mm10_v2_chr6_-_23248264_23248390	2.42458	Six6	ENSMUST00000031709.5|Fezf1|ENSMUSG00000029697.5|Fez family zinc finger 1
mm10_v2_chr14_+_67234620_67234645	1.90437	Six6	ENSMUST00000176029.1|Ebf2|ENSMUSG00000022053.7|early B cell factor 2
mm10_v2_chr9_+_98422961_98422961	1.38216	Six6	ENSMUST00000052068.9|Rbp1|ENSMUSG00000046402.9|retinol binding protein 1, cellular
mm10_v2_chr4_-_97584605_97584610	1.37156	Six6	ENSMUST00000107067.1|E130114P18Rik|ENSMUSG00000048747.8|RIKEN cDNA E130114P18 gene
mm10_v2_chr5_+_140607334_140607352	1.28663	Six6	ENSMUST00000031555.1|Lfng|ENSMUSG00000029570.1|LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
mm10_v2_chr4_-_97584612_97584643	1.28583	Six6	ENSMUST00000107068.2|E130114P18Rik|ENSMUSG00000048747.8|RIKEN cDNA E130114P18 gene
mm10_v2_chr11_+_98412461_98412566	1.11071	Six6	ENSMUST00000058295.5|Erbb2|ENSMUSG00000062312.5|v-erb-b2 erythroblastic leukemia viral oncogene homolog 2, neuro/glioblastoma derived oncogene homolog (avian)
mm10_v2_chr1_+_45311538_45311638	0.98358	Six6	ENSMUST00000087883.6|Col3a1|ENSMUSG00000026043.12|collagen, type III, alpha 1
mm10_v2_chr7_+_46847128_46847150	0.952688	Six6	ENSMUST00000005051.4|Ldha|ENSMUSG00000063229.8|lactate dehydrogenase A
mm10_v2_chr7_-_42578588_42578588	0.929562	Six6	ENSMUST00000179470.1|Gm21028|ENSMUSG00000094462.1|predicted gene, 21028
mm10_v2_chr11_+_78324200_78324236	0.906703	Six6	ENSMUST00000102478.3|Aldoc|ENSMUSG00000017390.9|aldolase C, fructose-bisphosphate
mm10_v2_chr8_-_94918012_94918098	0.875448	Six6	ENSMUST00000077955.5|Ccdc102a|ENSMUSG00000063605.5|coiled-coil domain containing 102A
mm10_v2_chr12_+_52097737_52097775	0.839067	Six6	ENSMUST00000040090.9|Nubpl|ENSMUSG00000035142.12|nucleotide binding protein-like
mm10_v2_chrX_-_142966709_142966734	0.765039	Six6	ENSMUST00000041317.2|Ammecr1|ENSMUSG00000042225.3|Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1
mm10_v2_chr5_+_144244432_144244457	0.713477	Six6	ENSMUST00000110695.1|Bri3|ENSMUSG00000047843.10|brain protein I3
mm10_v2_chr8_+_85026833_85026899	0.704172	Six6	ENSMUST00000047281.8|2310036O22Rik|ENSMUSG00000041203.8|RIKEN cDNA 2310036O22 gene
mm10_v2_chr10_-_128180265_128180307	0.688712	Six6	ENSMUST00000099139.1|Rbms2|ENSMUSG00000040043.9|RNA binding motif, single stranded interacting protein 2
mm10_v2_chr8_+_40423786_40423848	0.681672	Six6	ENSMUST00000049389.4|Zdhhc2|ENSMUSG00000039470.9|zinc finger, DHHC domain containing 2 	ENSMUST00000128166.1|Zdhhc2|ENSMUSG00000039470.9|zinc finger, DHHC domain containing 2 	ENSMUST00000167766.1|Zdhhc2|ENSMUSG00000039470.9|zinc finger, DHHC domain containing 2
mm10_v2_chr8_+_84831522_84831522	0.666818	Six6	ENSMUST00000036734.5|Gadd45gip1|ENSMUSG00000033751.5|growth arrest and DNA-damage-inducible, gamma interacting protein 1
mm10_v2_chr19_-_53589067_53589067	0.650041	Six6	ENSMUST00000095978.3|Nutf2-ps1|ENSMUSG00000071497.3|nuclear transport factor 2, pseudogene 1
mm10_v2_chr4_+_156013835_156013849	0.639262	Six6	ENSMUST00000030952.5|Tnfrsf4|ENSMUSG00000029075.6|tumor necrosis factor receptor superfamily, member 4
mm10_v2_chr1_+_74713551_74713574	0.638937	Six6	ENSMUST00000027356.5|Cyp27a1|ENSMUSG00000026170.5|cytochrome P450, family 27, subfamily a, polypeptide 1
mm10_v2_chr3_+_130068390_130068412	0.632009	Six6	ENSMUST00000076703.6|Gm9396|ENSMUSG00000063328.6|predicted gene 9396
mm10_v2_chr8_-_106573461_106573462	0.625851	Six6	ENSMUST00000073722.5|Gm10073|ENSMUSG00000060019.5|predicted pseudogene 10073
mm10_v2_chr3_-_37724321_37724490	0.61965	Six6	ENSMUST00000108105.1|Gm5148|ENSMUSG00000058174.7|predicted gene 5148 	ENSMUST00000079755.4|Gm5148|ENSMUSG00000058174.7|predicted gene 5148 	ENSMUST00000099128.1|Gm5148|ENSMUSG00000058174.7|predicted gene 5148
mm10_v2_chr9_-_114564315_114564369	0.617976	Six6	ENSMUST00000111816.2|Trim71|ENSMUSG00000079259.2|tripartite motif-containing 71
mm10_v2_chr4_-_43653542_43653557	0.604203	Six6	ENSMUST00000084646.4|Spag8|ENSMUSG00000066196.5|sperm associated antigen 8
mm10_v2_chr7_+_128062657_128062687	0.597596	Six6	ENSMUST00000120355.1|Itgam|ENSMUSG00000030786.12|integrin alpha M 	ENSMUST00000106240.2|Itgam|ENSMUSG00000030786.12|integrin alpha M 	ENSMUST00000098015.3|Itgam|ENSMUSG00000030786.12|integrin alpha M
mm10_v2_chr15_-_82244716_82244755	0.590321	Six6	ENSMUST00000089155.4|Cenpm|ENSMUSG00000068101.4|centromere protein M 	ENSMUST00000089157.3|Cenpm|ENSMUSG00000068101.4|centromere protein M
mm10_v2_chr18_+_35553401_35553421	0.586548	Six6	ENSMUST00000181664.1|Snhg4|ENSMUSG00000097769.1|small nucleolar RNA host gene 4 (non-protein coding)
mm10_v2_chr17_-_62606679_62606707	0.567489	Six6	ENSMUST00000163332.1|Efna5|ENSMUSG00000090425.1|ephrin A5
mm10_v2_chr8_+_69832633_69832712	0.566532	Six6	ENSMUST00000131637.2|Pbx4|ENSMUSG00000031860.11|pre B cell leukemia homeobox 4 	ENSMUST00000081503.6|Pbx4|ENSMUSG00000031860.11|pre B cell leukemia homeobox 4
mm10_v2_chr7_-_130547358_130547386	0.558682	Six6	ENSMUST00000160289.1|Nsmce4a|ENSMUSG00000040331.9|non-SMC element 4 homolog A (S. cerevisiae)
mm10_v2_chr7_-_101903783_101903786	0.53221	Six6	ENSMUST00000106969.1|Tomt|ENSMUSG00000078630.1|transmembrane O-methyltransferase
mm10_v2_chr7_+_30232310_30232350	0.53114	Six6	ENSMUST00000108193.1|Polr2i|ENSMUSG00000019738.9|polymerase (RNA) II (DNA directed) polypeptide I 	ENSMUST00000108192.1|Polr2i|ENSMUSG00000019738.9|polymerase (RNA) II (DNA directed) polypeptide I
mm10_v2_chr11_+_100319880_100319905	0.508805	Six6	ENSMUST00000049385.7|Eif1|ENSMUSG00000035530.7|eukaryotic translation initiation factor 1
mm10_v2_chr15_+_98571004_98571026	0.507815	Six6	ENSMUST00000023728.6|4930415O20Rik|ENSMUSG00000022993.6|RIKEN cDNA 4930415O20 gene
mm10_v2_chr11_-_102365111_102365280	0.505263	Six6	ENSMUST00000006749.9|Slc4a1|ENSMUSG00000006574.9|solute carrier family 4 (anion exchanger), member 1
mm10_v2_chr18_-_88927447_88927481	0.491022	Six6	ENSMUST00000147313.1|Socs6|ENSMUSG00000056153.8|suppressor of cytokine signaling 6
mm10_v2_chr19_-_5729618_5729700	0.487466	Six6	ENSMUST00000116558.2|Fam89b|ENSMUSG00000024939.6|family with sequence similarity 89, member B 	ENSMUST00000099955.3|Fam89b|ENSMUSG00000024939.6|family with sequence similarity 89, member B 	ENSMUST00000161368.1|Fam89b|ENSMUSG00000024939.6|family with sequence similarity 89, member B
mm10_v2_chrX_-_74373260_74373349	0.485888	Six6	ENSMUST00000073067.4|Slc10a3|ENSMUSG00000032806.7|solute carrier family 10 (sodium/bile acid cotransporter family), member 3 	ENSMUST00000037967.5|Slc10a3|ENSMUSG00000032806.7|solute carrier family 10 (sodium/bile acid cotransporter family), member 3
mm10_v2_chr5_+_21543525_21543590	0.478979	Six6	ENSMUST00000035651.4|Lrrc17|ENSMUSG00000039883.4|leucine rich repeat containing 17
mm10_v2_chr17_-_53539411_53539459	0.474409	Six6	ENSMUST00000056198.3|Pp2d1|ENSMUSG00000044957.3|protein phosphatase 2C-like domain containing 1
mm10_v2_chr4_-_43653560_43653594	0.470696	Six6	ENSMUST00000107870.2|Spag8|ENSMUSG00000066196.5|sperm associated antigen 8
mm10_v2_chr2_+_106693185_106693278	0.468516	Six6	ENSMUST00000111063.1|Mpped2|ENSMUSG00000016386.9|metallophosphoesterase domain containing 2
mm10_v2_chr14_+_58893465_58893506	0.459764	Six6	ENSMUST00000079960.1|Rpl13-ps3|ENSMUSG00000059835.1|ribosomal protein L13, pseudogene 3
mm10_v2_chr18_+_14424821_14424868	0.45013	Six6	ENSMUST00000069552.5|Gm5160|ENSMUSG00000055795.5|predicted gene 5160
mm10_v2_chr9_-_66975387_66975484	0.44295	Six6	ENSMUST00000034929.6|Lactb|ENSMUSG00000032370.7|lactamase, beta
mm10_v2_chr11_+_115564434_115564490	0.442477	Six6	ENSMUST00000021085.4|Nup85|ENSMUSG00000020739.5|nucleoporin 85
mm10_v2_chr10_+_128238034_128238069	0.441329	Six6	ENSMUST00000105245.2|Timeless|ENSMUSG00000039994.9|timeless circadian clock 1
mm10_v2_chr7_-_35647127_35647209	0.439207	Six6	ENSMUST00000120714.1|Pdcd5|ENSMUSG00000030417.9|programmed cell death 5
mm10_v2_chr13_-_66227573_66227573	0.433002	Six6	ENSMUST00000167981.2|Gm10772|ENSMUSG00000091347.2|predicted gene 10772
mm10_v2_chrY_-_6237995_6237995	0.432675	Six6	ENSMUST00000177612.1|Gm21746|ENSMUSG00000094346.1|predicted gene, 21746
mm10_v2_chr1_-_165708088_165708099	0.422628	Six6	ENSMUST00000040357.8|Rcsd1|ENSMUSG00000040723.8|RCSD domain containing 1 	ENSMUST00000097474.3|Rcsd1|ENSMUSG00000040723.8|RCSD domain containing 1
mm10_v2_chr3_+_108571699_108571699	0.419804	Six6	ENSMUST00000143054.1|Taf13|ENSMUSG00000048100.7|TAF13 RNA polymerase II, TATA box binding protein (TBP)-associated factor
mm10_v2_chr16_-_65562686_65562769	0.389818	Six6	ENSMUST00000004965.6|Chmp2b|ENSMUSG00000004843.6|charged multivesicular body protein 2B
mm10_v2_chr16_+_10835046_10835084	0.378109	Six6	ENSMUST00000037913.8|Rmi2|ENSMUSG00000037991.9|RMI2, RecQ mediated genome instability 2, homolog (S. cerevisiae)
mm10_v2_chr16_+_84774123_84774174	0.374295	Six6	ENSMUST00000114195.1|Jam2|ENSMUSG00000053062.9|junction adhesion molecule 2
mm10_v2_chr6_+_54264839_54264863	0.368295	Six6	ENSMUST00000146114.1|Chn2|ENSMUSG00000004633.11|chimerin (chimaerin) 2
mm10_v2_chr5_+_104046869_104046899	0.360749	Six6	ENSMUST00000031250.7|Nudt9|ENSMUSG00000029310.7|nudix (nucleoside diphosphate linked moiety X)-type motif 9
mm10_v2_chr18_+_56432116_56432163	0.356389	Six6	ENSMUST00000070166.5|Gramd3|ENSMUSG00000001700.9|GRAM domain containing 3
mm10_v2_chr7_+_43690418_43690418	0.356228	Six6	ENSMUST00000056329.6|Klk14|ENSMUSG00000044737.6|kallikrein related-peptidase 14
mm10_v2_chr11_-_106272927_106273006	0.354476	Six6	ENSMUST00000021052.9|Smarcd2|ENSMUSG00000078619.4|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2
mm10_v2_chrM_+_2743_2761	0.340193	Six6	ENSMUST00000082392.1|mt-Nd1|ENSMUSG00000064341.1|mitochondrially encoded NADH dehydrogenase 1
mm10_v2_chr12_+_84773262_84773319	0.33616	Six6	ENSMUST00000021667.5|Isca2|ENSMUSG00000021241.6|iron-sulfur cluster assembly 2 homolog (S. cerevisiae)
mm10_v2_chr5_-_88527841_88527891	0.32516	Six6	ENSMUST00000087033.3|Igj|ENSMUSG00000067149.3|immunoglobulin joining chain
mm10_v2_chrX_+_169685191_169685250	0.319068	Six6	ENSMUST00000112104.1|Mid1|ENSMUSG00000035299.10|midline 1 	ENSMUST00000112107.1|Mid1|ENSMUSG00000035299.10|midline 1
mm10_v2_chr5_+_123907175_123907292	0.317639	Six6	ENSMUST00000023869.8|Denr|ENSMUSG00000023106.9|density-regulated protein
mm10_v2_chr13_-_56895737_56895793	0.315287	Six6	ENSMUST00000022023.6|Trpc7|ENSMUSG00000021541.7|transient receptor potential cation channel, subfamily C, member 7 	ENSMUST00000109871.1|Trpc7|ENSMUSG00000021541.7|transient receptor potential cation channel, subfamily C, member 7
mm10_v2_chrX_-_74373218_74373249	0.309723	Six6	ENSMUST00000178691.1|Ubl4|ENSMUSG00000015290.9|ubiquitin-like 4 	ENSMUST00000114146.1|Slc10a3|ENSMUSG00000032806.7|solute carrier family 10 (sodium/bile acid cotransporter family), member 3
mm10_v2_chr1_-_128359610_128359698	0.309226	Six6	ENSMUST00000027601.4|Mcm6|ENSMUSG00000026355.5|minichromosome maintenance deficient 6 (MIS5 homolog, S. pombe) (S. cerevisiae)
mm10_v2_chr3_+_88207308_88207328	0.306576	Six6	ENSMUST00000180582.1|Gm3764|ENSMUSG00000097156.1|predicted gene 3764
mm10_v2_chr5_+_117319258_117319284	0.30632	Six6	ENSMUST00000111967.1|Vsig10|ENSMUSG00000066894.8|V-set and immunoglobulin domain containing 10
mm10_v2_chr17_-_27909206_27909264	0.297703	Six6	ENSMUST00000114848.1|Taf11|ENSMUSG00000024218.6|TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor
mm10_v2_chr9_-_121839460_121839465	0.296765	Six6	ENSMUST00000135986.2|Ccdc13|ENSMUSG00000079235.4|coiled-coil domain containing 13
mm10_v2_chr2_+_117249725_117249754	0.288393	Six6	ENSMUST00000028825.4|Fam98b|ENSMUSG00000027349.5|family with sequence similarity 98, member B
mm10_v2_chr19_-_55315980_55316038	0.285058	Six6	ENSMUST00000076891.5|Zdhhc6|ENSMUSG00000024982.9|zinc finger, DHHC domain containing 6
mm10_v2_chr5_-_31154152_31154253	0.284937	Six6	ENSMUST00000114632.1|Mpv17|ENSMUSG00000090262.1|MpV17 mitochondrial inner membrane protein 	ENSMUST00000114631.2|Mpv17|ENSMUSG00000090262.1|MpV17 mitochondrial inner membrane protein 	ENSMUST00000067186.6|Mpv17|ENSMUSG00000090262.1|MpV17 mitochondrial inner membrane protein 	ENSMUST00000137165.1|Mpv17|ENSMUSG00000090262.1|MpV17 mitochondrial inner membrane protein 	ENSMUST00000131391.1|Mpv17|ENSMUSG00000090262.1|MpV17 mitochondrial inner membrane protein 	ENSMUST00000141823.1|Mpv17|ENSMUSG00000090262.1|MpV17 mitochondrial inner membrane protein 	ENSMUST00000154241.1|Mpv17|ENSMUSG00000090262.1|MpV17 mitochondrial inner membrane protein
mm10_v2_chr11_-_99230998_99231019	0.282498	Six6	ENSMUST00000103133.3|Smarce1|ENSMUSG00000037935.10|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1
mm10_v2_chrX_+_103414461_103414481	0.280645	Six6	ENSMUST00000033691.4|Tsx|ENSMUSG00000031329.4|testis specific X-linked gene
mm10_v2_chr7_+_30231884_30231948	0.274363	Six6	ENSMUST00000019882.9|Polr2i|ENSMUSG00000019738.9|polymerase (RNA) II (DNA directed) polypeptide I
mm10_v2_chr19_+_8764934_8765034	0.272797	Six6	ENSMUST00000184663.1|Nxf1|ENSMUSG00000010097.7|nuclear RNA export factor 1
mm10_v2_chr17_+_56717759_56717819	0.272594	Six6	ENSMUST00000002452.6|Ndufa11|ENSMUSG00000002379.6|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 11
mm10_v2_chr5_+_140419248_140419377	0.272419	Six6	ENSMUST00000100507.3|Eif3b|ENSMUSG00000056076.9|eukaryotic translation initiation factor 3, subunit B
mm10_v2_chr3_-_9004686_9004750	0.26724	Six6	ENSMUST00000120143.1|Tpd52|ENSMUSG00000027506.9|tumor protein D52
mm10_v2_chr16_-_31275277_31275290	0.264022	Six6	ENSMUST00000060188.7|Ppp1r2|ENSMUSG00000047714.8|protein phosphatase 1, regulatory (inhibitor) subunit 2
mm10_v2_chr17_+_57279094_57279127	0.264008	Six6	ENSMUST00000169220.2|Vav1|ENSMUSG00000034116.11|vav 1 oncogene 	ENSMUST00000005889.9|Vav1|ENSMUSG00000034116.11|vav 1 oncogene 	ENSMUST00000112870.4|Vav1|ENSMUSG00000034116.11|vav 1 oncogene
mm10_v2_chr8_-_4275886_4275915	0.262882	Six6	ENSMUST00000003029.7|Timm44|ENSMUSG00000002949.8|translocase of inner mitochondrial membrane 44
mm10_v2_chr15_+_55557399_55557436	0.256151	Six6	ENSMUST00000022998.7|Mtbp|ENSMUSG00000022369.7|Mdm2, transformed 3T3 cell double minute p53 binding protein
mm10_v2_chr5_+_121204477_121204499	0.255051	Six6	ENSMUST00000031617.9|Rpl6|ENSMUSG00000029614.9|ribosomal protein L6
mm10_v2_chr2_+_131491764_131491943	0.242057	Six6	ENSMUST00000028806.5|Smox|ENSMUSG00000027333.12|spermine oxidase 	ENSMUST00000110179.2|Smox|ENSMUSG00000027333.12|spermine oxidase 	ENSMUST00000110189.2|Smox|ENSMUSG00000027333.12|spermine oxidase 	ENSMUST00000110182.2|Smox|ENSMUSG00000027333.12|spermine oxidase 	ENSMUST00000110183.2|Smox|ENSMUSG00000027333.12|spermine oxidase 	ENSMUST00000110186.2|Smox|ENSMUSG00000027333.12|spermine oxidase 	ENSMUST00000110188.1|Smox|ENSMUSG00000027333.12|spermine oxidase
mm10_v2_chr19_-_4625612_4625658	0.237869	Six6	ENSMUST00000025823.3|Rce1|ENSMUSG00000024889.3|RCE1 homolog, prenyl protein peptidase (S. cerevisiae)
mm10_v2_chr16_-_18876655_18876767	0.235689	Six6	ENSMUST00000023391.8|Mrpl40|ENSMUSG00000022706.9|mitochondrial ribosomal protein L40
mm10_v2_chr6_-_81965925_81965962	0.235468	Six6	ENSMUST00000032124.8|Mrpl19|ENSMUSG00000030045.10|mitochondrial ribosomal protein L19
mm10_v2_chr19_-_11336107_11336144	0.234196	Six6	ENSMUST00000056035.2|Ms4a7|ENSMUSG00000024672.5|membrane-spanning 4-domains, subfamily A, member 7 	ENSMUST00000067532.4|Ms4a7|ENSMUSG00000024672.5|membrane-spanning 4-domains, subfamily A, member 7
mm10_v2_chr8_+_61487715_61487751	0.233243	Six6	ENSMUST00000034058.6|Cbr4|ENSMUSG00000031641.7|carbonyl reductase 4 	ENSMUST00000126575.1|Cbr4|ENSMUSG00000031641.7|carbonyl reductase 4
mm10_v2_chr10_+_24595623_24595780	0.232044	Six6	ENSMUST00000176228.1|Ctgf|ENSMUSG00000019997.5|connective tissue growth factor 	ENSMUST00000129142.1|Ctgf|ENSMUSG00000019997.5|connective tissue growth factor
mm10_v2_chr4_+_134864536_134864601	0.224681	Six6	ENSMUST00000030627.7|Rhd|ENSMUSG00000028825.7|Rh blood group, D antigen
mm10_v2_chr1_+_171419027_171419052	0.222081	Six6	ENSMUST00000171362.1|Tstd1|ENSMUSG00000091166.1|thiosulfate sulfurtransferase (rhodanese)-like domain containing 1
mm10_v2_chr13_+_65512678_65512678	0.221925	Six6	ENSMUST00000081471.2|Gm10139|ENSMUSG00000063905.2|predicted gene 10139
mm10_v2_chr4_-_116651644_116651680	0.216515	Six6	ENSMUST00000030455.8|Akr1a1|ENSMUSG00000028692.8|aldo-keto reductase family 1, member A1 (aldehyde reductase)
mm10_v2_chr6_-_50382831_50382847	0.207198	Six6	ENSMUST00000114468.2|Osbpl3|ENSMUSG00000029822.9|oxysterol binding protein-like 3
mm10_v2_chrX_-_7947848_7947889	0.203354	Six6	ENSMUST00000115642.1|Hdac6|ENSMUSG00000031161.9|histone deacetylase 6 	ENSMUST00000033501.8|Hdac6|ENSMUSG00000031161.9|histone deacetylase 6 	ENSMUST00000145675.1|Hdac6|ENSMUSG00000031161.9|histone deacetylase 6
mm10_v2_chr9_-_50528641_50528698	0.197252	Six6	ENSMUST00000034570.5|Pts|ENSMUSG00000032067.5|6-pyruvoyl-tetrahydropterin synthase
mm10_v2_chr7_+_81762925_81762943	0.195571	Six6	ENSMUST00000042166.4|Fam103a1|ENSMUSG00000038646.7|family with sequence similarity 103, member A1
mm10_v2_chr19_-_4042165_4042242	0.193371	Six6	ENSMUST00000042700.9|Gstp2|ENSMUSG00000038155.9|glutathione S-transferase, pi 2
mm10_v2_chr13_+_100124850_100124924	0.19308	Six6	ENSMUST00000022147.8|Smn1|ENSMUSG00000021645.10|survival motor neuron 1 	ENSMUST00000091321.5|Smn1|ENSMUSG00000021645.10|survival motor neuron 1 	ENSMUST00000143937.1|Smn1|ENSMUSG00000021645.10|survival motor neuron 1
mm10_v2_chr8_+_69822429_69822592	0.191739	Six6	ENSMUST00000164890.1|Lpar2|ENSMUSG00000031861.9|lysophosphatidic acid receptor 2 	ENSMUST00000034325.4|Lpar2|ENSMUSG00000031861.9|lysophosphatidic acid receptor 2
mm10_v2_chr17_+_35241838_35241870	0.188236	Six6	ENSMUST00000173731.1|Ddx39b|ENSMUSG00000019432.9|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B
mm10_v2_chr19_+_4154606_4154629	0.184404	Six6	ENSMUST00000061086.8|Ptprcap|ENSMUSG00000045826.8|protein tyrosine phosphatase, receptor type, C polypeptide-associated protein
mm10_v2_chr15_+_38661904_38661981	0.179904	Six6	ENSMUST00000022904.6|Atp6v1c1|ENSMUSG00000022295.7|ATPase, H+ transporting, lysosomal V1 subunit C1
mm10_v2_chr14_-_77036081_77036081	0.17588	Six6	ENSMUST00000142300.1|Lacc1|ENSMUSG00000044350.8|laccase (multicopper oxidoreductase) domain containing 1
mm10_v2_chr1_+_97770158_97770209	0.172996	Six6	ENSMUST00000112844.3|Gin1|ENSMUSG00000026333.8|gypsy retrotransposon integrase 1 	ENSMUST00000112842.1|Gin1|ENSMUSG00000026333.8|gypsy retrotransposon integrase 1 	ENSMUST00000027571.6|Gin1|ENSMUSG00000026333.8|gypsy retrotransposon integrase 1
mm10_v2_chr7_-_30232186_30232272	0.166101	Six6	ENSMUST00000006254.5|Tbcb|ENSMUSG00000006095.6|tubulin folding cofactor B
mm10_v2_chr3_+_124321031_124321113	0.161019	Six6	ENSMUST00000058994.4|Tram1l1|ENSMUSG00000044528.4|translocation associated membrane protein 1-like 1
mm10_v2_chr7_-_141168671_141168936	0.159095	Six6	ENSMUST00000106033.3|Rnh1|ENSMUSG00000038650.8|ribonuclease/angiogenin inhibitor 1
mm10_v2_chr17_+_40811089_40811133	0.157745	Six6	ENSMUST00000024721.7|Rhag|ENSMUSG00000023926.7|Rhesus blood group-associated A glycoprotein
mm10_v2_chr12_+_105705970_105705987	0.157347	Six6	ENSMUST00000040876.5|Ak7|ENSMUSG00000041323.5|adenylate kinase 7
mm10_v2_chr1_-_165634451_165634576	0.156034	Six6	ENSMUST00000111435.2|Mpzl1|ENSMUSG00000026566.9|myelin protein zero-like 1 	ENSMUST00000068705.7|Mpzl1|ENSMUSG00000026566.9|myelin protein zero-like 1
mm10_v2_chr3_-_106547726_106547802	0.153927	Six6	ENSMUST00000039153.7|Cept1|ENSMUSG00000040774.9|choline/ethanolaminephosphotransferase 1 	ENSMUST00000148269.1|Cept1|ENSMUSG00000040774.9|choline/ethanolaminephosphotransferase 1 	ENSMUST00000068301.4|Cept1|ENSMUSG00000040774.9|choline/ethanolaminephosphotransferase 1
mm10_v2_chr12_-_113422730_113422744	0.151543	Six6	ENSMUST00000177715.1|Ighm|ENSMUSG00000076617.3|immunoglobulin heavy constant mu 	ENSMUST00000103426.1|Ighm|ENSMUSG00000076617.3|immunoglobulin heavy constant mu
mm10_v2_chr1_-_118982551_118982606	0.148448	Six6	ENSMUST00000159678.1|Gli2|ENSMUSG00000048402.8|GLI-Kruppel family member GLI2
mm10_v2_chr10_+_80603253_80603297	0.143839	Six6	ENSMUST00000180350.1|Scamp4|ENSMUSG00000078441.4|secretory carrier membrane protein 4
mm10_v2_chr6_-_115675871_115675964	0.143255	Six6	ENSMUST00000112949.1|Raf1|ENSMUSG00000000441.11|v-raf-leukemia viral oncogene 1
mm10_v2_chr5_+_90903864_90903899	0.141865	Six6	ENSMUST00000075433.6|Cxcl2|ENSMUSG00000058427.7|chemokine (C-X-C motif) ligand 2
mm10_v2_chr3_+_85574109_85574148	0.13101	Six6	ENSMUST00000127348.1|Pet112|ENSMUSG00000028085.6|PET112 homolog (S. cerevisiae) 	ENSMUST00000107672.1|Pet112|ENSMUSG00000028085.6|PET112 homolog (S. cerevisiae) 	ENSMUST00000107674.1|Pet112|ENSMUSG00000028085.6|PET112 homolog (S. cerevisiae)
mm10_v2_chr17_+_35241746_35241778	0.127363	Six6	ENSMUST00000068056.5|Ddx39b|ENSMUSG00000019432.9|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B 	ENSMUST00000174757.1|Ddx39b|ENSMUSG00000019432.9|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B
mm10_v2_chr5_-_100373484_100373527	0.123291	Six6	ENSMUST00000182433.1|Sec31a|ENSMUSG00000035325.10|Sec31 homolog A (S. cerevisiae)
mm10_v2_chr7_+_82611777_82611777	0.121673	Six6	ENSMUST00000172784.1|Adamtsl3|ENSMUSG00000070469.5|ADAMTS-like 3
mm10_v2_chr2_+_70661556_70661692	0.112969	Six6	ENSMUST00000112201.1|Gorasp2|ENSMUSG00000014959.6|golgi reassembly stacking protein 2 	ENSMUST00000028509.4|Gorasp2|ENSMUSG00000014959.6|golgi reassembly stacking protein 2 	ENSMUST00000133432.1|Gorasp2|ENSMUSG00000014959.6|golgi reassembly stacking protein 2 	ENSMUST00000112205.1|Gorasp2|ENSMUSG00000014959.6|golgi reassembly stacking protein 2
mm10_v2_chr11_+_58104138_58104191	0.112951	Six6	ENSMUST00000020822.5|Cnot8|ENSMUSG00000020515.7|CCR4-NOT transcription complex, subunit 8
mm10_v2_chr13_-_66852017_66852017	0.105259	Six6	ENSMUST00000059329.6|Gm17449|ENSMUSG00000094740.1|predicted gene, 17449
mm10_v2_chr4_+_42158092_42158092	0.0966213	Six6	ENSMUST00000098122.2|Gm13306|ENSMUSG00000073877.4|predicted gene 13306
mm10_v2_chr2_+_69790968_69790973	0.0891752	Six6	ENSMUST00000180290.1|Phospho2|ENSMUSG00000027088.4|phosphatase, orphan 2
mm10_v2_chr3_-_95133989_95134017	0.0872225	Six6	ENSMUST00000172572.2|Scnm1|ENSMUSG00000092607.3|sodium channel modifier 1 	ENSMUST00000173462.2|Scnm1|ENSMUSG00000092607.3|sodium channel modifier 1
mm10_v2_chr15_-_75894474_75894529	0.0837209	Six6	ENSMUST00000023237.6|Naprt1|ENSMUSG00000022574.6|nicotinate phosphoribosyltransferase domain containing 1
mm10_v2_chr11_-_28583995_28584105	0.0788036	Six6	ENSMUST00000146385.2|Ccdc85a|ENSMUSG00000032878.10|coiled-coil domain containing 85A
mm10_v2_chr2_-_13271419_13271437	0.0759827	Six6	ENSMUST00000028059.2|Rsu1|ENSMUSG00000026727.4|Ras suppressor protein 1
mm10_v2_chr11_+_60353324_60353408	0.072831	Six6	ENSMUST00000070805.6|Lrrc48|ENSMUSG00000056598.10|leucine rich repeat containing 48 	ENSMUST00000094140.2|Lrrc48|ENSMUSG00000056598.10|leucine rich repeat containing 48 	ENSMUST00000108723.2|Lrrc48|ENSMUSG00000056598.10|leucine rich repeat containing 48 	ENSMUST00000108722.4|Lrrc48|ENSMUSG00000056598.10|leucine rich repeat containing 48
mm10_v2_chr11_-_100650693_100650749	0.065168	Six6	ENSMUST00000103119.3|Zfp385c|ENSMUSG00000014198.9|zinc finger protein 385C
mm10_v2_chr4_+_11758147_11758220	0.0610456	Six6	ENSMUST00000029871.5|Cdh17|ENSMUSG00000028217.5|cadherin 17 	ENSMUST00000108303.1|Cdh17|ENSMUSG00000028217.5|cadherin 17
mm10_v2_chr11_+_58104229_58104366	0.0607812	Six6	ENSMUST00000108843.1|Cnot8|ENSMUSG00000020515.7|CCR4-NOT transcription complex, subunit 8 	ENSMUST00000134896.1|Cnot8|ENSMUSG00000020515.7|CCR4-NOT transcription complex, subunit 8
mm10_v2_chr8_-_40634776_40634806	0.0555885	Six6	ENSMUST00000048898.10|Mtmr7|ENSMUSG00000039431.10|myotubularin related protein 7 	ENSMUST00000174205.1|Mtmr7|ENSMUSG00000039431.10|myotubularin related protein 7
mm10_v2_chr17_-_23771543_23771595	0.0510441	Six6	ENSMUST00000086325.5|Flywch1|ENSMUSG00000040097.9|FLYWCH-type zinc finger 1
mm10_v2_chr7_+_81762947_81763050	0.0486874	Six6	ENSMUST00000133034.1|Fam103a1|ENSMUSG00000038646.7|family with sequence similarity 103, member A1
mm10_v2_chr6_-_8259098_8259173	0.0421984	Six6	ENSMUST00000012627.4|Rpa3|ENSMUSG00000012483.4|replication protein A3
mm10_v2_chr11_-_60417022_60417056	0.0375964	Six6	ENSMUST00000108721.1|Atpaf2|ENSMUSG00000042709.8|ATP synthase mitochondrial F1 complex assembly factor 2
mm10_v2_chr5_+_122210134_122210295	0.034445	Six6	ENSMUST00000100747.2|Hvcn1|ENSMUSG00000064267.7|hydrogen voltage-gated channel 1
mm10_v2_chr19_+_25672408_25672420	0.032414	Six6	ENSMUST00000053068.5|Dmrt2|ENSMUSG00000048138.9|doublesex and mab-3 related transcription factor 2
mm10_v2_chr16_-_45724600_45724619	0.0322636	Six6	ENSMUST00000096057.4|Tagln3|ENSMUSG00000022658.10|transgelin 3
mm10_v2_chr16_-_92466081_92466187	0.0310521	Six6	ENSMUST00000060005.8|Rcan1|ENSMUSG00000022951.9|regulator of calcineurin 1
mm10_v2_chr8_-_121829480_121829571	0.0298909	Six6	ENSMUST00000174717.1|Klhdc4|ENSMUSG00000040263.10|kelch domain containing 4 	ENSMUST00000174192.1|Klhdc4|ENSMUSG00000040263.10|kelch domain containing 4 	ENSMUST00000045884.10|Klhdc4|ENSMUSG00000040263.10|kelch domain containing 4
mm10_v2_chr2_-_13271268_13271348	0.0201805	Six6	ENSMUST00000137670.1|Rsu1|ENSMUSG00000026727.4|Ras suppressor protein 1 	ENSMUST00000114791.2|Rsu1|ENSMUSG00000026727.4|Ras suppressor protein 1
mm10_v2_chr2_-_103797617_103797662	0.0200688	Six6	ENSMUST00000028607.6|Caprin1|ENSMUSG00000027184.8|cell cycle associated protein 1
mm10_v2_chr7_-_104315455_104315463	0.0197899	Six6	ENSMUST00000106837.1|Trim12a|ENSMUSG00000066258.7|tripartite motif-containing 12A 	ENSMUST00000106839.2|Trim12a|ENSMUSG00000066258.7|tripartite motif-containing 12A 	ENSMUST00000070943.6|Trim12a|ENSMUSG00000066258.7|tripartite motif-containing 12A
mm10_v2_chr10_+_73821857_73821883	0.0197251	Six6	ENSMUST00000177128.1|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000064562.7|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000129404.2|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000105426.3|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000131321.2|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000126920.2|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000147189.2|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000105424.3|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000092420.6|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000105429.3|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000131724.2|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000152655.2|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000151116.2|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000155701.2|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000152819.2|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000125517.2|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000124046.1|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000149977.2|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000146682.1|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000177107.1|Pcdh15|ENSMUSG00000052613.10|protocadherin 15
mm10_v2_chr11_-_105937798_105937871	0.015706	Six6	ENSMUST00000183493.1|Cyb561|ENSMUSG00000019590.10|cytochrome b-561
mm10_v2_chr8_+_71951038_71951130	0.0139666	Six6	ENSMUST00000131237.1|Zfp961|ENSMUSG00000052446.10|zinc finger protein 961 	ENSMUST00000136516.1|Zfp961|ENSMUSG00000052446.10|zinc finger protein 961 	ENSMUST00000109997.2|Zfp961|ENSMUSG00000052446.10|zinc finger protein 961 	ENSMUST00000132848.1|Zfp961|ENSMUSG00000052446.10|zinc finger protein 961
mm10_v2_chrX_-_111536325_111536342	0.0134929	Six6	ENSMUST00000156639.1|Rps6ka6|ENSMUSG00000025665.10|ribosomal protein S6 kinase polypeptide 6
mm10_v2_chr7_+_127800844_127800941	0.00988912	Six6	ENSMUST00000106271.1|Hsd3b7|ENSMUSG00000042289.5|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7 	ENSMUST00000138432.1|Hsd3b7|ENSMUSG00000042289.5|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7
mm10_v2_chr15_-_76206309_76206357	0.00892713	Six6	ENSMUST00000073418.6|Plec|ENSMUSG00000022565.9|plectin 	ENSMUST00000171634.1|Plec|ENSMUSG00000022565.9|plectin 	ENSMUST00000076442.5|Plec|ENSMUSG00000022565.9|plectin
mm10_v2_chr6_+_115675983_115676004	0.00696295	Six6	ENSMUST00000068960.9|D830050J10Rik|ENSMUSG00000055396.9|RIKEN cDNA D830050J10 gene
mm10_v2_chr17_+_55959146_55959187	0.00436252	Six6	ENSMUST00000086869.4|Ccdc94|ENSMUSG00000003208.8|coiled-coil domain containing 94
