mm10_v2_chr13_-_29984219_29984353	1.50454	Zic3	ENSMUST00000146092.1|E2f3|ENSMUSG00000016477.11|E2F transcription factor 3
mm10_v2_chr7_+_127800604_127800696	1.14375	Zic3	ENSMUST00000046863.5|Hsd3b7|ENSMUSG00000042289.5|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7 	ENSMUST00000106272.1|Hsd3b7|ENSMUSG00000042289.5|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7 	ENSMUST00000139068.1|Hsd3b7|ENSMUSG00000042289.5|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7
mm10_v2_chrX_+_71050160_71050256	0.990789	Zic3	ENSMUST00000082088.3|Mamld1|ENSMUSG00000059401.7|mastermind-like domain containing 1 	ENSMUST00000114629.3|Mamld1|ENSMUSG00000059401.7|mastermind-like domain containing 1
mm10_v2_chr13_+_44729535_44729697	0.983978	Zic3	ENSMUST00000174068.1|Jarid2|ENSMUSG00000038518.9|jumonji, AT rich interactive domain 2
mm10_v2_chr1_+_166254095_166254156	0.936337	Zic3	ENSMUST00000111416.1|Ildr2|ENSMUSG00000040612.8|immunoglobulin-like domain containing receptor 2
mm10_v2_chr12_+_3806513_3806527	0.837174	Zic3	ENSMUST00000172719.1|Dnmt3a|ENSMUSG00000020661.9|DNA methyltransferase 3A
mm10_v2_chr17_+_86963279_86963303	0.789716	Zic3	ENSMUST00000139344.1|Rhoq|ENSMUSG00000024143.8|ras homolog gene family, member Q
mm10_v2_chr5_-_115436508_115436606	0.706321	Zic3	ENSMUST00000078701.3|4930430O22Rik|ENSMUSG00000057354.3|RIKEN cDNA 4930430O22 gene
mm10_v2_chr5_+_139543889_139543904	0.704242	Zic3	ENSMUST00000174792.1|Uncx|ENSMUSG00000029546.11|UNC homeobox 	ENSMUST00000031523.8|Uncx|ENSMUSG00000029546.11|UNC homeobox
mm10_v2_chr8_+_127064107_127064347	0.702569	Zic3	ENSMUST00000162536.1|Pard3|ENSMUSG00000025812.11|par-3 (partitioning defective 3) homolog (C. elegans) 	ENSMUST00000026921.6|Pard3|ENSMUSG00000025812.11|par-3 (partitioning defective 3) homolog (C. elegans) 	ENSMUST00000162665.1|Pard3|ENSMUSG00000025812.11|par-3 (partitioning defective 3) homolog (C. elegans) 	ENSMUST00000160766.1|Pard3|ENSMUSG00000025812.11|par-3 (partitioning defective 3) homolog (C. elegans) 	ENSMUST00000162602.1|Pard3|ENSMUSG00000025812.11|par-3 (partitioning defective 3) homolog (C. elegans) 	ENSMUST00000162531.1|Pard3|ENSMUSG00000025812.11|par-3 (partitioning defective 3) homolog (C. elegans) 	ENSMUST00000160581.1|Pard3|ENSMUSG00000025812.11|par-3 (partitioning defective 3) homolog (C. elegans) 	ENSMUST00000161355.1|Pard3|ENSMUSG00000025812.11|par-3 (partitioning defective 3) homolog (C. elegans) 	ENSMUST00000159537.1|Pard3|ENSMUSG00000025812.11|par-3 (partitioning defective 3) homolog (C. elegans)
mm10_v2_chrX_+_73639414_73639436	0.69395	Zic3	ENSMUST00000019701.8|Dusp9|ENSMUSG00000031383.8|dual specificity phosphatase 9
mm10_v2_chr7_-_49636847_49636851	0.687566	Zic3	ENSMUST00000032717.6|Dbx1|ENSMUSG00000030507.6|developing brain homeobox 1
mm10_v2_chr13_-_95891905_95891929	0.679661	Zic3	ENSMUST00000068603.6|Iqgap2|ENSMUSG00000021676.9|IQ motif containing GTPase activating protein 2
mm10_v2_chr8_+_4248188_4248219	0.679558	Zic3	ENSMUST00000110993.1|Gm14378|ENSMUSG00000089736.1|predicted gene 14378
mm10_v2_chr1_-_119053339_119053370	0.674055	Zic3	ENSMUST00000161301.1|Gli2|ENSMUSG00000048402.8|GLI-Kruppel family member GLI2 	ENSMUST00000161451.1|Gli2|ENSMUSG00000048402.8|GLI-Kruppel family member GLI2 	ENSMUST00000162607.1|Gli2|ENSMUSG00000048402.8|GLI-Kruppel family member GLI2
mm10_v2_chr8_-_18950932_18950975	0.670112	Zic3	ENSMUST00000055503.5|Xkr5|ENSMUSG00000039814.9|X Kell blood group precursor-related family, member 5 	ENSMUST00000095438.3|Xkr5|ENSMUSG00000039814.9|X Kell blood group precursor-related family, member 5
mm10_v2_chr7_+_73391160_73391296	0.641407	Zic3	ENSMUST00000128471.1|Rgma|ENSMUSG00000070509.9|RGM domain family, member A
mm10_v2_chr14_+_25607797_25607838	0.637392	Zic3	ENSMUST00000160229.1|Zmiz1|ENSMUSG00000007817.8|zinc finger, MIZ-type containing 1
mm10_v2_chrX_+_56454871_56454887	0.637301	Zic3	ENSMUST00000039374.2|Ddx26b|ENSMUSG00000035967.9|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B 	ENSMUST00000101553.2|Ddx26b|ENSMUSG00000035967.9|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B
mm10_v2_chr12_-_111813834_111813858	0.632675	Zic3	ENSMUST00000021715.5|Xrcc3|ENSMUSG00000021287.6|X-ray repair complementing defective repair in Chinese hamster cells 3
mm10_v2_chr15_-_94404258_94404327	0.60655	Zic3	ENSMUST00000035342.4|Adamts20|ENSMUSG00000022449.8|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 20 	ENSMUST00000155907.1|Adamts20|ENSMUSG00000022449.8|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 20
mm10_v2_chr2_-_160872985_160873009	0.605075	Zic3	ENSMUST00000109460.1|Zhx3|ENSMUSG00000035877.11|zinc fingers and homeoboxes 3 	ENSMUST00000127201.1|Zhx3|ENSMUSG00000035877.11|zinc fingers and homeoboxes 3
mm10_v2_chr13_+_44730726_44730838	0.594902	Zic3	ENSMUST00000173704.1|Jarid2|ENSMUSG00000038518.9|jumonji, AT rich interactive domain 2 	ENSMUST00000044608.7|Jarid2|ENSMUSG00000038518.9|jumonji, AT rich interactive domain 2 	ENSMUST00000173367.1|Jarid2|ENSMUSG00000038518.9|jumonji, AT rich interactive domain 2
mm10_v2_chr14_+_121035194_121035208	0.588385	Zic3	ENSMUST00000135010.1|Farp1|ENSMUSG00000025555.8|FERM, RhoGEF (Arhgef) and pleckstrin domain protein 1 (chondrocyte-derived)
mm10_v2_chr4_+_124986430_124986490	0.568948	Zic3	ENSMUST00000030687.7|Rspo1|ENSMUSG00000028871.7|R-spondin homolog (Xenopus laevis)
mm10_v2_chr2_+_120629113_120629224	0.540761	Zic3	ENSMUST00000150912.1|Stard9|ENSMUSG00000033705.10|START domain containing 9 	ENSMUST00000180041.1|Stard9|ENSMUSG00000033705.10|START domain containing 9
mm10_v2_chr7_+_88278085_88278141	0.536515	Zic3	ENSMUST00000032779.5|Ctsc|ENSMUSG00000030560.10|cathepsin C 	ENSMUST00000128791.1|Ctsc|ENSMUSG00000030560.10|cathepsin C
mm10_v2_chr11_-_100354040_100354143	0.512376	Zic3	ENSMUST00000173630.1|Hap1|ENSMUSG00000006930.9|huntingtin-associated protein 1
mm10_v2_chr2_+_84840612_84840640	0.508735	Zic3	ENSMUST00000111625.1|Slc43a1|ENSMUSG00000027075.10|solute carrier family 43, member 1
mm10_v2_chr5_+_107437908_107437997	0.507823	Zic3	ENSMUST00000094541.2|Btbd8|ENSMUSG00000070632.3|BTB (POZ) domain containing 8
mm10_v2_chr9_-_56418023_56418052	0.496581	Zic3	ENSMUST00000061552.8|C230081A13Rik|ENSMUSG00000074305.3|RIKEN cDNA C230081A13 gene
mm10_v2_chr4_+_108165449_108165524	0.496401	Zic3	ENSMUST00000116309.3|Echdc2|ENSMUSG00000028601.12|enoyl Coenzyme A hydratase domain containing 2 	ENSMUST00000116307.1|Echdc2|ENSMUSG00000028601.12|enoyl Coenzyme A hydratase domain containing 2
mm10_v2_chrY_-_1245753_1245766	0.488333	Zic3	ENSMUST00000154004.1|Uty|ENSMUSG00000068457.8|ubiquitously transcribed tetratricopeptide repeat gene, Y chromosome
mm10_v2_chr2_-_151009364_151009398	0.483872	Zic3	ENSMUST00000109896.1|Ninl|ENSMUSG00000068115.7|ninein-like
mm10_v2_chr12_+_3807076_3807160	0.482473	Zic3	ENSMUST00000174817.1|Dnmt3a|ENSMUSG00000020661.9|DNA methyltransferase 3A
mm10_v2_chr4_-_129614254_129614280	0.472838	Zic3	ENSMUST00000106037.2|Dcdc2b|ENSMUSG00000078552.4|doublecortin domain containing 2b 	ENSMUST00000179209.1|Dcdc2b|ENSMUSG00000078552.4|doublecortin domain containing 2b
mm10_v2_chr11_+_115900125_115900202	0.471584	Zic3	ENSMUST00000142089.1|Smim5|ENSMUSG00000048442.9|small integral membrane protein 5 	ENSMUST00000131566.1|Smim5|ENSMUSG00000048442.9|small integral membrane protein 5
mm10_v2_chrY_-_1245685_1245752	0.469723	Zic3	ENSMUST00000143286.1|Uty|ENSMUSG00000068457.8|ubiquitously transcribed tetratricopeptide repeat gene, Y chromosome 	ENSMUST00000137048.1|Uty|ENSMUSG00000068457.8|ubiquitously transcribed tetratricopeptide repeat gene, Y chromosome 	ENSMUST00000069309.7|Uty|ENSMUSG00000068457.8|ubiquitously transcribed tetratricopeptide repeat gene, Y chromosome 	ENSMUST00000139365.1|Uty|ENSMUSG00000068457.8|ubiquitously transcribed tetratricopeptide repeat gene, Y chromosome
mm10_v2_chrY_-_1286563_1286615	0.458029	Zic3	ENSMUST00000091190.5|Ddx3y|ENSMUSG00000069045.5|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked
mm10_v2_chr2_+_121295437_121295486	0.4516	Zic3	ENSMUST00000110639.1|Map1a|ENSMUSG00000027254.7|microtubule-associated protein 1 A
mm10_v2_chr8_+_4243264_4243387	0.448855	Zic3	ENSMUST00000110996.1|Map2k7|ENSMUSG00000002948.12|mitogen-activated protein kinase kinase 7
mm10_v2_chr11_-_34833631_34833663	0.443012	Zic3	ENSMUST00000093191.2|Spdl1|ENSMUSG00000069910.2|spindle apparatus coiled-coil protein 1
mm10_v2_chrX_-_108834303_108834381	0.435293	Zic3	ENSMUST00000101283.3|Brwd3|ENSMUSG00000063663.5|bromodomain and WD repeat domain containing 3 	ENSMUST00000150434.1|Brwd3|ENSMUSG00000063663.5|bromodomain and WD repeat domain containing 3
mm10_v2_chr8_+_127064022_127064086	0.43183	Zic3	ENSMUST00000160272.1|Pard3|ENSMUSG00000025812.11|par-3 (partitioning defective 3) homolog (C. elegans) 	ENSMUST00000079777.5|Pard3|ENSMUSG00000025812.11|par-3 (partitioning defective 3) homolog (C. elegans) 	ENSMUST00000162907.1|Pard3|ENSMUSG00000025812.11|par-3 (partitioning defective 3) homolog (C. elegans)
mm10_v2_chr9_-_108263887_108263965	0.424599	Zic3	ENSMUST00000166905.1|Dag1|ENSMUSG00000039952.9|dystroglycan 1 	ENSMUST00000080435.2|Dag1|ENSMUSG00000039952.9|dystroglycan 1
mm10_v2_chr7_-_48881032_48881050	0.424466	Zic3	ENSMUST00000058745.8|E2f8|ENSMUSG00000046179.11|E2F transcription factor 8
mm10_v2_chr7_-_17062384_17062427	0.422228	Zic3	ENSMUST00000153833.1|Hif3a|ENSMUSG00000004328.9|hypoxia inducible factor 3, alpha subunit 	ENSMUST00000108492.2|Hif3a|ENSMUSG00000004328.9|hypoxia inducible factor 3, alpha subunit
mm10_v2_chr8_+_127063893_127063916	0.419226	Zic3	ENSMUST00000162309.1|Pard3|ENSMUSG00000025812.11|par-3 (partitioning defective 3) homolog (C. elegans)
mm10_v2_chr9_-_103480328_103480348	0.416155	Zic3	ENSMUST00000124310.2|Bfsp2|ENSMUSG00000032556.9|beaded filament structural protein 2, phakinin
mm10_v2_chr9_-_32344237_32344255	0.413734	Zic3	ENSMUST00000034533.5|Kcnj5|ENSMUSG00000032034.5|potassium inwardly-rectifying channel, subfamily J, member 5
mm10_v2_chr3_-_108415552_108415552	0.399692	Zic3	ENSMUST00000090558.3|Celsr2|ENSMUSG00000068740.7|cadherin, EGF LAG seven-pass G-type receptor 2 (flamingo homolog, Drosophila)
mm10_v2_chr11_+_79339792_79339913	0.398479	Zic3	ENSMUST00000108251.2|Nf1|ENSMUSG00000020716.9|neurofibromatosis 1 	ENSMUST00000071325.2|Nf1|ENSMUSG00000020716.9|neurofibromatosis 1
mm10_v2_chr2_-_92370999_92371036	0.396047	Zic3	ENSMUST00000176810.1|Gyltl1b|ENSMUSG00000040434.10|glycosyltransferase-like 1B 	ENSMUST00000090582.4|Gyltl1b|ENSMUSG00000040434.10|glycosyltransferase-like 1B
mm10_v2_chr13_-_81633119_81633154	0.393553	Zic3	ENSMUST00000126444.1|Gpr98|ENSMUSG00000069170.7|G protein-coupled receptor 98 	ENSMUST00000128585.1|Gpr98|ENSMUSG00000069170.7|G protein-coupled receptor 98 	ENSMUST00000146749.1|Gpr98|ENSMUSG00000069170.7|G protein-coupled receptor 98 	ENSMUST00000095585.4|Gpr98|ENSMUSG00000069170.7|G protein-coupled receptor 98
mm10_v2_chr7_-_109439076_109439083	0.390707	Zic3	ENSMUST00000106745.2|Stk33|ENSMUSG00000031027.9|serine/threonine kinase 33 	ENSMUST00000090414.4|Stk33|ENSMUSG00000031027.9|serine/threonine kinase 33
mm10_v2_chr14_-_55560340_55560406	0.38987	Zic3	ENSMUST00000066106.3|A730061H03Rik|ENSMUSG00000053588.3|RIKEN cDNA A730061H03 gene
mm10_v2_chr2_+_31640037_31640037	0.389022	Zic3	ENSMUST00000113470.2|Prdm12|ENSMUSG00000079466.2|PR domain containing 12
mm10_v2_chr12_-_27342696_27342726	0.386743	Zic3	ENSMUST00000079063.5|Sox11|ENSMUSG00000063632.5|SRY-box containing gene 11
mm10_v2_chr16_+_37011758_37011791	0.386303	Zic3	ENSMUST00000071452.5|Polq|ENSMUSG00000034206.9|polymerase (DNA directed), theta 	ENSMUST00000054034.6|Polq|ENSMUSG00000034206.9|polymerase (DNA directed), theta
mm10_v2_chr9_-_108263706_108263819	0.385685	Zic3	ENSMUST00000171412.1|Dag1|ENSMUSG00000039952.9|dystroglycan 1
mm10_v2_chr17_+_84511832_84511913	0.382263	Zic3	ENSMUST00000047206.5|Plekhh2|ENSMUSG00000040852.5|pleckstrin homology domain containing, family H (with MyTH4 domain) member 2
mm10_v2_chr7_-_4778141_4778144	0.379922	Zic3	ENSMUST00000094892.5|Il11|ENSMUSG00000004371.8|interleukin 11
mm10_v2_chr8_+_40423786_40423848	0.377392	Zic3	ENSMUST00000049389.4|Zdhhc2|ENSMUSG00000039470.9|zinc finger, DHHC domain containing 2 	ENSMUST00000128166.1|Zdhhc2|ENSMUSG00000039470.9|zinc finger, DHHC domain containing 2 	ENSMUST00000167766.1|Zdhhc2|ENSMUSG00000039470.9|zinc finger, DHHC domain containing 2
mm10_v2_chr4_+_108165432_108165441	0.376953	Zic3	ENSMUST00000052999.6|Echdc2|ENSMUSG00000028601.12|enoyl Coenzyme A hydratase domain containing 2
mm10_v2_chr6_+_17307040_17307085	0.374626	Zic3	ENSMUST00000123439.1|Cav1|ENSMUSG00000007655.10|caveolin 1, caveolae protein
mm10_v2_chr17_-_32788284_32788297	0.37104	Zic3	ENSMUST00000159086.2|Zfp871|ENSMUSG00000024298.8|zinc finger protein 871
mm10_v2_chr2_-_160872829_160872943	0.369364	Zic3	ENSMUST00000176141.1|Zhx3|ENSMUSG00000035877.11|zinc fingers and homeoboxes 3
mm10_v2_chr6_-_56362356_56362519	0.367449	Zic3	ENSMUST00000044505.7|Pde1c|ENSMUSG00000004347.10|phosphodiesterase 1C 	ENSMUST00000166102.1|Pde1c|ENSMUSG00000004347.10|phosphodiesterase 1C 	ENSMUST00000164037.1|Pde1c|ENSMUSG00000004347.10|phosphodiesterase 1C 	ENSMUST00000114327.2|Pde1c|ENSMUSG00000004347.10|phosphodiesterase 1C
mm10_v2_chr9_-_77544829_77544862	0.366853	Zic3	ENSMUST00000183734.1|Lrrc1|ENSMUSG00000032352.9|leucine rich repeat containing 1
mm10_v2_chr2_+_15055274_15055379	0.365726	Zic3	ENSMUST00000069870.3|Arl5b|ENSMUSG00000017418.7|ADP-ribosylation factor-like 5B
mm10_v2_chr16_-_89960815_89960828	0.362567	Zic3	ENSMUST00000002588.3|Tiam1|ENSMUSG00000002489.9|T cell lymphoma invasion and metastasis 1
mm10_v2_chr17_-_73710415_73710451	0.360171	Zic3	ENSMUST00000112591.2|Galnt14|ENSMUSG00000024064.7|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 14 	ENSMUST00000024858.5|Galnt14|ENSMUSG00000024064.7|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 14
mm10_v2_chr2_-_170427828_170427852	0.359145	Zic3	ENSMUST00000013667.2|Bcas1|ENSMUSG00000013523.7|breast carcinoma amplified sequence 1 	ENSMUST00000109152.2|Bcas1|ENSMUSG00000013523.7|breast carcinoma amplified sequence 1 	ENSMUST00000068137.4|Bcas1|ENSMUSG00000013523.7|breast carcinoma amplified sequence 1
mm10_v2_chr11_+_60537978_60538074	0.358866	Zic3	ENSMUST00000044250.3|Alkbh5|ENSMUSG00000042650.3|alkB, alkylation repair homolog 5 (E. coli)
mm10_v2_chr11_+_97030130_97030173	0.351833	Zic3	ENSMUST00000153482.1|Scrn2|ENSMUSG00000020877.5|secernin 2
mm10_v2_chr2_+_127008711_127008756	0.341634	Zic3	ENSMUST00000110394.1|Ap4e1|ENSMUSG00000001998.9|adaptor-related protein complex AP-4, epsilon 1 	ENSMUST00000002063.8|Ap4e1|ENSMUSG00000001998.9|adaptor-related protein complex AP-4, epsilon 1
mm10_v2_chr19_-_4615453_4615512	0.340683	Zic3	ENSMUST00000053597.2|Lrfn4|ENSMUSG00000045045.7|leucine rich repeat and fibronectin type III domain containing 4
mm10_v2_chrX_+_137049586_137049654	0.339168	Zic3	ENSMUST00000047852.7|Fam199x|ENSMUSG00000042595.7|family with sequence similarity 199, X-linked
mm10_v2_chr9_+_119063429_119063467	0.337384	Zic3	ENSMUST00000141185.1|Vill|ENSMUSG00000038775.8|villin-like 	ENSMUST00000126251.1|Vill|ENSMUSG00000038775.8|villin-like 	ENSMUST00000136561.1|Vill|ENSMUSG00000038775.8|villin-like
mm10_v2_chr14_-_54926784_54926805	0.33624	Zic3	ENSMUST00000022813.6|Efs|ENSMUSG00000022203.6|embryonal Fyn-associated substrate
mm10_v2_chr7_-_105787544_105787555	0.334854	Zic3	ENSMUST00000078482.5|Dchs1|ENSMUSG00000036862.8|dachsous 1 (Drosophila) 	ENSMUST00000154659.1|Dchs1|ENSMUSG00000036862.8|dachsous 1 (Drosophila)
mm10_v2_chr5_-_31291026_31291143	0.334755	Zic3	ENSMUST00000041565.7|Ift172|ENSMUSG00000038564.7|intraflagellar transport 172
mm10_v2_chr5_-_138170992_138171033	0.333255	Zic3	ENSMUST00000139983.1|Mcm7|ENSMUSG00000029730.10|minichromosome maintenance deficient 7 (S. cerevisiae)
mm10_v2_chr10_+_80805233_80805249	0.330279	Zic3	ENSMUST00000036016.4|Amh|ENSMUSG00000035262.4|anti-Mullerian hormone
mm10_v2_chr3_-_46447939_46447980	0.327331	Zic3	ENSMUST00000166505.1|Pabpc4l|ENSMUSG00000090919.1|poly(A) binding protein, cytoplasmic 4-like
mm10_v2_chr9_+_85842852_85842880	0.322358	Zic3	ENSMUST00000098500.3|Tpbg|ENSMUSG00000035274.7|trophoblast glycoprotein
mm10_v2_chr5_+_93093428_93093457	0.322279	Zic3	ENSMUST00000074733.7|Sept11|ENSMUSG00000058013.8|septin 11
mm10_v2_chr12_-_21373606_21373632	0.319852	Zic3	ENSMUST00000064536.6|Adam17|ENSMUSG00000052593.9|a disintegrin and metallopeptidase domain 17
mm10_v2_chr5_+_135725713_135725740	0.319091	Zic3	ENSMUST00000127096.1|Por|ENSMUSG00000005514.8|P450 (cytochrome) oxidoreductase
mm10_v2_chr12_-_21373550_21373593	0.30976	Zic3	ENSMUST00000101551.3|Adam17|ENSMUSG00000052593.9|a disintegrin and metallopeptidase domain 17
mm10_v2_chr2_+_131234043_131234136	0.306281	Zic3	ENSMUST00000041362.5|Mavs|ENSMUSG00000037523.7|mitochondrial antiviral signaling protein 	ENSMUST00000110199.2|Mavs|ENSMUSG00000037523.7|mitochondrial antiviral signaling protein
mm10_v2_chr17_+_28858411_28858499	0.305241	Zic3	ENSMUST00000114737.1|Pnpla1|ENSMUSG00000043286.5|patatin-like phospholipase domain containing 1 	ENSMUST00000056866.5|Pnpla1|ENSMUSG00000043286.5|patatin-like phospholipase domain containing 1
mm10_v2_chr7_-_109438998_109439017	0.303532	Zic3	ENSMUST00000121378.1|Stk33|ENSMUSG00000031027.9|serine/threonine kinase 33
mm10_v2_chr10_+_39732364_39732450	0.300978	Zic3	ENSMUST00000164763.1|Rev3l|ENSMUSG00000019841.9|REV3-like, catalytic subunit of DNA polymerase zeta RAD54 like (S. cerevisiae)
mm10_v2_chr11_-_109473220_109473294	0.300797	Zic3	ENSMUST00000070872.6|Slc16a6|ENSMUSG00000041920.8|solute carrier family 16 (monocarboxylic acid transporters), member 6
mm10_v2_chr4_+_108460000_108460030	0.295759	Zic3	ENSMUST00000097925.2|Zcchc11|ENSMUSG00000034610.8|zinc finger, CCHC domain containing 11
mm10_v2_chr7_+_35802593_35802593	0.295535	Zic3	ENSMUST00000052454.2|E130304I02Rik|ENSMUSG00000044997.2|RIKEN cDNA E130304I02 gene
mm10_v2_chr6_-_39725448_39725478	0.295496	Zic3	ENSMUST00000002487.8|Braf|ENSMUSG00000002413.9|Braf transforming gene
mm10_v2_chr2_+_29890063_29890081	0.295106	Zic3	ENSMUST00000028128.6|Odf2|ENSMUSG00000026790.13|outer dense fiber of sperm tails 2
mm10_v2_chr1_-_152902628_152902669	0.294439	Zic3	ENSMUST00000111836.2|Smg7|ENSMUSG00000042772.9|Smg-7 homolog, nonsense mediated mRNA decay factor (C. elegans) 	ENSMUST00000073441.6|Smg7|ENSMUSG00000042772.9|Smg-7 homolog, nonsense mediated mRNA decay factor (C. elegans)
mm10_v2_chr2_+_29889720_29889753	0.29398	Zic3	ENSMUST00000113767.1|Odf2|ENSMUSG00000026790.13|outer dense fiber of sperm tails 2
mm10_v2_chr6_+_48395652_48395688	0.290525	Zic3	ENSMUST00000077093.4|Krba1|ENSMUSG00000042810.8|KRAB-A domain containing 1
mm10_v2_chr2_-_168590315_168590372	0.289318	Zic3	ENSMUST00000109184.1|Nfatc2|ENSMUSG00000027544.10|nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 2
mm10_v2_chr2_+_172550991_172551043	0.288085	Zic3	ENSMUST00000170744.1|Tfap2c|ENSMUSG00000028640.5|transcription factor AP-2, gamma
mm10_v2_chr13_-_54687644_54687688	0.287676	Zic3	ENSMUST00000129881.1|Rnf44|ENSMUSG00000034928.10|ring finger protein 44
mm10_v2_chr7_-_127393604_127393663	0.286562	Zic3	ENSMUST00000165495.1|E430018J23Rik|ENSMUSG00000078580.3|RIKEN cDNA E430018J23 gene 	ENSMUST00000106303.2|E430018J23Rik|ENSMUSG00000078580.3|RIKEN cDNA E430018J23 gene 	ENSMUST00000074249.6|E430018J23Rik|ENSMUSG00000078580.3|RIKEN cDNA E430018J23 gene
mm10_v2_chr2_-_39190687_39190746	0.286195	Zic3	ENSMUST00000142872.1|Scai|ENSMUSG00000035236.11|suppressor of cancer cell invasion 	ENSMUST00000038874.5|Scai|ENSMUSG00000035236.11|suppressor of cancer cell invasion
mm10_v2_chr17_+_25951472_25951472	0.283427	Zic3	ENSMUST00000181174.1|D630044L22Rik|ENSMUSG00000097405.1|RIKEN cDNA gene D630044L22 gene
mm10_v2_chr7_-_109438786_109438837	0.28147	Zic3	ENSMUST00000121748.1|Stk33|ENSMUSG00000031027.9|serine/threonine kinase 33
mm10_v2_chr1_-_64121389_64121452	0.280704	Zic3	ENSMUST00000055001.3|Klf7|ENSMUSG00000025959.7|Kruppel-like factor 7 (ubiquitous)
mm10_v2_chr2_+_156840966_156841017	0.280533	Zic3	ENSMUST00000109564.1|Tgif2|ENSMUSG00000062175.7|TGFB-induced factor homeobox 2
mm10_v2_chr5_-_52566264_52566312	0.279038	Zic3	ENSMUST00000039750.5|Lgi2|ENSMUSG00000039252.7|leucine-rich repeat LGI family, member 2
mm10_v2_chr2_+_27079371_27079385	0.277959	Zic3	ENSMUST00000091233.6|Adamtsl2|ENSMUSG00000036040.8|ADAMTS-like 2
mm10_v2_chr2_+_119742306_119742337	0.276562	Zic3	ENSMUST00000028758.7|Itpka|ENSMUSG00000027296.7|inositol 1,4,5-trisphosphate 3-kinase A
mm10_v2_chr17_+_25786566_25786584	0.274824	Zic3	ENSMUST00000095500.4|Ccdc78|ENSMUSG00000071202.4|coiled-coil domain containing 78
mm10_v2_chr1_+_131827977_131828019	0.274816	Zic3	ENSMUST00000086559.6|Slc41a1|ENSMUSG00000013275.9|solute carrier family 41, member 1
mm10_v2_chr9_-_82975475_82975493	0.274344	Zic3	ENSMUST00000034787.5|Phip|ENSMUSG00000032253.7|pleckstrin homology domain interacting protein
mm10_v2_chrX_-_167382747_167382760	0.274247	Zic3	ENSMUST00000026839.4|Prps2|ENSMUSG00000025742.5|phosphoribosyl pyrophosphate synthetase 2
mm10_v2_chr9_-_77544870_77544914	0.274093	Zic3	ENSMUST00000183873.1|Lrrc1|ENSMUSG00000032352.9|leucine rich repeat containing 1
mm10_v2_chr7_+_51879041_51879064	0.272299	Zic3	ENSMUST00000107591.2|Gas2|ENSMUSG00000030498.8|growth arrest specific 2
mm10_v2_chr11_-_109472611_109472688	0.272021	Zic3	ENSMUST00000168740.1|Slc16a6|ENSMUSG00000041920.8|solute carrier family 16 (monocarboxylic acid transporters), member 6
mm10_v2_chr9_+_108648720_108648840	0.271856	Zic3	ENSMUST00000098384.2|Gm10621|ENSMUSG00000074075.2|predicted gene 10621
mm10_v2_chr10_-_49788743_49788769	0.269265	Zic3	ENSMUST00000105483.1|Grik2|ENSMUSG00000056073.8|glutamate receptor, ionotropic, kainate 2 (beta 2) 	ENSMUST00000105487.1|Grik2|ENSMUSG00000056073.8|glutamate receptor, ionotropic, kainate 2 (beta 2)
mm10_v2_chr2_-_92371039_92371062	0.268021	Zic3	ENSMUST00000068586.6|Gyltl1b|ENSMUSG00000040434.10|glycosyltransferase-like 1B
mm10_v2_chr10_+_81137953_81137992	0.267716	Zic3	ENSMUST00000117956.1|Zbtb7a|ENSMUSG00000035011.9|zinc finger and BTB domain containing 7a
mm10_v2_chr8_-_126475062_126475097	0.265412	Zic3	ENSMUST00000170518.1|Gm17296|ENSMUSG00000090290.1|predicted gene, 17296
mm10_v2_chr17_+_34593388_34593417	0.26236	Zic3	ENSMUST00000174532.1|Pbx2|ENSMUSG00000034673.8|pre B cell leukemia homeobox 2
mm10_v2_chr4_+_52439235_52439287	0.259982	Zic3	ENSMUST00000117280.1|Smc2|ENSMUSG00000028312.13|structural maintenance of chromosomes 2 	ENSMUST00000102915.3|Smc2|ENSMUSG00000028312.13|structural maintenance of chromosomes 2 	ENSMUST00000142227.1|Smc2|ENSMUSG00000028312.13|structural maintenance of chromosomes 2
mm10_v2_chr8_-_87959560_87959595	0.259378	Zic3	ENSMUST00000109655.2|Zfp423|ENSMUSG00000045333.9|zinc finger protein 423
mm10_v2_chr9_+_86695542_86695542	0.257824	Zic3	ENSMUST00000150367.2|A330041J22Rik|ENSMUSG00000087466.2|RIKEN cDNA A330041J22 gene
mm10_v2_chr11_+_96789118_96789146	0.25451	Zic3	ENSMUST00000018810.3|Cbx1|ENSMUSG00000018666.7|chromobox 1
mm10_v2_chr2_-_104816696_104816792	0.253472	Zic3	ENSMUST00000117237.1|Qser1|ENSMUSG00000074994.4|glutamine and serine rich 1
mm10_v2_chr5_+_105732063_105732111	0.249996	Zic3	ENSMUST00000154807.1|Lrrc8d|ENSMUSG00000046079.10|leucine rich repeat containing 8D
mm10_v2_chr13_-_24937585_24937691	0.249206	Zic3	ENSMUST00000037615.6|Aldh5a1|ENSMUSG00000035936.6|aldhehyde dehydrogenase family 5, subfamily A1
mm10_v2_chr15_-_78544345_78544345	0.247274	Zic3	ENSMUST00000053239.2|Sstr3|ENSMUSG00000044933.2|somatostatin receptor 3
mm10_v2_chr7_-_126799163_126799254	0.246719	Zic3	ENSMUST00000032934.5|Aldoa|ENSMUSG00000030695.7|aldolase A, fructose-bisphosphate
mm10_v2_chrX_+_106187100_106187179	0.24634	Zic3	ENSMUST00000081593.6|Pgk1|ENSMUSG00000062070.6|phosphoglycerate kinase 1
mm10_v2_chr14_-_31640878_31640980	0.245639	Zic3	ENSMUST00000167066.1|Hacl1|ENSMUSG00000021884.11|2-hydroxyacyl-CoA lyase 1 	ENSMUST00000127204.2|Hacl1|ENSMUSG00000021884.11|2-hydroxyacyl-CoA lyase 1 	ENSMUST00000022437.8|Hacl1|ENSMUSG00000021884.11|2-hydroxyacyl-CoA lyase 1
mm10_v2_chr19_+_38481057_38481121	0.243754	Zic3	ENSMUST00000182481.1|Plce1|ENSMUSG00000024998.11|phospholipase C, epsilon 1
mm10_v2_chr17_+_4994904_4995074	0.238439	Zic3	ENSMUST00000092723.4|Arid1b|ENSMUSG00000069729.7|AT rich interactive domain 1B (SWI-like) 	ENSMUST00000115797.2|Arid1b|ENSMUSG00000069729.7|AT rich interactive domain 1B (SWI-like)
mm10_v2_chr7_+_51878967_51879000	0.234151	Zic3	ENSMUST00000051912.6|Gas2|ENSMUSG00000030498.8|growth arrest specific 2
mm10_v2_chr12_+_112760652_112760659	0.232901	Zic3	ENSMUST00000063888.3|Pld4|ENSMUSG00000052160.6|phospholipase D family, member 4
mm10_v2_chr15_-_78803015_78803050	0.231203	Zic3	ENSMUST00000164826.1|Card10|ENSMUSG00000033170.8|caspase recruitment domain family, member 10
mm10_v2_chr2_-_156111863_156111943	0.230351	Zic3	ENSMUST00000154889.1|Cpne1|ENSMUSG00000074643.6|copine I 	ENSMUST00000079312.3|Cpne1|ENSMUSG00000074643.6|copine I 	ENSMUST00000153634.1|Cpne1|ENSMUSG00000074643.6|copine I 	ENSMUST00000133921.1|Cpne1|ENSMUSG00000074643.6|copine I 	ENSMUST00000131377.1|Rbm12|ENSMUSG00000089824.4|RNA binding motif protein 12 	ENSMUST00000183518.1|RP23-220D12.12|ENSMUSG00000098950.1|RNA-binding protein 12  	ENSMUST00000184265.1|Cpne1|ENSMUSG00000074643.6|copine I 	ENSMUST00000109607.3|Cpne1|ENSMUSG00000074643.6|copine I 	ENSMUST00000109608.2|Cpne1|ENSMUSG00000074643.6|copine I
mm10_v2_chr1_+_92831614_92831645	0.230116	Zic3	ENSMUST00000045970.6|Gpc1|ENSMUSG00000034220.6|glypican 1
mm10_v2_chr16_-_91011029_91011069	0.230035	Zic3	ENSMUST00000130813.1|Synj1|ENSMUSG00000022973.11|synaptojanin 1
mm10_v2_chr3_+_87930256_87930350	0.229878	Zic3	ENSMUST00000055984.6|Isg20l2|ENSMUSG00000048039.8|interferon stimulated exonuclease gene 20-like 2
mm10_v2_chr11_+_96789213_96789249	0.22964	Zic3	ENSMUST00000079702.3|Cbx1|ENSMUSG00000018666.7|chromobox 1
mm10_v2_chr9_-_44251464_44251491	0.227196	Zic3	ENSMUST00000034618.4|Pdzd3|ENSMUSG00000032105.4|PDZ domain containing 3
mm10_v2_chr11_-_98149551_98149621	0.227084	Zic3	ENSMUST00000103143.3|Fbxl20|ENSMUSG00000020883.12|F-box and leucine-rich repeat protein 20
mm10_v2_chr5_-_98030727_98030765	0.226072	Zic3	ENSMUST00000031281.9|Antxr2|ENSMUSG00000029338.9|anthrax toxin receptor 2
mm10_v2_chr13_-_54687696_54687809	0.225034	Zic3	ENSMUST00000177950.1|Rnf44|ENSMUSG00000034928.10|ring finger protein 44 	ENSMUST00000146931.1|Rnf44|ENSMUSG00000034928.10|ring finger protein 44
mm10_v2_chr11_+_50237002_50237014	0.224316	Zic3	ENSMUST00000180443.1|Gm26542|ENSMUSG00000097887.1|predicted gene, 26542
mm10_v2_chr14_-_34374617_34374789	0.224295	Zic3	ENSMUST00000023826.4|Sncg|ENSMUSG00000023064.4|synuclein, gamma
mm10_v2_chr5_+_105731755_105731798	0.223835	Zic3	ENSMUST00000127686.1|Lrrc8d|ENSMUSG00000046079.10|leucine rich repeat containing 8D
mm10_v2_chr2_-_146511899_146511979	0.223643	Zic3	ENSMUST00000131824.1|Ralgapa2|ENSMUSG00000037110.13|Ral GTPase activating protein, alpha subunit 2 (catalytic)
mm10_v2_chr9_-_106789130_106789213	0.223267	Zic3	ENSMUST00000046502.5|Rad54l2|ENSMUSG00000040661.5|RAD54 like 2 (S. cerevisiae)
mm10_v2_chr4_+_137277489_137277518	0.222909	Zic3	ENSMUST00000045747.4|Wnt4|ENSMUSG00000036856.4|wingless-related MMTV integration site 4
mm10_v2_chr13_+_96542727_96542775	0.222899	Zic3	ENSMUST00000077672.4|Col4a3bp|ENSMUSG00000021669.8|collagen, type IV, alpha 3 (Goodpasture antigen) binding protein 	ENSMUST00000109444.2|Col4a3bp|ENSMUSG00000021669.8|collagen, type IV, alpha 3 (Goodpasture antigen) binding protein
mm10_v2_chr4_-_62208426_62208487	0.221524	Zic3	ENSMUST00000068822.3|Zfp37|ENSMUSG00000028389.4|zinc finger protein 37
mm10_v2_chr1_+_129273344_129273470	0.220837	Zic3	ENSMUST00000073527.6|Thsd7b|ENSMUSG00000042581.8|thrombospondin, type I, domain containing 7B 	ENSMUST00000040311.7|Thsd7b|ENSMUSG00000042581.8|thrombospondin, type I, domain containing 7B
mm10_v2_chr7_-_19399859_19399921	0.220084	Zic3	ENSMUST00000047170.3|Klc3|ENSMUSG00000040714.7|kinesin light chain 3 	ENSMUST00000108459.2|Klc3|ENSMUSG00000040714.7|kinesin light chain 3
mm10_v2_chr2_-_92370968_92370992	0.215978	Zic3	ENSMUST00000176774.1|Gyltl1b|ENSMUSG00000040434.10|glycosyltransferase-like 1B
mm10_v2_chr6_-_124813065_124813092	0.215407	Zic3	ENSMUST00000149610.2|Tpi1|ENSMUSG00000023456.8|triosephosphate isomerase 1
mm10_v2_chr7_+_127800844_127800941	0.214233	Zic3	ENSMUST00000106271.1|Hsd3b7|ENSMUSG00000042289.5|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7 	ENSMUST00000138432.1|Hsd3b7|ENSMUSG00000042289.5|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7
mm10_v2_chr17_+_35135463_35135539	0.213383	Zic3	ENSMUST00000173535.1|Bag6|ENSMUSG00000024392.11|BCL2-associated athanogene 6 	ENSMUST00000173952.1|Bag6|ENSMUSG00000024392.11|BCL2-associated athanogene 6
mm10_v2_chr12_+_3572528_3572548	0.213155	Zic3	ENSMUST00000173998.1|Dtnb|ENSMUSG00000071454.7|dystrobrevin, beta
mm10_v2_chr11_-_70687917_70687981	0.212897	Zic3	ENSMUST00000108545.2|Camta2|ENSMUSG00000040712.10|calmodulin binding transcription activator 2 	ENSMUST00000120261.1|Camta2|ENSMUSG00000040712.10|calmodulin binding transcription activator 2 	ENSMUST00000036299.7|Camta2|ENSMUSG00000040712.10|calmodulin binding transcription activator 2 	ENSMUST00000119120.1|Camta2|ENSMUSG00000040712.10|calmodulin binding transcription activator 2 	ENSMUST00000100933.3|Camta2|ENSMUSG00000040712.10|calmodulin binding transcription activator 2
mm10_v2_chr14_-_103843685_103843703	0.208893	Zic3	ENSMUST00000172237.1|Ednrb|ENSMUSG00000022122.8|endothelin receptor type B
mm10_v2_chr5_-_138171248_138171274	0.207882	Zic3	ENSMUST00000153867.1|Mcm7|ENSMUSG00000029730.10|minichromosome maintenance deficient 7 (S. cerevisiae)
mm10_v2_chr1_+_187609028_187609047	0.207017	Zic3	ENSMUST00000110939.1|Esrrg|ENSMUSG00000026610.7|estrogen-related receptor gamma
mm10_v2_chr11_+_96789149_96789206	0.205525	Zic3	ENSMUST00000093943.3|Cbx1|ENSMUSG00000018666.7|chromobox 1
mm10_v2_chr19_+_46397009_46397033	0.203954	Zic3	ENSMUST00000118440.1|Sufu|ENSMUSG00000025231.10|suppressor of fused homolog (Drosophila)
mm10_v2_chr3_-_100489324_100489354	0.20343	Zic3	ENSMUST00000061455.8|Fam46c|ENSMUSG00000044468.8|family with sequence similarity 46, member C
mm10_v2_chr3_+_86224665_86224717	0.202529	Zic3	ENSMUST00000107635.1|Lrba|ENSMUSG00000028080.10|LPS-responsive beige-like anchor
mm10_v2_chr5_-_138171216_138171246	0.202524	Zic3	ENSMUST00000147920.1|Mcm7|ENSMUSG00000029730.10|minichromosome maintenance deficient 7 (S. cerevisiae)
mm10_v2_chr1_+_59764264_59764286	0.201352	Zic3	ENSMUST00000087435.5|Bmpr2|ENSMUSG00000067336.5|bone morphogenetic protein receptor, type II (serine/threonine kinase)
mm10_v2_chr7_+_90442729_90442865	0.200677	Zic3	ENSMUST00000061767.4|Crebzf|ENSMUSG00000051451.5|CREB/ATF bZIP transcription factor 	ENSMUST00000107206.1|Crebzf|ENSMUSG00000051451.5|CREB/ATF bZIP transcription factor
mm10_v2_chr2_+_85037212_85037302	0.199861	Zic3	ENSMUST00000077798.6|Ssrp1|ENSMUSG00000027067.10|structure specific recognition protein 1
mm10_v2_chr16_+_32673144_32673199	0.198146	Zic3	ENSMUST00000115122.2|Tnk2|ENSMUSG00000022791.10|tyrosine kinase, non-receptor, 2 	ENSMUST00000115120.1|Tnk2|ENSMUSG00000022791.10|tyrosine kinase, non-receptor, 2 	ENSMUST00000131238.1|Tnk2|ENSMUSG00000022791.10|tyrosine kinase, non-receptor, 2 	ENSMUST00000115121.2|Tnk2|ENSMUSG00000022791.10|tyrosine kinase, non-receptor, 2 	ENSMUST00000152361.1|Tnk2|ENSMUSG00000022791.10|tyrosine kinase, non-receptor, 2
mm10_v2_chr16_+_32914094_32914142	0.19783	Zic3	ENSMUST00000023491.6|Lrch3|ENSMUSG00000022801.7|leucine-rich repeats and calponin homology (CH) domain containing 3 	ENSMUST00000170899.1|Lrch3|ENSMUSG00000022801.7|leucine-rich repeats and calponin homology (CH) domain containing 3 	ENSMUST00000171118.1|Lrch3|ENSMUSG00000022801.7|leucine-rich repeats and calponin homology (CH) domain containing 3 	ENSMUST00000170201.1|Lrch3|ENSMUSG00000022801.7|leucine-rich repeats and calponin homology (CH) domain containing 3 	ENSMUST00000165616.1|Lrch3|ENSMUSG00000022801.7|leucine-rich repeats and calponin homology (CH) domain containing 3 	ENSMUST00000135193.2|Lrch3|ENSMUSG00000022801.7|leucine-rich repeats and calponin homology (CH) domain containing 3
mm10_v2_chr9_+_110117703_110117703	0.197321	Zic3	ENSMUST00000098355.3|Gm10615|ENSMUSG00000074056.3|predicted gene 10615
mm10_v2_chr16_-_30388530_30388530	0.196883	Zic3	ENSMUST00000100013.2|Atp13a3|ENSMUSG00000022533.7|ATPase type 13A3 	ENSMUST00000061350.6|Atp13a3|ENSMUSG00000022533.7|ATPase type 13A3
mm10_v2_chr19_-_5688149_5688149	0.196439	Zic3	ENSMUST00000068169.5|Pcnxl3|ENSMUSG00000054874.6|pecanex-like 3 (Drosophila)
mm10_v2_chr11_+_72042455_72042481	0.193314	Zic3	ENSMUST00000021164.3|Fam64a|ENSMUSG00000020808.3|family with sequence similarity 64, member A
mm10_v2_chr5_-_110779937_110779967	0.190873	Zic3	ENSMUST00000112426.1|Pus1|ENSMUSG00000029507.10|pseudouridine synthase 1
mm10_v2_chr10_-_63023847_63023871	0.190203	Zic3	ENSMUST00000119814.2|Hnrnph3|ENSMUSG00000020069.10|heterogeneous nuclear ribonucleoprotein H3
mm10_v2_chr6_+_48395586_48395646	0.188714	Zic3	ENSMUST00000114571.1|Krba1|ENSMUSG00000042810.8|KRAB-A domain containing 1 	ENSMUST00000114572.3|Krba1|ENSMUSG00000042810.8|KRAB-A domain containing 1 	ENSMUST00000031815.5|Krba1|ENSMUSG00000042810.8|KRAB-A domain containing 1
mm10_v2_chr1_+_191906743_191906767	0.187262	Zic3	ENSMUST00000044954.6|Slc30a1|ENSMUSG00000037434.7|solute carrier family 30 (zinc transporter), member 1
mm10_v2_chr7_+_24370255_24370312	0.185341	Zic3	ENSMUST00000171904.1|Kcnn4|ENSMUSG00000054342.7|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4
mm10_v2_chr2_-_20968526_20968625	0.185041	Zic3	ENSMUST00000141298.2|Arhgap21|ENSMUSG00000036591.9|Rho GTPase activating protein 21 	ENSMUST00000125783.2|Arhgap21|ENSMUSG00000036591.9|Rho GTPase activating protein 21
mm10_v2_chrX_+_7790012_7790029	0.184271	Zic3	ENSMUST00000140540.1|Gripap1|ENSMUSG00000031153.10|GRIP1 associated protein 1
mm10_v2_chr13_+_6548154_6548174	0.182297	Zic3	ENSMUST00000021611.8|Pitrm1|ENSMUSG00000021193.9|pitrilysin metallepetidase 1
mm10_v2_chr2_+_156840077_156840141	0.18188	Zic3	ENSMUST00000081335.6|Tgif2|ENSMUSG00000062175.7|TGFB-induced factor homeobox 2 	ENSMUST00000073352.3|Tgif2|ENSMUSG00000062175.7|TGFB-induced factor homeobox 2
mm10_v2_chrX_+_140956892_140956923	0.181492	Zic3	ENSMUST00000112971.1|Atg4a|ENSMUSG00000079418.3|autophagy related 4A, cysteine peptidase
mm10_v2_chr10_-_115587739_115587780	0.181198	Zic3	ENSMUST00000020350.8|Lgr5|ENSMUSG00000020140.9|leucine rich repeat containing G protein coupled receptor 5
mm10_v2_chr2_-_119477613_119477705	0.181024	Zic3	ENSMUST00000110808.1|Ino80|ENSMUSG00000034154.9|INO80 homolog (S. cerevisiae) 	ENSMUST00000049920.7|Ino80|ENSMUSG00000034154.9|INO80 homolog (S. cerevisiae)
mm10_v2_chr2_-_160872552_160872622	0.180469	Zic3	ENSMUST00000103111.2|Zhx3|ENSMUSG00000035877.11|zinc fingers and homeoboxes 3
mm10_v2_chrX_+_52791179_52791201	0.180174	Zic3	ENSMUST00000101588.1|Ccdc160|ENSMUSG00000073207.1|coiled-coil domain containing 160
mm10_v2_chr13_-_47105790_47105875	0.17889	Zic3	ENSMUST00000129352.1|Dek|ENSMUSG00000021377.8|DEK oncogene (DNA binding)
mm10_v2_chr11_+_116280939_116280939	0.177738	Zic3	ENSMUST00000055872.2|Galr2|ENSMUSG00000020793.5|galanin receptor 2
mm10_v2_chrX_-_133688978_133689005	0.174992	Zic3	ENSMUST00000149154.1|Pcdh19|ENSMUSG00000051323.10|protocadherin 19 	ENSMUST00000167944.1|Pcdh19|ENSMUSG00000051323.10|protocadherin 19
mm10_v2_chr5_-_99978914_99978966	0.172978	Zic3	ENSMUST00000112939.3|Hnrnpd|ENSMUSG00000000568.9|heterogeneous nuclear ribonucleoprotein D 	ENSMUST00000171786.1|Hnrnpd|ENSMUSG00000000568.9|heterogeneous nuclear ribonucleoprotein D 	ENSMUST00000072750.6|Hnrnpd|ENSMUSG00000000568.9|heterogeneous nuclear ribonucleoprotein D 	ENSMUST00000019128.8|Hnrnpd|ENSMUSG00000000568.9|heterogeneous nuclear ribonucleoprotein D 	ENSMUST00000172361.1|Hnrnpd|ENSMUSG00000000568.9|heterogeneous nuclear ribonucleoprotein D
mm10_v2_chr2_+_129100995_129101066	0.172636	Zic3	ENSMUST00000103205.4|Polr1b|ENSMUSG00000027395.9|polymerase (RNA) I polypeptide B 	ENSMUST00000028874.7|Polr1b|ENSMUSG00000027395.9|polymerase (RNA) I polypeptide B
mm10_v2_chr2_-_180776900_180776900	0.171244	Zic3	ENSMUST00000108878.1|Bhlhe23|ENSMUSG00000045493.3|basic helix-loop-helix family, member e23
mm10_v2_chr8_-_47289394_47289411	0.170279	Zic3	ENSMUST00000079195.5|Stox2|ENSMUSG00000038143.8|storkhead box 2
mm10_v2_chr11_+_60777525_60777563	0.168091	Zic3	ENSMUST00000056907.6|Smcr8|ENSMUSG00000049323.7|Smith-Magenis syndrome chromosome region, candidate 8 homolog (human) 	ENSMUST00000102667.3|Smcr8|ENSMUSG00000049323.7|Smith-Magenis syndrome chromosome region, candidate 8 homolog (human)
mm10_v2_chr16_-_85550417_85550432	0.167981	Zic3	ENSMUST00000175700.1|Cyyr1|ENSMUSG00000041134.9|cysteine and tyrosine-rich protein 1 	ENSMUST00000114174.2|Cyyr1|ENSMUSG00000041134.9|cysteine and tyrosine-rich protein 1
mm10_v2_chr2_+_71529085_71529110	0.167469	Zic3	ENSMUST00000152711.1|Dlx1|ENSMUSG00000041911.3|distal-less homeobox 1
mm10_v2_chr14_+_54632329_54632329	0.165698	Zic3	ENSMUST00000173083.1|Gm20726|ENSMUSG00000092443.1|predicted gene, 20726
mm10_v2_chr13_-_9764943_9764994	0.165287	Zic3	ENSMUST00000110634.1|Zmynd11|ENSMUSG00000021156.10|zinc finger, MYND domain containing 11
mm10_v2_chr2_+_169633517_169633676	0.164359	Zic3	ENSMUST00000109157.1|Tshz2|ENSMUSG00000047907.10|teashirt zinc finger family member 2
mm10_v2_chr17_-_84790517_84790585	0.163931	Zic3	ENSMUST00000112308.2|Lrpprc|ENSMUSG00000024120.6|leucine-rich PPR-motif containing
mm10_v2_chrX_+_10717451_10717491	0.161439	Zic3	ENSMUST00000156321.1|Mid1ip1|ENSMUSG00000008035.6|Mid1 interacting protein 1 (gastrulation specific G12-like (zebrafish))
mm10_v2_chr11_+_97029925_97029997	0.161382	Zic3	ENSMUST00000021249.4|Scrn2|ENSMUSG00000020877.5|secernin 2
mm10_v2_chr11_-_42182163_42182222	0.160293	Zic3	ENSMUST00000153147.1|Gabra1|ENSMUSG00000010803.6|gamma-aminobutyric acid (GABA) A receptor, subunit alpha 1
mm10_v2_chrX_+_10717390_10717450	0.15923	Zic3	ENSMUST00000115524.1|Mid1ip1|ENSMUSG00000008035.6|Mid1 interacting protein 1 (gastrulation specific G12-like (zebrafish)) 	ENSMUST00000008179.6|Mid1ip1|ENSMUSG00000008035.6|Mid1 interacting protein 1 (gastrulation specific G12-like (zebrafish))
mm10_v2_chr10_-_81349085_81349240	0.159068	Zic3	ENSMUST00000141171.1|Hmg20b|ENSMUSG00000020232.11|high mobility group 20B
mm10_v2_chr14_+_31001414_31001464	0.1588	Zic3	ENSMUST00000022476.7|Glt8d1|ENSMUSG00000021916.9|glycosyltransferase 8 domain containing 1
mm10_v2_chr11_-_120990871_120991037	0.158649	Zic3	ENSMUST00000154483.1|Csnk1d|ENSMUSG00000025162.11|casein kinase 1, delta
mm10_v2_chr8_-_105637403_105637497	0.153689	Zic3	ENSMUST00000182046.1|Gm5914|ENSMUSG00000098120.1|predicted gene 5914
mm10_v2_chr5_+_115506668_115506808	0.153611	Zic3	ENSMUST00000067268.8|Pxn|ENSMUSG00000029528.11|paxillin 	ENSMUST00000086523.3|Pxn|ENSMUSG00000029528.11|paxillin
mm10_v2_chr11_-_120630126_120630160	0.152724	Zic3	ENSMUST00000106180.1|Mafg|ENSMUSG00000051510.7|v-maf musculoaponeurotic fibrosarcoma oncogene family, protein G (avian)
mm10_v2_chr17_-_6961156_6961156	0.152083	Zic3	ENSMUST00000063683.6|Tagap1|ENSMUSG00000052031.7|T cell activation GTPase activating protein 1
mm10_v2_chr19_+_5366764_5366851	0.151917	Zic3	ENSMUST00000025759.7|Eif1ad|ENSMUSG00000024841.7|eukaryotic translation initiation factor 1A domain containing
mm10_v2_chr6_+_86404336_86404473	0.151472	Zic3	ENSMUST00000113713.2|Tia1|ENSMUSG00000071337.5|cytotoxic granule-associated RNA binding protein 1 	ENSMUST00000113708.1|Tia1|ENSMUSG00000071337.5|cytotoxic granule-associated RNA binding protein 1
mm10_v2_chr18_-_80151467_80151517	0.150845	Zic3	ENSMUST00000066743.9|Adnp2|ENSMUSG00000053950.9|ADNP homeobox 2
mm10_v2_chr11_+_78094682_78094708	0.149641	Zic3	ENSMUST00000100782.3|Fam222b|ENSMUSG00000037750.10|family with sequence similarity 222, member B
mm10_v2_chr8_-_25101985_25102194	0.148714	Zic3	ENSMUST00000128715.1|Plekha2|ENSMUSG00000031557.9|pleckstrin homology domain-containing, family A (phosphoinositide binding specific) member 2 	ENSMUST00000064883.6|Plekha2|ENSMUSG00000031557.9|pleckstrin homology domain-containing, family A (phosphoinositide binding specific) member 2
mm10_v2_chr1_-_38129618_38129679	0.14853	Zic3	ENSMUST00000027251.6|Rev1|ENSMUSG00000026082.6|REV1 homolog (S. cerevisiae)
mm10_v2_chr16_-_4077778_4077831	0.147886	Zic3	ENSMUST00000006137.8|Trap1|ENSMUSG00000005981.11|TNF receptor-associated protein 1
mm10_v2_chr2_+_32288317_32288355	0.146929	Zic3	ENSMUST00000131712.1|Golga2|ENSMUSG00000002546.10|golgi autoantigen, golgin subfamily a, 2 	ENSMUST00000133113.1|Golga2|ENSMUSG00000002546.10|golgi autoantigen, golgin subfamily a, 2 	ENSMUST00000081670.6|Golga2|ENSMUSG00000002546.10|golgi autoantigen, golgin subfamily a, 2 	ENSMUST00000147707.1|Golga2|ENSMUSG00000002546.10|golgi autoantigen, golgin subfamily a, 2 	ENSMUST00000129193.1|Golga2|ENSMUSG00000002546.10|golgi autoantigen, golgin subfamily a, 2
mm10_v2_chr6_-_101377342_101377388	0.146722	Zic3	ENSMUST00000151175.1|Pdzrn3|ENSMUSG00000035357.10|PDZ domain containing RING finger 3
mm10_v2_chr11_-_50325599_50325673	0.145087	Zic3	ENSMUST00000179865.1|Canx|ENSMUSG00000020368.9|calnexin 	ENSMUST00000020637.8|Canx|ENSMUSG00000020368.9|calnexin
mm10_v2_chr7_-_126800036_126800054	0.142281	Zic3	ENSMUST00000133514.1|Aldoa|ENSMUSG00000030695.7|aldolase A, fructose-bisphosphate 	ENSMUST00000151137.1|Aldoa|ENSMUSG00000030695.7|aldolase A, fructose-bisphosphate
mm10_v2_chr17_+_34197715_34197790	0.14216	Zic3	ENSMUST00000173441.1|Psmb8|ENSMUSG00000024338.8|proteasome (prosome, macropain) subunit, beta type 8 (large multifunctional peptidase 7) 	ENSMUST00000025196.8|Psmb8|ENSMUSG00000024338.8|proteasome (prosome, macropain) subunit, beta type 8 (large multifunctional peptidase 7)
mm10_v2_chr5_-_123721007_123721062	0.141185	Zic3	ENSMUST00000031376.7|Zcchc8|ENSMUSG00000029427.7|zinc finger, CCHC domain containing 8
mm10_v2_chr9_-_59750616_59750649	0.140458	Zic3	ENSMUST00000163586.1|Senp8|ENSMUSG00000051705.6|SUMO/sentrin specific peptidase 8 	ENSMUST00000177963.1|Senp8|ENSMUSG00000051705.6|SUMO/sentrin specific peptidase 8 	ENSMUST00000051039.4|Senp8|ENSMUSG00000051705.6|SUMO/sentrin specific peptidase 8
mm10_v2_chr4_-_53159885_53159900	0.140317	Zic3	ENSMUST00000030010.3|Abca1|ENSMUSG00000015243.4|ATP-binding cassette, sub-family A (ABC1), member 1
mm10_v2_chr4_-_136835843_136835988	0.140289	Zic3	ENSMUST00000105846.2|Ephb2|ENSMUSG00000028664.8|Eph receptor B2 	ENSMUST00000059287.7|Ephb2|ENSMUSG00000028664.8|Eph receptor B2 	ENSMUST00000105845.2|Ephb2|ENSMUSG00000028664.8|Eph receptor B2
mm10_v2_chr11_+_53519871_53519917	0.140082	Zic3	ENSMUST00000120878.2|Sept8|ENSMUSG00000018398.12|septin 8
mm10_v2_chr11_+_102604370_102604435	0.139703	Zic3	ENSMUST00000057893.5|Fzd2|ENSMUSG00000050288.5|frizzled homolog 2 (Drosophila)
mm10_v2_chr2_-_156111954_156111978	0.139003	Zic3	ENSMUST00000059647.5|Rbm12|ENSMUSG00000089824.4|RNA binding motif protein 12 	ENSMUST00000109604.2|Rbm12|ENSMUSG00000089824.4|RNA binding motif protein 12 	ENSMUST00000142960.2|Cpne1|ENSMUSG00000074643.6|copine I 	ENSMUST00000138068.1|Rbm12|ENSMUSG00000089824.4|RNA binding motif protein 12 	ENSMUST00000136296.2|Cpne1|ENSMUSG00000074643.6|copine I 	ENSMUST00000128499.1|Rbm12|ENSMUSG00000089824.4|RNA binding motif protein 12
mm10_v2_chr13_+_74350299_74350309	0.1377	Zic3	ENSMUST00000022063.7|Ccdc127|ENSMUSG00000021578.10|coiled-coil domain containing 127
mm10_v2_chr9_-_123678782_123678850	0.137069	Zic3	ENSMUST00000170591.1|Slc6a20a|ENSMUSG00000036814.6|solute carrier family 6 (neurotransmitter transporter), member 20A 	ENSMUST00000171647.1|Slc6a20a|ENSMUSG00000036814.6|solute carrier family 6 (neurotransmitter transporter), member 20A
mm10_v2_chr9_+_46012822_46013000	0.135499	Zic3	ENSMUST00000120463.2|Sik3|ENSMUSG00000034135.8|SIK family kinase 3 	ENSMUST00000120247.1|Sik3|ENSMUSG00000034135.8|SIK family kinase 3
mm10_v2_chr4_-_133753611_133753666	0.134999	Zic3	ENSMUST00000145664.2|Arid1a|ENSMUSG00000007880.10|AT rich interactive domain 1A (SWI-like) 	ENSMUST00000105897.3|Arid1a|ENSMUSG00000007880.10|AT rich interactive domain 1A (SWI-like)
mm10_v2_chr4_+_141010644_141010696	0.134576	Zic3	ENSMUST00000071977.8|Mfap2|ENSMUSG00000060572.11|microfibrillar-associated protein 2
mm10_v2_chr6_-_51469836_51469854	0.133551	Zic3	ENSMUST00000090002.7|Hnrnpa2b1|ENSMUSG00000004980.10|heterogeneous nuclear ribonucleoprotein A2/B1
mm10_v2_chr3_-_53463234_53463306	0.133509	Zic3	ENSMUST00000056749.7|Nhlrc3|ENSMUSG00000042997.7|NHL repeat containing 3
mm10_v2_chr6_-_146577825_146577839	0.133207	Zic3	ENSMUST00000032427.8|Asun|ENSMUSG00000040250.8|asunder, spermatogenesis regulator
mm10_v2_chr3_+_90266507_90266566	0.132921	Zic3	ENSMUST00000098914.3|Dennd4b|ENSMUSG00000042404.10|DENN/MADD domain containing 4B
mm10_v2_chr15_-_50890396_50890463	0.131887	Zic3	ENSMUST00000185183.1|Trps1|ENSMUSG00000038679.10|trichorhinophalangeal syndrome I (human)
mm10_v2_chr19_+_3767953_3768033	0.131571	Zic3	ENSMUST00000113970.1|Suv420h1|ENSMUSG00000045098.12|suppressor of variegation 4-20 homolog 1 (Drosophila)
mm10_v2_chr6_+_86404257_86404319	0.131562	Zic3	ENSMUST00000095752.2|Tia1|ENSMUSG00000071337.5|cytotoxic granule-associated RNA binding protein 1 	ENSMUST00000130967.1|Tia1|ENSMUSG00000071337.5|cytotoxic granule-associated RNA binding protein 1
mm10_v2_chr17_-_71310952_71310969	0.130917	Zic3	ENSMUST00000024849.9|Emilin2|ENSMUSG00000024053.10|elastin microfibril interfacer 2
mm10_v2_chr3_+_132684106_132684145	0.130656	Zic3	ENSMUST00000169172.1|Tbck|ENSMUSG00000028030.6|TBC1 domain containing kinase 	ENSMUST00000029664.6|Tbck|ENSMUSG00000028030.6|TBC1 domain containing kinase
mm10_v2_chr6_+_7844806_7844859	0.129988	Zic3	ENSMUST00000040159.4|C1galt1|ENSMUSG00000042460.4|core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1
mm10_v2_chr16_-_91044473_91044543	0.129456	Zic3	ENSMUST00000118522.1|Paxbp1|ENSMUSG00000022974.6|PAX3 and PAX7 binding protein 1
mm10_v2_chr7_-_126799134_126799155	0.129135	Zic3	ENSMUST00000087566.4|Aldoa|ENSMUSG00000030695.7|aldolase A, fructose-bisphosphate
mm10_v2_chr9_-_44721383_44721484	0.12834	Zic3	ENSMUST00000148929.1|Phldb1|ENSMUSG00000048537.9|pleckstrin homology-like domain, family B, member 1 	ENSMUST00000123406.1|Phldb1|ENSMUSG00000048537.9|pleckstrin homology-like domain, family B, member 1
mm10_v2_chr3_+_66981352_66981407	0.128065	Zic3	ENSMUST00000162036.1|Rsrc1|ENSMUSG00000034544.11|arginine/serine-rich coiled-coil 1
mm10_v2_chr11_-_79146407_79146422	0.126642	Zic3	ENSMUST00000018478.4|Ksr1|ENSMUSG00000018334.10|kinase suppressor of ras 1 	ENSMUST00000108264.1|Ksr1|ENSMUSG00000018334.10|kinase suppressor of ras 1
mm10_v2_chr14_-_48665098_48665246	0.124489	Zic3	ENSMUST00000118578.1|Otx2|ENSMUSG00000021848.9|orthodenticle homolog 2 (Drosophila)
mm10_v2_chr14_+_31001383_31001407	0.12368	Zic3	ENSMUST00000168584.1|Glt8d1|ENSMUSG00000021916.9|glycosyltransferase 8 domain containing 1
mm10_v2_chr4_+_42735545_42735545	0.123185	Zic3	ENSMUST00000068158.3|4930578G10Rik|ENSMUSG00000054885.5|RIKEN cDNA 4930578G10 gene
mm10_v2_chr4_-_41275091_41275144	0.122077	Zic3	ENSMUST00000030143.6|Ubap2|ENSMUSG00000028433.8|ubiquitin-associated protein 2 	ENSMUST00000108068.1|Ubap2|ENSMUSG00000028433.8|ubiquitin-associated protein 2
mm10_v2_chr2_+_53192067_53192100	0.120897	Zic3	ENSMUST00000028336.6|Arl6ip6|ENSMUSG00000026960.6|ADP-ribosylation factor-like 6 interacting protein 6
mm10_v2_chr12_+_83632208_83632325	0.118905	Zic3	ENSMUST00000048155.9|Rbm25|ENSMUSG00000010608.9|RNA binding motif protein 25 	ENSMUST00000182618.1|Rbm25|ENSMUSG00000010608.9|RNA binding motif protein 25 	ENSMUST00000183154.1|Rbm25|ENSMUSG00000010608.9|RNA binding motif protein 25 	ENSMUST00000182036.1|Rbm25|ENSMUSG00000010608.9|RNA binding motif protein 25 	ENSMUST00000182347.1|Rbm25|ENSMUSG00000010608.9|RNA binding motif protein 25
mm10_v2_chrX_+_7789986_7790008	0.117258	Zic3	ENSMUST00000136930.1|Gripap1|ENSMUSG00000031153.10|GRIP1 associated protein 1 	ENSMUST00000115675.2|Gripap1|ENSMUSG00000031153.10|GRIP1 associated protein 1 	ENSMUST00000101694.3|Gripap1|ENSMUSG00000031153.10|GRIP1 associated protein 1
mm10_v2_chr7_-_80403315_80403339	0.116461	Zic3	ENSMUST00000147150.1|Furin|ENSMUSG00000030530.9|furin (paired basic amino acid cleaving enzyme)
mm10_v2_chr4_+_43059028_43059080	0.115433	Zic3	ENSMUST00000163653.1|Unc13b|ENSMUSG00000028456.11|unc-13 homolog B (C. elegans) 	ENSMUST00000107952.2|Unc13b|ENSMUSG00000028456.11|unc-13 homolog B (C. elegans) 	ENSMUST00000107953.2|Unc13b|ENSMUSG00000028456.11|unc-13 homolog B (C. elegans)
mm10_v2_chr15_-_83149270_83149304	0.115393	Zic3	ENSMUST00000129372.1|Poldip3|ENSMUSG00000041815.7|polymerase (DNA-directed), delta interacting protein 3
mm10_v2_chr3_-_66981279_66981318	0.114898	Zic3	ENSMUST00000162098.2|Shox2|ENSMUSG00000027833.10|short stature homeobox 2
mm10_v2_chr9_-_110117379_110117445	0.113752	Zic3	ENSMUST00000111991.2|Dhx30|ENSMUSG00000032480.11|DEAH (Asp-Glu-Ala-His) box polypeptide 30 	ENSMUST00000149199.1|Dhx30|ENSMUSG00000032480.11|DEAH (Asp-Glu-Ala-His) box polypeptide 30 	ENSMUST00000035056.7|Dhx30|ENSMUSG00000032480.11|DEAH (Asp-Glu-Ala-His) box polypeptide 30 	ENSMUST00000148287.1|Dhx30|ENSMUSG00000032480.11|DEAH (Asp-Glu-Ala-His) box polypeptide 30 	ENSMUST00000127744.1|Dhx30|ENSMUSG00000032480.11|DEAH (Asp-Glu-Ala-His) box polypeptide 30
mm10_v2_chr1_-_58586191_58586323	0.112746	Zic3	ENSMUST00000038372.7|Fam126b|ENSMUSG00000038174.8|family with sequence similarity 126, member B 	ENSMUST00000097724.3|Fam126b|ENSMUSG00000038174.8|family with sequence similarity 126, member B 	ENSMUST00000161000.1|Fam126b|ENSMUSG00000038174.8|family with sequence similarity 126, member B 	ENSMUST00000161600.1|Fam126b|ENSMUSG00000038174.8|family with sequence similarity 126, member B
mm10_v2_chr11_+_53519920_53519933	0.112159	Zic3	ENSMUST00000147912.1|Sept8|ENSMUSG00000018398.12|septin 8
mm10_v2_chr10_-_78487842_78487842	0.112116	Zic3	ENSMUST00000069431.4|Gm9978|ENSMUSG00000055704.4|predicted gene 9978
mm10_v2_chr8_-_94098811_94098811	0.111663	Zic3	ENSMUST00000034206.4|Bbs2|ENSMUSG00000031755.5|Bardet-Biedl syndrome 2 (human)
mm10_v2_chrX_+_162760427_162760488	0.111622	Zic3	ENSMUST00000112326.1|Rbbp7|ENSMUSG00000031353.7|retinoblastoma binding protein 7
mm10_v2_chr6_+_87981683_87981717	0.108946	Zic3	ENSMUST00000143871.1|Gm5577|ENSMUSG00000084950.1|predicted gene 5577 	ENSMUST00000153372.1|Gm5577|ENSMUSG00000084950.1|predicted gene 5577
mm10_v2_chr4_-_129640691_129640805	0.108409	Zic3	ENSMUST00000084264.5|Txlna|ENSMUSG00000053841.9|taxilin alpha
mm10_v2_chr5_-_134456227_134456263	0.108283	Zic3	ENSMUST00000111244.1|Gtf2ird1|ENSMUSG00000023079.8|general transcription factor II I repeat domain-containing 1
mm10_v2_chr6_+_86404219_86404240	0.107128	Zic3	ENSMUST00000095754.3|Tia1|ENSMUSG00000071337.5|cytotoxic granule-associated RNA binding protein 1 	ENSMUST00000095753.2|Tia1|ENSMUSG00000071337.5|cytotoxic granule-associated RNA binding protein 1
mm10_v2_chr14_-_56811464_56811464	0.106817	Zic3	ENSMUST00000173954.1|Zmym5|ENSMUSG00000040123.10|zinc finger, MYM-type 5
mm10_v2_chr14_+_54476100_54476252	0.106284	Zic3	ENSMUST00000164766.1|Rem2|ENSMUSG00000022176.5|rad and gem related GTP binding protein 2 	ENSMUST00000164697.1|Rem2|ENSMUSG00000022176.5|rad and gem related GTP binding protein 2
mm10_v2_chrX_+_71364901_71364937	0.106162	Zic3	ENSMUST00000132837.1|Mtmr1|ENSMUSG00000015214.8|myotubularin related protein 1
mm10_v2_chr11_-_102316691_102316708	0.105796	Zic3	ENSMUST00000107115.1|Ubtf|ENSMUSG00000020923.11|upstream binding transcription factor, RNA polymerase I 	ENSMUST00000128016.1|Ubtf|ENSMUSG00000020923.11|upstream binding transcription factor, RNA polymerase I
mm10_v2_chr19_+_7268296_7268313	0.103037	Zic3	ENSMUST00000066646.4|Rcor2|ENSMUSG00000024968.7|REST corepressor 2
mm10_v2_chr13_-_9765137_9765321	0.102232	Zic3	ENSMUST00000062658.8|Zmynd11|ENSMUSG00000021156.10|zinc finger, MYND domain containing 11 	ENSMUST00000130151.1|Zmynd11|ENSMUSG00000021156.10|zinc finger, MYND domain containing 11 	ENSMUST00000110636.1|Zmynd11|ENSMUSG00000021156.10|zinc finger, MYND domain containing 11 	ENSMUST00000152725.1|Zmynd11|ENSMUSG00000021156.10|zinc finger, MYND domain containing 11
mm10_v2_chr7_+_96211656_96211680	0.100842	Zic3	ENSMUST00000107165.1|Tenm4|ENSMUSG00000048078.10|teneurin transmembrane protein 4
mm10_v2_chr19_-_5726240_5726317	0.100157	Zic3	ENSMUST00000049295.8|Ehbp1l1|ENSMUSG00000024937.8|EH domain binding protein 1-like 1 	ENSMUST00000075606.4|Ehbp1l1|ENSMUSG00000024937.8|EH domain binding protein 1-like 1
mm10_v2_chr17_+_85613432_85613608	0.0982398	Zic3	ENSMUST00000176081.1|Six3|ENSMUSG00000038805.9|sine oculis-related homeobox 3
mm10_v2_chr4_+_43632185_43632185	0.0978945	Zic3	ENSMUST00000107874.2|Npr2|ENSMUSG00000028469.9|natriuretic peptide receptor 2
mm10_v2_chr4_+_154964117_154964147	0.0957305	Zic3	ENSMUST00000030931.4|Pank4|ENSMUSG00000029056.7|pantothenate kinase 4 	ENSMUST00000070953.4|Pank4|ENSMUSG00000029056.7|pantothenate kinase 4
mm10_v2_chr17_+_25829036_25829120	0.0956188	Zic3	ENSMUST00000026832.7|Jmjd8|ENSMUSG00000025736.8|jumonji domain containing 8 	ENSMUST00000123582.1|Jmjd8|ENSMUSG00000025736.8|jumonji domain containing 8
mm10_v2_chr12_+_84773262_84773319	0.0949126	Zic3	ENSMUST00000021667.5|Isca2|ENSMUSG00000021241.6|iron-sulfur cluster assembly 2 homolog (S. cerevisiae)
mm10_v2_chr9_-_123678873_123678885	0.0944345	Zic3	ENSMUST00000040960.6|Slc6a20a|ENSMUSG00000036814.6|solute carrier family 6 (neurotransmitter transporter), member 20A
mm10_v2_chr1_-_106714217_106714330	0.0939866	Zic3	ENSMUST00000112751.1|Bcl2|ENSMUSG00000057329.6|B cell leukemia/lymphoma 2
mm10_v2_chr3_+_88142536_88142572	0.0935976	Zic3	ENSMUST00000107558.2|Mef2d|ENSMUSG00000001419.11|myocyte enhancer factor 2D 	ENSMUST00000107559.2|Mef2d|ENSMUSG00000001419.11|myocyte enhancer factor 2D
mm10_v2_chr11_+_78094660_78094678	0.0934898	Zic3	ENSMUST00000073705.5|Fam222b|ENSMUSG00000037750.10|family with sequence similarity 222, member B
mm10_v2_chr19_+_46396885_46397004	0.0933458	Zic3	ENSMUST00000039922.6|Sufu|ENSMUSG00000025231.10|suppressor of fused homolog (Drosophila) 	ENSMUST00000111867.2|Sufu|ENSMUSG00000025231.10|suppressor of fused homolog (Drosophila) 	ENSMUST00000120778.1|Sufu|ENSMUSG00000025231.10|suppressor of fused homolog (Drosophila)
mm10_v2_chr12_+_24572276_24572308	0.0913777	Zic3	ENSMUST00000085553.5|Grhl1|ENSMUSG00000020656.9|grainyhead-like 1 (Drosophila)
mm10_v2_chr6_+_146577859_146577948	0.0912944	Zic3	ENSMUST00000067404.6|Fgfr1op2|ENSMUSG00000040242.8|FGFR1 oncogene partner 2 	ENSMUST00000111663.2|Fgfr1op2|ENSMUSG00000040242.8|FGFR1 oncogene partner 2 	ENSMUST00000058245.4|Fgfr1op2|ENSMUSG00000040242.8|FGFR1 oncogene partner 2
mm10_v2_chr19_+_42045792_42045897	0.0912725	Zic3	ENSMUST00000172244.1|Hoga1|ENSMUSG00000025176.8|4-hydroxy-2-oxoglutarate aldolase 1 	ENSMUST00000081714.4|Hoga1|ENSMUSG00000025176.8|4-hydroxy-2-oxoglutarate aldolase 1
mm10_v2_chr18_-_67724560_67724599	0.0883032	Zic3	ENSMUST00000120934.1|Ptpn2|ENSMUSG00000024539.11|protein tyrosine phosphatase, non-receptor type 2 	ENSMUST00000025420.7|Ptpn2|ENSMUSG00000024539.11|protein tyrosine phosphatase, non-receptor type 2 	ENSMUST00000122412.1|Ptpn2|ENSMUSG00000024539.11|protein tyrosine phosphatase, non-receptor type 2
mm10_v2_chr9_+_107587711_107587746	0.0865879	Zic3	ENSMUST00000010192.5|Ifrd2|ENSMUSG00000010048.5|interferon-related developmental regulator 2
mm10_v2_chr9_+_45906513_45906569	0.0852706	Zic3	ENSMUST00000039059.6|Pcsk7|ENSMUSG00000035382.8|proprotein convertase subtilisin/kexin type 7
mm10_v2_chr1_-_172082757_172082795	0.0849747	Zic3	ENSMUST00000003550.4|Ncstn|ENSMUSG00000003458.6|nicastrin
mm10_v2_chr11_-_86544754_86544805	0.0846593	Zic3	ENSMUST00000138810.1|Rps6kb1|ENSMUSG00000020516.9|ribosomal protein S6 kinase, polypeptide 1 	ENSMUST00000058286.2|Rps6kb1|ENSMUSG00000020516.9|ribosomal protein S6 kinase, polypeptide 1 	ENSMUST00000154617.1|Rps6kb1|ENSMUSG00000020516.9|ribosomal protein S6 kinase, polypeptide 1
mm10_v2_chr17_-_24479034_24479083	0.0842542	Zic3	ENSMUST00000179163.1|Mlst8|ENSMUSG00000024142.8|MTOR associated protein, LST8 homolog (S. cerevisiae) 	ENSMUST00000070888.6|Mlst8|ENSMUSG00000024142.8|MTOR associated protein, LST8 homolog (S. cerevisiae)
mm10_v2_chr17_+_56326045_56326097	0.0831596	Zic3	ENSMUST00000139679.1|Kdm4b|ENSMUSG00000024201.6|lysine (K)-specific demethylase 4B 	ENSMUST00000025036.4|Kdm4b|ENSMUSG00000024201.6|lysine (K)-specific demethylase 4B 	ENSMUST00000086835.5|Kdm4b|ENSMUSG00000024201.6|lysine (K)-specific demethylase 4B
mm10_v2_chr4_+_57568144_57568160	0.082912	Zic3	ENSMUST00000102904.3|Palm2|ENSMUSG00000090053.3|paralemmin 2
mm10_v2_chr3_-_53657339_53657391	0.082759	Zic3	ENSMUST00000091137.4|Frem2|ENSMUSG00000037016.7|Fras1 related extracellular matrix protein 2
mm10_v2_chr2_-_127482499_127482577	0.082635	Zic3	ENSMUST00000088538.5|Kcnip3|ENSMUSG00000079056.6|Kv channel interacting protein 3, calsenilin
mm10_v2_chr9_+_106453838_106453911	0.0821554	Zic3	ENSMUST00000024260.6|Pcbp4|ENSMUSG00000023495.6|poly(rC) binding protein 4
mm10_v2_chrX_-_7574120_7574312	0.0811824	Zic3	ENSMUST00000045924.7|Ppp1r3f|ENSMUSG00000039556.10|protein phosphatase 1, regulatory (inhibitor) subunit 3F 	ENSMUST00000115742.2|Ppp1r3f|ENSMUSG00000039556.10|protein phosphatase 1, regulatory (inhibitor) subunit 3F 	ENSMUST00000150787.1|Ppp1r3f|ENSMUSG00000039556.10|protein phosphatase 1, regulatory (inhibitor) subunit 3F
mm10_v2_chr11_-_100759740_100759754	0.0808878	Zic3	ENSMUST00000107361.2|Kcnh4|ENSMUSG00000035355.9|potassium voltage-gated channel, subfamily H (eag-related), member 4
mm10_v2_chr4_+_131873608_131873679	0.0808807	Zic3	ENSMUST00000053819.3|Srsf4|ENSMUSG00000028911.10|serine/arginine-rich splicing factor 4
mm10_v2_chr3_+_103279293_103279293	0.0798236	Zic3	ENSMUST00000029444.6|Trim33|ENSMUSG00000033014.6|tripartite motif-containing 33 	ENSMUST00000106860.1|Trim33|ENSMUSG00000033014.6|tripartite motif-containing 33
mm10_v2_chr7_+_30291941_30291968	0.079207	Zic3	ENSMUST00000144508.1|Clip3|ENSMUSG00000013921.8|CAP-GLY domain containing linker protein 3
mm10_v2_chr3_+_90254163_90254252	0.0784388	Zic3	ENSMUST00000029545.8|Crtc2|ENSMUSG00000027936.12|CREB regulated transcription coactivator 2
mm10_v2_chr17_-_51179249_51179349	0.0782493	Zic3	ENSMUST00000024717.8|Tbc1d5|ENSMUSG00000023923.9|TBC1 domain family, member 5
mm10_v2_chr17_+_14279506_14279513	0.0782305	Zic3	ENSMUST00000024660.8|Smoc2|ENSMUSG00000023886.9|SPARC related modular calcium binding 2
mm10_v2_chr12_-_76709997_76710026	0.0758037	Zic3	ENSMUST00000166101.1|Sptb|ENSMUSG00000021061.9|spectrin beta, erythrocytic
mm10_v2_chr16_+_32332238_32332266	0.0752087	Zic3	ENSMUST00000115151.3|Ubxn7|ENSMUSG00000053774.8|UBX domain protein 7
mm10_v2_chr11_-_102316660_102316680	0.0747545	Zic3	ENSMUST00000146896.2|Ubtf|ENSMUSG00000020923.11|upstream binding transcription factor, RNA polymerase I 	ENSMUST00000079589.4|Ubtf|ENSMUSG00000020923.11|upstream binding transcription factor, RNA polymerase I
mm10_v2_chr17_-_23586214_23586269	0.0702102	Zic3	ENSMUST00000115516.3|Zfp13|ENSMUSG00000062012.7|zinc finger protein 13
mm10_v2_chr2_-_131187282_131187282	0.0688485	Zic3	ENSMUST00000028801.1|Spef1|ENSMUSG00000027329.3|sperm flagellar 1
mm10_v2_chr9_+_108826320_108826320	0.0682724	Zic3	ENSMUST00000024238.5|Celsr3|ENSMUSG00000023473.6|cadherin, EGF LAG seven-pass G-type receptor 3 (flamingo homolog, Drosophila)
mm10_v2_chr1_+_91366412_91366433	0.0671933	Zic3	ENSMUST00000086861.5|Fam132b|ENSMUSG00000047443.8|family with sequence similarity 132, member B
mm10_v2_chr15_-_76209056_76209165	0.066453	Zic3	ENSMUST00000071869.5|Plec|ENSMUSG00000022565.9|plectin 	ENSMUST00000170915.1|Plec|ENSMUSG00000022565.9|plectin
mm10_v2_chr19_-_23448322_23448350	0.0662952	Zic3	ENSMUST00000036069.6|Mamdc2|ENSMUSG00000033207.6|MAM domain containing 2
mm10_v2_chr10_-_63023881_63023907	0.0661957	Zic3	ENSMUST00000118898.1|Hnrnph3|ENSMUSG00000020069.10|heterogeneous nuclear ribonucleoprotein H3 	ENSMUST00000020263.7|Hnrnph3|ENSMUSG00000020069.10|heterogeneous nuclear ribonucleoprotein H3
mm10_v2_chr4_-_16013796_16013830	0.0644686	Zic3	ENSMUST00000149891.1|Osgin2|ENSMUSG00000041153.3|oxidative stress induced growth inhibitor family member 2
mm10_v2_chr10_-_26373956_26374088	0.0630172	Zic3	ENSMUST00000105519.3|L3mbtl3|ENSMUSG00000039089.8|l(3)mbt-like 3 (Drosophila) 	ENSMUST00000040219.6|L3mbtl3|ENSMUSG00000039089.8|l(3)mbt-like 3 (Drosophila)
mm10_v2_chr19_-_10881723_10881766	0.0626323	Zic3	ENSMUST00000144681.1|Tmem109|ENSMUSG00000034659.8|transmembrane protein 109
mm10_v2_chr14_+_31217850_31217866	0.0619879	Zic3	ENSMUST00000090180.2|Sema3g|ENSMUSG00000021904.5|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3G
mm10_v2_chr7_-_4812351_4812362	0.0613927	Zic3	ENSMUST00000079496.7|Ube2s|ENSMUSG00000060860.7|ubiquitin-conjugating enzyme E2S
mm10_v2_chr9_+_46012810_46012821	0.0591275	Zic3	ENSMUST00000126865.1|Sik3|ENSMUSG00000034135.8|SIK family kinase 3
mm10_v2_chr5_-_114273702_114273807	0.0587479	Zic3	ENSMUST00000144050.1|Foxn4|ENSMUSG00000042002.5|forkhead box N4 	ENSMUST00000044790.5|Foxn4|ENSMUSG00000042002.5|forkhead box N4
mm10_v2_chr2_-_103073335_103073513	0.057807	Zic3	ENSMUST00000132449.1|Pdhx|ENSMUSG00000010914.4|pyruvate dehydrogenase complex, component X 	ENSMUST00000111183.1|Pdhx|ENSMUSG00000010914.4|pyruvate dehydrogenase complex, component X 	ENSMUST00000011058.2|Pdhx|ENSMUSG00000010914.4|pyruvate dehydrogenase complex, component X
mm10_v2_chr1_-_191907527_191907527	0.0572729	Zic3	ENSMUST00000069573.5|1700034H15Rik|ENSMUSG00000055833.8|RIKEN cDNA 1700034H15 gene
mm10_v2_chr8_+_106211016_106211043	0.0572381	Zic3	ENSMUST00000109297.1|Prmt7|ENSMUSG00000060098.5|protein arginine N-methyltransferase 7
mm10_v2_chr5_+_137758133_137758213	0.0568067	Zic3	ENSMUST00000141733.1|Tsc22d4|ENSMUSG00000029723.10|TSC22 domain family, member 4 	ENSMUST00000110985.1|Tsc22d4|ENSMUSG00000029723.10|TSC22 domain family, member 4
mm10_v2_chr2_+_152226839_152226908	0.0563677	Zic3	ENSMUST00000099224.3|Csnk2a1|ENSMUSG00000074698.4|casein kinase 2, alpha 1 polypeptide 	ENSMUST00000124791.1|Csnk2a1|ENSMUSG00000074698.4|casein kinase 2, alpha 1 polypeptide 	ENSMUST00000133119.1|Csnk2a1|ENSMUSG00000074698.4|casein kinase 2, alpha 1 polypeptide
mm10_v2_chr2_+_85037448_85037530	0.0542089	Zic3	ENSMUST00000168266.1|Ssrp1|ENSMUSG00000027067.10|structure specific recognition protein 1 	ENSMUST00000130729.1|Ssrp1|ENSMUSG00000027067.10|structure specific recognition protein 1
mm10_v2_chr1_-_168431695_168431750	0.0529538	Zic3	ENSMUST00000176790.1|Pbx1|ENSMUSG00000052534.9|pre B cell leukemia homeobox 1
mm10_v2_chrX_+_37126777_37126795	0.0525285	Zic3	ENSMUST00000016553.4|Nkap|ENSMUSG00000016409.4|NFKB activating protein
mm10_v2_chr6_-_122609964_122610087	0.0523532	Zic3	ENSMUST00000032211.4|Gdf3|ENSMUSG00000030117.4|growth differentiation factor 3
mm10_v2_chr11_+_76945719_76945821	0.0517634	Zic3	ENSMUST00000125145.1|Blmh|ENSMUSG00000020840.4|bleomycin hydrolase
mm10_v2_chr6_-_124756478_124756527	0.0511505	Zic3	ENSMUST00000088357.5|Atn1|ENSMUSG00000004263.9|atrophin 1
mm10_v2_chr2_+_32609043_32609084	0.0500271	Zic3	ENSMUST00000128811.1|St6galnac6|ENSMUSG00000026811.12|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6
mm10_v2_chr9_-_88438940_88438958	0.0490016	Zic3	ENSMUST00000165315.1|Snx14|ENSMUSG00000032422.11|sorting nexin 14 	ENSMUST00000173039.1|Snx14|ENSMUSG00000032422.11|sorting nexin 14
mm10_v2_chr11_+_85832551_85832551	0.0481523	Zic3	ENSMUST00000000095.6|Tbx2|ENSMUSG00000000093.6|T-box 2
mm10_v2_chr7_-_100656953_100657103	0.0481326	Zic3	ENSMUST00000107046.1|Plekhb1|ENSMUSG00000030701.10|pleckstrin homology domain containing, family B (evectins) member 1 	ENSMUST00000107045.1|Plekhb1|ENSMUSG00000030701.10|pleckstrin homology domain containing, family B (evectins) member 1 	ENSMUST00000139708.1|Plekhb1|ENSMUSG00000030701.10|pleckstrin homology domain containing, family B (evectins) member 1
mm10_v2_chr16_+_94370618_94370784	0.0469848	Zic3	ENSMUST00000117648.1|Ttc3|ENSMUSG00000040785.11|tetratricopeptide repeat domain 3 	ENSMUST00000147352.1|Ttc3|ENSMUSG00000040785.11|tetratricopeptide repeat domain 3 	ENSMUST00000150346.1|Ttc3|ENSMUSG00000040785.11|tetratricopeptide repeat domain 3 	ENSMUST00000155692.1|Ttc3|ENSMUSG00000040785.11|tetratricopeptide repeat domain 3 	ENSMUST00000153988.1|Ttc3|ENSMUSG00000040785.11|tetratricopeptide repeat domain 3 	ENSMUST00000141856.1|Ttc3|ENSMUSG00000040785.11|tetratricopeptide repeat domain 3 	ENSMUST00000152117.1|Ttc3|ENSMUSG00000040785.11|tetratricopeptide repeat domain 3 	ENSMUST00000150097.1|Ttc3|ENSMUSG00000040785.11|tetratricopeptide repeat domain 3 	ENSMUST00000122895.1|Ttc3|ENSMUSG00000040785.11|tetratricopeptide repeat domain 3 	ENSMUST00000151770.1|Ttc3|ENSMUSG00000040785.11|tetratricopeptide repeat domain 3
mm10_v2_chr1_+_135729147_135729234	0.0457664	Zic3	ENSMUST00000027677.7|Csrp1|ENSMUSG00000026421.8|cysteine and glycine-rich protein 1
mm10_v2_chr10_+_28074813_28074873	0.0442197	Zic3	ENSMUST00000166468.1|Ptprk|ENSMUSG00000019889.9|protein tyrosine phosphatase, receptor type, K
mm10_v2_chr12_-_31499541_31499616	0.0424926	Zic3	ENSMUST00000101499.3|Cbll1|ENSMUSG00000020659.9|Casitas B-lineage lymphoma-like 1 	ENSMUST00000064240.6|Cbll1|ENSMUSG00000020659.9|Casitas B-lineage lymphoma-like 1 	ENSMUST00000085487.5|Cbll1|ENSMUSG00000020659.9|Casitas B-lineage lymphoma-like 1
mm10_v2_chr17_+_34898931_34898986	0.0420025	Zic3	ENSMUST00000097342.3|Ehmt2|ENSMUSG00000013787.9|euchromatic histone lysine N-methyltransferase 2 	ENSMUST00000013931.5|Ehmt2|ENSMUSG00000013787.9|euchromatic histone lysine N-methyltransferase 2
mm10_v2_chr14_-_56811716_56811716	0.0402004	Zic3	ENSMUST00000039812.9|Zmym5|ENSMUSG00000040123.10|zinc finger, MYM-type 5 	ENSMUST00000111285.2|Zmym5|ENSMUSG00000040123.10|zinc finger, MYM-type 5
mm10_v2_chr11_+_67078293_67078307	0.0388499	Zic3	ENSMUST00000108689.1|Myh3|ENSMUSG00000020908.8|myosin, heavy polypeptide 3, skeletal muscle, embryonic 	ENSMUST00000165221.1|Myh3|ENSMUSG00000020908.8|myosin, heavy polypeptide 3, skeletal muscle, embryonic 	ENSMUST00000007301.7|Myh3|ENSMUSG00000020908.8|myosin, heavy polypeptide 3, skeletal muscle, embryonic
mm10_v2_chr9_+_55149364_55149395	0.0381096	Zic3	ENSMUST00000121677.1|Ube2q2|ENSMUSG00000032307.10|ubiquitin-conjugating enzyme E2Q (putative) 2
mm10_v2_chr9_-_108083330_108083370	0.0365568	Zic3	ENSMUST00000159372.1|Rnf123|ENSMUSG00000041528.9|ring finger protein 123 	ENSMUST00000160249.1|Rnf123|ENSMUSG00000041528.9|ring finger protein 123
mm10_v2_chr2_-_148443543_148443582	0.0354446	Zic3	ENSMUST00000099269.3|Cd93|ENSMUSG00000027435.8|CD93 antigen
mm10_v2_chr16_+_58670208_58670246	0.0348195	Zic3	ENSMUST00000060077.5|Cpox|ENSMUSG00000022742.5|coproporphyrinogen oxidase
mm10_v2_chr7_-_126377401_126377450	0.0347754	Zic3	ENSMUST00000119846.1|Spns1|ENSMUSG00000030741.9|spinster homolog 1 	ENSMUST00000119754.1|Spns1|ENSMUSG00000030741.9|spinster homolog 1 	ENSMUST00000032994.8|Spns1|ENSMUSG00000030741.9|spinster homolog 1
mm10_v2_chr17_-_56935388_56935504	0.0346874	Zic3	ENSMUST00000025053.8|Mllt1|ENSMUSG00000024212.8|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 1
mm10_v2_chr19_-_6921753_6921803	0.0345287	Zic3	ENSMUST00000173635.1|Esrra|ENSMUSG00000024955.7|estrogen related receptor, alpha
mm10_v2_chr19_+_8888880_8888925	0.0342728	Zic3	ENSMUST00000096251.3|1810009A15Rik|ENSMUSG00000071653.3|RIKEN cDNA 1810009A15 gene
mm10_v2_chrX_+_7762652_7762695	0.0325345	Zic3	ENSMUST00000077680.3|Tfe3|ENSMUSG00000000134.11|transcription factor E3 	ENSMUST00000079542.6|Tfe3|ENSMUSG00000000134.11|transcription factor E3 	ENSMUST00000115679.1|Tfe3|ENSMUSG00000000134.11|transcription factor E3 	ENSMUST00000137467.1|Tfe3|ENSMUSG00000000134.11|transcription factor E3
mm10_v2_chr5_-_20882072_20882124	0.0325091	Zic3	ENSMUST00000118174.1|Phtf2|ENSMUSG00000039987.9|putative homeodomain transcription factor 2
mm10_v2_chr5_+_92137896_92137939	0.0324897	Zic3	ENSMUST00000031355.6|Uso1|ENSMUSG00000029407.7|USO1 vesicle docking factor
mm10_v2_chr1_+_172082796_172082855	0.0323919	Zic3	ENSMUST00000027833.5|Copa|ENSMUSG00000026553.11|coatomer protein complex subunit alpha
mm10_v2_chr1_-_163403627_163403679	0.0311357	Zic3	ENSMUST00000045138.4|Gorab|ENSMUSG00000040124.4|golgin, RAB6-interacting
mm10_v2_chr7_-_80401707_80401754	0.030891	Zic3	ENSMUST00000120753.1|Furin|ENSMUSG00000030530.9|furin (paired basic amino acid cleaving enzyme)
mm10_v2_chr1_-_119422239_119422291	0.0308141	Zic3	ENSMUST00000038765.5|Inhbb|ENSMUSG00000037035.5|inhibin beta-B
mm10_v2_chr17_+_46681038_46681184	0.0299381	Zic3	ENSMUST00000002845.6|Mea1|ENSMUSG00000002768.7|male enhanced antigen 1
mm10_v2_chr17_+_86963077_86963094	0.0299266	Zic3	ENSMUST00000024956.8|Rhoq|ENSMUSG00000024143.8|ras homolog gene family, member Q
mm10_v2_chr5_-_24445166_24445220	0.0289534	Zic3	ENSMUST00000115043.1|Fastk|ENSMUSG00000028959.8|Fas-activated serine/threonine kinase 	ENSMUST00000115041.1|Fastk|ENSMUSG00000028959.8|Fas-activated serine/threonine kinase
mm10_v2_chr14_+_3449379_3449379	0.0284554	Zic3	ENSMUST00000096168.5|Gm10408|ENSMUSG00000072739.4|predicted gene 10408
mm10_v2_chr4_-_133672601_133672652	0.027883	Zic3	ENSMUST00000062118.4|Pigv|ENSMUSG00000043257.9|phosphatidylinositol glycan anchor biosynthesis, class V 	ENSMUST00000067902.6|Pigv|ENSMUSG00000043257.9|phosphatidylinositol glycan anchor biosynthesis, class V
mm10_v2_chr10_-_127522428_127522454	0.0277852	Zic3	ENSMUST00000026470.4|Shmt2|ENSMUSG00000025403.4|serine hydroxymethyltransferase 2 (mitochondrial)
mm10_v2_chr17_-_83631892_83631934	0.0275652	Zic3	ENSMUST00000051482.1|Kcng3|ENSMUSG00000045053.1|potassium voltage-gated channel, subfamily G, member 3
mm10_v2_chr1_+_72824482_72824503	0.027213	Zic3	ENSMUST00000047328.4|Igfbp2|ENSMUSG00000039323.12|insulin-like growth factor binding protein 2
mm10_v2_chr11_+_17211912_17211964	0.0269468	Zic3	ENSMUST00000046955.6|Wdr92|ENSMUSG00000078970.5|WD repeat domain 92
mm10_v2_chr10_+_127063599_127063655	0.0205457	Zic3	ENSMUST00000120226.1|Cdk4|ENSMUSG00000006728.6|cyclin-dependent kinase 4 	ENSMUST00000133115.1|Cdk4|ENSMUSG00000006728.6|cyclin-dependent kinase 4
mm10_v2_chr12_+_84316830_84316865	0.0124044	Zic3	ENSMUST00000045931.10|Zfp410|ENSMUSG00000042472.10|zinc finger protein 410
mm10_v2_chr11_-_48826655_48826655	0.0122577	Zic3	ENSMUST00000104959.1|Gm12184|ENSMUSG00000078154.2|predicted gene 12184
mm10_v2_chr8_-_72492592_72492662	0.0107344	Zic3	ENSMUST00000152080.1|Slc35e1|ENSMUSG00000019731.7|solute carrier family 35, member E1
mm10_v2_chr5_+_12383156_12383177	0.0104613	Zic3	ENSMUST00000030868.6|Sema3d|ENSMUSG00000040254.7|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D
mm10_v2_chr14_-_37098211_37098311	0.0103834	Zic3	ENSMUST00000022337.9|Cdhr1|ENSMUSG00000021803.9|cadherin-related family member 1
mm10_v2_chr13_-_96670838_96670936	0.0101599	Zic3	ENSMUST00000022176.8|Hmgcr|ENSMUSG00000021670.8|3-hydroxy-3-methylglutaryl-Coenzyme A reductase
mm10_v2_chr6_-_86669136_86669164	0.0099913	Zic3	ENSMUST00000001184.7|Mxd1|ENSMUSG00000001156.7|MAX dimerization protein 1
mm10_v2_chr4_-_70534904_70534987	0.00858867	Zic3	ENSMUST00000107359.2|Megf9|ENSMUSG00000039270.3|multiple EGF-like-domains 9
mm10_v2_chr2_-_144527341_144527424	0.00769626	Zic3	ENSMUST00000163701.1|Dzank1|ENSMUSG00000037259.9|double zinc ribbon and ankyrin repeat domains 1 	ENSMUST00000081982.5|Dzank1|ENSMUSG00000037259.9|double zinc ribbon and ankyrin repeat domains 1
mm10_v2_chr9_-_88438898_88438936	0.00651374	Zic3	ENSMUST00000173011.1|Snx14|ENSMUSG00000032422.11|sorting nexin 14 	ENSMUST00000174806.1|Snx14|ENSMUSG00000032422.11|sorting nexin 14
mm10_v2_chr9_+_91378636_91378646	0.00641336	Zic3	ENSMUST00000066384.5|Zic4|ENSMUSG00000036972.8|zinc finger protein of the cerebellum 4
mm10_v2_chr2_+_69722797_69722840	0.00511428	Zic3	ENSMUST00000090858.3|Ppig|ENSMUSG00000042133.10|peptidyl-prolyl isomerase G (cyclophilin G)
mm10_v2_chrX_+_57053549_57053615	0.00449598	Zic3	ENSMUST00000114751.2|Htatsf1|ENSMUSG00000067873.5|HIV TAT specific factor 1 	ENSMUST00000088652.5|Htatsf1|ENSMUSG00000067873.5|HIV TAT specific factor 1
mm10_v2_chr19_+_6400611_6400623	0.00439932	Zic3	ENSMUST00000113467.1|Rasgrp2|ENSMUSG00000032946.10|RAS, guanyl releasing protein 2
mm10_v2_chr17_+_24720063_24720251	0.00252219	Zic3	ENSMUST00000170715.1|Rps2|ENSMUSG00000044533.9|ribosomal protein S2 	ENSMUST00000054289.6|Rps2|ENSMUSG00000044533.9|ribosomal protein S2 	ENSMUST00000146867.1|Rps2|ENSMUSG00000044533.9|ribosomal protein S2
mm10_v2_chr10_-_75517856_75517972	0.00238718	Zic3	ENSMUST00000123505.1|Gucd1|ENSMUSG00000033416.8|guanylyl cyclase domain containing 1 	ENSMUST00000147269.1|Gucd1|ENSMUSG00000033416.8|guanylyl cyclase domain containing 1 	ENSMUST00000118936.1|Gucd1|ENSMUSG00000033416.8|guanylyl cyclase domain containing 1
mm10_v2_chr9_-_22131801_22131874	0.00199895	Zic3	ENSMUST00000069330.6|Acp5|ENSMUSG00000001348.8|acid phosphatase 5, tartrate resistant
mm10_v2_chr2_-_103796989_103797104	0.00110323	Zic3	ENSMUST00000111147.1|Caprin1|ENSMUSG00000027184.8|cell cycle associated protein 1
mm10_v2_chr7_-_30169701_30169766	0.00103061	Zic3	ENSMUST00000062181.7|Zfp146|ENSMUSG00000037029.7|zinc finger protein 146
mm10_v2_chr5_+_137778849_137778935	0.000666776	Zic3	ENSMUST00000126126.1|Ppp1r35|ENSMUSG00000029725.4|protein phosphatase 1, regulatory subunit 35 	ENSMUST00000031739.4|Ppp1r35|ENSMUSG00000029725.4|protein phosphatase 1, regulatory subunit 35
mm10_v2_chr11_+_97799772_97799838	0.00056535	Zic3	ENSMUST00000129558.1|Lasp1|ENSMUSG00000038366.9|LIM and SH3 protein 1
mm10_v2_chr10_+_75518042_75518046	0.000240444	Zic3	ENSMUST00000020397.8|Snrpd3|ENSMUSG00000020180.8|small nuclear ribonucleoprotein D3
mm10_v2_chr9_+_59750876_59750918	0.000202266	Zic3	ENSMUST00000136740.1|Myo9a|ENSMUSG00000039585.9|myosin IXa 	ENSMUST00000135298.1|Myo9a|ENSMUSG00000039585.9|myosin IXa 	ENSMUST00000128341.1|Myo9a|ENSMUSG00000039585.9|myosin IXa
