mm10_v2_chr5_+_139543889_139543904	4.62946	En2	ENSMUST00000174792.1|Uncx|ENSMUSG00000029546.11|UNC homeobox 	ENSMUST00000031523.8|Uncx|ENSMUSG00000029546.11|UNC homeobox
mm10_v2_chrX_-_60893430_60893440	3.55548	En2	ENSMUST00000135107.2|Sox3|ENSMUSG00000045179.8|SRY-box containing gene 3
mm10_v2_chr5_-_53707532_53707704	3.39548	En2	ENSMUST00000031093.3|Cckar|ENSMUSG00000029193.4|cholecystokinin A receptor
mm10_v2_chr6_+_8948608_8948619	2.97281	En2	ENSMUST00000160300.1|Nxph1|ENSMUSG00000046178.3|neurexophilin 1
mm10_v2_chr13_-_114458720_114458736	2.51563	En2	ENSMUST00000022287.5|Fst|ENSMUSG00000021765.7|follistatin
mm10_v2_chr6_+_4755327_4755357	2.42839	En2	ENSMUST00000176551.1|Peg10|ENSMUSG00000092035.2|paternally expressed 10
mm10_v2_chr2_+_25372315_25372368	2.3839	En2	ENSMUST00000028329.6|Sapcd2|ENSMUSG00000026955.7|suppressor APC domain containing 2 	ENSMUST00000114293.2|Sapcd2|ENSMUSG00000026955.7|suppressor APC domain containing 2 	ENSMUST00000100323.2|Sapcd2|ENSMUSG00000026955.7|suppressor APC domain containing 2
mm10_v2_chr5_+_33658123_33658160	2.22611	En2	ENSMUST00000074849.6|Tacc3|ENSMUSG00000037313.10|transforming, acidic coiled-coil containing protein 3 	ENSMUST00000079534.4|Tacc3|ENSMUSG00000037313.10|transforming, acidic coiled-coil containing protein 3
mm10_v2_chr12_+_109545390_109545443	2.14181	En2	ENSMUST00000146701.1|Meg3|ENSMUSG00000021268.11|maternally expressed 3
mm10_v2_chr2_-_72986716_72986716	1.94996	En2	ENSMUST00000112062.1|Gm11084|ENSMUSG00000079286.1|predicted gene 11084
mm10_v2_chr14_-_67715585_67715681	1.92555	En2	ENSMUST00000163100.1|Cdca2|ENSMUSG00000048922.12|cell division cycle associated 2 	ENSMUST00000132705.1|Cdca2|ENSMUSG00000048922.12|cell division cycle associated 2 	ENSMUST00000124045.1|Cdca2|ENSMUSG00000048922.12|cell division cycle associated 2
mm10_v2_chr6_+_146888481_146888589	1.8737	En2	ENSMUST00000016631.7|Ppfibp1|ENSMUSG00000016487.9|PTPRF interacting protein, binding protein 1 (liprin beta 1) 	ENSMUST00000111623.2|Ppfibp1|ENSMUSG00000016487.9|PTPRF interacting protein, binding protein 1 (liprin beta 1)
mm10_v2_chr8_+_83955507_83955507	1.73409	En2	ENSMUST00000005607.8|Asf1b|ENSMUSG00000005470.8|ASF1 anti-silencing function 1 homolog B (S. cerevisiae)
mm10_v2_chr3_-_27153861_27153878	1.72109	En2	ENSMUST00000108300.1|Ect2|ENSMUSG00000027699.13|ect2 oncogene 	ENSMUST00000108298.2|Ect2|ENSMUSG00000027699.13|ect2 oncogene
mm10_v2_chr18_-_80986578_80986578	1.68981	En2	ENSMUST00000057950.7|Sall3|ENSMUSG00000024565.8|sal-like 3 (Drosophila)
mm10_v2_chr5_+_33658567_33658616	1.68841	En2	ENSMUST00000114426.3|Tacc3|ENSMUSG00000037313.10|transforming, acidic coiled-coil containing protein 3
mm10_v2_chr3_-_27153844_27153855	1.61623	En2	ENSMUST00000176242.2|Ect2|ENSMUSG00000027699.13|ect2 oncogene 	ENSMUST00000176780.1|Ect2|ENSMUSG00000027699.13|ect2 oncogene
mm10_v2_chr4_+_62583568_62583601	1.58948	En2	ENSMUST00000098031.3|Rgs3|ENSMUSG00000059810.12|regulator of G-protein signaling 3
mm10_v2_chr2_+_20737306_20737321	1.55977	En2	ENSMUST00000114606.1|Etl4|ENSMUSG00000036617.10|enhancer trap locus 4 	ENSMUST00000114608.1|Etl4|ENSMUSG00000036617.10|enhancer trap locus 4
mm10_v2_chr3_+_134236483_134236500	1.49935	En2	ENSMUST00000181904.1|Cxxc4|ENSMUSG00000044365.10|CXXC finger 4 	ENSMUST00000053048.9|Cxxc4|ENSMUSG00000044365.10|CXXC finger 4
mm10_v2_chr9_+_65890237_65890343	1.40427	En2	ENSMUST00000045802.6|2810417H13Rik|ENSMUSG00000040204.6|RIKEN cDNA 2810417H13 gene
mm10_v2_chr13_-_47106176_47106206	1.36414	En2	ENSMUST00000021807.6|Dek|ENSMUSG00000021377.8|DEK oncogene (DNA binding) 	ENSMUST00000135278.1|Dek|ENSMUSG00000021377.8|DEK oncogene (DNA binding)
mm10_v2_chr8_-_90908415_90908415	1.33783	En2	ENSMUST00000098517.1|Gm6658|ENSMUSG00000074171.1|predicted gene 6658
mm10_v2_chr3_-_116253467_116253484	1.33029	En2	ENSMUST00000090473.5|Gpr88|ENSMUSG00000068696.5|G-protein coupled receptor 88
mm10_v2_chr5_+_33658550_33658563	1.31895	En2	ENSMUST00000152847.1|Tacc3|ENSMUSG00000037313.10|transforming, acidic coiled-coil containing protein 3
mm10_v2_chr13_+_23544052_23544052	1.30899	En2	ENSMUST00000075558.2|Hist1h3f|ENSMUSG00000059309.2|histone cluster 1, H3f
mm10_v2_chr2_-_57114970_57115038	1.28237	En2	ENSMUST00000028166.2|Nr4a2|ENSMUSG00000026826.7|nuclear receptor subfamily 4, group A, member 2
mm10_v2_chr6_-_50456085_50456174	1.24454	En2	ENSMUST00000146341.1|Osbpl3|ENSMUSG00000029822.9|oxysterol binding protein-like 3 	ENSMUST00000071728.4|Osbpl3|ENSMUSG00000029822.9|oxysterol binding protein-like 3
mm10_v2_chr4_+_109978004_109978053	1.24165	En2	ENSMUST00000061187.3|Dmrta2|ENSMUSG00000047143.3|doublesex and mab-3 related transcription factor like family A2
mm10_v2_chr8_-_45382198_45382291	1.22799	En2	ENSMUST00000093526.6|Fam149a|ENSMUSG00000070044.9|family with sequence similarity 149, member A
mm10_v2_chr18_+_34625009_34625033	1.22524	En2	ENSMUST00000166044.1|Kif20a|ENSMUSG00000003779.9|kinesin family member 20A
mm10_v2_chr13_+_21717626_21717631	1.2071	En2	ENSMUST00000091754.2|Hist1h3h|ENSMUSG00000069312.2|histone cluster 1, H3h
mm10_v2_chr19_-_15924928_15925059	1.19996	En2	ENSMUST00000025542.3|Psat1|ENSMUSG00000024640.3|phosphoserine aminotransferase 1
mm10_v2_chr17_+_34039437_34039481	1.19213	En2	ENSMUST00000131134.1|Col11a2|ENSMUSG00000024330.10|collagen, type XI, alpha 2 	ENSMUST00000087497.4|Col11a2|ENSMUSG00000024330.10|collagen, type XI, alpha 2 	ENSMUST00000114255.1|Col11a2|ENSMUSG00000024330.10|collagen, type XI, alpha 2 	ENSMUST00000114252.1|Col11a2|ENSMUSG00000024330.10|collagen, type XI, alpha 2
mm10_v2_chr5_-_77115145_77115156	1.15078	En2	ENSMUST00000081964.5|Hopx|ENSMUSG00000059325.8|HOP homeobox
mm10_v2_chr3_+_159839729_159839745	1.14868	En2	ENSMUST00000068952.5|Wls|ENSMUSG00000028173.6|wntless homolog (Drosophila)
mm10_v2_chr11_-_101095367_101095439	1.14634	En2	ENSMUST00000019447.8|Psmc3ip|ENSMUSG00000019303.8|proteasome (prosome, macropain) 26S subunit, ATPase 3, interacting protein
mm10_v2_chr19_-_15924560_15924622	1.12461	En2	ENSMUST00000162053.1|Psat1|ENSMUSG00000024640.3|phosphoserine aminotransferase 1
mm10_v2_chr12_+_38780817_38780854	1.12022	En2	ENSMUST00000160856.1|Etv1|ENSMUSG00000004151.10|ets variant gene 1
mm10_v2_chrX_+_134308084_134308209	1.07115	En2	ENSMUST00000081064.5|Cenpi|ENSMUSG00000031262.6|centromere protein I 	ENSMUST00000101251.1|Cenpi|ENSMUSG00000031262.6|centromere protein I 	ENSMUST00000129782.1|Cenpi|ENSMUSG00000031262.6|centromere protein I
mm10_v2_chr12_+_38780284_38780349	1.05842	En2	ENSMUST00000162563.1|Etv1|ENSMUSG00000004151.10|ets variant gene 1 	ENSMUST00000161164.1|Etv1|ENSMUSG00000004151.10|ets variant gene 1 	ENSMUST00000160996.1|Etv1|ENSMUSG00000004151.10|ets variant gene 1
mm10_v2_chr18_+_34624621_34624629	1.05737	En2	ENSMUST00000167161.1|Kif20a|ENSMUSG00000003779.9|kinesin family member 20A
mm10_v2_chr4_-_129558355_129558378	1.04182	En2	ENSMUST00000167288.1|Lck|ENSMUSG00000000409.8|lymphocyte protein tyrosine kinase 	ENSMUST00000134336.1|Lck|ENSMUSG00000000409.8|lymphocyte protein tyrosine kinase
mm10_v2_chr14_+_67716095_67716151	1.03539	En2	ENSMUST00000078053.6|Kctd9|ENSMUSG00000034327.11|potassium channel tetramerisation domain containing 9 	ENSMUST00000145542.1|Kctd9|ENSMUSG00000034327.11|potassium channel tetramerisation domain containing 9 	ENSMUST00000125212.1|Kctd9|ENSMUSG00000034327.11|potassium channel tetramerisation domain containing 9
mm10_v2_chr10_+_73821857_73821883	1.0122	En2	ENSMUST00000177128.1|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000064562.7|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000129404.2|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000105426.3|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000131321.2|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000126920.2|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000147189.2|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000105424.3|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000092420.6|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000105429.3|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000131724.2|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000152655.2|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000151116.2|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000155701.2|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000152819.2|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000125517.2|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000124046.1|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000149977.2|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000146682.1|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000177107.1|Pcdh15|ENSMUSG00000052613.10|protocadherin 15
mm10_v2_chrM_+_7005_7022	0.991425	En2	ENSMUST00000082405.1|mt-Co2|ENSMUSG00000064354.1|mitochondrially encoded cytochrome c oxidase II
mm10_v2_chr13_+_5861489_5861501	0.983242	En2	ENSMUST00000000080.6|Klf6|ENSMUSG00000000078.6|Kruppel-like factor 6
mm10_v2_chr10_+_26772477_26772515	0.955311	En2	ENSMUST00000039557.7|Arhgap18|ENSMUSG00000039031.9|Rho GTPase activating protein 18
mm10_v2_chr1_+_110099295_110099295	0.949183	En2	ENSMUST00000134301.1|Cdh7|ENSMUSG00000026312.11|cadherin 7, type 2
mm10_v2_chr1_+_131527901_131527911	0.947856	En2	ENSMUST00000068613.4|Fam72a|ENSMUSG00000055184.4|family with sequence similarity 72, member A
mm10_v2_chr2_+_71389239_71389278	0.897037	En2	ENSMUST00000028408.2|Hat1|ENSMUSG00000027018.5|histone aminotransferase 1
mm10_v2_chr4_-_14621805_14621819	0.861055	En2	ENSMUST00000042221.7|Slc26a7|ENSMUSG00000040569.7|solute carrier family 26, member 7
mm10_v2_chr3_-_141982224_141982264	0.842913	En2	ENSMUST00000029948.8|Bmpr1b|ENSMUSG00000052430.9|bone morphogenetic protein receptor, type 1B
mm10_v2_chr18_+_82914632_82914664	0.839213	En2	ENSMUST00000071233.6|Zfp516|ENSMUSG00000058881.6|zinc finger protein 516
mm10_v2_chr19_+_25406661_25406699	0.774177	En2	ENSMUST00000146647.1|Kank1|ENSMUSG00000032702.10|KN motif and ankyrin repeat domains 1
mm10_v2_chr15_-_38300693_38300715	0.747518	En2	ENSMUST00000074043.5|Klf10|ENSMUSG00000037465.9|Kruppel-like factor 10
mm10_v2_chr4_-_14621669_14621786	0.73764	En2	ENSMUST00000143105.1|Slc26a7|ENSMUSG00000040569.7|solute carrier family 26, member 7
mm10_v2_chrX_-_134111852_134111873	0.735418	En2	ENSMUST00000033610.6|Nox1|ENSMUSG00000031257.8|NADPH oxidase 1
mm10_v2_chr3_-_79841729_79841729	0.734871	En2	ENSMUST00000168038.1|Tmem144|ENSMUSG00000027956.5|transmembrane protein 144
mm10_v2_chr16_-_42340595_42340651	0.711236	En2	ENSMUST00000102817.4|Gap43|ENSMUSG00000047261.9|growth associated protein 43
mm10_v2_chr7_+_27486910_27486960	0.695226	En2	ENSMUST00000008528.7|Sertad1|ENSMUSG00000008384.8|SERTA domain containing 1
mm10_v2_chr7_+_101896340_101896431	0.644515	En2	ENSMUST00000035395.7|Anapc15|ENSMUSG00000030649.11|anaphase prompoting complex C subunit 15 	ENSMUST00000106973.1|Anapc15|ENSMUSG00000030649.11|anaphase prompoting complex C subunit 15 	ENSMUST00000144207.1|Anapc15|ENSMUSG00000030649.11|anaphase prompoting complex C subunit 15
mm10_v2_chr9_-_66514567_66514597	0.64323	En2	ENSMUST00000056890.8|Fbxl22|ENSMUSG00000050503.8|F-box and leucine-rich repeat protein 22
mm10_v2_chr12_-_56613270_56613291	0.622015	En2	ENSMUST00000072631.5|Nkx2-9|ENSMUSG00000058669.7|NK2 homeobox 9
mm10_v2_chr9_+_45138437_45138462	0.61027	En2	ENSMUST00000060125.5|Scn4b|ENSMUSG00000046480.5|sodium channel, type IV, beta
mm10_v2_chr4_+_130047840_130047901	0.6005	En2	ENSMUST00000044565.8|Col16a1|ENSMUSG00000040690.9|collagen, type XVI, alpha 1 	ENSMUST00000132251.1|Col16a1|ENSMUSG00000040690.9|collagen, type XVI, alpha 1
mm10_v2_chr3_+_96268654_96268683	0.588694	En2	ENSMUST00000098843.2|Hist2h3b|ENSMUSG00000074403.2|histone cluster 2, H3b
mm10_v2_chr4_-_14621494_14621506	0.587668	En2	ENSMUST00000149633.1|Slc26a7|ENSMUSG00000040569.7|solute carrier family 26, member 7
mm10_v2_chr10_-_109010955_109010983	0.568297	En2	ENSMUST00000105276.1|Syt1|ENSMUSG00000035864.8|synaptotagmin I 	ENSMUST00000064054.7|Syt1|ENSMUSG00000035864.8|synaptotagmin I
mm10_v2_chr7_-_116198487_116198561	0.568191	En2	ENSMUST00000181981.1|Plekha7|ENSMUSG00000045659.11|pleckstrin homology domain containing, family A member 7
mm10_v2_chr7_+_144838590_144838614	0.561192	En2	ENSMUST00000105898.1|Fgf3|ENSMUSG00000031074.8|fibroblast growth factor 3
mm10_v2_chr15_+_80255184_80255263	0.558716	En2	ENSMUST00000109605.3|Atf4|ENSMUSG00000042406.7|activating transcription factor 4
mm10_v2_chr4_+_150237694_150237705	0.539746	En2	ENSMUST00000141931.1|Eno1|ENSMUSG00000063524.7|enolase 1, alpha non-neuron
mm10_v2_chr5_+_81021583_81021593	0.537018	En2	ENSMUST00000121707.1|Lphn3|ENSMUSG00000037605.10|latrophilin 3
mm10_v2_chr1_-_78968079_78968079	0.525147	En2	ENSMUST00000049117.5|Gm5830|ENSMUSG00000072978.2|predicted pseudogene 5830
mm10_v2_chr9_-_107635330_107635353	0.520725	En2	ENSMUST00000055704.6|Gnai2|ENSMUSG00000032562.8|guanine nucleotide binding protein (G protein), alpha inhibiting 2
mm10_v2_chr18_-_88927447_88927481	0.491776	En2	ENSMUST00000147313.1|Socs6|ENSMUSG00000056153.8|suppressor of cytokine signaling 6
mm10_v2_chr2_+_14873656_14873820	0.46015	En2	ENSMUST00000114718.1|Cacnb2|ENSMUSG00000057914.9|calcium channel, voltage-dependent, beta 2 subunit 	ENSMUST00000114719.1|Cacnb2|ENSMUSG00000057914.9|calcium channel, voltage-dependent, beta 2 subunit
mm10_v2_chr5_+_135106881_135106918	0.456787	En2	ENSMUST00000005507.3|Mlxipl|ENSMUSG00000005373.7|MLX interacting protein-like
mm10_v2_chrX_+_102119447_102119490	0.447595	En2	ENSMUST00000113627.3|Pin4|ENSMUSG00000079480.3|protein (peptidyl-prolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)
mm10_v2_chrX_-_57338598_57338729	0.433122	En2	ENSMUST00000033468.4|Arhgef6|ENSMUSG00000031133.6|Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6 	ENSMUST00000114736.1|Arhgef6|ENSMUSG00000031133.6|Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6
mm10_v2_chr14_+_58070547_58070547	0.426103	En2	ENSMUST00000165526.1|Fgf9|ENSMUSG00000021974.8|fibroblast growth factor 9
mm10_v2_chr9_-_109082372_109082414	0.413779	En2	ENSMUST00000167504.1|Tma7|ENSMUSG00000091537.1|translational machinery associated 7 homolog (S. cerevisiae)
mm10_v2_chrX_-_136741155_136741352	0.409347	En2	ENSMUST00000166930.1|Morf4l2|ENSMUSG00000031422.10|mortality factor 4 like 2 	ENSMUST00000113095.1|Morf4l2|ENSMUSG00000031422.10|mortality factor 4 like 2 	ENSMUST00000155207.1|Morf4l2|ENSMUSG00000031422.10|mortality factor 4 like 2 	ENSMUST00000080411.6|Morf4l2|ENSMUSG00000031422.10|mortality factor 4 like 2 	ENSMUST00000169418.1|Morf4l2|ENSMUSG00000031422.10|mortality factor 4 like 2
mm10_v2_chr18_+_56432116_56432163	0.407857	En2	ENSMUST00000070166.5|Gramd3|ENSMUSG00000001700.9|GRAM domain containing 3
mm10_v2_chr12_-_91779129_91779144	0.40053	En2	ENSMUST00000170077.1|Ston2|ENSMUSG00000020961.8|stonin 2
mm10_v2_chr5_+_138187485_138187521	0.399688	En2	ENSMUST00000110934.2|Cnpy4|ENSMUSG00000036968.9|canopy 4 homolog (zebrafish)
mm10_v2_chr13_-_113663670_113663681	0.397014	En2	ENSMUST00000054650.4|Hspb3|ENSMUSG00000051456.4|heat shock protein 3
mm10_v2_chr13_+_23574381_23574449	0.372465	En2	ENSMUST00000090776.4|Hist1h2ad|ENSMUSG00000071478.4|histone cluster 1, H2ad
mm10_v2_chr2_+_9882622_9882646	0.370629	En2	ENSMUST00000114919.1|4930412O13Rik|ENSMUSG00000025783.2|RIKEN cDNA 4930412O13 gene
mm10_v2_chr14_+_67716262_67716359	0.35899	En2	ENSMUST00000150768.1|Kctd9|ENSMUSG00000034327.11|potassium channel tetramerisation domain containing 9
mm10_v2_chr8_-_84237042_84237061	0.356685	En2	ENSMUST00000039480.5|Zswim4|ENSMUSG00000035671.5|zinc finger SWIM-type containing 4
mm10_v2_chr7_+_103550368_103550368	0.352245	En2	ENSMUST00000106888.1|Olfr613|ENSMUSG00000078624.2|olfactory receptor 613
mm10_v2_chr18_-_61707583_61707658	0.349719	En2	ENSMUST00000025472.1|Pcyox1l|ENSMUSG00000024579.2|prenylcysteine oxidase 1 like
mm10_v2_chr1_-_75046639_75046639	0.342405	En2	ENSMUST00000152855.1|Nhej1|ENSMUSG00000026162.6|nonhomologous end-joining factor 1
mm10_v2_chr12_+_108605757_108605814	0.314928	En2	ENSMUST00000109854.2|Evl|ENSMUSG00000021262.8|Ena-vasodilator stimulated phosphoprotein
mm10_v2_chr6_-_85451248_85451283	0.313617	En2	ENSMUST00000113770.1|Pradc1|ENSMUSG00000030008.3|protease-associated domain containing 1 	ENSMUST00000032080.2|Pradc1|ENSMUSG00000030008.3|protease-associated domain containing 1
mm10_v2_chr7_-_30559828_30559842	0.306777	En2	ENSMUST00000108164.1|Lin37|ENSMUSG00000036845.6|lin-37 homolog (C. elegans)
mm10_v2_chr3_+_96629919_96629955	0.304243	En2	ENSMUST00000048915.6|Rbm8a|ENSMUSG00000038374.6|RNA binding motif protein 8a
mm10_v2_chr3_-_55055038_55055055	0.303087	En2	ENSMUST00000029368.2|Ccna1|ENSMUSG00000027793.2|cyclin A1
mm10_v2_chrX_-_157415286_157415318	0.2995	En2	ENSMUST00000079945.4|Phex|ENSMUSG00000057457.5|phosphate regulating gene with homologies to endopeptidases on the X chromosome (hypophosphatemia, vitamin D resistant rickets) 	ENSMUST00000138396.1|Phex|ENSMUSG00000057457.5|phosphate regulating gene with homologies to endopeptidases on the X chromosome (hypophosphatemia, vitamin D resistant rickets)
mm10_v2_chrX_+_75514299_75514316	0.294495	En2	ENSMUST00000114070.3|Vbp1|ENSMUSG00000031197.5|von Hippel-Lindau binding protein 1 	ENSMUST00000033540.5|Vbp1|ENSMUSG00000031197.5|von Hippel-Lindau binding protein 1
mm10_v2_chr17_+_35424842_35424856	0.293038	En2	ENSMUST00000174699.1|H2-Q6|ENSMUSG00000073409.6|histocompatibility 2, Q region locus 6
mm10_v2_chr5_-_138187177_138187237	0.290971	En2	ENSMUST00000110937.1|Taf6|ENSMUSG00000036980.7|TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor 	ENSMUST00000139276.1|Taf6|ENSMUSG00000036980.7|TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor 	ENSMUST00000048698.7|Taf6|ENSMUSG00000036980.7|TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor 	ENSMUST00000123415.1|Taf6|ENSMUSG00000036980.7|TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor
mm10_v2_chr17_-_24886304_24886353	0.286996	En2	ENSMUST00000044252.5|Nubp2|ENSMUSG00000039183.5|nucleotide binding protein 2
mm10_v2_chr6_-_71632897_71632947	0.281315	En2	ENSMUST00000065509.4|Kdm3a|ENSMUSG00000053470.7|lysine (K)-specific demethylase 3A
mm10_v2_chr8_-_84662841_84662859	0.268667	En2	ENSMUST00000060427.4|Ier2|ENSMUSG00000053560.4|immediate early response 2
mm10_v2_chrM_+_3906_3926	0.26664	En2	ENSMUST00000082396.1|mt-Nd2|ENSMUSG00000064345.1|mitochondrially encoded NADH dehydrogenase 2
mm10_v2_chr11_-_31671863_31671885	0.266144	En2	ENSMUST00000058060.7|Bod1|ENSMUSG00000044502.10|biorientation of chromosomes in cell division 1
mm10_v2_chr7_-_45830776_45830944	0.264419	En2	ENSMUST00000107723.2|Grwd1|ENSMUSG00000053801.10|glutamate-rich WD repeat containing 1 	ENSMUST00000131384.1|Grwd1|ENSMUSG00000053801.10|glutamate-rich WD repeat containing 1
mm10_v2_chr12_+_72441852_72441866	0.263045	En2	ENSMUST00000162159.1|Lrrc9|ENSMUSG00000021090.9|leucine rich repeat containing 9
mm10_v2_chrM_+_7759_7927	0.255252	En2	ENSMUST00000082407.1|mt-Atp8|ENSMUSG00000064356.3|mitochondrially encoded ATP synthase 8 	ENSMUST00000082408.1|mt-Atp6|ENSMUSG00000064357.1|mitochondrially encoded ATP synthase 6
mm10_v2_chr19_+_6046576_6046662	0.252937	En2	ENSMUST00000138532.1|Syvn1|ENSMUSG00000024807.11|synovial apoptosis inhibitor 1, synoviolin 	ENSMUST00000129081.1|Syvn1|ENSMUSG00000024807.11|synovial apoptosis inhibitor 1, synoviolin 	ENSMUST00000156550.1|Syvn1|ENSMUSG00000024807.11|synovial apoptosis inhibitor 1, synoviolin
mm10_v2_chr7_-_30559600_30559659	0.247302	En2	ENSMUST00000043975.4|Lin37|ENSMUSG00000036845.6|lin-37 homolog (C. elegans) 	ENSMUST00000156241.1|Lin37|ENSMUSG00000036845.6|lin-37 homolog (C. elegans)
mm10_v2_chr12_+_72441933_72441970	0.246269	En2	ENSMUST00000161284.1|Lrrc9|ENSMUSG00000021090.9|leucine rich repeat containing 9
mm10_v2_chr18_+_84851338_84851429	0.241016	En2	ENSMUST00000160180.1|Cyb5|ENSMUSG00000024646.7|cytochrome b-5
mm10_v2_chr16_+_52031549_52031570	0.240753	En2	ENSMUST00000114471.1|Cblb|ENSMUSG00000022637.10|Casitas B-lineage lymphoma b
mm10_v2_chr5_+_88583527_88583590	0.234182	En2	ENSMUST00000031229.6|Rufy3|ENSMUSG00000029291.7|RUN and FYVE domain containing 3
mm10_v2_chr3_+_19188099_19188110	0.232967	En2	ENSMUST00000130645.1|Mtfr1|ENSMUSG00000027601.7|mitochondrial fission regulator 1
mm10_v2_chr1_+_66468364_66468435	0.225966	En2	ENSMUST00000061620.9|Unc80|ENSMUSG00000055567.10|unc-80 homolog (C. elegans)
mm10_v2_chr3_+_76075583_76075583	0.218002	En2	ENSMUST00000160261.1|Fstl5|ENSMUSG00000034098.8|follistatin-like 5
mm10_v2_chr14_-_55560340_55560406	0.217463	En2	ENSMUST00000066106.3|A730061H03Rik|ENSMUSG00000053588.3|RIKEN cDNA A730061H03 gene
mm10_v2_chr17_+_45734506_45734630	0.216368	En2	ENSMUST00000180558.1|F630040K05Rik|ENSMUSG00000097727.1|RIKEN cDNA F630040K05 gene
mm10_v2_chr3_-_107333289_107333289	0.210803	En2	ENSMUST00000061772.9|Rbm15|ENSMUSG00000048109.9|RNA binding motif protein 15
mm10_v2_chr12_-_85280361_85280435	0.208922	En2	ENSMUST00000065913.7|Acyp1|ENSMUSG00000008822.9|acylphosphatase 1, erythrocyte (common) type 	ENSMUST00000008966.6|Acyp1|ENSMUSG00000008822.9|acylphosphatase 1, erythrocyte (common) type
mm10_v2_chr3_+_88207308_88207328	0.207543	En2	ENSMUST00000180582.1|Gm3764|ENSMUSG00000097156.1|predicted gene 3764
mm10_v2_chr6_-_71632651_71632694	0.200932	En2	ENSMUST00000167220.1|Kdm3a|ENSMUSG00000053470.7|lysine (K)-specific demethylase 3A
mm10_v2_chr6_-_146502141_146502230	0.190114	En2	ENSMUST00000079573.6|Itpr2|ENSMUSG00000030287.9|inositol 1,4,5-triphosphate receptor 2 	ENSMUST00000139732.1|Itpr2|ENSMUSG00000030287.9|inositol 1,4,5-triphosphate receptor 2
mm10_v2_chrM_+_9452_9468	0.188705	En2	ENSMUST00000082411.1|mt-Nd3|ENSMUSG00000064360.1|mitochondrially encoded NADH dehydrogenase 3
mm10_v2_chr14_+_32321987_32322042	0.188537	En2	ENSMUST00000022480.7|Ogdhl|ENSMUSG00000021913.7|oxoglutarate dehydrogenase-like
mm10_v2_chr13_-_23574196_23574229	0.184043	En2	ENSMUST00000105106.1|Hist1h2bf|ENSMUSG00000069268.4|histone cluster 1, H2bf
mm10_v2_chr9_+_113930934_113930987	0.177224	En2	ENSMUST00000084885.5|Ubp1|ENSMUSG00000009741.8|upstream binding protein 1 	ENSMUST00000009885.7|Ubp1|ENSMUSG00000009741.8|upstream binding protein 1
mm10_v2_chr19_+_25672408_25672420	0.168438	En2	ENSMUST00000053068.5|Dmrt2|ENSMUSG00000048138.9|doublesex and mab-3 related transcription factor 2
mm10_v2_chr7_+_88430257_88430286	0.148101	En2	ENSMUST00000107256.2|Rab38|ENSMUSG00000030559.7|RAB38, member of RAS oncogene family
mm10_v2_chr9_-_71163224_71163293	0.141549	En2	ENSMUST00000074465.2|Aqp9|ENSMUSG00000032204.7|aquaporin 9
mm10_v2_chr13_-_92030897_92030908	0.125245	En2	ENSMUST00000149630.1|Rasgrf2|ENSMUSG00000021708.10|RAS protein-specific guanine nucleotide-releasing factor 2
mm10_v2_chr14_+_79515618_79515694	0.116017	En2	ENSMUST00000110835.1|Elf1|ENSMUSG00000036461.9|E74-like factor 1
mm10_v2_chr13_-_23710714_23710854	0.11186	En2	ENSMUST00000091707.6|Hfe|ENSMUSG00000006611.8|hemochromatosis 	ENSMUST00000006787.7|Hfe|ENSMUSG00000006611.8|hemochromatosis 	ENSMUST00000091706.6|Hfe|ENSMUSG00000006611.8|hemochromatosis
mm10_v2_chr14_+_53324632_53324632	0.108412	En2	ENSMUST00000178100.1|Trav7n-6|ENSMUSG00000095415.1|T cell receptor alpha variable 7N-6
mm10_v2_chrM_+_2743_2761	0.10562	En2	ENSMUST00000082392.1|mt-Nd1|ENSMUSG00000064341.1|mitochondrially encoded NADH dehydrogenase 1
mm10_v2_chr17_-_12960306_12960386	0.103622	En2	ENSMUST00000159697.1|Acat2|ENSMUSG00000023832.7|acetyl-Coenzyme A acetyltransferase 2
mm10_v2_chr3_-_146682410_146682522	0.0980461	En2	ENSMUST00000124931.1|Samd13|ENSMUSG00000048652.6|sterile alpha motif domain containing 13 	ENSMUST00000147113.1|Samd13|ENSMUSG00000048652.6|sterile alpha motif domain containing 13
mm10_v2_chr2_+_152754156_152754186	0.0979293	En2	ENSMUST00000010020.5|Cox4i2|ENSMUSG00000009876.7|cytochrome c oxidase subunit IV isoform 2
mm10_v2_chr5_-_137531952_137531984	0.0941546	En2	ENSMUST00000140139.1|Gnb2|ENSMUSG00000029713.9|guanine nucleotide binding protein (G protein), beta 2
mm10_v2_chr18_+_42511496_42511521	0.093318	En2	ENSMUST00000025375.7|Tcerg1|ENSMUSG00000024498.9|transcription elongation regulator 1 (CA150)
mm10_v2_chr19_+_3851797_3851811	0.0917602	En2	ENSMUST00000072055.6|Chka|ENSMUSG00000024843.9|choline kinase alpha
mm10_v2_chr8_+_106150359_106150417	0.0914965	En2	ENSMUST00000034377.6|Pla2g15|ENSMUSG00000031903.6|phospholipase A2, group XV
mm10_v2_chr19_-_6942406_6942450	0.0909993	En2	ENSMUST00000099782.3|Gpr137|ENSMUSG00000024958.6|G protein-coupled receptor 137
mm10_v2_chr3_+_108653931_108653964	0.0651788	En2	ENSMUST00000029483.8|Clcc1|ENSMUSG00000027884.10|chloride channel CLIC-like 1 	ENSMUST00000124384.1|Clcc1|ENSMUSG00000027884.10|chloride channel CLIC-like 1
mm10_v2_chr11_-_102946688_102946725	0.0636531	En2	ENSMUST00000057849.5|C1ql1|ENSMUSG00000045532.5|complement component 1, q subcomponent-like 1
mm10_v2_chr7_+_5015466_5015509	0.0610077	En2	ENSMUST00000086349.3|Zfp524|ENSMUSG00000051184.6|zinc finger protein 524
mm10_v2_chrX_+_152001845_152001908	0.0598122	En2	ENSMUST00000026289.3|Hsd17b10|ENSMUSG00000025260.4|hydroxysteroid (17-beta) dehydrogenase 10 	ENSMUST00000112617.3|Hsd17b10|ENSMUSG00000025260.4|hydroxysteroid (17-beta) dehydrogenase 10
mm10_v2_chr15_+_100334929_100334929	0.0516257	En2	ENSMUST00000075420.4|Mettl7a3|ENSMUSG00000058057.4|methyltransferase like 7A3
mm10_v2_chr16_+_45093611_45093622	0.0466206	En2	ENSMUST00000099498.2|Ccdc80|ENSMUSG00000022665.8|coiled-coil domain containing 80
mm10_v2_chrX_-_37110257_37110346	0.0422521	En2	ENSMUST00000076265.6|Upf3b|ENSMUSG00000036572.10|UPF3 regulator of nonsense transcripts homolog B (yeast)
mm10_v2_chrX_+_56454871_56454887	0.0400583	En2	ENSMUST00000039374.2|Ddx26b|ENSMUSG00000035967.9|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B 	ENSMUST00000101553.2|Ddx26b|ENSMUSG00000035967.9|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B
mm10_v2_chrX_+_20687954_20688039	0.0393774	En2	ENSMUST00000115364.1|Cdk16|ENSMUSG00000031065.8|cyclin-dependent kinase 16
mm10_v2_chr11_-_31671727_31671856	0.0360412	En2	ENSMUST00000109415.1|Bod1|ENSMUSG00000044502.10|biorientation of chromosomes in cell division 1
mm10_v2_chr9_+_107563246_107563285	0.0328286	En2	ENSMUST00000010198.3|Tusc2|ENSMUSG00000010054.3|tumor suppressor candidate 2
mm10_v2_chr19_+_6942501_6942584	0.0307553	En2	ENSMUST00000113423.3|Bad|ENSMUSG00000024959.7|BCL2-associated agonist of cell death
mm10_v2_chr4_+_150853919_150854050	0.0293205	En2	ENSMUST00000073600.2|Errfi1|ENSMUSG00000028967.4|ERBB receptor feedback inhibitor 1
mm10_v2_chr19_+_3851972_3852076	0.0277344	En2	ENSMUST00000025760.6|Chka|ENSMUSG00000024843.9|choline kinase alpha
mm10_v2_chr2_-_27475622_27475698	0.0251691	En2	ENSMUST00000138693.1|Brd3|ENSMUSG00000026918.10|bromodomain containing 3 	ENSMUST00000113941.2|Brd3|ENSMUSG00000026918.10|bromodomain containing 3 	ENSMUST00000077737.6|Brd3|ENSMUSG00000026918.10|bromodomain containing 3
mm10_v2_chr7_+_25681158_25681158	0.0246916	En2	ENSMUST00000108403.3|B9d2|ENSMUSG00000063439.6|B9 protein domain 2
mm10_v2_chr11_+_69059750_69059809	0.0135764	En2	ENSMUST00000051888.2|2310047M10Rik|ENSMUSG00000045176.2|RIKEN cDNA 2310047M10 gene
mm10_v2_chr4_+_21848039_21848077	0.0122086	En2	ENSMUST00000098238.2|Sfrs18|ENSMUSG00000028248.9|serine/arginine-rich splicing factor 18 	ENSMUST00000108229.1|Sfrs18|ENSMUSG00000028248.9|serine/arginine-rich splicing factor 18
mm10_v2_chr6_+_85451488_85451505	0.00305767	En2	ENSMUST00000032078.6|Cct7|ENSMUSG00000030007.6|chaperonin containing Tcp1, subunit 7 (eta)
mm10_v2_chr8_+_94037198_94037291	0.00252242	En2	ENSMUST00000109556.2|Ogfod1|ENSMUSG00000033009.9|2-oxoglutarate and iron-dependent oxygenase domain containing 1 	ENSMUST00000093301.2|Ogfod1|ENSMUSG00000033009.9|2-oxoglutarate and iron-dependent oxygenase domain containing 1 	ENSMUST00000060632.7|Ogfod1|ENSMUSG00000033009.9|2-oxoglutarate and iron-dependent oxygenase domain containing 1
