mm10_v2_chrX_+_103422010_103422010	2.65855	Pax6	ENSMUST00000182089.1|Gm26992|ENSMUSG00000098078.1|predicted gene, 26992
mm10_v2_chr11_-_95587691_95587735	1.30031	Pax6	ENSMUST00000000122.6|Ngfr|ENSMUSG00000000120.6|nerve growth factor receptor (TNFR superfamily, member 16)
mm10_v2_chr19_-_57118981_57119026	1.07171	Pax6	ENSMUST00000111528.1|Ablim1|ENSMUSG00000025085.10|actin-binding LIM protein 1 	ENSMUST00000111529.1|Ablim1|ENSMUSG00000025085.10|actin-binding LIM protein 1 	ENSMUST00000104902.2|Ablim1|ENSMUSG00000025085.10|actin-binding LIM protein 1
mm10_v2_chr19_-_57118897_57118979	1.04864	Pax6	ENSMUST00000111526.1|Ablim1|ENSMUSG00000025085.10|actin-binding LIM protein 1
mm10_v2_chr4_+_85205417_85205535	0.906421	Pax6	ENSMUST00000030212.8|Sh3gl2|ENSMUSG00000028488.9|SH3-domain GRB2-like 2 	ENSMUST00000107189.1|Sh3gl2|ENSMUSG00000028488.9|SH3-domain GRB2-like 2 	ENSMUST00000107184.1|Sh3gl2|ENSMUSG00000028488.9|SH3-domain GRB2-like 2
mm10_v2_chr17_+_43016536_43016591	0.888856	Pax6	ENSMUST00000024708.4|Tnfrsf21|ENSMUSG00000023915.4|tumor necrosis factor receptor superfamily, member 21
mm10_v2_chr10_+_26229707_26229763	0.790506	Pax6	ENSMUST00000060716.5|Samd3|ENSMUSG00000051354.7|sterile alpha motif domain containing 3 	ENSMUST00000164660.1|Samd3|ENSMUSG00000051354.7|sterile alpha motif domain containing 3
mm10_v2_chr3_-_89245159_89245199	0.652395	Pax6	ENSMUST00000090924.6|Trim46|ENSMUSG00000042766.11|tripartite motif-containing 46
mm10_v2_chr16_+_4968936_4968936	0.650097	Pax6	ENSMUST00000090457.5|4930451G09Rik|ENSMUSG00000022543.8|RIKEN cDNA 4930451G09 gene
mm10_v2_chr8_-_57962564_57962564	0.637014	Pax6	ENSMUST00000098757.3|Galntl6|ENSMUSG00000096914.1|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 6
mm10_v2_chr6_-_60829826_60829855	0.597942	Pax6	ENSMUST00000163779.1|Snca|ENSMUSG00000025889.7|synuclein, alpha
mm10_v2_chr18_-_34373313_34373443	0.577508	Pax6	ENSMUST00000006027.5|Reep5|ENSMUSG00000005873.5|receptor accessory protein 5
mm10_v2_chr1_-_38836090_38836090	0.548743	Pax6	ENSMUST00000147695.1|Lonrf2|ENSMUSG00000048814.4|LON peptidase N-terminal domain and ring finger 2
mm10_v2_chr5_+_149265035_149265058	0.521541	Pax6	ENSMUST00000130144.1|Alox5ap|ENSMUSG00000060063.6|arachidonate 5-lipoxygenase activating protein 	ENSMUST00000071130.3|Alox5ap|ENSMUSG00000060063.6|arachidonate 5-lipoxygenase activating protein
mm10_v2_chr15_+_84669565_84669620	0.426914	Pax6	ENSMUST00000171460.1|Prr5|ENSMUSG00000036106.9|proline rich 5 (renal)
mm10_v2_chr18_+_37447641_37447674	0.365705	Pax6	ENSMUST00000052387.3|Pcdhb14|ENSMUSG00000044043.3|protocadherin beta 14
mm10_v2_chr13_+_64432479_64432557	0.355962	Pax6	ENSMUST00000021939.6|Cdk20|ENSMUSG00000021483.7|cyclin-dependent kinase 20
mm10_v2_chr5_-_142906702_142906754	0.347038	Pax6	ENSMUST00000167721.1|Actb|ENSMUSG00000029580.8|actin, beta 	ENSMUST00000163829.1|Actb|ENSMUSG00000029580.8|actin, beta 	ENSMUST00000100497.4|Actb|ENSMUSG00000029580.8|actin, beta
mm10_v2_chr13_-_113618549_113618565	0.342512	Pax6	ENSMUST00000109241.3|Snx18|ENSMUSG00000042364.10|sorting nexin 18
mm10_v2_chr3_-_89245005_89245031	0.339892	Pax6	ENSMUST00000107464.1|Trim46|ENSMUSG00000042766.11|tripartite motif-containing 46
mm10_v2_chr6_-_88045190_88045270	0.331061	Pax6	ENSMUST00000113596.1|Rab7|ENSMUSG00000079477.3|RAB7, member RAS oncogene family 	ENSMUST00000113600.3|Rab7|ENSMUSG00000079477.3|RAB7, member RAS oncogene family
mm10_v2_chr15_-_101850778_101850792	0.327784	Pax6	ENSMUST00000023790.3|Krt1|ENSMUSG00000046834.6|keratin 1
mm10_v2_chr9_+_50775347_50775369	0.318879	Pax6	ENSMUST00000159576.1|Alg9|ENSMUSG00000032059.7|asparagine-linked glycosylation 9 (alpha 1,2 mannosyltransferase)
mm10_v2_chr9_+_15239045_15239155	0.312332	Pax6	ENSMUST00000034413.6|Vstm5|ENSMUSG00000031937.6|V-set and transmembrane domain containing 5
mm10_v2_chr13_-_110280103_110280213	0.309411	Pax6	ENSMUST00000167824.1|Rab3c|ENSMUSG00000021700.9|RAB3C, member RAS oncogene family
mm10_v2_chr2_+_163602294_163602322	0.302155	Pax6	ENSMUST00000171696.1|Ttpal|ENSMUSG00000017679.10|tocopherol (alpha) transfer protein-like 	ENSMUST00000109408.3|Ttpal|ENSMUSG00000017679.10|tocopherol (alpha) transfer protein-like
mm10_v2_chr4_+_155491353_155491411	0.297799	Pax6	ENSMUST00000165335.1|Gnb1|ENSMUSG00000029064.9|guanine nucleotide binding protein (G protein), beta 1 	ENSMUST00000105616.3|Gnb1|ENSMUSG00000029064.9|guanine nucleotide binding protein (G protein), beta 1 	ENSMUST00000030940.7|Gnb1|ENSMUSG00000029064.9|guanine nucleotide binding protein (G protein), beta 1
mm10_v2_chr8_+_105860634_105860661	0.289674	Pax6	ENSMUST00000008594.7|Nutf2|ENSMUSG00000008450.7|nuclear transport factor 2
mm10_v2_chr14_+_34170640_34170655	0.289165	Pax6	ENSMUST00000104925.3|Rpl23a-ps3|ENSMUSG00000078126.3|ribosomal protein L23A, pseudogene 3
mm10_v2_chr6_-_118780324_118780324	0.27012	Pax6	ENSMUST00000112793.3|Cacna1c|ENSMUSG00000051331.8|calcium channel, voltage-dependent, L type, alpha 1C subunit 	ENSMUST00000075591.6|Cacna1c|ENSMUSG00000051331.8|calcium channel, voltage-dependent, L type, alpha 1C subunit 	ENSMUST00000078320.7|Cacna1c|ENSMUSG00000051331.8|calcium channel, voltage-dependent, L type, alpha 1C subunit 	ENSMUST00000112790.2|Cacna1c|ENSMUSG00000051331.8|calcium channel, voltage-dependent, L type, alpha 1C subunit
mm10_v2_chr11_-_67965631_67965663	0.268241	Pax6	ENSMUST00000021287.5|Wdr16|ENSMUSG00000020904.5|WD repeat domain 16 	ENSMUST00000126766.1|Wdr16|ENSMUSG00000020904.5|WD repeat domain 16
mm10_v2_chr1_+_156040909_156040925	0.262007	Pax6	ENSMUST00000065648.8|Tor1aip2|ENSMUSG00000050565.10|torsin A interacting protein 2 	ENSMUST00000097526.2|Tor1aip2|ENSMUSG00000050565.10|torsin A interacting protein 2
mm10_v2_chr16_-_22857514_22857576	0.231801	Pax6	ENSMUST00000004576.6|Tbccd1|ENSMUSG00000004462.6|TBCC domain containing 1
mm10_v2_chr12_-_45074457_45074493	0.231609	Pax6	ENSMUST00000053768.6|Stxbp6|ENSMUSG00000046314.9|syntaxin binding protein 6 (amisyn)
mm10_v2_chr5_-_18360384_18360473	0.2153	Pax6	ENSMUST00000074694.5|Gnai1|ENSMUSG00000057614.5|guanine nucleotide binding protein (G protein), alpha inhibiting 1
mm10_v2_chr2_+_163602331_163602359	0.211904	Pax6	ENSMUST00000152135.1|Ttpal|ENSMUSG00000017679.10|tocopherol (alpha) transfer protein-like
mm10_v2_chr8_-_80880479_80880499	0.208701	Pax6	ENSMUST00000034150.8|Gab1|ENSMUSG00000031714.8|growth factor receptor bound protein 2-associated protein 1
mm10_v2_chr9_-_62811592_62811659	0.204029	Pax6	ENSMUST00000034775.8|Fem1b|ENSMUSG00000032244.8|feminization 1 homolog b (C. elegans)
mm10_v2_chr11_-_6200411_6200446	0.200737	Pax6	ENSMUST00000066496.3|Nudcd3|ENSMUSG00000053838.8|NudC domain containing 3
mm10_v2_chr16_+_20498817_20498866	0.194806	Pax6	ENSMUST00000003320.6|Eif2b5|ENSMUSG00000003235.6|eukaryotic translation initiation factor 2B, subunit 5 epsilon
mm10_v2_chr6_-_145048809_145048821	0.189582	Pax6	ENSMUST00000032402.5|Bcat1|ENSMUSG00000030268.11|branched chain aminotransferase 1, cytosolic
mm10_v2_chr17_-_43543639_43543639	0.189072	Pax6	ENSMUST00000178772.1|Ankrd66|ENSMUSG00000096140.1|ankyrin repeat domain 66
mm10_v2_chr12_+_112976471_112976563	0.164773	Pax6	ENSMUST00000165079.1|Btbd6|ENSMUSG00000002803.7|BTB (POZ) domain containing 6 	ENSMUST00000002880.6|Btbd6|ENSMUSG00000002803.7|BTB (POZ) domain containing 6
mm10_v2_chr17_+_34604262_34604304	0.162569	Pax6	ENSMUST00000174041.1|Agpat1|ENSMUSG00000034254.11|1-acylglycerol-3-phosphate O-acyltransferase 1 (lysophosphatidic acid acyltransferase, alpha)
mm10_v2_chr2_+_105904629_105904685	0.161948	Pax6	ENSMUST00000037499.5|Immp1l|ENSMUSG00000042670.5|IMP1 inner mitochondrial membrane peptidase-like (S. cerevisiae)
mm10_v2_chr11_+_67966442_67966497	0.158708	Pax6	ENSMUST00000021286.4|Stx8|ENSMUSG00000020903.7|syntaxin 8 	ENSMUST00000108675.1|Stx8|ENSMUSG00000020903.7|syntaxin 8
mm10_v2_chr17_-_33718591_33718690	0.147309	Pax6	ENSMUST00000174040.1|March2|ENSMUSG00000079557.4|membrane-associated ring finger (C3HC4) 2 	ENSMUST00000173015.1|March2|ENSMUSG00000079557.4|membrane-associated ring finger (C3HC4) 2 	ENSMUST00000066121.6|March2|ENSMUSG00000079557.4|membrane-associated ring finger (C3HC4) 2 	ENSMUST00000172767.1|March2|ENSMUSG00000079557.4|membrane-associated ring finger (C3HC4) 2 	ENSMUST00000173329.1|March2|ENSMUSG00000079557.4|membrane-associated ring finger (C3HC4) 2
mm10_v2_chr1_-_195131536_195131588	0.143556	Pax6	ENSMUST00000075451.6|Cr1l|ENSMUSG00000016481.10|complement component (3b/4b) receptor 1-like
mm10_v2_chr7_+_12897800_12897885	0.142252	Pax6	ENSMUST00000055528.4|Zscan22|ENSMUSG00000054715.4|zinc finger and SCAN domain containing 22 	ENSMUST00000117189.1|Zscan22|ENSMUSG00000054715.4|zinc finger and SCAN domain containing 22 	ENSMUST00000120809.1|Zscan22|ENSMUSG00000054715.4|zinc finger and SCAN domain containing 22 	ENSMUST00000119989.1|Zscan22|ENSMUSG00000054715.4|zinc finger and SCAN domain containing 22
mm10_v2_chr17_+_25366550_25366550	0.140297	Pax6	ENSMUST00000069616.7|Tpsb2|ENSMUSG00000033825.9|tryptase beta 2
mm10_v2_chr3_+_65109343_65109420	0.140284	Pax6	ENSMUST00000159525.1|Kcnab1|ENSMUSG00000027827.10|potassium voltage-gated channel, shaker-related subfamily, beta member 1 	ENSMUST00000049230.8|Kcnab1|ENSMUSG00000027827.10|potassium voltage-gated channel, shaker-related subfamily, beta member 1
mm10_v2_chr19_+_6400611_6400623	0.133586	Pax6	ENSMUST00000113467.1|Rasgrp2|ENSMUSG00000032946.10|RAS, guanyl releasing protein 2
mm10_v2_chr4_-_3835595_3835665	0.131156	Pax6	ENSMUST00000138502.1|Rps20|ENSMUSG00000028234.6|ribosomal protein S20
mm10_v2_chr7_+_5051515_5051557	0.12257	Pax6	ENSMUST00000069324.5|Zfp580|ENSMUSG00000055633.5|zinc finger protein 580
mm10_v2_chr13_-_53377355_53377373	0.122069	Pax6	ENSMUST00000021920.6|Sptlc1|ENSMUSG00000021468.7|serine palmitoyltransferase, long chain base subunit 1
mm10_v2_chr9_+_105642957_105643036	0.121517	Pax6	ENSMUST00000065778.6|Pik3r4|ENSMUSG00000032571.7|phosphatidylinositol 3 kinase, regulatory subunit, polypeptide 4, p150
mm10_v2_chr17_-_57059795_57059863	0.113681	Pax6	ENSMUST00000040280.7|Slc25a23|ENSMUSG00000046329.8|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 23
mm10_v2_chr11_+_45852031_45852051	0.106336	Pax6	ENSMUST00000109261.3|Clint1|ENSMUSG00000006169.13|clathrin interactor 1 	ENSMUST00000109260.1|Clint1|ENSMUSG00000006169.13|clathrin interactor 1
mm10_v2_chr13_-_66905322_66905378	0.0927788	Pax6	ENSMUST00000021993.4|Uqcrb|ENSMUSG00000021520.4|ubiquinol-cytochrome c reductase binding protein
mm10_v2_chr8_+_109614417_109614517	0.0889572	Pax6	ENSMUST00000109242.1|Pkd1l3|ENSMUSG00000048827.5|polycystic kidney disease 1 like 3 	ENSMUST00000057344.2|Pkd1l3|ENSMUSG00000048827.5|polycystic kidney disease 1 like 3
mm10_v2_chr9_+_92250039_92250060	0.0862178	Pax6	ENSMUST00000093801.3|Plscr1|ENSMUSG00000032369.7|phospholipid scramblase 1
mm10_v2_chr13_-_24937585_24937691	0.0848413	Pax6	ENSMUST00000037615.6|Aldh5a1|ENSMUSG00000035936.6|aldhehyde dehydrogenase family 5, subfamily A1
mm10_v2_chr10_+_80356459_80356494	0.0838236	Pax6	ENSMUST00000039836.8|Plk5|ENSMUSG00000035486.8|polo-like kinase 5 	ENSMUST00000105351.1|Plk5|ENSMUSG00000035486.8|polo-like kinase 5
mm10_v2_chr2_-_162661075_162661147	0.0814532	Pax6	ENSMUST00000109442.1|Ptprt|ENSMUSG00000053141.10|protein tyrosine phosphatase, receptor type, T 	ENSMUST00000109445.2|Ptprt|ENSMUSG00000053141.10|protein tyrosine phosphatase, receptor type, T 	ENSMUST00000109443.1|Ptprt|ENSMUSG00000053141.10|protein tyrosine phosphatase, receptor type, T 	ENSMUST00000109441.1|Ptprt|ENSMUSG00000053141.10|protein tyrosine phosphatase, receptor type, T
mm10_v2_chr8_+_31150307_31150346	0.0782476	Pax6	ENSMUST00000098842.2|Tti2|ENSMUSG00000031577.9|TELO2 interacting protein 2
mm10_v2_chr10_+_94550852_94550876	0.0733669	Pax6	ENSMUST00000148910.1|Tmcc3|ENSMUSG00000020023.11|transmembrane and coiled coil domains 3 	ENSMUST00000117460.1|Tmcc3|ENSMUSG00000020023.11|transmembrane and coiled coil domains 3
mm10_v2_chr14_-_43819639_43819639	0.0726371	Pax6	ENSMUST00000100691.3|Ear1|ENSMUSG00000072601.4|eosinophil-associated, ribonuclease A family, member 1
mm10_v2_chr10_-_127030813_127030840	0.0682026	Pax6	ENSMUST00000040560.4|Tsfm|ENSMUSG00000040521.5|Ts translation elongation factor, mitochondrial
mm10_v2_chr6_-_113377376_113377396	0.0630298	Pax6	ENSMUST00000043333.2|Tada3|ENSMUSG00000048930.6|transcriptional adaptor 3
mm10_v2_chr4_-_139832920_139833007	0.0625232	Pax6	ENSMUST00000174681.1|Pax7|ENSMUSG00000028736.7|paired box gene 7
mm10_v2_chr15_+_103272893_103272911	0.0597759	Pax6	ENSMUST00000100162.3|Copz1|ENSMUSG00000060992.8|coatomer protein complex, subunit zeta 1
mm10_v2_chr1_-_180813534_180813583	0.0586351	Pax6	ENSMUST00000159789.1|H3f3a|ENSMUSG00000060743.6|H3 histone, family 3A 	ENSMUST00000081026.4|H3f3a|ENSMUSG00000060743.6|H3 histone, family 3A
mm10_v2_chr11_+_78328415_78328472	0.0581316	Pax6	ENSMUST00000048073.8|Pigs|ENSMUSG00000041958.10|phosphatidylinositol glycan anchor biosynthesis, class S
mm10_v2_chr6_+_123229843_123229863	0.0573389	Pax6	ENSMUST00000112554.2|Clec4n|ENSMUSG00000023349.8|C-type lectin domain family 4, member n 	ENSMUST00000024118.4|Clec4n|ENSMUSG00000023349.8|C-type lectin domain family 4, member n 	ENSMUST00000117130.1|Clec4n|ENSMUSG00000023349.8|C-type lectin domain family 4, member n
mm10_v2_chr4_+_129820702_129820709	0.0475246	Pax6	ENSMUST00000165853.1|Ptp4a2|ENSMUSG00000028788.8|protein tyrosine phosphatase 4a2
mm10_v2_chr1_+_43092588_43092588	0.0452273	Pax6	ENSMUST00000039080.3|8430432A02Rik|ENSMUSG00000041878.3|RIKEN cDNA 8430432A02 gene
mm10_v2_chrX_+_36795642_36795653	0.0448273	Pax6	ENSMUST00000016463.3|Slc25a5|ENSMUSG00000016319.3|solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 5
mm10_v2_chr9_-_10904697_10904726	0.043998	Pax6	ENSMUST00000162484.1|Cntn5|ENSMUSG00000039488.9|contactin 5
mm10_v2_chr2_-_75981967_75981967	0.035778	Pax6	ENSMUST00000099994.3|Ttc30a1|ENSMUSG00000075271.3|tetratricopeptide repeat domain 30A1
mm10_v2_chr11_-_104550392_104550419	0.035044	Pax6	ENSMUST00000106962.2|Cdc27|ENSMUSG00000020687.7|cell division cycle 27
mm10_v2_chr15_-_35938186_35938246	0.0263372	Pax6	ENSMUST00000014457.8|Cox6c|ENSMUSG00000014313.8|cytochrome c oxidase subunit VIc
mm10_v2_chr7_-_12775658_12775658	0.0234596	Pax6	ENSMUST00000046245.5|Zscan18|ENSMUSG00000070822.4|zinc finger and SCAN domain containing 18
mm10_v2_chr9_+_64179289_64179349	0.0197465	Pax6	ENSMUST00000034965.6|Snapc5|ENSMUSG00000032398.6|small nuclear RNA activating complex, polypeptide 5
mm10_v2_chr19_+_34290653_34290668	0.0184913	Pax6	ENSMUST00000025691.5|Fas|ENSMUSG00000024778.6|Fas (TNF receptor superfamily member 6) 	ENSMUST00000112472.2|Fas|ENSMUSG00000024778.6|Fas (TNF receptor superfamily member 6)
mm10_v2_chr7_+_141228766_141228813	0.0130183	Pax6	ENSMUST00000106027.2|Phrf1|ENSMUSG00000038611.10|PHD and ring finger domains 1
mm10_v2_chr10_-_127030789_127030812	0.011144	Pax6	ENSMUST00000120547.1|Tsfm|ENSMUSG00000040521.5|Ts translation elongation factor, mitochondrial 	ENSMUST00000152054.1|Tsfm|ENSMUSG00000040521.5|Ts translation elongation factor, mitochondrial
mm10_v2_chr11_+_60699718_60699750	0.00973019	Pax6	ENSMUST00000052346.3|Llgl1|ENSMUSG00000020536.6|lethal giant larvae homolog 1 (Drosophila)
mm10_v2_chr15_+_6299797_6299851	0.00609695	Pax6	ENSMUST00000159046.1|Dab2|ENSMUSG00000022150.10|disabled 2, mitogen-responsive phosphoprotein 	ENSMUST00000161040.1|Dab2|ENSMUSG00000022150.10|disabled 2, mitogen-responsive phosphoprotein
mm10_v2_chr2_-_105904484_105904564	0.00562052	Pax6	ENSMUST00000122965.1|Elp4|ENSMUSG00000027167.5|elongation protein 4 homolog (S. cerevisiae)
mm10_v2_chr13_-_97760588_97760633	0.00512535	Pax6	ENSMUST00000074072.3|Gm10260|ENSMUSG00000069117.3|predicted gene 10260
