mm10_v2_chr9_+_32696005_32696121	1.41759	Pax4	ENSMUST00000034534.6|Ets1|ENSMUSG00000032035.9|E26 avian leukemia oncogene 1, 5' domain 	ENSMUST00000050797.7|Ets1|ENSMUSG00000032035.9|E26 avian leukemia oncogene 1, 5' domain 	ENSMUST00000184887.1|Ets1|ENSMUSG00000032035.9|E26 avian leukemia oncogene 1, 5' domain
mm10_v2_chr15_-_79164477_79164496	1.15349	Pax4	ENSMUST00000040019.4|Sox10|ENSMUSG00000033006.9|SRY-box containing gene 10
mm10_v2_chr12_-_90738438_90738438	1.09429	Pax4	ENSMUST00000082432.3|Dio2|ENSMUSG00000007682.5|deiodinase, iodothyronine, type II
mm10_v2_chrX_+_9199865_9199907	1.0791	Pax4	ENSMUST00000069763.2|Lancl3|ENSMUSG00000047344.9|LanC lantibiotic synthetase component C-like 3 (bacterial)
mm10_v2_chr5_-_103100054_103100088	1.04095	Pax4	ENSMUST00000112848.1|Mapk10|ENSMUSG00000046709.10|mitogen-activated protein kinase 10
mm10_v2_chr4_-_88033328_88033373	0.916223	Pax4	ENSMUST00000078090.5|Mllt3|ENSMUSG00000028496.11|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3
mm10_v2_chr4_+_136284658_136284686	0.894199	Pax4	ENSMUST00000144217.1|Zfp46|ENSMUSG00000051351.8|zinc finger protein 46
mm10_v2_chr13_+_109632760_109632790	0.819502	Pax4	ENSMUST00000135275.1|Pde4d|ENSMUSG00000021699.11|phosphodiesterase 4D, cAMP specific
mm10_v2_chr4_+_136284708_136284775	0.76836	Pax4	ENSMUST00000130223.1|Zfp46|ENSMUSG00000051351.8|zinc finger protein 46
mm10_v2_chr12_+_71048338_71048356	0.747846	Pax4	ENSMUST00000135709.1|Arid4a|ENSMUSG00000048118.11|AT rich interactive domain 4A (RBP1-like)
mm10_v2_chr13_-_101768154_101768217	0.704897	Pax4	ENSMUST00000055518.6|Pik3r1|ENSMUSG00000041417.9|phosphatidylinositol 3-kinase, regulatory subunit, polypeptide 1 (p85 alpha)
mm10_v2_chr2_+_158667119_158667130	0.650572	Pax4	ENSMUST00000045503.4|Ppp1r16b|ENSMUSG00000037754.7|protein phosphatase 1, regulatory (inhibitor) subunit 16B
mm10_v2_chr11_+_62574523_62574552	0.634801	Pax4	ENSMUST00000018651.7|Trpv2|ENSMUSG00000018507.10|transient receptor potential cation channel, subfamily V, member 2
mm10_v2_chr12_+_33314277_33314328	0.579679	Pax4	ENSMUST00000133549.1|Atxn7l1|ENSMUSG00000020564.10|ataxin 7-like 1
mm10_v2_chr6_+_136518820_136518851	0.56912	Pax4	ENSMUST00000032335.6|Atf7ip|ENSMUSG00000030213.6|activating transcription factor 7 interacting protein
mm10_v2_chr12_-_98577940_98578046	0.565678	Pax4	ENSMUST00000110113.1|Kcnk10|ENSMUSG00000033854.9|potassium channel, subfamily K, member 10
mm10_v2_chr7_+_7171330_7171373	0.558553	Pax4	ENSMUST00000051435.7|Zfp418|ENSMUSG00000034538.7|zinc finger protein 418
mm10_v2_chr2_+_158666690_158666740	0.552975	Pax4	ENSMUST00000103116.3|Ppp1r16b|ENSMUSG00000037754.7|protein phosphatase 1, regulatory (inhibitor) subunit 16B
mm10_v2_chr8_-_84773381_84773427	0.538613	Pax4	ENSMUST00000109764.1|Nfix|ENSMUSG00000001911.10|nuclear factor I/X
mm10_v2_chrX_+_143518671_143518703	0.535353	Pax4	ENSMUST00000134402.1|Pak3|ENSMUSG00000031284.10|p21 protein (Cdc42/Rac)-activated kinase 3
mm10_v2_chr5_-_116288944_116288977	0.494559	Pax4	ENSMUST00000086483.3|Ccdc60|ENSMUSG00000043913.8|coiled-coil domain containing 60
mm10_v2_chr2_-_168741898_168741973	0.482285	Pax4	ENSMUST00000109176.1|Atp9a|ENSMUSG00000027546.9|ATPase, class II, type 9A 	ENSMUST00000178504.1|Atp9a|ENSMUSG00000027546.9|ATPase, class II, type 9A
mm10_v2_chrX_+_73192222_73192222	0.47786	Pax4	ENSMUST00000101486.4|Xlr3b|ENSMUSG00000073125.4|X-linked lymphocyte-regulated 3B
mm10_v2_chr2_+_73271925_73271939	0.461486	Pax4	ENSMUST00000090813.5|Sp9|ENSMUSG00000068859.5|trans-acting transcription factor 9
mm10_v2_chrX_+_142227923_142227951	0.455151	Pax4	ENSMUST00000042329.5|Nxt2|ENSMUSG00000042271.7|nuclear transport factor 2-like export factor 2
mm10_v2_chr6_+_47877204_47877204	0.452523	Pax4	ENSMUST00000061890.7|Zfp282|ENSMUSG00000025821.9|zinc finger protein 282
mm10_v2_chr9_-_48835932_48835962	0.424451	Pax4	ENSMUST00000093852.3|Zbtb16|ENSMUSG00000066687.4|zinc finger and BTB domain containing 16
mm10_v2_chrX_-_73097017_73097095	0.414726	Pax4	ENSMUST00000114524.2|Xlr3a|ENSMUSG00000057836.6|X-linked lymphocyte-regulated 3A 	ENSMUST00000074619.5|Xlr3a|ENSMUSG00000057836.6|X-linked lymphocyte-regulated 3A
mm10_v2_chr5_-_116591811_116591830	0.394091	Pax4	ENSMUST00000076124.5|Srrm4|ENSMUSG00000063919.6|serine/arginine repetitive matrix 4
mm10_v2_chrX_+_142228177_142228250	0.382248	Pax4	ENSMUST00000112914.1|Nxt2|ENSMUSG00000042271.7|nuclear transport factor 2-like export factor 2
mm10_v2_chr2_-_114175274_114175293	0.37875	Pax4	ENSMUST00000102543.4|Aqr|ENSMUSG00000040383.10|aquarius
mm10_v2_chr13_-_66851513_66851513	0.361939	Pax4	ENSMUST00000169322.1|Gm17404|ENSMUSG00000095206.1|predicted gene, 17404
mm10_v2_chr10_+_107271827_107271850	0.360892	Pax4	ENSMUST00000020057.8|Lin7a|ENSMUSG00000019906.8|lin-7 homolog A (C. elegans) 	ENSMUST00000105280.3|Lin7a|ENSMUSG00000019906.8|lin-7 homolog A (C. elegans)
mm10_v2_chr4_+_150281573_150281646	0.36066	Pax4	ENSMUST00000105682.2|Rere|ENSMUSG00000039852.10|arginine glutamic acid dipeptide (RE) repeats
mm10_v2_chr7_-_45366714_45366840	0.352617	Pax4	ENSMUST00000107779.1|Ppfia3|ENSMUSG00000003863.10|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 3
mm10_v2_chr15_-_88978958_88979007	0.340707	Pax4	ENSMUST00000042594.6|Mlc1|ENSMUSG00000035805.7|megalencephalic leukoencephalopathy with subcortical cysts 1 homolog (human) 	ENSMUST00000109368.1|Mlc1|ENSMUSG00000035805.7|megalencephalic leukoencephalopathy with subcortical cysts 1 homolog (human)
mm10_v2_chr10_+_90071095_90071117	0.333075	Pax4	ENSMUST00000183109.1|Anks1b|ENSMUSG00000058589.8|ankyrin repeat and sterile alpha motif domain containing 1B
mm10_v2_chr16_+_15637844_15637889	0.32778	Pax4	ENSMUST00000023352.8|Prkdc|ENSMUSG00000022672.8|protein kinase, DNA activated, catalytic polypeptide
mm10_v2_chr5_-_121502980_121502980	0.323874	Pax4	ENSMUST00000079368.3|Adam1b|ENSMUSG00000062438.3|a disintegrin and metallopeptidase domain 1b
mm10_v2_chr2_-_131328982_131328989	0.314476	Pax4	ENSMUST00000110194.1|Rnf24|ENSMUSG00000048911.9|ring finger protein 24
mm10_v2_chr2_-_168741752_168741800	0.314131	Pax4	ENSMUST00000029060.4|Atp9a|ENSMUSG00000027546.9|ATPase, class II, type 9A
mm10_v2_chr2_-_33086366_33086447	0.28843	Pax4	ENSMUST00000049618.2|Garnl3|ENSMUSG00000038860.9|GTPase activating RANGAP domain-like 3
mm10_v2_chr17_+_26941420_26941464	0.281499	Pax4	ENSMUST00000081285.3|Syngap1|ENSMUSG00000067629.4|synaptic Ras GTPase activating protein 1 homolog (rat) 	ENSMUST00000177932.1|Syngap1|ENSMUSG00000067629.4|synaptic Ras GTPase activating protein 1 homolog (rat)
mm10_v2_chr18_+_53862087_53862143	0.274806	Pax4	ENSMUST00000069597.6|Csnk1g3|ENSMUSG00000073563.2|casein kinase 1, gamma 3
mm10_v2_chr13_-_66852017_66852017	0.270495	Pax4	ENSMUST00000059329.6|Gm17449|ENSMUSG00000094740.1|predicted gene, 17449
mm10_v2_chrX_-_8206475_8206547	0.267647	Pax4	ENSMUST00000089403.3|Porcn|ENSMUSG00000031169.7|porcupine homolog (Drosophila) 	ENSMUST00000077595.5|Porcn|ENSMUSG00000031169.7|porcupine homolog (Drosophila) 	ENSMUST00000089402.3|Porcn|ENSMUSG00000031169.7|porcupine homolog (Drosophila) 	ENSMUST00000082320.5|Porcn|ENSMUSG00000031169.7|porcupine homolog (Drosophila)
mm10_v2_chr1_-_88008520_88008556	0.258939	Pax4	ENSMUST00000040783.4|Usp40|ENSMUSG00000005501.8|ubiquitin specific peptidase 40
mm10_v2_chr13_+_75089826_75089886	0.257282	Pax4	ENSMUST00000022075.4|Pcsk1|ENSMUSG00000021587.4|proprotein convertase subtilisin/kexin type 1
mm10_v2_chr4_+_136357423_136357541	0.250408	Pax4	ENSMUST00000182167.1|Gm17388|ENSMUSG00000097588.2|predicted gene, 17388
mm10_v2_chr9_-_101198999_101199080	0.245569	Pax4	ENSMUST00000066773.7|Ppp2r3a|ENSMUSG00000043154.9|protein phosphatase 2, regulatory subunit B'', alpha
mm10_v2_chr4_+_150087365_150087541	0.225854	Pax4	ENSMUST00000094451.3|Gpr157|ENSMUSG00000047875.6|G protein-coupled receptor 157
mm10_v2_chr10_+_127421208_127421235	0.222225	Pax4	ENSMUST00000168780.1|R3hdm2|ENSMUSG00000025404.9|R3H domain containing 2
mm10_v2_chr5_-_116288978_116288999	0.216194	Pax4	ENSMUST00000050178.6|Ccdc60|ENSMUSG00000043913.8|coiled-coil domain containing 60
mm10_v2_chr14_-_12823031_12823133	0.210962	Pax4	ENSMUST00000067491.6|Cadps|ENSMUSG00000054423.7|Ca2+-dependent secretion activator 	ENSMUST00000177814.1|Cadps|ENSMUSG00000054423.7|Ca2+-dependent secretion activator 	ENSMUST00000112658.1|Cadps|ENSMUSG00000054423.7|Ca2+-dependent secretion activator 	ENSMUST00000112657.2|Cadps|ENSMUSG00000054423.7|Ca2+-dependent secretion activator
mm10_v2_chr15_+_80977765_80977845	0.193159	Pax4	ENSMUST00000139517.1|Sgsm3|ENSMUSG00000042303.10|small G protein signaling modulator 3 	ENSMUST00000042506.8|Sgsm3|ENSMUSG00000042303.10|small G protein signaling modulator 3 	ENSMUST00000137255.1|Sgsm3|ENSMUSG00000042303.10|small G protein signaling modulator 3
mm10_v2_chr13_+_23738804_23738809	0.185466	Pax4	ENSMUST00000040914.1|Hist1h1c|ENSMUSG00000036181.1|histone cluster 1, H1c
mm10_v2_chr10_+_119992916_119992958	0.177914	Pax4	ENSMUST00000105261.2|Grip1|ENSMUSG00000034813.10|glutamate receptor interacting protein 1
mm10_v2_chr5_+_124552845_124552903	0.150264	Pax4	ENSMUST00000071057.7|Ddx55|ENSMUSG00000029389.11|DEAD (Asp-Glu-Ala-Asp) box polypeptide 55
mm10_v2_chr8_+_8689666_8689666	0.149381	Pax4	ENSMUST00000179702.1|B930078G14Rik|ENSMUSG00000094143.1|RIKEN cDNA B930078G14 gene
mm10_v2_chr13_-_23430826_23431022	0.144169	Pax4	ENSMUST00000153753.1|C230035I16Rik|ENSMUSG00000085024.1|RIKEN cDNA C230035I16 gene 	ENSMUST00000141543.1|C230035I16Rik|ENSMUSG00000085024.1|RIKEN cDNA C230035I16 gene
mm10_v2_chr4_+_146610961_146610961	0.12197	Pax4	ENSMUST00000130825.1|Gm13248|ENSMUSG00000063245.5|predicted gene 13248
mm10_v2_chr2_+_22895583_22895629	0.110527	Pax4	ENSMUST00000152170.1|Pdss1|ENSMUSG00000026784.8|prenyl (solanesyl) diphosphate synthase, subunit 1
mm10_v2_chr10_+_127421124_127421203	0.10545	Pax4	ENSMUST00000170336.1|R3hdm2|ENSMUSG00000025404.9|R3H domain containing 2
mm10_v2_chr12_-_84218835_84218890	0.105148	Pax4	ENSMUST00000046266.6|Elmsan1|ENSMUSG00000042507.8|ELM2 and Myb/SANT-like domain containing 1
mm10_v2_chr15_-_59374149_59374199	0.0722474	Pax4	ENSMUST00000022976.4|E430025E21Rik|ENSMUSG00000022350.6|RIKEN cDNA E430025E21 gene
mm10_v2_chr10_-_67548944_67549001	0.0662558	Pax4	ENSMUST00000075686.4|Ado|ENSMUSG00000057134.4|2-aminoethanethiol (cysteamine) dioxygenase
mm10_v2_chr4_+_125066672_125066715	0.0467315	Pax4	ENSMUST00000052183.6|Snip1|ENSMUSG00000050213.6|Smad nuclear interacting protein 1
mm10_v2_chr9_-_103222063_103222149	0.0453485	Pax4	ENSMUST00000170904.1|Trf|ENSMUSG00000032554.9|transferrin
mm10_v2_chr19_-_32712287_32712336	0.0430179	Pax4	ENSMUST00000070210.4|Atad1|ENSMUSG00000013662.5|ATPase family, AAA domain containing 1
mm10_v2_chr2_-_125506385_125506408	0.040581	Pax4	ENSMUST00000028633.6|Fbn1|ENSMUSG00000027204.7|fibrillin 1
mm10_v2_chr8_-_4217261_4217312	0.0264448	Pax4	ENSMUST00000168386.2|BC068157|ENSMUSG00000064125.8|cDNA sequence BC068157
mm10_v2_chr2_-_114654943_114654969	0.0106487	Pax4	ENSMUST00000028640.7|Dph6|ENSMUSG00000057147.7|diphthamine biosynthesis 6 	ENSMUST00000102542.3|Dph6|ENSMUSG00000057147.7|diphthamine biosynthesis 6
mm10_v2_chrX_+_143518576_143518599	0.0046408	Pax4	ENSMUST00000033640.7|Pak3|ENSMUSG00000031284.10|p21 protein (Cdc42/Rac)-activated kinase 3
mm10_v2_chr17_+_69383024_69383065	0.00330131	Pax4	ENSMUST00000112674.1|Zbtb14|ENSMUSG00000049672.8|zinc finger and BTB domain containing 14
