mm10_v2_chr10_+_4611971_4612021	1.61395	Nkx2-4	ENSMUST00000105590.1|Esr1|ENSMUSG00000019768.10|estrogen receptor 1 (alpha) 	ENSMUST00000067086.7|Esr1|ENSMUSG00000019768.10|estrogen receptor 1 (alpha)
mm10_v2_chr13_-_66852017_66852017	1.41243	Nkx2-4	ENSMUST00000059329.6|Gm17449|ENSMUSG00000094740.1|predicted gene, 17449
mm10_v2_chr13_+_65512678_65512678	1.268	Nkx2-4	ENSMUST00000081471.2|Gm10139|ENSMUSG00000063905.2|predicted gene 10139
mm10_v2_chr1_+_178798438_178798467	0.917796	Nkx2-4	ENSMUST00000160789.1|Kif26b|ENSMUSG00000026494.6|kinesin family member 26B
mm10_v2_chr15_-_26895049_26895049	0.745402	Nkx2-4	ENSMUST00000059204.9|Fbxl7|ENSMUSG00000043556.9|F-box and leucine-rich repeat protein 7
mm10_v2_chr7_-_115824699_115824752	0.731207	Nkx2-4	ENSMUST00000169129.1|Sox6|ENSMUSG00000051910.7|SRY-box containing gene 6
mm10_v2_chr15_+_99055164_99055183	0.716218	Nkx2-4	ENSMUST00000047104.7|Prph|ENSMUSG00000023484.7|peripherin 	ENSMUST00000024249.3|Prph|ENSMUSG00000023484.7|peripherin
mm10_v2_chr12_-_91746020_91746089	0.611577	Nkx2-4	ENSMUST00000166967.1|Ston2|ENSMUSG00000020961.8|stonin 2
mm10_v2_chr14_+_48446128_48446276	0.604646	Nkx2-4	ENSMUST00000124720.1|Tmem260|ENSMUSG00000036339.11|transmembrane protein 260
mm10_v2_chr8_+_45628176_45628219	0.588079	Nkx2-4	ENSMUST00000130850.1|Sorbs2|ENSMUSG00000031626.10|sorbin and SH3 domain containing 2
mm10_v2_chr2_-_27507656_27507662	0.574702	Nkx2-4	ENSMUST00000154316.1|Brd3|ENSMUSG00000026918.10|bromodomain containing 3
mm10_v2_chr3_+_88629499_88629571	0.550297	Nkx2-4	ENSMUST00000175745.1|Arhgef2|ENSMUSG00000028059.8|rho/rac guanine nucleotide exchange factor (GEF) 2
mm10_v2_chr6_+_30568367_30568382	0.540211	Nkx2-4	ENSMUST00000049251.5|Cpa4|ENSMUSG00000039070.5|carboxypeptidase A4
mm10_v2_chr13_+_108316395_108316422	0.539054	Nkx2-4	ENSMUST00000171178.1|Depdc1b|ENSMUSG00000021697.6|DEP domain containing 1B
mm10_v2_chr11_+_98863610_98863646	0.524978	Nkx2-4	ENSMUST00000142414.1|Wipf2|ENSMUSG00000038013.8|WAS/WASL interacting protein family, member 2 	ENSMUST00000037480.8|Wipf2|ENSMUSG00000038013.8|WAS/WASL interacting protein family, member 2
mm10_v2_chr5_+_32136458_32136505	0.495334	Nkx2-4	ENSMUST00000031017.9|Fosl2|ENSMUSG00000029135.9|fos-like antigen 2
mm10_v2_chr8_+_45627946_45627975	0.459824	Nkx2-4	ENSMUST00000145458.1|Sorbs2|ENSMUSG00000031626.10|sorbin and SH3 domain containing 2
mm10_v2_chr7_-_132813095_132813162	0.455329	Nkx2-4	ENSMUST00000106165.1|Fam53b|ENSMUSG00000030956.9|family with sequence similarity 53, member B
mm10_v2_chr2_-_93046053_93046172	0.434185	Nkx2-4	ENSMUST00000111272.1|Prdm11|ENSMUSG00000075028.5|PR domain containing 11 	ENSMUST00000178666.1|Prdm11|ENSMUSG00000075028.5|PR domain containing 11 	ENSMUST00000147339.1|Prdm11|ENSMUSG00000075028.5|PR domain containing 11
mm10_v2_chr2_+_25180737_25180764	0.431163	Nkx2-4	ENSMUST00000104999.2|Nrarp|ENSMUSG00000078202.2|Notch-regulated ankyrin repeat protein
mm10_v2_chr7_-_100932140_100932200	0.415873	Nkx2-4	ENSMUST00000107032.1|Arhgef17|ENSMUSG00000032875.7|Rho guanine nucleotide exchange factor (GEF) 17
mm10_v2_chr3_+_52268337_52268388	0.414731	Nkx2-4	ENSMUST00000053764.5|Foxo1|ENSMUSG00000044167.5|forkhead box O1
mm10_v2_chr8_+_66860215_66860287	0.398387	Nkx2-4	ENSMUST00000118009.1|Naf1|ENSMUSG00000014907.9|nuclear assembly factor 1 homolog (S. cerevisiae)
mm10_v2_chr9_-_71896047_71896102	0.368176	Nkx2-4	ENSMUST00000184448.1|Tcf12|ENSMUSG00000032228.10|transcription factor 12
mm10_v2_chr11_+_101733011_101733041	0.367323	Nkx2-4	ENSMUST00000129741.1|Dhx8|ENSMUSG00000034931.9|DEAH (Asp-Glu-Ala-His) box polypeptide 8
mm10_v2_chr11_+_101732950_101732965	0.348223	Nkx2-4	ENSMUST00000039152.7|Dhx8|ENSMUSG00000034931.9|DEAH (Asp-Glu-Ala-His) box polypeptide 8
mm10_v2_chr11_+_87592897_87593006	0.343672	Nkx2-4	ENSMUST00000119628.1|Mtmr4|ENSMUSG00000018401.11|myotubularin related protein 4
mm10_v2_chr10_+_128232065_128232134	0.326757	Nkx2-4	ENSMUST00000055539.4|Timeless|ENSMUSG00000039994.9|timeless circadian clock 1 	ENSMUST00000105244.1|Timeless|ENSMUSG00000039994.9|timeless circadian clock 1 	ENSMUST00000105243.2|Timeless|ENSMUSG00000039994.9|timeless circadian clock 1 	ENSMUST00000125289.1|Timeless|ENSMUSG00000039994.9|timeless circadian clock 1 	ENSMUST00000105242.1|Timeless|ENSMUSG00000039994.9|timeless circadian clock 1
mm10_v2_chr14_-_47418407_47418407	0.311411	Nkx2-4	ENSMUST00000043296.3|Dlgap5|ENSMUSG00000037544.7|discs, large (Drosophila) homolog-associated protein 5
mm10_v2_chr12_-_105685235_105685310	0.310225	Nkx2-4	ENSMUST00000041055.7|Atg2b|ENSMUSG00000041341.9|autophagy related 2B
mm10_v2_chr11_-_102579461_102579538	0.301649	Nkx2-4	ENSMUST00000107081.1|Gm11627|ENSMUSG00000078640.3|predicted gene 11627
mm10_v2_chr1_+_97024681_97024681	0.289982	Nkx2-4	ENSMUST00000054664.7|Gm6430|ENSMUSG00000044757.7|predicted gene 6430
mm10_v2_chr12_+_38781093_38781129	0.278449	Nkx2-4	ENSMUST00000161513.1|Etv1|ENSMUSG00000004151.10|ets variant gene 1
mm10_v2_chr14_+_26514554_26514554	0.263181	Nkx2-4	ENSMUST00000104927.1|Gm2178|ENSMUSG00000078128.1|predicted gene 2178
mm10_v2_chr4_+_62525369_62525369	0.26049	Nkx2-4	ENSMUST00000062145.1|4933430I17Rik|ENSMUSG00000058046.1|RIKEN cDNA 4933430I17 gene
mm10_v2_chr2_+_157456917_157457085	0.237164	Nkx2-4	ENSMUST00000109529.1|Src|ENSMUSG00000027646.9|Rous sarcoma oncogene
mm10_v2_chrX_-_143933089_143933142	0.236272	Nkx2-4	ENSMUST00000087313.3|Dcx|ENSMUSG00000031285.8|doublecortin
mm10_v2_chr6_+_29398920_29398931	0.232633	Nkx2-4	ENSMUST00000181464.1|Ccdc136|ENSMUSG00000029769.10|coiled-coil domain containing 136 	ENSMUST00000180829.1|Ccdc136|ENSMUSG00000029769.10|coiled-coil domain containing 136
mm10_v2_chr8_-_40308331_40308331	0.232543	Nkx2-4	ENSMUST00000118639.1|Fgf20|ENSMUSG00000031603.8|fibroblast growth factor 20
mm10_v2_chr11_-_103697661_103697718	0.225702	Nkx2-4	ENSMUST00000107013.2|Gosr2|ENSMUSG00000020946.7|golgi SNAP receptor complex member 2
mm10_v2_chr2_+_156840966_156841017	0.219951	Nkx2-4	ENSMUST00000109564.1|Tgif2|ENSMUSG00000062175.7|TGFB-induced factor homeobox 2
mm10_v2_chr8_+_46490968_46490995	0.218652	Nkx2-4	ENSMUST00000110372.1|Acsl1|ENSMUSG00000018796.6|acyl-CoA synthetase long-chain family member 1 	ENSMUST00000130563.1|Acsl1|ENSMUSG00000018796.6|acyl-CoA synthetase long-chain family member 1
mm10_v2_chr10_+_20347788_20347859	0.1978	Nkx2-4	ENSMUST00000169712.1|Mtfr2|ENSMUSG00000019992.7|mitochondrial fission regulator 2
mm10_v2_chr2_+_30061754_30061859	0.196059	Nkx2-4	ENSMUST00000149578.1|Set|ENSMUSG00000054766.7|SET nuclear oncogene 	ENSMUST00000102866.3|Set|ENSMUSG00000054766.7|SET nuclear oncogene
mm10_v2_chr9_+_108560422_108560534	0.190862	Nkx2-4	ENSMUST00000081111.8|Impdh2|ENSMUSG00000062867.8|inosine 5'-phosphate dehydrogenase 2
mm10_v2_chr1_+_34439851_34439910	0.1858	Nkx2-4	ENSMUST00000027303.7|Imp4|ENSMUSG00000026127.7|IMP4, U3 small nucleolar ribonucleoprotein, homolog (yeast)
mm10_v2_chr1_-_118311132_118311221	0.170529	Nkx2-4	ENSMUST00000027623.7|Tsn|ENSMUSG00000026374.8|translin
mm10_v2_chr2_+_61804453_61804538	0.164115	Nkx2-4	ENSMUST00000048934.8|Tbr1|ENSMUSG00000035033.9|T-box brain gene 1
mm10_v2_chr3_+_121291725_121291817	0.163451	Nkx2-4	ENSMUST00000039442.7|Alg14|ENSMUSG00000039887.7|asparagine-linked glycosylation 14
mm10_v2_chr6_+_94500313_94500353	0.1634	Nkx2-4	ENSMUST00000061118.8|Slc25a26|ENSMUSG00000045100.9|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 26
mm10_v2_chr13_-_105271039_105271039	0.159209	Nkx2-4	ENSMUST00000069686.6|Rnf180|ENSMUSG00000021720.10|ring finger protein 180
mm10_v2_chr3_+_96696379_96696396	0.137717	Nkx2-4	ENSMUST00000107076.3|Pias3|ENSMUSG00000028101.12|protein inhibitor of activated STAT 3
mm10_v2_chr17_-_25844417_25844428	0.134558	Nkx2-4	ENSMUST00000176591.1|Rhot2|ENSMUSG00000025733.11|ras homolog gene family, member T2
mm10_v2_chr6_-_29165003_29165008	0.133991	Nkx2-4	ENSMUST00000007993.9|Rbm28|ENSMUSG00000029701.9|RNA binding motif protein 28
mm10_v2_chr2_-_34755229_34755252	0.133843	Nkx2-4	ENSMUST00000102800.1|Gapvd1|ENSMUSG00000026867.12|GTPase activating protein and VPS9 domains 1
mm10_v2_chr9_-_52679429_52679429	0.12818	Nkx2-4	ENSMUST00000098768.2|AI593442|ENSMUSG00000078307.2|expressed sequence AI593442
mm10_v2_chr5_+_34999111_34999184	0.114047	Nkx2-4	ENSMUST00000114283.1|Rgs12|ENSMUSG00000029101.8|regulator of G-protein signaling 12
mm10_v2_chr2_+_169632996_169633016	0.110047	Nkx2-4	ENSMUST00000109159.2|Tshz2|ENSMUSG00000047907.10|teashirt zinc finger family member 2
mm10_v2_chr1_-_34439672_34439672	0.0997041	Nkx2-4	ENSMUST00000042493.8|Ccdc115|ENSMUSG00000042111.8|coiled-coil domain containing 115
mm10_v2_chr8_-_31739763_31739763	0.0992044	Nkx2-4	ENSMUST00000178878.1|Gm5117|ENSMUSG00000093862.1|predicted gene 5117
mm10_v2_chr12_+_88360801_88360826	0.0968059	Nkx2-4	ENSMUST00000166940.1|Adck1|ENSMUSG00000021044.8|aarF domain containing kinase 1
mm10_v2_chr10_+_88091070_88091076	0.0964871	Nkx2-4	ENSMUST00000048621.7|Pmch|ENSMUSG00000035383.7|pro-melanin-concentrating hormone
mm10_v2_chr4_-_136892867_136893065	0.0959442	Nkx2-4	ENSMUST00000046332.5|C1qc|ENSMUSG00000036896.5|complement component 1, q subcomponent, C chain
mm10_v2_chr3_-_59220150_59220259	0.0889696	Nkx2-4	ENSMUST00000170388.1|P2ry12|ENSMUSG00000036353.7|purinergic receptor P2Y, G-protein coupled 12
mm10_v2_chr8_+_45627709_45627803	0.0884102	Nkx2-4	ENSMUST00000134321.1|Sorbs2|ENSMUSG00000031626.10|sorbin and SH3 domain containing 2 	ENSMUST00000135336.1|Sorbs2|ENSMUSG00000031626.10|sorbin and SH3 domain containing 2
mm10_v2_chr19_-_6969746_6969808	0.0839689	Nkx2-4	ENSMUST00000025912.8|Plcb3|ENSMUSG00000024960.8|phospholipase C, beta 3
mm10_v2_chr12_+_38780817_38780854	0.0795626	Nkx2-4	ENSMUST00000160856.1|Etv1|ENSMUSG00000004151.10|ets variant gene 1
mm10_v2_chr8_+_77549393_77549444	0.0726936	Nkx2-4	ENSMUST00000056237.8|Prmt10|ENSMUSG00000037134.10|protein arginine methyltransferase 10 (putative) 	ENSMUST00000118622.1|Prmt10|ENSMUSG00000037134.10|protein arginine methyltransferase 10 (putative)
mm10_v2_chr3_-_110250963_110251015	0.0677035	Nkx2-4	ENSMUST00000106567.1|Prmt6|ENSMUSG00000049300.10|protein arginine N-methyltransferase 6
mm10_v2_chr10_+_42502197_42502290	0.0585233	Nkx2-4	ENSMUST00000105499.1|Snx3|ENSMUSG00000019804.6|sorting nexin 3
mm10_v2_chr6_+_123229843_123229863	0.0444548	Nkx2-4	ENSMUST00000112554.2|Clec4n|ENSMUSG00000023349.8|C-type lectin domain family 4, member n 	ENSMUST00000024118.4|Clec4n|ENSMUSG00000023349.8|C-type lectin domain family 4, member n 	ENSMUST00000117130.1|Clec4n|ENSMUSG00000023349.8|C-type lectin domain family 4, member n
mm10_v2_chr17_+_84956718_84956745	0.0391742	Nkx2-4	ENSMUST00000112305.3|Ppm1b|ENSMUSG00000061130.6|protein phosphatase 1B, magnesium dependent, beta isoform
mm10_v2_chr6_+_96113146_96113170	0.0391318	Nkx2-4	ENSMUST00000122120.1|Fam19a1|ENSMUSG00000059187.6|family with sequence similarity 19, member A1
mm10_v2_chr7_-_44670820_44670862	0.0348169	Nkx2-4	ENSMUST00000048102.7|Myh14|ENSMUSG00000030739.11|myosin, heavy polypeptide 14
mm10_v2_chr12_+_69963452_69963474	0.0337078	Nkx2-4	ENSMUST00000110560.1|Gm3086|ENSMUSG00000079076.1|predicted gene 3086
mm10_v2_chr11_+_49247462_49247512	0.0332079	Nkx2-4	ENSMUST00000109194.1|Mgat1|ENSMUSG00000020346.10|mannoside acetylglucosaminyltransferase 1
mm10_v2_chr5_+_24685815_24685819	0.0288545	Nkx2-4	ENSMUST00000068825.6|Nub1|ENSMUSG00000028954.7|negative regulator of ubiquitin-like proteins 1
mm10_v2_chr5_-_137533297_137533311	0.0266858	Nkx2-4	ENSMUST00000111020.1|Gnb2|ENSMUSG00000029713.9|guanine nucleotide binding protein (G protein), beta 2 	ENSMUST00000111023.1|Gnb2|ENSMUSG00000029713.9|guanine nucleotide binding protein (G protein), beta 2
mm10_v2_chr2_+_169633517_169633676	0.0192907	Nkx2-4	ENSMUST00000109157.1|Tshz2|ENSMUSG00000047907.10|teashirt zinc finger family member 2
mm10_v2_chr14_+_55672235_55672298	0.0128308	Nkx2-4	ENSMUST00000002397.5|Gmpr2|ENSMUSG00000002326.5|guanosine monophosphate reductase 2
mm10_v2_chr10_-_26373956_26374088	0.00203583	Nkx2-4	ENSMUST00000105519.3|L3mbtl3|ENSMUSG00000039089.8|l(3)mbt-like 3 (Drosophila) 	ENSMUST00000040219.6|L3mbtl3|ENSMUSG00000039089.8|l(3)mbt-like 3 (Drosophila)
