mm10_v2_chr4_-_132757162_132757252	5.26282	Nkx3-1	ENSMUST00000030709.8|Smpdl3b|ENSMUSG00000028885.8|sphingomyelin phosphodiesterase, acid-like 3B
mm10_v2_chr10_-_13324160_13324242	4.80197	Nkx3-1	ENSMUST00000105545.4|Phactr2|ENSMUSG00000062866.9|phosphatase and actin regulator 2
mm10_v2_chr3_-_57575760_57575836	4.68435	Nkx3-1	ENSMUST00000029380.7|Wwtr1|ENSMUSG00000027803.8|WW domain containing transcription regulator 1
mm10_v2_chr3_-_57575907_57575912	4.63693	Nkx3-1	ENSMUST00000120977.1|Wwtr1|ENSMUSG00000027803.8|WW domain containing transcription regulator 1
mm10_v2_chrX_+_100625737_100625737	3.91847	Nkx3-1	ENSMUST00000048962.3|Kif4|ENSMUSG00000034311.3|kinesin family member 4
mm10_v2_chr9_+_78191966_78191999	3.87107	Nkx3-1	ENSMUST00000034903.5|Gsta4|ENSMUSG00000032348.5|glutathione S-transferase, alpha 4
mm10_v2_chr18_+_60963517_60963603	2.89281	Nkx3-1	ENSMUST00000115295.2|Camk2a|ENSMUSG00000024617.10|calcium/calmodulin-dependent protein kinase II alpha 	ENSMUST00000039904.6|Camk2a|ENSMUSG00000024617.10|calcium/calmodulin-dependent protein kinase II alpha
mm10_v2_chr9_+_72438534_72438578	2.52139	Nkx3-1	ENSMUST00000034746.8|Mns1|ENSMUSG00000032221.8|meiosis-specific nuclear structural protein 1
mm10_v2_chr6_+_128362919_128363058	2.41828	Nkx3-1	ENSMUST00000073316.6|Foxm1|ENSMUSG00000001517.8|forkhead box M1
mm10_v2_chr10_-_13324250_13324318	2.27366	Nkx3-1	ENSMUST00000105543.1|Phactr2|ENSMUSG00000062866.9|phosphatase and actin regulator 2
mm10_v2_chr5_+_136919137_136919188	2.26542	Nkx3-1	ENSMUST00000181045.1|4933404O12Rik|ENSMUSG00000097908.1|RIKEN cDNA 4933404O12 gene
mm10_v2_chr1_-_163289214_163289235	2.26416	Nkx3-1	ENSMUST00000183691.1|Prrx1|ENSMUSG00000026586.10|paired related homeobox 1
mm10_v2_chr9_+_72438519_72438533	2.2281	Nkx3-1	ENSMUST00000184604.1|Mns1|ENSMUSG00000032221.8|meiosis-specific nuclear structural protein 1
mm10_v2_chr3_-_104818539_104818572	2.22692	Nkx3-1	ENSMUST00000106774.1|Mov10|ENSMUSG00000002227.9|Moloney leukemia virus 10 	ENSMUST00000106775.1|Mov10|ENSMUSG00000002227.9|Moloney leukemia virus 10 	ENSMUST00000166979.1|Mov10|ENSMUSG00000002227.9|Moloney leukemia virus 10 	ENSMUST00000136148.1|Mov10|ENSMUSG00000002227.9|Moloney leukemia virus 10
mm10_v2_chr8_+_114133557_114133597	2.1668	Nkx3-1	ENSMUST00000073521.5|Nudt7|ENSMUSG00000031767.7|nudix (nucleoside diphosphate linked moiety X)-type motif 7 	ENSMUST00000066514.6|Nudt7|ENSMUSG00000031767.7|nudix (nucleoside diphosphate linked moiety X)-type motif 7
mm10_v2_chr8_+_114133635_114133662	2.12698	Nkx3-1	ENSMUST00000147605.1|Nudt7|ENSMUSG00000031767.7|nudix (nucleoside diphosphate linked moiety X)-type motif 7 	ENSMUST00000134593.1|Nudt7|ENSMUSG00000031767.7|nudix (nucleoside diphosphate linked moiety X)-type motif 7
mm10_v2_chr17_+_56304313_56304407	2.10131	Nkx3-1	ENSMUST00000113035.1|Uhrf1|ENSMUSG00000001228.8|ubiquitin-like, containing PHD and RING finger domains, 1 	ENSMUST00000113039.2|Uhrf1|ENSMUSG00000001228.8|ubiquitin-like, containing PHD and RING finger domains, 1 	ENSMUST00000142387.1|Uhrf1|ENSMUSG00000001228.8|ubiquitin-like, containing PHD and RING finger domains, 1
mm10_v2_chr9_-_124493793_124493793	1.85999	Nkx3-1	ENSMUST00000178787.1|Gm21836|ENSMUSG00000096734.1|predicted gene, 21836
mm10_v2_chr5_-_8422582_8422693	1.78198	Nkx3-1	ENSMUST00000168500.1|Dbf4|ENSMUSG00000002297.9|DBF4 homolog (S. cerevisiae) 	ENSMUST00000002368.9|Dbf4|ENSMUSG00000002297.9|DBF4 homolog (S. cerevisiae)
mm10_v2_chr17_-_25727364_25727426	1.73335	Nkx3-1	ENSMUST00000170070.1|Chtf18|ENSMUSG00000019214.7|CTF18, chromosome transmission fidelity factor 18 	ENSMUST00000048054.7|Chtf18|ENSMUSG00000019214.7|CTF18, chromosome transmission fidelity factor 18
mm10_v2_chrX_-_75874536_75874590	1.729	Nkx3-1	ENSMUST00000033547.7|Pls3|ENSMUSG00000016382.9|plastin 3 (T-isoform)
mm10_v2_chrX_-_75875101_75875182	1.71935	Nkx3-1	ENSMUST00000114059.3|Pls3|ENSMUSG00000016382.9|plastin 3 (T-isoform)
mm10_v2_chr1_-_133907053_133907172	1.67809	Nkx3-1	ENSMUST00000149380.1|Optc|ENSMUSG00000010311.9|opticin 	ENSMUST00000124051.2|Optc|ENSMUSG00000010311.9|opticin
mm10_v2_chr9_-_20976762_20976793	1.58518	Nkx3-1	ENSMUST00000054197.5|S1pr2|ENSMUSG00000043895.5|sphingosine-1-phosphate receptor 2
mm10_v2_chr5_-_149051300_149051390	1.53542	Nkx3-1	ENSMUST00000110505.1|Hmgb1|ENSMUSG00000066551.6|high mobility group box 1
mm10_v2_chr8_-_123318553_123318579	1.51984	Nkx3-1	ENSMUST00000118395.1|Fanca|ENSMUSG00000032815.9|Fanconi anemia, complementation group A 	ENSMUST00000035495.8|Fanca|ENSMUSG00000032815.9|Fanconi anemia, complementation group A
mm10_v2_chr7_+_58658181_58658294	1.44787	Nkx3-1	ENSMUST00000168747.1|Atp10a|ENSMUSG00000025324.7|ATPase, class V, type 10A
mm10_v2_chr4_-_140774196_140774236	1.34758	Nkx3-1	ENSMUST00000026381.6|Padi4|ENSMUSG00000025330.6|peptidyl arginine deiminase, type IV
mm10_v2_chr10_+_94514825_94514922	1.33801	Nkx3-1	ENSMUST00000065060.5|Tmcc3|ENSMUSG00000020023.11|transmembrane and coiled coil domains 3
mm10_v2_chr1_-_133906973_133907014	1.19455	Nkx3-1	ENSMUST00000126123.1|Optc|ENSMUSG00000010311.9|opticin
mm10_v2_chr11_+_97685903_97685966	1.13559	Nkx3-1	ENSMUST00000107583.2|Cisd3|ENSMUSG00000078695.2|CDGSH iron sulfur domain 3
mm10_v2_chr12_+_52516077_52516077	1.13462	Nkx3-1	ENSMUST00000110725.1|Arhgap5|ENSMUSG00000035133.8|Rho GTPase activating protein 5
mm10_v2_chrX_+_164269371_164269522	1.12834	Nkx3-1	ENSMUST00000145412.1|Pir|ENSMUSG00000031379.7|pirin 	ENSMUST00000033749.7|Pir|ENSMUSG00000031379.7|pirin
mm10_v2_chr13_+_51408618_51408781	1.10201	Nkx3-1	ENSMUST00000087978.3|S1pr3|ENSMUSG00000067586.3|sphingosine-1-phosphate receptor 3
mm10_v2_chr4_+_62619515_62619582	1.09344	Nkx3-1	ENSMUST00000084521.4|Rgs3|ENSMUSG00000059810.12|regulator of G-protein signaling 3 	ENSMUST00000107424.1|Rgs3|ENSMUSG00000059810.12|regulator of G-protein signaling 3
mm10_v2_chr10_-_12861735_12861735	1.00659	Nkx3-1	ENSMUST00000076817.4|Utrn|ENSMUSG00000019820.9|utrophin
mm10_v2_chr18_+_82910863_82910885	1.00375	Nkx3-1	ENSMUST00000171238.1|Zfp516|ENSMUSG00000058881.6|zinc finger protein 516
mm10_v2_chr11_+_97685794_97685845	0.992545	Nkx3-1	ENSMUST00000107584.1|Cisd3|ENSMUSG00000078695.2|CDGSH iron sulfur domain 3 	ENSMUST00000107585.2|Cisd3|ENSMUSG00000078695.2|CDGSH iron sulfur domain 3
mm10_v2_chr4_-_156255327_156255344	0.988239	Nkx3-1	ENSMUST00000179919.1|Samd11|ENSMUSG00000096351.1|sterile alpha motif domain containing 11
mm10_v2_chr4_+_3940747_3940854	0.979606	Nkx3-1	ENSMUST00000119403.1|Chchd7|ENSMUSG00000042198.6|coiled-coil-helix-coiled-coil-helix domain containing 7
mm10_v2_chr4_+_32623985_32624084	0.896459	Nkx3-1	ENSMUST00000108178.1|Casp8ap2|ENSMUSG00000028282.6|caspase 8 associated protein 2
mm10_v2_chr2_+_110597298_110597316	0.853279	Nkx3-1	ENSMUST00000045972.6|Slc5a12|ENSMUSG00000041644.8|solute carrier family 5 (sodium/glucose cotransporter), member 12 	ENSMUST00000111026.2|Slc5a12|ENSMUSG00000041644.8|solute carrier family 5 (sodium/glucose cotransporter), member 12
mm10_v2_chr2_+_62664279_62664300	0.853001	Nkx3-1	ENSMUST00000028257.2|Gca|ENSMUSG00000026893.4|grancalcin
mm10_v2_chrX_-_100625901_100625954	0.795576	Nkx3-1	ENSMUST00000059099.6|Pdzd11|ENSMUSG00000015668.7|PDZ domain containing 11
mm10_v2_chr1_-_75046639_75046639	0.790975	Nkx3-1	ENSMUST00000152855.1|Nhej1|ENSMUSG00000026162.6|nonhomologous end-joining factor 1
mm10_v2_chr11_-_21370452_21370485	0.789577	Nkx3-1	ENSMUST00000102875.4|Ugp2|ENSMUSG00000001891.10|UDP-glucose pyrophosphorylase 2
mm10_v2_chr8_+_36457548_36457574	0.787251	Nkx3-1	ENSMUST00000135373.1|6430573F11Rik|ENSMUSG00000039620.10|RIKEN cDNA 6430573F11 gene 	ENSMUST00000147525.1|6430573F11Rik|ENSMUSG00000039620.10|RIKEN cDNA 6430573F11 gene
mm10_v2_chr6_-_108185552_108185587	0.762853	Nkx3-1	ENSMUST00000167338.1|Sumf1|ENSMUSG00000030101.9|sulfatase modifying factor 1 	ENSMUST00000172188.1|Sumf1|ENSMUSG00000030101.9|sulfatase modifying factor 1 	ENSMUST00000032191.9|Sumf1|ENSMUSG00000030101.9|sulfatase modifying factor 1
mm10_v2_chr5_-_86676346_86676369	0.753697	Nkx3-1	ENSMUST00000038448.6|Tmprss11bnl|ENSMUSG00000035861.6|transmembrane protease, serine 11b N terminal like
mm10_v2_chr4_+_116708571_116708609	0.745941	Nkx3-1	ENSMUST00000106462.2|Ccdc163|ENSMUSG00000028689.8|coiled-coil domain containing 163 	ENSMUST00000138305.1|Ccdc163|ENSMUSG00000028689.8|coiled-coil domain containing 163 	ENSMUST00000125671.1|Ccdc163|ENSMUSG00000028689.8|coiled-coil domain containing 163 	ENSMUST00000130828.1|Ccdc163|ENSMUSG00000028689.8|coiled-coil domain containing 163
mm10_v2_chr17_+_37270214_37270249	0.731174	Nkx3-1	ENSMUST00000038580.6|H2-M3|ENSMUSG00000016206.6|histocompatibility 2, M region locus 3
mm10_v2_chr10_+_100488289_100488289	0.730567	Nkx3-1	ENSMUST00000164751.1|Cep290|ENSMUSG00000019971.9|centrosomal protein 290
mm10_v2_chr11_-_83645621_83645621	0.729573	Nkx3-1	ENSMUST00000182502.1|Rpl9-ps1|ENSMUSG00000081906.2|ribosomal protein L9, pseudogene 1
mm10_v2_chr1_-_53297001_53297023	0.722467	Nkx3-1	ENSMUST00000126590.1|Pms1|ENSMUSG00000026098.7|postmeiotic segregation increased 1 (S. cerevisiae) 	ENSMUST00000126412.1|Pms1|ENSMUSG00000026098.7|postmeiotic segregation increased 1 (S. cerevisiae) 	ENSMUST00000135246.1|Pms1|ENSMUSG00000026098.7|postmeiotic segregation increased 1 (S. cerevisiae) 	ENSMUST00000027267.7|Pms1|ENSMUSG00000026098.7|postmeiotic segregation increased 1 (S. cerevisiae)
mm10_v2_chr13_-_99900645_99900683	0.679036	Nkx3-1	ENSMUST00000022150.6|Cartpt|ENSMUSG00000021647.6|CART prepropeptide
mm10_v2_chr1_-_162866502_162866616	0.668165	Nkx3-1	ENSMUST00000046049.7|Fmo1|ENSMUSG00000040181.8|flavin containing monooxygenase 1
mm10_v2_chr5_+_90367204_90367204	0.658513	Nkx3-1	ENSMUST00000068250.3|Gm9958|ENSMUSG00000054945.3|predicted gene 9958
mm10_v2_chr15_-_50882806_50882822	0.622963	Nkx3-1	ENSMUST00000184885.1|Trps1|ENSMUSG00000038679.10|trichorhinophalangeal syndrome I (human)
mm10_v2_chr13_+_23571382_23571396	0.608475	Nkx3-1	ENSMUST00000079251.5|Hist1h2bg|ENSMUSG00000058385.6|histone cluster 1, H2bg
mm10_v2_chr10_+_4432467_4432661	0.605775	Nkx3-1	ENSMUST00000095893.4|1700052N19Rik|ENSMUSG00000061759.9|RIKEN cDNA 1700052N19 gene 	ENSMUST00000118544.1|1700052N19Rik|ENSMUSG00000061759.9|RIKEN cDNA 1700052N19 gene 	ENSMUST00000117489.1|1700052N19Rik|ENSMUSG00000061759.9|RIKEN cDNA 1700052N19 gene
mm10_v2_chr14_-_55788810_55788857	0.598981	Nkx3-1	ENSMUST00000022830.6|Ripk3|ENSMUSG00000022221.7|receptor-interacting serine-threonine kinase 3 	ENSMUST00000168716.1|Ripk3|ENSMUSG00000022221.7|receptor-interacting serine-threonine kinase 3 	ENSMUST00000178399.1|Ripk3|ENSMUSG00000022221.7|receptor-interacting serine-threonine kinase 3
mm10_v2_chr6_+_88465409_88465482	0.545154	Nkx3-1	ENSMUST00000032165.9|Ruvbl1|ENSMUSG00000030079.9|RuvB-like protein 1
mm10_v2_chr5_-_21785115_21785251	0.539558	Nkx3-1	ENSMUST00000115193.1|Dnajc2|ENSMUSG00000029014.8|DnaJ (Hsp40) homolog, subfamily C, member 2 	ENSMUST00000115192.1|Dnajc2|ENSMUSG00000029014.8|DnaJ (Hsp40) homolog, subfamily C, member 2 	ENSMUST00000115195.1|Dnajc2|ENSMUSG00000029014.8|DnaJ (Hsp40) homolog, subfamily C, member 2 	ENSMUST00000030771.5|Dnajc2|ENSMUSG00000029014.8|DnaJ (Hsp40) homolog, subfamily C, member 2
mm10_v2_chrX_+_7579666_7579693	0.53592	Nkx3-1	ENSMUST00000115740.1|Foxp3|ENSMUSG00000039521.6|forkhead box P3 	ENSMUST00000115739.1|Foxp3|ENSMUSG00000039521.6|forkhead box P3
mm10_v2_chrX_+_56317608_56317666	0.534675	Nkx3-1	ENSMUST00000151426.1|1600025M17Rik|ENSMUSG00000085114.1|RIKEN cDNA 1600025M17 gene 	ENSMUST00000138262.1|1600025M17Rik|ENSMUSG00000085114.1|RIKEN cDNA 1600025M17 gene
mm10_v2_chr10_-_128211788_128211823	0.531558	Nkx3-1	ENSMUST00000061995.8|Spryd4|ENSMUSG00000051346.8|SPRY domain containing 4
mm10_v2_chr11_-_3976778_3976778	0.525618	Nkx3-1	ENSMUST00000042344.1|4930556J24Rik|ENSMUSG00000034493.1|RIKEN cDNA 4930556J24 gene
mm10_v2_chr10_-_62486575_62486604	0.522945	Nkx3-1	ENSMUST00000092473.3|Vps26a|ENSMUSG00000020078.9|vacuolar protein sorting 26 homolog A (yeast)
mm10_v2_chr17_-_65772686_65772752	0.493796	Nkx3-1	ENSMUST00000070673.7|Rab31|ENSMUSG00000056515.8|RAB31, member RAS oncogene family
mm10_v2_chr1_+_167598450_167598480	0.488334	Nkx3-1	ENSMUST00000111386.1|Rxrg|ENSMUSG00000015843.4|retinoid X receptor gamma 	ENSMUST00000111384.1|Rxrg|ENSMUSG00000015843.4|retinoid X receptor gamma
mm10_v2_chr5_+_138161071_138161116	0.469013	Nkx3-1	ENSMUST00000019638.8|Cops6|ENSMUSG00000019494.8|COP9 (constitutive photomorphogenic) homolog, subunit 6 (Arabidopsis thaliana) 	ENSMUST00000110951.1|Cops6|ENSMUSG00000019494.8|COP9 (constitutive photomorphogenic) homolog, subunit 6 (Arabidopsis thaliana)
mm10_v2_chr1_+_167598384_167598411	0.467746	Nkx3-1	ENSMUST00000015987.3|Rxrg|ENSMUSG00000015843.4|retinoid X receptor gamma
mm10_v2_chr14_+_79515618_79515694	0.454923	Nkx3-1	ENSMUST00000110835.1|Elf1|ENSMUSG00000036461.9|E74-like factor 1
mm10_v2_chr7_+_100537192_100537232	0.453789	Nkx3-1	ENSMUST00000120454.1|Coa4|ENSMUSG00000044881.6|cytochrome c oxidase assembly factor 4
mm10_v2_chr9_-_35570393_35570402	0.444954	Nkx3-1	ENSMUST00000115110.4|Hyls1|ENSMUSG00000050555.9|hydrolethalus syndrome 1
mm10_v2_chr7_+_100537052_100537139	0.442543	Nkx3-1	ENSMUST00000054310.3|Coa4|ENSMUSG00000044881.6|cytochrome c oxidase assembly factor 4
mm10_v2_chr1_-_175688353_175688353	0.431221	Nkx3-1	ENSMUST00000104984.1|Chml|ENSMUSG00000078185.1|choroideremia-like
mm10_v2_chr2_+_79707780_79707927	0.422249	Nkx3-1	ENSMUST00000090760.2|Ppp1r1c|ENSMUSG00000034683.6|protein phosphatase 1, regulatory (inhibitor) subunit 1C 	ENSMUST00000040863.4|Ppp1r1c|ENSMUSG00000034683.6|protein phosphatase 1, regulatory (inhibitor) subunit 1C 	ENSMUST00000111780.2|Ppp1r1c|ENSMUSG00000034683.6|protein phosphatase 1, regulatory (inhibitor) subunit 1C
mm10_v2_chr10_-_14718191_14718228	0.411821	Nkx3-1	ENSMUST00000020016.4|Gje1|ENSMUSG00000019867.4|gap junction protein, epsilon 1
mm10_v2_chr9_+_105053239_105053259	0.393016	Nkx3-1	ENSMUST00000035177.8|Mrpl3|ENSMUSG00000032563.9|mitochondrial ribosomal protein L3 	ENSMUST00000149243.1|Mrpl3|ENSMUSG00000032563.9|mitochondrial ribosomal protein L3
mm10_v2_chr14_+_47663756_47663756	0.37988	Nkx3-1	ENSMUST00000022391.7|Ktn1|ENSMUSG00000021843.10|kinectin 1
mm10_v2_chr10_+_90576708_90576766	0.370935	Nkx3-1	ENSMUST00000182430.1|Anks1b|ENSMUSG00000058589.8|ankyrin repeat and sterile alpha motif domain containing 1B 	ENSMUST00000182960.1|Anks1b|ENSMUSG00000058589.8|ankyrin repeat and sterile alpha motif domain containing 1B 	ENSMUST00000182045.1|Anks1b|ENSMUSG00000058589.8|ankyrin repeat and sterile alpha motif domain containing 1B 	ENSMUST00000182083.1|Anks1b|ENSMUSG00000058589.8|ankyrin repeat and sterile alpha motif domain containing 1B
mm10_v2_chr11_-_80080928_80081001	0.364222	Nkx3-1	ENSMUST00000103233.3|Crlf3|ENSMUSG00000017561.10|cytokine receptor-like factor 3 	ENSMUST00000061283.8|Crlf3|ENSMUSG00000017561.10|cytokine receptor-like factor 3
mm10_v2_chr10_+_90576252_90576517	0.361305	Nkx3-1	ENSMUST00000182427.1|Anks1b|ENSMUSG00000058589.8|ankyrin repeat and sterile alpha motif domain containing 1B 	ENSMUST00000182053.1|Anks1b|ENSMUSG00000058589.8|ankyrin repeat and sterile alpha motif domain containing 1B 	ENSMUST00000182113.1|Anks1b|ENSMUSG00000058589.8|ankyrin repeat and sterile alpha motif domain containing 1B
mm10_v2_chr7_+_43607169_43607225	0.357669	Nkx3-1	ENSMUST00000120935.1|Zfp819|ENSMUSG00000055102.9|zinc finger protein 819 	ENSMUST00000127765.1|Zfp819|ENSMUSG00000055102.9|zinc finger protein 819 	ENSMUST00000032661.7|Zfp819|ENSMUSG00000055102.9|zinc finger protein 819
mm10_v2_chr8_-_23237623_23237681	0.341597	Nkx3-1	ENSMUST00000033950.5|Gins4|ENSMUSG00000031546.5|GINS complex subunit 4 (Sld5 homolog)
mm10_v2_chr2_+_71873224_71873326	0.341492	Nkx3-1	ENSMUST00000006669.5|Pdk1|ENSMUSG00000006494.5|pyruvate dehydrogenase kinase, isoenzyme 1
mm10_v2_chr7_+_75455534_75455629	0.332749	Nkx3-1	ENSMUST00000147005.1|Akap13|ENSMUSG00000066406.8|A kinase (PRKA) anchor protein 13 	ENSMUST00000166315.1|Akap13|ENSMUSG00000066406.8|A kinase (PRKA) anchor protein 13
mm10_v2_chrX_+_140456613_140456632	0.3223	Nkx3-1	ENSMUST00000033809.3|Prps1|ENSMUSG00000031432.3|phosphoribosyl pyrophosphate synthetase 1
mm10_v2_chrY_+_17874741_17874741	0.316092	Nkx3-1	ENSMUST00000177639.1|Gm20831|ENSMUSG00000094325.1|predicted gene, 20831
mm10_v2_chr9_+_89199319_89199379	0.290822	Nkx3-1	ENSMUST00000138109.1|Mthfs|ENSMUSG00000066442.10|5, 10-methenyltetrahydrofolate synthetase
mm10_v2_chr14_-_54864055_54864158	0.282581	Nkx3-1	ENSMUST00000142283.2|Homez|ENSMUSG00000057156.9|homeodomain leucine zipper-encoding gene
mm10_v2_chr16_+_36934976_36935013	0.271417	Nkx3-1	ENSMUST00000023531.8|Hcls1|ENSMUSG00000022831.8|hematopoietic cell specific Lyn substrate 1
mm10_v2_chr10_+_90576678_90576691	0.270897	Nkx3-1	ENSMUST00000182284.1|Anks1b|ENSMUSG00000058589.8|ankyrin repeat and sterile alpha motif domain containing 1B
mm10_v2_chr7_-_127930066_127930122	0.251869	Nkx3-1	ENSMUST00000032988.8|Prss8|ENSMUSG00000030800.9|protease, serine, 8 (prostasin)
mm10_v2_chr16_+_20535475_20535546	0.248119	Nkx3-1	ENSMUST00000090023.6|Ap2m1|ENSMUSG00000022841.8|adaptor-related protein complex 2, mu 1 subunit 	ENSMUST00000007216.8|Ap2m1|ENSMUSG00000022841.8|adaptor-related protein complex 2, mu 1 subunit
mm10_v2_chr9_+_40873981_40874127	0.242303	Nkx3-1	ENSMUST00000067375.3|Bsx|ENSMUSG00000054360.3|brain specific homeobox
mm10_v2_chr1_-_156034800_156034817	0.236945	Nkx3-1	ENSMUST00000169241.1|Tor1aip1|ENSMUSG00000026466.10|torsin A interacting protein 1
mm10_v2_chr3_+_14863495_14863538	0.231449	Nkx3-1	ENSMUST00000029076.4|Car3|ENSMUSG00000027559.4|carbonic anhydrase 3
mm10_v2_chr12_-_54695829_54695884	0.231324	Nkx3-1	ENSMUST00000162106.1|Eapp|ENSMUSG00000054302.9|E2F-associated phosphoprotein 	ENSMUST00000160085.1|Eapp|ENSMUSG00000054302.9|E2F-associated phosphoprotein 	ENSMUST00000161592.1|Eapp|ENSMUSG00000054302.9|E2F-associated phosphoprotein 	ENSMUST00000163433.1|Eapp|ENSMUSG00000054302.9|E2F-associated phosphoprotein
mm10_v2_chr2_+_132846638_132846708	0.228244	Nkx3-1	ENSMUST00000028835.6|Crls1|ENSMUSG00000027357.10|cardiolipin synthase 1 	ENSMUST00000110122.3|Crls1|ENSMUSG00000027357.10|cardiolipin synthase 1
mm10_v2_chr10_+_90576570_90576668	0.22724	Nkx3-1	ENSMUST00000182786.1|Anks1b|ENSMUSG00000058589.8|ankyrin repeat and sterile alpha motif domain containing 1B 	ENSMUST00000182600.1|Anks1b|ENSMUSG00000058589.8|ankyrin repeat and sterile alpha motif domain containing 1B
mm10_v2_chr18_-_6241486_6241550	0.226126	Nkx3-1	ENSMUST00000025083.7|Kif5b|ENSMUSG00000006740.7|kinesin family member 5B
mm10_v2_chr9_+_78051938_78051958	0.217054	Nkx3-1	ENSMUST00000024104.7|Gcm1|ENSMUSG00000023333.7|glial cells missing homolog 1 (Drosophila)
mm10_v2_chr12_-_54695813_54695828	0.216422	Nkx3-1	ENSMUST00000110713.3|Eapp|ENSMUSG00000054302.9|E2F-associated phosphoprotein
mm10_v2_chr5_-_110046486_110046486	0.216115	Nkx3-1	ENSMUST00000167969.1|Gm17655|ENSMUSG00000090963.1|predicted gene, 17655
mm10_v2_chr14_-_46831984_46832057	0.208424	Nkx3-1	ENSMUST00000181311.1|Gm10101|ENSMUSG00000061510.3|predicted gene 10101 	ENSMUST00000074862.2|Gm10101|ENSMUSG00000061510.3|predicted gene 10101
mm10_v2_chr18_-_42262053_42262140	0.206507	Nkx3-1	ENSMUST00000097590.3|Lars|ENSMUSG00000024493.8|leucyl-tRNA synthetase
mm10_v2_chr7_-_121035096_121035096	0.195544	Nkx3-1	ENSMUST00000065740.2|Gm9905|ENSMUSG00000053358.2|predicted gene 9905
mm10_v2_chrX_+_56454871_56454887	0.181674	Nkx3-1	ENSMUST00000039374.2|Ddx26b|ENSMUSG00000035967.9|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B 	ENSMUST00000101553.2|Ddx26b|ENSMUSG00000035967.9|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B
mm10_v2_chr2_-_153015331_153015427	0.175894	Nkx3-1	ENSMUST00000028972.8|Pdrg1|ENSMUSG00000027472.8|p53 and DNA damage regulated 1
mm10_v2_chr7_-_63938862_63938933	0.166009	Nkx3-1	ENSMUST00000063694.8|Klf13|ENSMUSG00000052040.9|Kruppel-like factor 13
mm10_v2_chr5_+_72914264_72914304	0.1596	Nkx3-1	ENSMUST00000144843.1|Slain2|ENSMUSG00000036087.12|SLAIN motif family, member 2
mm10_v2_chr15_-_52478228_52478228	0.159434	Nkx3-1	ENSMUST00000081993.1|Gm10020|ENSMUSG00000057262.1|predicted pseudogene 10020
mm10_v2_chr19_-_61297069_61297069	0.157728	Nkx3-1	ENSMUST00000179346.1|Gm21060|ENSMUSG00000095993.1|predicted gene, 21060
mm10_v2_chr19_+_8735808_8735864	0.151498	Nkx3-1	ENSMUST00000049424.9|Wdr74|ENSMUSG00000042729.9|WD repeat domain 74
mm10_v2_chr12_+_17266545_17266601	0.147937	Nkx3-1	ENSMUST00000057288.5|Pdia6|ENSMUSG00000020571.6|protein disulfide isomerase associated 6
mm10_v2_chr16_+_20611585_20611635	0.129356	Nkx3-1	ENSMUST00000115522.2|Ece2|ENSMUSG00000022842.10|endothelin converting enzyme 2 	ENSMUST00000119224.1|Ece2|ENSMUSG00000022842.10|endothelin converting enzyme 2 	ENSMUST00000079600.4|Ece2|ENSMUSG00000022842.10|endothelin converting enzyme 2 	ENSMUST00000120394.1|Ece2|ENSMUSG00000022842.10|endothelin converting enzyme 2
mm10_v2_chr1_+_135133272_135133336	0.124577	Nkx3-1	ENSMUST00000167080.1|Ptpn7|ENSMUSG00000031506.5|protein tyrosine phosphatase, non-receptor type 7
mm10_v2_chr15_+_78597047_78597121	0.120459	Nkx3-1	ENSMUST00000043069.5|Cyth4|ENSMUSG00000018008.7|cytohesin 4
mm10_v2_chr7_+_110627650_110627669	0.0920351	Nkx3-1	ENSMUST00000033054.8|Adm|ENSMUSG00000030790.8|adrenomedullin
mm10_v2_chr1_-_174921813_174921827	0.0899983	Nkx3-1	ENSMUST00000055294.3|Grem2|ENSMUSG00000050069.3|gremlin 2 homolog, cysteine knot superfamily (Xenopus laevis)
mm10_v2_chr5_+_8422831_8422906	0.087899	Nkx3-1	ENSMUST00000066921.3|Slc25a40|ENSMUSG00000054099.5|solute carrier family 25, member 40
mm10_v2_chr10_+_90576777_90576815	0.0842035	Nkx3-1	ENSMUST00000183136.1|Anks1b|ENSMUSG00000058589.8|ankyrin repeat and sterile alpha motif domain containing 1B 	ENSMUST00000182595.1|Anks1b|ENSMUSG00000058589.8|ankyrin repeat and sterile alpha motif domain containing 1B
mm10_v2_chr2_+_163994960_163994960	0.0801725	Nkx3-1	ENSMUST00000018470.3|Ywhab|ENSMUSG00000018326.3|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide
mm10_v2_chr13_-_41847482_41847490	0.0800609	Nkx3-1	ENSMUST00000072012.3|Adtrp|ENSMUSG00000058022.7|androgen dependent TFPI regulating protein
mm10_v2_chr17_-_47692466_47692466	0.0676194	Nkx3-1	ENSMUST00000113300.1|Prickle4|ENSMUSG00000096549.3|prickle homolog 4 (Drosophila)
mm10_v2_chr7_-_28598140_28598185	0.0546381	Nkx3-1	ENSMUST00000040531.8|Samd4b|ENSMUSG00000037513.9|sterile alpha motif domain containing 4B 	ENSMUST00000108283.1|Pak4|ENSMUSG00000030602.6|p21 protein (Cdc42/Rac)-activated kinase 4
mm10_v2_chr6_-_69284319_69284319	0.0493681	Nkx3-1	ENSMUST00000103349.1|Igkv4-69|ENSMUSG00000076548.1|immunoglobulin kappa variable 4-69
mm10_v2_chr11_-_17008647_17008702	0.0462119	Nkx3-1	ENSMUST00000102881.3|Plek|ENSMUSG00000020120.9|pleckstrin
mm10_v2_chr6_-_124857707_124857755	0.0429708	Nkx3-1	ENSMUST00000023958.3|Leprel2|ENSMUSG00000023191.3|leprecan-like 2
mm10_v2_chr5_+_28071356_28071372	0.0359355	Nkx3-1	ENSMUST00000059155.10|Insig1|ENSMUSG00000045294.10|insulin induced gene 1
mm10_v2_chr18_-_12862624_12862714	0.0338999	Nkx3-1	ENSMUST00000121808.1|Osbpl1a|ENSMUSG00000044252.11|oxysterol binding protein-like 1A 	ENSMUST00000118313.1|Osbpl1a|ENSMUSG00000044252.11|oxysterol binding protein-like 1A
mm10_v2_chrX_-_111537947_111537964	0.0276585	Nkx3-1	ENSMUST00000132319.1|Rps6ka6|ENSMUSG00000025665.10|ribosomal protein S6 kinase polypeptide 6 	ENSMUST00000123951.1|Rps6ka6|ENSMUSG00000025665.10|ribosomal protein S6 kinase polypeptide 6
mm10_v2_chr19_+_20601958_20601974	0.0239217	Nkx3-1	ENSMUST00000087638.3|Aldh1a1|ENSMUSG00000053279.6|aldehyde dehydrogenase family 1, subfamily A1
mm10_v2_chr5_-_72559599_72559691	0.0125646	Nkx3-1	ENSMUST00000074948.4|Nfxl1|ENSMUSG00000072889.3|nuclear transcription factor, X-box binding-like 1 	ENSMUST00000087216.5|Nfxl1|ENSMUSG00000072889.3|nuclear transcription factor, X-box binding-like 1
