1|Ccdc64|ENSMUSG00000041609.10|coiled-coil domain containing 64 	ENSMUST00000118576.1|Ccdc64|ENSMUSG00000041609.10|coiled-coil domain containing 64
mm10_v2_chr2_-_37703845_37703885	0.109688	Nanog	ENSMUST00000155237.1|Strbp|ENSMUSG00000026915.10|spermatid perinuclear RNA binding protein
mm10_v2_chr13_-_92131494_92131680	0.107922	Nanog	ENSMUST00000099326.3|Rasgrf2|ENSMUSG00000021708.10|RAS protein-specific guanine nucleotide-releasing factor 2 	ENSMUST00000146492.1|Rasgrf2|ENSMUSG00000021708.10|RAS protein-specific guanine nucleotide-releasing factor 2
mm10_v2_chr14_+_56887795_56887795	0.107572	Nanog	ENSMUST00000022511.8|Zmym2|ENSMUSG00000021945.8|zinc finger, MYM-type 2
mm10_v2_chr2_+_144527718_144527773	0.105649	Nanog	ENSMUST00000028914.2|Polr3f|ENSMUSG00000027427.7|polymerase (RNA) III (DNA directed) polypeptide F 	ENSMUST00000110017.2|Polr3f|ENSMUSG00000027427.7|polymerase (RNA) III (DNA directed) polypeptide F
mm10_v2_chr1_+_50927511_50927543	0.103552	Nanog	ENSMUST00000081851.3|Tmeff2|ENSMUSG00000026109.8|transmembrane protein with EGF-like and two follistatin-like domains 2
mm10_v2_chr10_-_81364846_81364859	0.0983584	Nanog	ENSMUST00000131736.1|4930404N11Rik|ENSMUSG00000020234.4|RIKEN cDNA 4930404N11 gene
mm10_v2_chr17_+_20945311_20945355	0.0978571	Nanog	ENSMUST00000007708.7|Ppp2r1a|ENSMUSG00000007564.8|protein phosphatase 2 (formerly 2A), regulatory subunit A (PR 65), alpha isoform
mm10_v2_chr1_+_174501796_174501843	0.0951399	Nanog	ENSMUST00000030039.7|Fmn2|ENSMUSG00000028354.8|formin 2
mm10_v2_chr4_-_43046196_43046220	0.0937497	Nanog	ENSMUST00000036462.5|Fam214b|ENSMUSG00000036002.6|family with sequence similarity 214, member B
mm10_v2_chr13_-_12258093_12258134	0.0927529	Nanog	ENSMUST00000099856.4|Mtr|ENSMUSG00000021311.8|5-methyltetrahydrofolate-homocysteine methyltransferase
mm10_v2_chr12_+_109549157_109549301	0.0927364	Nanog	ENSMUST00000128458.1|Meg3|ENSMUSG00000021268.11|maternally expressed 3 	ENSMUST00000150851.1|Meg3|ENSMUSG00000021268.11|maternally expressed 3
mm10_v2_chr13_+_4233730_4233758	0.0916801	Nanog	ENSMUST00000081326.6|Akr1c19|ENSMUSG00000071551.6|aldo-keto reductase family 1, member C19
mm10_v2_chr4_-_149454971_149454986	0.0909468	Nanog	ENSMUST00000030848.2|Rbp7|ENSMUSG00000028996.3|retinol binding protein 7, cellular
mm10_v2_chr10_+_38965515_38965558	0.0890265	Nanog	ENSMUST00000019992.5|Lama4|ENSMUSG00000019846.5|laminin, alpha 4
mm10_v2_chr7_+_128246812_128246948	0.0882723	Nanog	ENSMUST00000164710.1|Tgfb1i1|ENSMUSG00000030782.9|transforming growth factor beta 1 induced transcript 1 	ENSMUST00000070656.5|Tgfb1i1|ENSMUSG00000030782.9|transforming growth factor beta 1 induced transcript 1
mm10_v2_chr4_+_154964117_154964147	0.0880158	Nanog	ENSMUST00000030931.4|Pank4|ENSMUSG00000029056.7|pantothenate kinase 4 	ENSMUST00000070953.4|Pank4|ENSMUSG00000029056.7|pantothenate kinase 4
mm10_v2_chr4_+_109343029_109343081	0.0875451	Nanog	ENSMUST00000030281.5|Eps15|ENSMUSG00000028552.7|epidermal growth factor receptor pathway substrate 15
mm10_v2_chr16_-_23520579_23520673	0.0870046	Nanog	ENSMUST00000089883.5|Masp1|ENSMUSG00000022887.8|mannan-binding lectin serine peptidase 1
mm10_v2_chr17_-_25919506_25919740	0.0857194	Nanog	ENSMUST00000164982.1|Rab40c|ENSMUSG00000025730.8|Rab40c, member RAS oncogene family 	ENSMUST00000179998.1|Rab40c|ENSMUSG00000025730.8|Rab40c, member RAS oncogene family 	ENSMUST00000167626.1|Rab40c|ENSMUSG00000025730.8|Rab40c, member RAS oncogene family 	ENSMUST00000164738.1|Rab40c|ENSMUSG00000025730.8|Rab40c, member RAS oncogene family 	ENSMUST00000026826.7|Rab40c|ENSMUSG00000025730.8|Rab40c, member RAS oncogene family 	ENSMUST00000167018.1|Rab40c|ENSMUSG00000025730.8|Rab40c, member RAS oncogene family
mm10_v2_chr4_+_101507947_101508032	0.0852564	Nanog	ENSMUST00000149047.1|Dnajc6|ENSMUSG00000028528.10|DnaJ (Hsp40) homolog, subfamily C, member 6 	ENSMUST00000106929.3|Dnajc6|ENSMUSG00000028528.10|DnaJ (Hsp40) homolog, subfamily C, member 6
mm10_v2_chr6_+_38551334_38551493	0.0815607	Nanog	ENSMUST00000163047.1|Luc7l2|ENSMUSG00000029823.10|LUC7-like 2 (S. cerevisiae) 	ENSMUST00000161538.1|Luc7l2|ENSMUSG00000029823.10|LUC7-like 2 (S. cerevisiae) 	ENSMUST00000057692.4|Luc7l2|ENSMUSG00000029823.10|LUC7-like 2 (S. cerevisiae)
mm10_v2_chr17_-_57247632_57247694	0.0814208	Nanog	ENSMUST00000005975.6|Gpr108|ENSMUSG00000005823.8|G protein-coupled receptor 108
mm10_v2_chr14_+_61607455_61607482	0.0801318	Nanog	ENSMUST00000051184.8|Kcnrg|ENSMUSG00000046168.8|potassium channel regulator
mm10_v2_chr18_+_57142782_57142796	0.079866	Nanog	ENSMUST00000139892.1|Megf10|ENSMUSG00000024593.9|multiple EGF-like-domains 10
mm10_v2_chr2_+_32363680_32363810	0.0778975	Nanog	ENSMUST00000113331.1|Ciz1|ENSMUSG00000039205.10|CDKN1A interacting zinc finger protein 1 	ENSMUST00000113338.2|Ciz1|ENSMUSG00000039205.10|CDKN1A interacting zinc finger protein 1
mm10_v2_chr7_+_103550368_103550368	0.0776288	Nanog	ENSMUST00000106888.1|Olfr613|ENSMUSG00000078624.2|olfactory receptor 613
mm10_v2_chr4_+_136310936_136310947	0.0771464	Nanog	ENSMUST00000131671.1|Hnrnpr|ENSMUSG00000066037.8|heterogeneous nuclear ribonucleoprotein R
mm10_v2_chr16_+_13671980_13672032	0.0759812	Nanog	ENSMUST00000069281.7|Bfar|ENSMUSG00000022684.8|bifunctional apoptosis regulator
mm10_v2_chr7_-_6011010_6011010	0.0759201	Nanog	ENSMUST00000086338.1|Vmn1r65|ENSMUSG00000066850.1|vomeronasal 1 receptor 65
mm10_v2_chr4_+_43059028_43059080	0.0757969	Nanog	ENSMUST00000163653.1|Unc13b|ENSMUSG00000028456.11|unc-13 homolog B (C. elegans) 	ENSMUST00000107952.2|Unc13b|ENSMUSG00000028456.11|unc-13 homolog B (C. elegans) 	ENSMUST00000107953.2|Unc13b|ENSMUSG00000028456.11|unc-13 homolog B (C. elegans)
mm10_v2_chr10_+_75037066_75037100	0.075727	Nanog	ENSMUST00000147802.1|Rab36|ENSMUSG00000020175.7|RAB36, member RAS oncogene family 	ENSMUST00000020391.5|Rab36|ENSMUSG00000020175.7|RAB36, member RAS oncogene family
mm10_v2_chr15_+_25773985_25774042	0.0744846	Nanog	ENSMUST00000125667.1|Myo10|ENSMUSG00000022272.11|myosin X
mm10_v2_chr7_+_110627650_110627669	0.0742629	Nanog	ENSMUST00000033054.8|Adm|ENSMUSG00000030790.8|adrenomedullin
mm10_v2_chr18_+_37518341_37518359	0.0733646	Nanog	ENSMUST00000097609.1|Pcdhb22|ENSMUSG00000073591.3|protocadherin beta 22
mm10_v2_chr13_+_44729794_44729807	0.0728879	Nanog	ENSMUST00000172830.1|Jarid2|ENSMUSG00000038518.9|jumonji, AT rich interactive domain 2
mm10_v2_chr7_-_100467149_100467190	0.0725338	Nanog	ENSMUST00000184420.1|RP23-308M1.2|ENSMUSG00000099137.1|RP23-308M1.2
mm10_v2_chr6_+_29348069_29348123	0.070039	Nanog	ENSMUST00000173216.1|Calu|ENSMUSG00000029767.10|calumenin 	ENSMUST00000031779.10|Calu|ENSMUSG00000029767.10|calumenin 	ENSMUST00000090481.7|Calu|ENSMUSG00000029767.10|calumenin
mm10_v2_chr11_-_23895208_23895280	0.0699389	Nanog	ENSMUST00000102863.2|Papolg|ENSMUSG00000020273.7|poly(A) polymerase gamma 	ENSMUST00000020513.3|Papolg|ENSMUSG00000020273.7|poly(A) polymerase gamma
mm10_v2_chr2_+_130576170_130576176	0.0697375	Nanog	ENSMUST00000028764.5|Oxt|ENSMUSG00000027301.7|oxytocin
mm10_v2_chr17_-_51826562_51826601	0.0696846	Nanog	ENSMUST00000024720.4|Satb1|ENSMUSG00000023927.9|special AT-rich sequence binding protein 1 	ENSMUST00000129667.1|Satb1|ENSMUSG00000023927.9|special AT-rich sequence binding protein 1 	ENSMUST00000156051.1|Satb1|ENSMUSG00000023927.9|special AT-rich sequence binding protein 1 	ENSMUST00000169480.1|Satb1|ENSMUSG00000023927.9|special AT-rich sequence binding protein 1 	ENSMUST00000148559.1|Satb1|ENSMUSG00000023927.9|special AT-rich sequence binding protein 1
mm10_v2_chr4_+_136310952_136310984	0.0695961	Nanog	ENSMUST00000105850.1|Hnrnpr|ENSMUSG00000066037.8|heterogeneous nuclear ribonucleoprotein R 	ENSMUST00000148843.3|Hnrnpr|ENSMUSG00000066037.8|heterogeneous nuclear ribonucleoprotein R
mm10_v2_chr13_+_111686303_111686351	0.0687782	Nanog	ENSMUST00000047412.4|Mier3|ENSMUSG00000032727.7|mesoderm induction early response 1, family member 3 	ENSMUST00000109271.2|Mier3|ENSMUSG00000032727.7|mesoderm induction early response 1, family member 3
mm10_v2_chr16_-_45724600_45724619	0.068748	Nanog	ENSMUST00000096057.4|Tagln3|ENSMUSG00000022658.10|transgelin 3
mm10_v2_chr2_+_3513035_3513074	0.0682491	Nanog	ENSMUST00000036350.2|Cdnf|ENSMUSG00000039496.2|cerebral dopamine neurotrophic factor
mm10_v2_chr6_+_38551786_38551851	0.0661488	Nanog	ENSMUST00000161227.1|Luc7l2|ENSMUSG00000029823.10|LUC7-like 2 (S. cerevisiae)
mm10_v2_chr19_+_60889749_60889749	0.0644152	Nanog	ENSMUST00000003313.8|Grk5|ENSMUSG00000003228.8|G protein-coupled receptor kinase 5
mm10_v2_chr10_-_115362191_115362262	0.0634366	Nanog	ENSMUST00000092170.5|Tmem19|ENSMUSG00000069520.5|transmembrane protein 19
mm10_v2_chr12_-_4038905_4038957	0.0633024	Nanog	ENSMUST00000111178.1|Efr3b|ENSMUSG00000020658.9|EFR3 homolog B (S. cerevisiae)
mm10_v2_chr16_+_16983454_16983567	0.063198	Nanog	ENSMUST00000115731.1|Mapk1|ENSMUSG00000063358.9|mitogen-activated protein kinase 1
mm10_v2_chr5_+_57718021_57718104	0.0624999	Nanog	ENSMUST00000094783.3|Pcdh7|ENSMUSG00000029108.8|protocadherin 7 	ENSMUST00000068110.7|Pcdh7|ENSMUSG00000029108.8|protocadherin 7
mm10_v2_chr12_+_102128718_102128739	0.0575709	Nanog	ENSMUST00000159329.1|Slc24a4|ENSMUSG00000041771.7|solute carrier family 24 (sodium/potassium/calcium exchanger), member 4
mm10_v2_chr9_-_58159201_58159239	0.0561841	Nanog	ENSMUST00000041477.7|Islr|ENSMUSG00000037206.8|immunoglobulin superfamily containing leucine-rich repeat
mm10_v2_chr17_+_25727726_25727797	0.0561583	Nanog	ENSMUST00000047273.1|Rpusd1|ENSMUSG00000041199.2|RNA pseudouridylate synthase domain containing 1
mm10_v2_chr4_+_101507855_101507871	0.0544053	Nanog	ENSMUST00000038207.5|Dnajc6|ENSMUSG00000028528.10|DnaJ (Hsp40) homolog, subfamily C, member 6
mm10_v2_chr12_-_83921809_83921898	0.0539489	Nanog	ENSMUST00000135962.1|Numb|ENSMUSG00000021224.8|numb gene homolog (Drosophila) 	ENSMUST00000155112.1|Numb|ENSMUSG00000021224.8|numb gene homolog (Drosophila) 	ENSMUST00000136848.1|Numb|ENSMUSG00000021224.8|numb gene homolog (Drosophila) 	ENSMUST00000126943.1|Numb|ENSMUSG00000021224.8|numb gene homolog (Drosophila)
mm10_v2_chr8_-_83594405_83594432	0.050232	Nanog	ENSMUST00000163837.1|Tecr|ENSMUSG00000031708.9|trans-2,3-enoyl-CoA reductase
mm10_v2_chr12_-_69790660_69790735	0.0496894	Nanog	ENSMUST00000021377.4|Cdkl1|ENSMUSG00000020990.4|cyclin-dependent kinase-like 1 (CDC2-related kinase)
mm10_v2_chr7_-_115846080_115846112	0.049647	Nanog	ENSMUST00000166207.1|Sox6|ENSMUSG00000051910.7|SRY-box containing gene 6
mm10_v2_chr7_-_141434532_141434605	0.0470864	Nanog	ENSMUST00000133021.1|Slc25a22|ENSMUSG00000019082.11|solute carrier family 25 (mitochondrial carrier, glutamate), member 22 	ENSMUST00000106007.3|Slc25a22|ENSMUSG00000019082.11|solute carrier family 25 (mitochondrial carrier, glutamate), member 22 	ENSMUST00000150026.1|Slc25a22|ENSMUSG00000019082.11|solute carrier family 25 (mitochondrial carrier, glutamate), member 22 	ENSMUST00000133206.2|Slc25a22|ENSMUSG00000019082.11|solute carrier family 25 (mitochondrial carrier, glutamate), member 22
mm10_v2_chr8_+_84415348_84415392	0.0462456	Nanog	ENSMUST00000121390.1|Cacna1a|ENSMUSG00000034656.10|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit 	ENSMUST00000122053.1|Cacna1a|ENSMUSG00000034656.10|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit
mm10_v2_chr7_+_128246953_128246993	0.0455335	Nanog	ENSMUST00000167965.1|Tgfb1i1|ENSMUSG00000030782.9|transforming growth factor beta 1 induced transcript 1
mm10_v2_chr3_+_65666223_65666259	0.0441838	Nanog	ENSMUST00000099075.2|Lekr1|ENSMUSG00000074579.7|leucine, glutamate and lysine rich 1 	ENSMUST00000107848.1|Lekr1|ENSMUSG00000074579.7|leucine, glutamate and lysine rich 1 	ENSMUST00000161794.1|Lekr1|ENSMUSG00000074579.7|leucine, glutamate and lysine rich 1
mm10_v2_chr16_+_18811772_18811832	0.0435481	Nanog	ENSMUST00000168822.1|Ufd1l|ENSMUSG00000005262.6|ubiquitin fusion degradation 1 like 	ENSMUST00000115578.3|Ufd1l|ENSMUSG00000005262.6|ubiquitin fusion degradation 1 like
mm10_v2_chr9_+_113930934_113930987	0.0433475	Nanog	ENSMUST00000084885.5|Ubp1|ENSMUSG00000009741.8|upstream binding protein 1 	ENSMUST00000009885.7|Ubp1|ENSMUSG00000009741.8|upstream binding protein 1
mm10_v2_chr11_-_107337556_107337637	0.0433097	Nanog	ENSMUST00000040380.6|Pitpnc1|ENSMUSG00000040430.12|phosphatidylinositol transfer protein, cytoplasmic 1
mm10_v2_chr1_+_172082796_172082855	0.0431934	Nanog	ENSMUST00000027833.5|Copa|ENSMUSG00000026553.11|coatomer protein complex subunit alpha
mm10_v2_chr8_-_36732897_36733054	0.0421604	Nanog	ENSMUST00000098826.3|Dlc1|ENSMUSG00000031523.10|deleted in liver cancer 1
mm10_v2_chr5_+_135168283_135168373	0.0390661	Nanog	ENSMUST00000031692.5|Bcl7b|ENSMUSG00000029681.6|B cell CLL/lymphoma 7B
mm10_v2_chr19_+_41933464_41933540	0.037641	Nanog	ENSMUST00000026154.7|Zdhhc16|ENSMUSG00000025157.7|zinc finger, DHHC domain containing 16
mm10_v2_chr6_-_124829398_124829484	0.0368017	Nanog	ENSMUST00000142058.1|Usp5|ENSMUSG00000038429.4|ubiquitin specific peptidase 5 (isopeptidase T) 	ENSMUST00000122110.1|Usp5|ENSMUSG00000038429.4|ubiquitin specific peptidase 5 (isopeptidase T) 	ENSMUST00000047510.3|Usp5|ENSMUSG00000038429.4|ubiquitin specific peptidase 5 (isopeptidase T)
mm10_v2_chr13_+_12565868_12565883	0.03593	Nanog	ENSMUST00000071973.6|Ero1lb|ENSMUSG00000057069.6|ERO1-like beta (S. cerevisiae)
mm10_v2_chr11_-_59839745_59839763	0.0335821	Nanog	ENSMUST00000141415.1|Cops3|ENSMUSG00000019373.5|COP9 (constitutive photomorphogenic) homolog, subunit 3 (Arabidopsis thaliana)
mm10_v2_chr1_+_153899937_153899953	0.0333054	Nanog	ENSMUST00000086199.5|Glul|ENSMUSG00000026473.9|glutamate-ammonia ligase (glutamine synthetase)
mm10_v2_chr12_+_36381519_36381594	0.0311551	Nanog	ENSMUST00000062041.5|Ispd|ENSMUSG00000043153.5|isoprenoid synthase domain containing
mm10_v2_chr16_+_16983382_16983416	0.0310809	Nanog	ENSMUST00000069107.7|Mapk1|ENSMUSG00000063358.9|mitogen-activated protein kinase 1 	ENSMUST00000023462.6|Mapk1|ENSMUSG00000063358.9|mitogen-activated protein kinase 1
mm10_v2_chr8_+_78509319_78509399	0.0306737	Nanog	ENSMUST00000034111.8|Slc10a7|ENSMUSG00000031684.10|solute carrier family 10 (sodium/bile acid cotransporter family), member 7
mm10_v2_chr5_+_135168382_135168442	0.0293769	Nanog	ENSMUST00000111187.3|Bcl7b|ENSMUSG00000029681.6|B cell CLL/lymphoma 7B 	ENSMUST00000111188.1|Bcl7b|ENSMUSG00000029681.6|B cell CLL/lymphoma 7B
mm10_v2_chr9_+_108490676_108490692	0.0269733	Nanog	ENSMUST00000178075.1|Usp19|ENSMUSG00000006676.10|ubiquitin specific peptidase 19 	ENSMUST00000085044.7|Usp19|ENSMUSG00000006676.10|ubiquitin specific peptidase 19 	ENSMUST00000166103.2|Usp19|ENSMUSG00000006676.10|ubiquitin specific peptidase 19 	ENSMUST00000006854.7|Usp19|ENSMUSG00000006676.10|ubiquitin specific peptidase 19
mm10_v2_chr6_+_34746368_34746393	0.0243351	Nanog	ENSMUST00000142716.1|Cald1|ENSMUSG00000029761.10|caldesmon 1
mm10_v2_chr8_-_35495487_35495545	0.0239282	Nanog	ENSMUST00000033927.6|Eri1|ENSMUSG00000031527.6|exoribonuclease 1
mm10_v2_chr13_-_47106176_47106206	0.0234152	Nanog	ENSMUST00000021807.6|Dek|ENSMUSG00000021377.8|DEK oncogene (DNA binding) 	ENSMUST00000135278.1|Dek|ENSMUSG00000021377.8|DEK oncogene (DNA binding)
mm10_v2_chr19_+_8802486_8802530	0.0230965	Nanog	ENSMUST00000172175.1|Zbtb3|ENSMUSG00000071661.6|zinc finger and BTB domain containing 3
mm10_v2_chr3_-_57301919_57301956	0.0229444	Nanog	ENSMUST00000029376.8|Tm4sf1|ENSMUSG00000027800.8|transmembrane 4 superfamily member 1
mm10_v2_chr15_-_97247287_97247315	0.0222419	Nanog	ENSMUST00000053106.5|Amigo2|ENSMUSG00000048218.5|adhesion molecule with Ig like domain 2
mm10_v2_chr11_+_95712673_95712673	0.0207356	Nanog	ENSMUST00000107717.1|Zfp652|ENSMUSG00000075595.3|zinc finger protein 652
mm10_v2_chr18_+_77185815_77185879	0.0196106	Nanog	ENSMUST00000079618.4|St8sia5|ENSMUSG00000025425.11|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5
mm10_v2_chr8_-_120589304_120589304	0.0190131	Nanog	ENSMUST00000034278.5|Gins2|ENSMUSG00000031821.5|GINS complex subunit 2 (Psf2 homolog)
mm10_v2_chr1_+_131153175_131153186	0.0182152	Nanog	ENSMUST00000112446.2|Eif2d|ENSMUSG00000026427.10|eukaryotic translation initiation factor 2D 	ENSMUST00000068805.7|Eif2d|ENSMUSG00000026427.10|eukaryotic translation initiation factor 2D 	ENSMUST00000068791.4|Eif2d|ENSMUSG00000026427.10|eukaryotic translation initiation factor 2D
mm10_v2_chr9_+_54538984_54538993	0.01729	Nanog	ENSMUST00000060242.5|Sh2d7|ENSMUSG00000046460.8|SH2 domain containing 7 	ENSMUST00000118413.1|Sh2d7|ENSMUSG00000046460.8|SH2 domain containing 7
mm10_v2_chr15_+_78428650_78428671	0.014462	Nanog	ENSMUST00000159771.1|Kctd17|ENSMUSG00000033287.9|potassium channel tetramerisation domain containing 17
mm10_v2_chr19_-_41933276_41933319	0.0141867	Nanog	ENSMUST00000075280.4|Exosc1|ENSMUSG00000034321.7|exosome component 1 	ENSMUST00000112123.2|Exosc1|ENSMUSG00000034321.7|exosome component 1
mm10_v2_chr4_-_9669068_9669162	0.0137488	Nanog	ENSMUST00000078139.6|Asph|ENSMUSG00000028207.12|aspartate-beta-hydroxylase 	ENSMUST00000108340.2|Asph|ENSMUSG00000028207.12|aspartate-beta-hydroxylase 	ENSMUST00000084915.4|Asph|ENSMUSG00000028207.12|aspartate-beta-hydroxylase 	ENSMUST00000108337.1|Asph|ENSMUSG00000028207.12|aspartate-beta-hydroxylase 	ENSMUST00000084912.5|Asph|ENSMUSG00000028207.12|aspartate-beta-hydroxylase 	ENSMUST00000038564.6|Asph|ENSMUSG00000028207.12|aspartate-beta-hydroxylase 	ENSMUST00000146441.1|Asph|ENSMUSG00000028207.12|aspartate-beta-hydroxylase 	ENSMUST00000098275.2|Asph|ENSMUSG00000028207.12|aspartate-beta-hydroxylase
mm10_v2_chr15_+_34453285_34453312	0.0135152	Nanog	ENSMUST00000060894.7|BC030476|ENSMUSG00000044726.7|cDNA sequence BC030476
mm10_v2_chr6_-_102464667_102464667	0.0128293	Nanog	ENSMUST00000032159.6|Cntn3|ENSMUSG00000030075.8|contactin 3
mm10_v2_chr1_-_172082757_172082795	0.00922111	Nanog	ENSMUST00000003550.4|Ncstn|ENSMUSG00000003458.6|nicastrin
mm10_v2_chr1_-_36445248_36445271	0.00802066	Nanog	ENSMUST00000125304.1|Lman2l|ENSMUSG00000001143.7|lectin, mannose-binding 2-like 	ENSMUST00000115011.1|Lman2l|ENSMUSG00000001143.7|lectin, mannose-binding 2-like
mm10_v2_chr7_+_28392916_28393013	0.00799936	Nanog	ENSMUST00000003529.8|Paf1|ENSMUSG00000003437.8|Paf1, RNA polymerase II associated factor, homolog (S. cerevisiae)
mm10_v2_chr5_-_135744206_135744271	0.00708866	Nanog	ENSMUST00000153399.1|Tmem120a|ENSMUSG00000039886.2|transmembrane protein 120A 	ENSMUST00000043378.2|Tmem120a|ENSMUSG00000039886.2|transmembrane protein 120A
mm10_v2_chr3_-_144760841_144760868	0.00481546	Nanog	ENSMUST00000059091.5|Clca1|ENSMUSG00000056025.6|chloride channel calcium activated 1
mm10_v2_chr17_-_59013264_59013372	0.00369055	Nanog	ENSMUST00000174122.1|Nudt12|ENSMUSG00000024228.6|nudix (nucleoside diphosphate linked moiety X)-type motif 12 	ENSMUST00000025065.5|Nudt12|ENSMUSG00000024228.6|nudix (nucleoside diphosphate linked moiety X)-type motif 12
mm10_v2_chr16_+_13671922_13671937	0.00368652	Nanog	ENSMUST00000035426.5|3110001I22Rik|ENSMUSG00000079737.3|RIKEN cDNA 3110001I22 gene
mm10_v2_chr8_+_46490968_46490995	0.00318552	Nanog	ENSMUST00000110372.1|Acsl1|ENSMUSG00000018796.6|acyl-CoA synthetase long-chain family member 1 	ENSMUST00000130563.1|Acsl1|ENSMUSG00000018796.6|acyl-CoA synthetase long-chain family member 1
mm10_v2_chr9_+_108662098_108662219	0.00317112	Nanog	ENSMUST00000035222.5|Slc25a20|ENSMUSG00000032602.5|solute carrier family 25 (mitochondrial carnitine/acylcarnitine translocase), member 20
mm10_v2_chr4_+_20008357_20008451	0.00277567	Nanog	ENSMUST00000117632.1|Ttpa|ENSMUSG00000073988.7|tocopherol (alpha) transfer protein 	ENSMUST00000098244.1|Ttpa|ENSMUSG00000073988.7|tocopherol (alpha) transfer protein
mm10_v2_chr2_+_160731684_160731760	0.00201794	Nanog	ENSMUST00000174885.1|Plcg1|ENSMUSG00000016933.11|phospholipase C, gamma 1 	ENSMUST00000109462.1|Plcg1|ENSMUSG00000016933.11|phospholipase C, gamma 1
mm10_v2_chr19_-_46395722_46395756	0.000531578	Nanog	ENSMUST00000040270.4|Actr1a|ENSMUSG00000025228.4|ARP1 actin-related protein 1A, centractin alpha
mm10_v2_chr3_+_103968110_103968446	0.000339818	Nanog	ENSMUST00000117150.1|Phtf1|ENSMUSG00000058388.8|putative homeodomain transcription factor 1 	ENSMUST00000063717.7|Phtf1|ENSMUSG00000058388.8|putative homeodomain transcription factor 1 	ENSMUST00000055425.8|Phtf1|ENSMUSG00000058388.8|putative homeodomain transcription factor 1 	ENSMUST00000123611.1|Phtf1|ENSMUSG00000058388.8|putative homeodomain transcription factor 1 	ENSMUST00000090685.4|Phtf1|ENSMUSG00000058388.8|putative homeodomain transcription factor 1
