mm10_v2_chr6_+_141524379_141524449	2.18336	Zic4	ENSMUST00000032362.9|Slco1c1|ENSMUSG00000030235.11|solute carrier organic anion transporter family, member 1c1
mm10_v2_chr2_+_180499893_180499976	2.05334	Zic4	ENSMUST00000029084.2|Ntsr1|ENSMUSG00000027568.3|neurotensin receptor 1
mm10_v2_chr4_+_152338619_152338709	1.70699	Zic4	ENSMUST00000030775.5|Chd5|ENSMUSG00000005045.10|chromodomain helicase DNA binding protein 5 	ENSMUST00000164662.1|Chd5|ENSMUSG00000005045.10|chromodomain helicase DNA binding protein 5
mm10_v2_chr4_+_152338887_152338967	1.59124	Zic4	ENSMUST00000005175.4|Chd5|ENSMUSG00000005045.10|chromodomain helicase DNA binding protein 5
mm10_v2_chr4_-_64046925_64047015	1.44664	Zic4	ENSMUST00000107377.3|Tnc|ENSMUSG00000028364.9|tenascin C
mm10_v2_chr4_+_141368116_141368220	1.21752	Zic4	ENSMUST00000006380.4|Fam131c|ENSMUSG00000006218.4|family with sequence similarity 131, member C
mm10_v2_chr9_-_29412204_29412277	1.18029	Zic4	ENSMUST00000115237.1|Ntm|ENSMUSG00000059974.4|neurotrimin
mm10_v2_chr17_+_46297917_46298083	1.16507	Zic4	ENSMUST00000166617.1|Dlk2|ENSMUSG00000047428.8|delta-like 2 homolog (Drosophila) 	ENSMUST00000170271.1|Dlk2|ENSMUSG00000047428.8|delta-like 2 homolog (Drosophila)
mm10_v2_chr10_+_106470281_106470367	1.13806	Zic4	ENSMUST00000029404.9|Ppfia2|ENSMUSG00000053825.8|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2 	ENSMUST00000169303.1|Ppfia2|ENSMUSG00000053825.8|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2
mm10_v2_chr19_-_57008187_57008228	1.11489	Zic4	ENSMUST00000118800.1|Afap1l2|ENSMUSG00000025083.11|actin filament associated protein 1-like 2 	ENSMUST00000111584.2|Afap1l2|ENSMUSG00000025083.11|actin filament associated protein 1-like 2 	ENSMUST00000122359.1|Afap1l2|ENSMUSG00000025083.11|actin filament associated protein 1-like 2 	ENSMUST00000148049.1|Afap1l2|ENSMUSG00000025083.11|actin filament associated protein 1-like 2
mm10_v2_chr11_+_24076529_24076563	1.06842	Zic4	ENSMUST00000148087.1|Gm12063|ENSMUSG00000085167.1|predicted gene 12063
mm10_v2_chr6_-_59426279_59426345	1.01613	Zic4	ENSMUST00000051065.4|Gprin3|ENSMUSG00000045441.4|GPRIN family member 3
mm10_v2_chr1_-_43163891_43163962	1.01247	Zic4	ENSMUST00000008280.7|Fhl2|ENSMUSG00000008136.8|four and a half LIM domains 2
mm10_v2_chr14_-_64455903_64455903	0.917242	Zic4	ENSMUST00000067927.7|Msra|ENSMUSG00000054733.8|methionine sulfoxide reductase A
mm10_v2_chr19_+_4099998_4100083	0.903529	Zic4	ENSMUST00000049658.7|Pitpnm1|ENSMUSG00000024851.7|phosphatidylinositol transfer protein, membrane-associated 1
mm10_v2_chr5_-_139325616_139325627	0.863977	Zic4	ENSMUST00000110865.1|Adap1|ENSMUSG00000056413.10|ArfGAP with dual PH domains 1
mm10_v2_chr4_+_104367549_104367592	0.813494	Zic4	ENSMUST00000106830.2|Dab1|ENSMUSG00000028519.10|disabled 1
mm10_v2_chr7_-_16476765_16476792	0.765636	Zic4	ENSMUST00000002053.8|Npas1|ENSMUSG00000001988.8|neuronal PAS domain protein 1
mm10_v2_chr7_-_47133395_47133437	0.762962	Zic4	ENSMUST00000107617.1|Ptpn5|ENSMUSG00000030854.9|protein tyrosine phosphatase, non-receptor type 5
mm10_v2_chr7_-_47133684_47133720	0.76132	Zic4	ENSMUST00000102626.1|Ptpn5|ENSMUSG00000030854.9|protein tyrosine phosphatase, non-receptor type 5
mm10_v2_chr1_+_10039762_10039792	0.730194	Zic4	ENSMUST00000122156.1|Cspp1|ENSMUSG00000056763.10|centrosome and spindle pole associated protein 1 	ENSMUST00000118263.1|Cspp1|ENSMUSG00000056763.10|centrosome and spindle pole associated protein 1 	ENSMUST00000119714.1|Cspp1|ENSMUSG00000056763.10|centrosome and spindle pole associated protein 1
mm10_v2_chr2_+_180598219_180598226	0.677989	Zic4	ENSMUST00000103059.1|Col9a3|ENSMUSG00000027570.9|collagen, type IX, alpha 3
mm10_v2_chrX_+_73503074_73503116	0.672175	Zic4	ENSMUST00000114479.1|Atp2b3|ENSMUSG00000031376.9|ATPase, Ca++ transporting, plasma membrane 3 	ENSMUST00000088429.1|Atp2b3|ENSMUSG00000031376.9|ATPase, Ca++ transporting, plasma membrane 3 	ENSMUST00000033744.5|Atp2b3|ENSMUSG00000031376.9|ATPase, Ca++ transporting, plasma membrane 3
mm10_v2_chr19_+_4855129_4855269	0.662765	Zic4	ENSMUST00000119694.1|Ctsf|ENSMUSG00000083282.2|cathepsin F
mm10_v2_chr14_+_26259109_26259109	0.656199	Zic4	ENSMUST00000174494.1|Duxbl3|ENSMUSG00000072672.4|double homeobox B-like 3
mm10_v2_chr2_-_152951547_152951608	0.653215	Zic4	ENSMUST00000037715.6|Dusp15|ENSMUSG00000042662.10|dual specificity phosphatase-like 15
mm10_v2_chr14_+_26119811_26119811	0.636597	Zic4	ENSMUST00000173617.1|Duxbl2|ENSMUSG00000072675.6|doubl homeobox B-like 2
mm10_v2_chr14_+_25980039_25980039	0.628007	Zic4	ENSMUST00000173155.1|Duxbl1|ENSMUSG00000048502.8|double homeobox B-like 1
mm10_v2_chr1_-_21961581_21961581	0.619974	Zic4	ENSMUST00000029667.6|Kcnq5|ENSMUSG00000028033.10|potassium voltage-gated channel, subfamily Q, member 5 	ENSMUST00000173058.1|Kcnq5|ENSMUSG00000028033.10|potassium voltage-gated channel, subfamily Q, member 5 	ENSMUST00000173404.1|Kcnq5|ENSMUSG00000028033.10|potassium voltage-gated channel, subfamily Q, member 5
mm10_v2_chr17_-_29237759_29237827	0.601608	Zic4	ENSMUST00000137727.1|Cpne5|ENSMUSG00000024008.9|copine V 	ENSMUST00000024805.7|Cpne5|ENSMUSG00000024008.9|copine V
mm10_v2_chr7_-_16286744_16286795	0.586272	Zic4	ENSMUST00000150528.2|Ccdc9|ENSMUSG00000041375.12|coiled-coil domain containing 9 	ENSMUST00000118976.2|Ccdc9|ENSMUSG00000041375.12|coiled-coil domain containing 9 	ENSMUST00000146609.2|Ccdc9|ENSMUSG00000041375.12|coiled-coil domain containing 9
mm10_v2_chr4_-_129121234_129121315	0.574358	Zic4	ENSMUST00000030572.3|Hpca|ENSMUSG00000028785.6|hippocalcin
mm10_v2_chr9_-_89622986_89622986	0.571024	Zic4	ENSMUST00000044491.6|AF529169|ENSMUSG00000039313.8|cDNA sequence AF529169
mm10_v2_chr1_+_75546449_75546514	0.559075	Zic4	ENSMUST00000150142.1|Slc4a3|ENSMUSG00000006576.10|solute carrier family 4 (anion exchanger), member 3
mm10_v2_chr2_-_152951688_152951700	0.552108	Zic4	ENSMUST00000109811.3|Dusp15|ENSMUSG00000042662.10|dual specificity phosphatase-like 15
mm10_v2_chr11_+_93996082_93996103	0.523807	Zic4	ENSMUST00000041956.7|Spag9|ENSMUSG00000020859.10|sperm associated antigen 9
mm10_v2_chrX_+_85574018_85574150	0.517926	Zic4	ENSMUST00000048250.3|Tab3|ENSMUSG00000035476.3|TGF-beta activated kinase 1/MAP3K7 binding protein 3 	ENSMUST00000137438.1|Tab3|ENSMUSG00000035476.3|TGF-beta activated kinase 1/MAP3K7 binding protein 3 	ENSMUST00000146063.1|Tab3|ENSMUSG00000035476.3|TGF-beta activated kinase 1/MAP3K7 binding protein 3
mm10_v2_chr11_+_98741805_98741816	0.512282	Zic4	ENSMUST00000064187.5|Thra|ENSMUSG00000058756.7|thyroid hormone receptor alpha
mm10_v2_chr2_-_152951456_152951540	0.510504	Zic4	ENSMUST00000123121.2|Dusp15|ENSMUSG00000042662.10|dual specificity phosphatase-like 15
mm10_v2_chr19_-_6235804_6235872	0.508851	Zic4	ENSMUST00000025695.9|Ppp2r5b|ENSMUSG00000024777.9|protein phosphatase 2, regulatory subunit B (B56), beta isoform
mm10_v2_chr11_+_98741871_98741894	0.500135	Zic4	ENSMUST00000103139.4|Thra|ENSMUSG00000058756.7|thyroid hormone receptor alpha
mm10_v2_chr17_+_37045963_37045975	0.493499	Zic4	ENSMUST00000025338.9|Gabbr1|ENSMUSG00000024462.11|gamma-aminobutyric acid (GABA) B receptor, 1
mm10_v2_chr9_-_107710475_107710475	0.47915	Zic4	ENSMUST00000080560.3|Sema3f|ENSMUSG00000034684.7|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3F
mm10_v2_chr17_-_83631892_83631934	0.477585	Zic4	ENSMUST00000051482.1|Kcng3|ENSMUSG00000045053.1|potassium voltage-gated channel, subfamily G, member 3
mm10_v2_chr4_-_24851079_24851124	0.473223	Zic4	ENSMUST00000084781.5|Klhl32|ENSMUSG00000040387.10|kelch-like 32 	ENSMUST00000108218.3|Klhl32|ENSMUSG00000040387.10|kelch-like 32
mm10_v2_chr11_-_70687917_70687981	0.468864	Zic4	ENSMUST00000108545.2|Camta2|ENSMUSG00000040712.10|calmodulin binding transcription activator 2 	ENSMUST00000120261.1|Camta2|ENSMUSG00000040712.10|calmodulin binding transcription activator 2 	ENSMUST00000036299.7|Camta2|ENSMUSG00000040712.10|calmodulin binding transcription activator 2 	ENSMUST00000119120.1|Camta2|ENSMUSG00000040712.10|calmodulin binding transcription activator 2 	ENSMUST00000100933.3|Camta2|ENSMUSG00000040712.10|calmodulin binding transcription activator 2
mm10_v2_chr15_-_33687840_33687883	0.468697	Zic4	ENSMUST00000042021.3|Tspyl5|ENSMUSG00000038984.3|testis-specific protein, Y-encoded-like 5
mm10_v2_chr19_+_48206025_48206163	0.459756	Zic4	ENSMUST00000078880.5|Sorcs3|ENSMUSG00000063434.5|sortilin-related VPS10 domain containing receptor 3
mm10_v2_chr6_-_97487801_97487879	0.456869	Zic4	ENSMUST00000113353.1|Frmd4b|ENSMUSG00000030064.10|FERM domain containing 4B 	ENSMUST00000032146.7|Frmd4b|ENSMUSG00000030064.10|FERM domain containing 4B
mm10_v2_chr4_-_129121699_129121740	0.451483	Zic4	ENSMUST00000135763.1|Hpca|ENSMUSG00000028785.6|hippocalcin 	ENSMUST00000149763.1|Hpca|ENSMUSG00000028785.6|hippocalcin 	ENSMUST00000164649.1|Hpca|ENSMUSG00000028785.6|hippocalcin
mm10_v2_chr12_+_16894894_16894978	0.451132	Zic4	ENSMUST00000020904.6|Rock2|ENSMUSG00000020580.9|Rho-associated coiled-coil containing protein kinase 2
mm10_v2_chr11_+_46055973_46056068	0.444756	Zic4	ENSMUST00000011400.7|Adam19|ENSMUSG00000011256.10|a disintegrin and metallopeptidase domain 19 (meltrin beta)
mm10_v2_chrX_-_111697069_111697127	0.444658	Zic4	ENSMUST00000113422.2|Hdx|ENSMUSG00000034551.6|highly divergent homeobox 	ENSMUST00000038472.5|Hdx|ENSMUSG00000034551.6|highly divergent homeobox
mm10_v2_chr11_-_85139939_85140038	0.422154	Zic4	ENSMUST00000108075.2|Usp32|ENSMUSG00000000804.8|ubiquitin specific peptidase 32
mm10_v2_chr2_-_167062607_167062724	0.416049	Zic4	ENSMUST00000128676.1|Znfx1|ENSMUSG00000039501.8|zinc finger, NFX1-type containing 1
mm10_v2_chr12_+_24651346_24651409	0.404587	Zic4	ENSMUST00000020982.5|Klf11|ENSMUSG00000020653.5|Kruppel-like factor 11
mm10_v2_chrY_+_897782_897800	0.394948	Zic4	ENSMUST00000055032.7|Kdm5d|ENSMUSG00000056673.8|lysine (K)-specific demethylase 5D
mm10_v2_chr5_-_72974702_72974702	0.387394	Zic4	ENSMUST00000043711.8|Gm10135|ENSMUSG00000063656.6|predicted gene 10135
mm10_v2_chr3_-_110142996_110143010	0.386499	Zic4	ENSMUST00000156177.2|Ntng1|ENSMUSG00000059857.9|netrin G1
mm10_v2_chr18_-_80713062_80713080	0.383505	Zic4	ENSMUST00000170905.1|Nfatc1|ENSMUSG00000033016.9|nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 1 	ENSMUST00000078049.4|Nfatc1|ENSMUSG00000033016.9|nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 1
mm10_v2_chr2_-_29253001_29253013	0.381162	Zic4	ENSMUST00000071201.4|Ntng2|ENSMUSG00000035513.13|netrin G2
mm10_v2_chr4_+_130792513_130792667	0.376155	Zic4	ENSMUST00000070478.3|Sdc3|ENSMUSG00000025743.8|syndecan 3
mm10_v2_chr11_+_5861886_5861966	0.370232	Zic4	ENSMUST00000102923.3|Aebp1|ENSMUSG00000020473.7|AE binding protein 1
mm10_v2_chr6_-_115251839_115251867	0.366863	Zic4	ENSMUST00000032462.6|Timp4|ENSMUSG00000030317.6|tissue inhibitor of metalloproteinase 4
mm10_v2_chr19_+_5447692_5447711	0.365461	Zic4	ENSMUST00000025850.5|Fosl1|ENSMUSG00000024912.5|fos-like antigen 1
mm10_v2_chr5_-_113310729_113310788	0.342638	Zic4	ENSMUST00000112325.1|Sgsm1|ENSMUSG00000042216.7|small G protein signaling modulator 1 	ENSMUST00000048112.6|Sgsm1|ENSMUSG00000042216.7|small G protein signaling modulator 1
mm10_v2_chr2_+_120977017_120977107	0.329843	Zic4	ENSMUST00000067582.7|Tmem62|ENSMUSG00000054484.8|transmembrane protein 62
mm10_v2_chr2_-_167062981_167063048	0.319847	Zic4	ENSMUST00000048988.7|Znfx1|ENSMUSG00000039501.8|zinc finger, NFX1-type containing 1
mm10_v2_chr7_+_28766747_28766822	0.316251	Zic4	ENSMUST00000170068.1|Sirt2|ENSMUSG00000015149.7|sirtuin 2 	ENSMUST00000072965.4|Sirt2|ENSMUSG00000015149.7|sirtuin 2
mm10_v2_chr17_+_79051906_79051906	0.315039	Zic4	ENSMUST00000040789.4|Qpct|ENSMUSG00000024084.7|glutaminyl-peptide cyclotransferase (glutaminyl cyclase)
mm10_v2_chr7_-_57387172_57387222	0.313228	Zic4	ENSMUST00000068911.6|Gabrg3|ENSMUSG00000055026.7|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 3
mm10_v2_chr12_-_67222549_67222578	0.309427	Zic4	ENSMUST00000037181.8|Mdga2|ENSMUSG00000034912.10|MAM domain containing glycosylphosphatidylinositol anchor 2
mm10_v2_chr5_-_113310697_113310727	0.302173	Zic4	ENSMUST00000154248.1|Sgsm1|ENSMUSG00000042216.7|small G protein signaling modulator 1
mm10_v2_chr15_+_99224976_99224976	0.301399	Zic4	ENSMUST00000041415.3|Kcnh3|ENSMUSG00000037579.6|potassium voltage-gated channel, subfamily H (eag-related), member 3
mm10_v2_chr3_+_103914560_103914605	0.295112	Zic4	ENSMUST00000106806.1|Rsbn1|ENSMUSG00000044098.8|rosbin, round spermatid basic protein 1
mm10_v2_chrX_+_71364901_71364937	0.294813	Zic4	ENSMUST00000132837.1|Mtmr1|ENSMUSG00000015214.8|myotubularin related protein 1
mm10_v2_chr7_+_139834148_139834174	0.292974	Zic4	ENSMUST00000026548.7|Gpr123|ENSMUSG00000025475.11|G protein-coupled receptor 123
mm10_v2_chr13_-_48625571_48625594	0.291765	Zic4	ENSMUST00000035824.9|Ptpdc1|ENSMUSG00000038042.9|protein tyrosine phosphatase domain containing 1
mm10_v2_chr4_-_133602168_133602168	0.289717	Zic4	ENSMUST00000057311.3|Sfn|ENSMUSG00000047281.3|stratifin
mm10_v2_chr2_+_131909951_131909979	0.289493	Zic4	ENSMUST00000124100.1|PRND|ENSMUSG00000098754.1|prion protein gene complex (Prn), transcript variant 1, mRNA 	ENSMUST00000136783.1|PRND|ENSMUSG00000098754.1|prion protein gene complex (Prn), transcript variant 1, mRNA
mm10_v2_chr7_+_28458658_28458658	0.287972	Zic4	ENSMUST00000108288.3|Lrfn1|ENSMUSG00000030600.9|leucine rich repeat and fibronectin type III domain containing 1 	ENSMUST00000055110.9|Lrfn1|ENSMUSG00000030600.9|leucine rich repeat and fibronectin type III domain containing 1
mm10_v2_chrX_-_74085586_74085652	0.280076	Zic4	ENSMUST00000123362.1|Mecp2|ENSMUSG00000031393.10|methyl CpG binding protein 2 	ENSMUST00000140399.1|Mecp2|ENSMUSG00000031393.10|methyl CpG binding protein 2 	ENSMUST00000100750.3|Mecp2|ENSMUSG00000031393.10|methyl CpG binding protein 2
mm10_v2_chr17_+_37045980_37046080	0.274759	Zic4	ENSMUST00000174456.1|Gabbr1|ENSMUSG00000024462.11|gamma-aminobutyric acid (GABA) B receptor, 1
mm10_v2_chrX_-_7740206_7740218	0.263952	Zic4	ENSMUST00000128289.1|Ccdc120|ENSMUSG00000031150.6|coiled-coil domain containing 120
mm10_v2_chr2_-_130642770_130642811	0.261337	Zic4	ENSMUST00000045761.6|Lzts3|ENSMUSG00000037703.8|leucine zipper, putative tumor suppressor family member 3
mm10_v2_chr11_+_121702591_121702763	0.24963	Zic4	ENSMUST00000125580.1|Metrnl|ENSMUSG00000039208.9|meteorin, glial cell differentiation regulator-like
mm10_v2_chr8_-_83166170_83166170	0.248649	Zic4	ENSMUST00000098605.2|Gm10645|ENSMUSG00000074228.2|predicted gene 10645
mm10_v2_chr7_+_97579868_97579901	0.247514	Zic4	ENSMUST00000042399.7|Rsf1|ENSMUSG00000035623.8|remodeling and spacing factor 1 	ENSMUST00000107153.1|Rsf1|ENSMUSG00000035623.8|remodeling and spacing factor 1
mm10_v2_chr14_+_54640952_54640952	0.24425	Zic4	ENSMUST00000169818.2|Gm17606|ENSMUSG00000091306.2|predicted gene, 17606
mm10_v2_chr5_+_4192367_4192367	0.237969	Zic4	ENSMUST00000177258.1|Gm9897|ENSMUSG00000053178.5|predicted gene 9897
mm10_v2_chr9_+_46012822_46013000	0.236567	Zic4	ENSMUST00000120463.2|Sik3|ENSMUSG00000034135.8|SIK family kinase 3 	ENSMUST00000120247.1|Sik3|ENSMUSG00000034135.8|SIK family kinase 3
mm10_v2_chr16_+_20733104_20733158	0.232484	Zic4	ENSMUST00000115423.1|Chrd|ENSMUSG00000006958.7|chordin 	ENSMUST00000007171.6|Chrd|ENSMUSG00000006958.7|chordin
mm10_v2_chr19_+_41482632_41482688	0.231855	Zic4	ENSMUST00000067795.5|Lcor|ENSMUSG00000025019.9|ligand dependent nuclear receptor corepressor
mm10_v2_chr11_-_6475992_6476102	0.230121	Zic4	ENSMUST00000179343.1|Purb|ENSMUSG00000094483.1|purine rich element binding protein B
mm10_v2_chr11_-_78497458_78497539	0.22724	Zic4	ENSMUST00000108287.3|Sarm1|ENSMUSG00000050132.7|sterile alpha and HEAT/Armadillo motif containing 1
mm10_v2_chr8_-_64849818_64849861	0.226624	Zic4	ENSMUST00000034017.7|Klhl2|ENSMUSG00000031605.7|kelch-like 2, Mayven
mm10_v2_chr2_+_112265809_112265858	0.225869	Zic4	ENSMUST00000110991.2|Slc12a6|ENSMUSG00000027130.9|solute carrier family 12, member 6
mm10_v2_chr7_+_27653906_27653960	0.222312	Zic4	ENSMUST00000008088.7|Ttc9b|ENSMUSG00000007944.7|tetratricopeptide repeat domain 9B
mm10_v2_chr7_+_27591513_27591562	0.222209	Zic4	ENSMUST00000108344.2|Akt2|ENSMUSG00000004056.9|thymoma viral proto-oncogene 2
mm10_v2_chr5_-_20882072_20882124	0.221743	Zic4	ENSMUST00000118174.1|Phtf2|ENSMUSG00000039987.9|putative homeodomain transcription factor 2
mm10_v2_chr2_-_161109017_161109027	0.215119	Zic4	ENSMUST00000039782.7|Chd6|ENSMUSG00000057133.8|chromodomain helicase DNA binding protein 6 	ENSMUST00000134178.1|Chd6|ENSMUSG00000057133.8|chromodomain helicase DNA binding protein 6
mm10_v2_chr3_+_97658212_97658339	0.213575	Zic4	ENSMUST00000045743.6|Prkab2|ENSMUSG00000038205.6|protein kinase, AMP-activated, beta 2 non-catalytic subunit
mm10_v2_chr4_+_117096049_117096083	0.20619	Zic4	ENSMUST00000030443.5|Ptch2|ENSMUSG00000028681.5|patched homolog 2
mm10_v2_chr13_-_58610877_58610905	0.202391	Zic4	ENSMUST00000022036.7|Slc28a3|ENSMUSG00000021553.7|solute carrier family 28 (sodium-coupled nucleoside transporter), member 3
mm10_v2_chr4_-_156197479_156197496	0.201605	Zic4	ENSMUST00000075787.6|Agrn|ENSMUSG00000041936.12|agrin 	ENSMUST00000180572.1|Agrn|ENSMUSG00000041936.12|agrin
mm10_v2_chr3_+_61002786_61002811	0.200862	Zic4	ENSMUST00000029331.1|P2ry1|ENSMUSG00000027765.1|purinergic receptor P2Y, G-protein coupled 1
mm10_v2_chr14_-_54913089_54913132	0.199646	Zic4	ENSMUST00000050772.7|Slc22a17|ENSMUSG00000022199.10|solute carrier family 22 (organic cation transporter), member 17
mm10_v2_chr7_+_27591705_27591778	0.193086	Zic4	ENSMUST00000167435.1|Akt2|ENSMUSG00000004056.9|thymoma viral proto-oncogene 2
mm10_v2_chr3_-_20035285_20035325	0.188417	Zic4	ENSMUST00000108321.1|Hps3|ENSMUSG00000027615.8|Hermansky-Pudlak syndrome 3 homolog (human) 	ENSMUST00000012580.6|Hps3|ENSMUSG00000027615.8|Hermansky-Pudlak syndrome 3 homolog (human)
mm10_v2_chr1_+_91179822_91179822	0.185487	Zic4	ENSMUST00000097648.4|Ramp1|ENSMUSG00000034353.8|receptor (calcitonin) activity modifying protein 1 	ENSMUST00000165855.1|Ramp1|ENSMUSG00000034353.8|receptor (calcitonin) activity modifying protein 1
mm10_v2_chrX_+_71364745_71364794	0.185247	Zic4	ENSMUST00000114601.1|Mtmr1|ENSMUSG00000015214.8|myotubularin related protein 1 	ENSMUST00000146213.1|Mtmr1|ENSMUSG00000015214.8|myotubularin related protein 1 	ENSMUST00000015358.1|Mtmr1|ENSMUSG00000015214.8|myotubularin related protein 1
mm10_v2_chr2_+_131909928_131909948	0.184701	Zic4	ENSMUST00000091288.6|Prnp|ENSMUSG00000079037.3|prion protein
mm10_v2_chr19_+_3767953_3768033	0.179939	Zic4	ENSMUST00000113970.1|Suv420h1|ENSMUSG00000045098.12|suppressor of variegation 4-20 homolog 1 (Drosophila)
mm10_v2_chr4_-_62360524_62360552	0.179892	Zic4	ENSMUST00000107461.1|Fkbp15|ENSMUSG00000066151.5|FK506 binding protein 15 	ENSMUST00000084528.3|Fkbp15|ENSMUSG00000066151.5|FK506 binding protein 15
mm10_v2_chr7_-_98119482_98119524	0.172571	Zic4	ENSMUST00000138627.1|Myo7a|ENSMUSG00000030761.9|myosin VIIA 	ENSMUST00000107127.1|Myo7a|ENSMUSG00000030761.9|myosin VIIA 	ENSMUST00000107128.1|Myo7a|ENSMUSG00000030761.9|myosin VIIA
mm10_v2_chr6_+_47877204_47877204	0.172461	Zic4	ENSMUST00000061890.7|Zfp282|ENSMUSG00000025821.9|zinc finger protein 282
mm10_v2_chr9_-_43105718_43105793	0.169988	Zic4	ENSMUST00000165665.1|Arhgef12|ENSMUSG00000059495.7|Rho guanine nucleotide exchange factor (GEF) 12
mm10_v2_chr2_+_164879358_164879398	0.164766	Zic4	ENSMUST00000041643.3|Pcif1|ENSMUSG00000039849.5|PDX1 C-terminal inhibiting factor 1
mm10_v2_chr17_-_57059795_57059863	0.164347	Zic4	ENSMUST00000040280.7|Slc25a23|ENSMUSG00000046329.8|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 23
mm10_v2_chr10_-_62792243_62792368	0.16176	Zic4	ENSMUST00000020268.5|Ccar1|ENSMUSG00000020074.6|cell division cycle and apoptosis regulator 1
mm10_v2_chr11_-_78497734_78497793	0.159375	Zic4	ENSMUST00000061174.6|Sarm1|ENSMUSG00000050132.7|sterile alpha and HEAT/Armadillo motif containing 1
mm10_v2_chr6_-_83054415_83054571	0.157696	Zic4	ENSMUST00000113962.1|Htra2|ENSMUSG00000068329.6|HtrA serine peptidase 2 	ENSMUST00000089645.6|Htra2|ENSMUSG00000068329.6|HtrA serine peptidase 2 	ENSMUST00000113963.1|Htra2|ENSMUSG00000068329.6|HtrA serine peptidase 2
mm10_v2_chr6_-_35308110_35308136	0.15763	Zic4	ENSMUST00000031868.4|Slc13a4|ENSMUSG00000029843.4|solute carrier family 13 (sodium/sulfate symporters), member 4
mm10_v2_chr19_-_12501996_12502152	0.155837	Zic4	ENSMUST00000045521.7|Dtx4|ENSMUSG00000039982.7|deltex 4 homolog (Drosophila)
mm10_v2_chr4_-_62360436_62360511	0.15539	Zic4	ENSMUST00000084527.3|Fkbp15|ENSMUSG00000066151.5|FK506 binding protein 15 	ENSMUST00000098033.3|Fkbp15|ENSMUSG00000066151.5|FK506 binding protein 15
mm10_v2_chr9_-_105495037_105495117	0.154957	Zic4	ENSMUST00000176190.1|Atp2c1|ENSMUSG00000032570.10|ATPase, Ca++-sequestering 	ENSMUST00000163879.2|Atp2c1|ENSMUSG00000032570.10|ATPase, Ca++-sequestering 	ENSMUST00000112558.2|Atp2c1|ENSMUSG00000032570.10|ATPase, Ca++-sequestering 	ENSMUST00000176390.1|Atp2c1|ENSMUSG00000032570.10|ATPase, Ca++-sequestering
mm10_v2_chr7_+_45570342_45570373	0.143677	Zic4	ENSMUST00000120864.1|Bcat2|ENSMUSG00000030826.11|branched chain aminotransferase 2, mitochondrial
mm10_v2_chr2_+_32151074_32151262	0.139695	Zic4	ENSMUST00000036691.7|Prrc2b|ENSMUSG00000039262.10|proline-rich coiled-coil 2B 	ENSMUST00000069817.8|Prrc2b|ENSMUSG00000039262.10|proline-rich coiled-coil 2B
mm10_v2_chr4_+_42158092_42158092	0.135396	Zic4	ENSMUST00000098122.2|Gm13306|ENSMUSG00000073877.4|predicted gene 13306
mm10_v2_chr2_+_91922178_91922194	0.132035	Zic4	ENSMUST00000170432.1|Chrm4|ENSMUSG00000040495.3|cholinergic receptor, muscarinic 4
mm10_v2_chr16_+_14361552_14361601	0.129412	Zic4	ENSMUST00000100167.3|Abcc1|ENSMUSG00000023088.10|ATP-binding cassette, sub-family C (CFTR/MRP), member 1 	ENSMUST00000154748.1|Abcc1|ENSMUSG00000023088.10|ATP-binding cassette, sub-family C (CFTR/MRP), member 1 	ENSMUST00000134776.1|Abcc1|ENSMUSG00000023088.10|ATP-binding cassette, sub-family C (CFTR/MRP), member 1
mm10_v2_chr3_-_95015416_95015462	0.128892	Zic4	ENSMUST00000132195.1|Zfp687|ENSMUSG00000019338.7|zinc finger protein 687
mm10_v2_chr1_-_12991109_12991177	0.127886	Zic4	ENSMUST00000115403.2|Slco5a1|ENSMUSG00000025938.10|solute carrier organic anion transporter family, member 5A1 	ENSMUST00000115402.1|Slco5a1|ENSMUSG00000025938.10|solute carrier organic anion transporter family, member 5A1
mm10_v2_chr16_-_30388530_30388530	0.127542	Zic4	ENSMUST00000100013.2|Atp13a3|ENSMUSG00000022533.7|ATPase type 13A3 	ENSMUST00000061350.6|Atp13a3|ENSMUSG00000022533.7|ATPase type 13A3
mm10_v2_chr17_-_45549655_45549677	0.123454	Zic4	ENSMUST00000180252.1|Tmem151b|ENSMUSG00000096847.1|transmembrane protein 151B
mm10_v2_chr5_-_142509653_142509664	0.119406	Zic4	ENSMUST00000110784.1|Radil|ENSMUSG00000029576.11|Ras association and DIL domains
mm10_v2_chr9_-_105495130_105495146	0.116307	Zic4	ENSMUST00000038118.7|Atp2c1|ENSMUSG00000032570.10|ATPase, Ca++-sequestering
mm10_v2_chr10_+_127380591_127380702	0.110528	Zic4	ENSMUST00000166820.1|R3hdm2|ENSMUSG00000025404.9|R3H domain containing 2
mm10_v2_chr18_-_77565050_77565162	0.109425	Zic4	ENSMUST00000182153.1|Rnf165|ENSMUSG00000025427.8|ring finger protein 165 	ENSMUST00000182146.1|Rnf165|ENSMUSG00000025427.8|ring finger protein 165 	ENSMUST00000026494.7|Rnf165|ENSMUSG00000025427.8|ring finger protein 165 	ENSMUST00000182024.1|Rnf165|ENSMUSG00000025427.8|ring finger protein 165
mm10_v2_chr5_+_43233463_43233491	0.109005	Zic4	ENSMUST00000169035.1|Cpeb2|ENSMUSG00000039782.8|cytoplasmic polyadenylation element binding protein 2 	ENSMUST00000166713.1|Cpeb2|ENSMUSG00000039782.8|cytoplasmic polyadenylation element binding protein 2
mm10_v2_chr9_+_46012810_46012821	0.103399	Zic4	ENSMUST00000126865.1|Sik3|ENSMUSG00000034135.8|SIK family kinase 3
mm10_v2_chr8_+_107031218_107031229	0.103104	Zic4	ENSMUST00000034388.9|Vps4a|ENSMUSG00000031913.9|vacuolar protein sorting 4a (yeast)
mm10_v2_chr7_-_100932140_100932200	0.0979121	Zic4	ENSMUST00000107032.1|Arhgef17|ENSMUSG00000032875.7|Rho guanine nucleotide exchange factor (GEF) 17
mm10_v2_chr11_-_71033462_71033513	0.0978373	Zic4	ENSMUST00000156068.2|6330403K07Rik|ENSMUSG00000018451.6|RIKEN cDNA 6330403K07 gene
mm10_v2_chr12_-_102704896_102704980	0.0974102	Zic4	ENSMUST00000178697.1|Itpk1|ENSMUSG00000057963.3|inositol 1,3,4-triphosphate 5/6 kinase 	ENSMUST00000046518.5|Itpk1|ENSMUSG00000057963.3|inositol 1,3,4-triphosphate 5/6 kinase
mm10_v2_chr18_-_24603464_24603530	0.0972711	Zic4	ENSMUST00000154205.1|Slc39a6|ENSMUSG00000024270.5|solute carrier family 39 (metal ion transporter), member 6
mm10_v2_chr10_+_127380799_127380878	0.0936853	Zic4	ENSMUST00000111628.2|R3hdm2|ENSMUSG00000025404.9|R3H domain containing 2
mm10_v2_chr17_+_83706170_83706200	0.0931947	Zic4	ENSMUST00000067826.8|Mta3|ENSMUSG00000055817.11|metastasis associated 3
mm10_v2_chr17_-_26508463_26508519	0.084721	Zic4	ENSMUST00000025025.6|Dusp1|ENSMUSG00000024190.6|dual specificity phosphatase 1
mm10_v2_chr12_-_31499541_31499616	0.0833709	Zic4	ENSMUST00000101499.3|Cbll1|ENSMUSG00000020659.9|Casitas B-lineage lymphoma-like 1 	ENSMUST00000064240.6|Cbll1|ENSMUSG00000020659.9|Casitas B-lineage lymphoma-like 1 	ENSMUST00000085487.5|Cbll1|ENSMUSG00000020659.9|Casitas B-lineage lymphoma-like 1
mm10_v2_chr17_+_24669730_24669752	0.0829421	Zic4	ENSMUST00000047179.5|Zfp598|ENSMUSG00000041130.9|zinc finger protein 598
mm10_v2_chr18_-_24603791_24603843	0.0782678	Zic4	ENSMUST00000070726.3|Slc39a6|ENSMUSG00000024270.5|solute carrier family 39 (metal ion transporter), member 6
mm10_v2_chr17_-_45595502_45595602	0.0773173	Zic4	ENSMUST00000171081.1|Slc29a1|ENSMUSG00000023942.9|solute carrier family 29 (nucleoside transporters), member 1 	ENSMUST00000172301.1|Slc29a1|ENSMUSG00000023942.9|solute carrier family 29 (nucleoside transporters), member 1 	ENSMUST00000167332.1|Slc29a1|ENSMUSG00000023942.9|solute carrier family 29 (nucleoside transporters), member 1 	ENSMUST00000170488.1|Slc29a1|ENSMUSG00000023942.9|solute carrier family 29 (nucleoside transporters), member 1 	ENSMUST00000167195.1|Slc29a1|ENSMUSG00000023942.9|solute carrier family 29 (nucleoside transporters), member 1 	ENSMUST00000064889.6|Slc29a1|ENSMUSG00000023942.9|solute carrier family 29 (nucleoside transporters), member 1 	ENSMUST00000051574.6|Slc29a1|ENSMUSG00000023942.9|solute carrier family 29 (nucleoside transporters), member 1 	ENSMUST00000164217.1|Slc29a1|ENSMUSG00000023942.9|solute carrier family 29 (nucleoside transporters), member 1
mm10_v2_chr1_+_87853264_87853306	0.0753564	Zic4	ENSMUST00000027517.7|Dgkd|ENSMUSG00000070738.4|diacylglycerol kinase, delta
mm10_v2_chr2_+_156065738_156065760	0.0742949	Zic4	ENSMUST00000137966.1|Spag4|ENSMUSG00000038180.5|sperm associated antigen 4
mm10_v2_chr17_-_45593626_45593656	0.0734259	Zic4	ENSMUST00000163905.1|Slc29a1|ENSMUSG00000023942.9|solute carrier family 29 (nucleoside transporters), member 1 	ENSMUST00000167692.1|Slc29a1|ENSMUSG00000023942.9|solute carrier family 29 (nucleoside transporters), member 1
mm10_v2_chr7_-_126503408_126503477	0.0688062	Zic4	ENSMUST00000040202.8|Atxn2l|ENSMUSG00000032637.9|ataxin 2-like
mm10_v2_chr16_+_35983424_35983582	0.0646163	Zic4	ENSMUST00000173555.1|Kpna1|ENSMUSG00000022905.6|karyopherin (importin) alpha 1
mm10_v2_chr9_-_58555129_58555143	0.0631625	Zic4	ENSMUST00000165365.1|Cd276|ENSMUSG00000035914.4|CD276 antigen
mm10_v2_chr13_-_37994111_37994190	0.0624722	Zic4	ENSMUST00000021864.6|Ssr1|ENSMUSG00000021427.9|signal sequence receptor, alpha
mm10_v2_chr9_+_108460518_108460571	0.0606515	Zic4	ENSMUST00000061209.5|Ccdc71|ENSMUSG00000049305.5|coiled-coil domain containing 71
mm10_v2_chr2_+_156065180_156065282	0.0569885	Zic4	ENSMUST00000038860.5|Spag4|ENSMUSG00000038180.5|sperm associated antigen 4
mm10_v2_chr8_+_72240315_72240346	0.0550121	Zic4	ENSMUST00000126885.1|Ap1m1|ENSMUSG00000003033.8|adaptor-related protein complex AP-1, mu subunit 1
mm10_v2_chrX_-_10216918_10216921	0.0538034	Zic4	ENSMUST00000072393.2|Rpgr|ENSMUSG00000031174.11|retinitis pigmentosa GTPase regulator 	ENSMUST00000044598.6|Rpgr|ENSMUSG00000031174.11|retinitis pigmentosa GTPase regulator 	ENSMUST00000073392.4|Rpgr|ENSMUSG00000031174.11|retinitis pigmentosa GTPase regulator 	ENSMUST00000115533.1|Rpgr|ENSMUSG00000031174.11|retinitis pigmentosa GTPase regulator 	ENSMUST00000115532.1|Rpgr|ENSMUSG00000031174.11|retinitis pigmentosa GTPase regulator
mm10_v2_chr7_+_127800844_127800941	0.0528315	Zic4	ENSMUST00000106271.1|Hsd3b7|ENSMUSG00000042289.5|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7 	ENSMUST00000138432.1|Hsd3b7|ENSMUSG00000042289.5|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7
mm10_v2_chr7_-_97579382_97579501	0.0489723	Zic4	ENSMUST00000151840.1|Aamdc|ENSMUSG00000035642.10|adipogenesis associated Mth938 domain containing 	ENSMUST00000135998.1|Aamdc|ENSMUSG00000035642.10|adipogenesis associated Mth938 domain containing 	ENSMUST00000144858.1|Aamdc|ENSMUSG00000035642.10|adipogenesis associated Mth938 domain containing 	ENSMUST00000146605.1|Aamdc|ENSMUSG00000035642.10|adipogenesis associated Mth938 domain containing 	ENSMUST00000072725.5|Aamdc|ENSMUSG00000035642.10|adipogenesis associated Mth938 domain containing 	ENSMUST00000138060.1|Aamdc|ENSMUSG00000035642.10|adipogenesis associated Mth938 domain containing 	ENSMUST00000154853.1|Aamdc|ENSMUSG00000035642.10|adipogenesis associated Mth938 domain containing 	ENSMUST00000136757.1|Aamdc|ENSMUSG00000035642.10|adipogenesis associated Mth938 domain containing 	ENSMUST00000124552.1|Aamdc|ENSMUSG00000035642.10|adipogenesis associated Mth938 domain containing
mm10_v2_chr12_-_56535047_56535106	0.0456525	Zic4	ENSMUST00000178477.2|Nkx2-1|ENSMUSG00000001496.9|NK2 homeobox 1
mm10_v2_chr7_-_25297866_25297958	0.0452459	Zic4	ENSMUST00000148150.1|Pafah1b3|ENSMUSG00000005447.6|platelet-activating factor acetylhydrolase, isoform 1b, subunit 3 	ENSMUST00000155118.1|Pafah1b3|ENSMUSG00000005447.6|platelet-activating factor acetylhydrolase, isoform 1b, subunit 3
mm10_v2_chr9_+_58554799_58554799	0.0377495	Zic4	ENSMUST00000098676.2|Gm10657|ENSMUSG00000074273.2|predicted gene 10657
mm10_v2_chr6_+_99692679_99692679	0.0368215	Zic4	ENSMUST00000101122.1|Gpr27|ENSMUSG00000072875.1|G protein-coupled receptor 27
mm10_v2_chr18_+_52767994_52768149	0.0339844	Zic4	ENSMUST00000025413.7|Sncaip|ENSMUSG00000024534.9|synuclein, alpha interacting protein (synphilin) 	ENSMUST00000163742.2|Sncaip|ENSMUSG00000024534.9|synuclein, alpha interacting protein (synphilin) 	ENSMUST00000178011.1|Sncaip|ENSMUSG00000024534.9|synuclein, alpha interacting protein (synphilin)
mm10_v2_chr15_-_97831460_97831519	0.0311613	Zic4	ENSMUST00000079838.7|Hdac7|ENSMUSG00000022475.12|histone deacetylase 7 	ENSMUST00000118294.1|Hdac7|ENSMUSG00000022475.12|histone deacetylase 7
mm10_v2_chr17_-_29347902_29347940	0.0233026	Zic4	ENSMUST00000095427.4|Mtch1|ENSMUSG00000024012.11|mitochondrial carrier homolog 1 (C. elegans) 	ENSMUST00000118366.1|Mtch1|ENSMUSG00000024012.11|mitochondrial carrier homolog 1 (C. elegans)
mm10_v2_chr7_+_127800604_127800696	0.0227878	Zic4	ENSMUST00000046863.5|Hsd3b7|ENSMUSG00000042289.5|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7 	ENSMUST00000106272.1|Hsd3b7|ENSMUSG00000042289.5|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7 	ENSMUST00000139068.1|Hsd3b7|ENSMUSG00000042289.5|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7
mm10_v2_chr6_-_148831395_148831426	0.0203575	Zic4	ENSMUST00000145960.1|Ipo8|ENSMUSG00000040029.8|importin 8
mm10_v2_chr14_-_29721835_29721886	0.019527	Zic4	ENSMUST00000022567.7|Cacna2d3|ENSMUSG00000021991.7|calcium channel, voltage-dependent, alpha2/delta subunit 3
mm10_v2_chr14_+_69767470_69767526	0.0167273	Zic4	ENSMUST00000022663.5|Tnfrsf10b|ENSMUSG00000022074.5|tumor necrosis factor receptor superfamily, member 10b
mm10_v2_chr11_-_102946688_102946725	0.0166659	Zic4	ENSMUST00000057849.5|C1ql1|ENSMUSG00000045532.5|complement component 1, q subcomponent-like 1
mm10_v2_chr12_-_12941827_12941914	0.0160087	Zic4	ENSMUST00000043396.7|Mycn|ENSMUSG00000037169.8|v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian)
mm10_v2_chr2_-_73775341_73775378	0.0122681	Zic4	ENSMUST00000112024.3|Chn1|ENSMUSG00000056486.11|chimerin (chimaerin) 1 	ENSMUST00000166199.1|Chn1|ENSMUSG00000056486.11|chimerin (chimaerin) 1 	ENSMUST00000180045.1|Chn1|ENSMUSG00000056486.11|chimerin (chimaerin) 1
mm10_v2_chr11_+_75733037_75733148	0.00160681	Zic4	ENSMUST00000131398.1|Ywhae|ENSMUSG00000020849.7|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide
