mm10_v2_chr15_-_66831625_66831668	11.0856	Pou5f1	ENSMUST00000164163.1|Sla|ENSMUSG00000022372.8|src-like adaptor
mm10_v2_chr8_-_84773381_84773427	10.6849	Pou5f1	ENSMUST00000109764.1|Nfix|ENSMUSG00000001911.10|nuclear factor I/X
mm10_v2_chr8_+_54954728_54954820	8.77797	Pou5f1	ENSMUST00000033915.7|Gpm6a|ENSMUSG00000031517.7|glycoprotein m6a
mm10_v2_chr4_+_97772734_97772848	8.29701	Pou5f1	ENSMUST00000152023.1|Nfia|ENSMUSG00000028565.12|nuclear factor I/A
mm10_v2_chr14_-_79771305_79771318	8.19379	Pou5f1	ENSMUST00000039568.5|Pcdh8|ENSMUSG00000036422.5|protocadherin 8
mm10_v2_chr6_+_136518820_136518851	8.11385	Pou5f1	ENSMUST00000032335.6|Atf7ip|ENSMUSG00000030213.6|activating transcription factor 7 interacting protein
mm10_v2_chr5_+_129584169_129584232	6.7502	Pou5f1	ENSMUST00000031390.8|Mmp17|ENSMUSG00000029436.8|matrix metallopeptidase 17
mm10_v2_chr7_+_91090697_91090727	6.73766	Pou5f1	ENSMUST00000107196.2|Dlg2|ENSMUSG00000052572.9|discs, large homolog 2 (Drosophila)
mm10_v2_chr7_+_91090728_91090751	6.61113	Pou5f1	ENSMUST00000074273.3|Dlg2|ENSMUSG00000052572.9|discs, large homolog 2 (Drosophila)
mm10_v2_chr11_-_69605829_69605971	6.45703	Pou5f1	ENSMUST00000047889.6|Atp1b2|ENSMUSG00000041329.7|ATPase, Na+/K+ transporting, beta 2 polypeptide
mm10_v2_chr15_-_100599864_100599979	6.31416	Pou5f1	ENSMUST00000177247.2|Pou6f1|ENSMUSG00000009739.10|POU domain, class 6, transcription factor 1 	ENSMUST00000177505.2|Pou6f1|ENSMUSG00000009739.10|POU domain, class 6, transcription factor 1
mm10_v2_chr3_-_80802789_80802840	6.29463	Pou5f1	ENSMUST00000107745.1|Gria2|ENSMUSG00000033981.8|glutamate receptor, ionotropic, AMPA2 (alpha 2) 	ENSMUST00000075316.4|Gria2|ENSMUSG00000033981.8|glutamate receptor, ionotropic, AMPA2 (alpha 2)
mm10_v2_chr5_+_66968559_66968577	6.23694	Pou5f1	ENSMUST00000127184.1|Limch1|ENSMUSG00000037736.12|LIM and calponin homology domains 1
mm10_v2_chr5_+_66968961_66969132	6.19148	Pou5f1	ENSMUST00000132991.1|Limch1|ENSMUSG00000037736.12|LIM and calponin homology domains 1
mm10_v2_chr14_-_102982630_102982645	5.81242	Pou5f1	ENSMUST00000184744.1|KCTD12|ENSMUSG00000098557.1|mmu-mir-5130
mm10_v2_chr14_-_88471396_88471396	5.71683	Pou5f1	ENSMUST00000061628.5|Pcdh20|ENSMUSG00000050505.6|protocadherin 20
mm10_v2_chr12_+_29528382_29528468	5.48259	Pou5f1	ENSMUST00000049784.9|Myt1l|ENSMUSG00000061911.8|myelin transcription factor 1-like
mm10_v2_chr8_+_118283719_118283738	5.059	Pou5f1	ENSMUST00000117160.1|Cdh13|ENSMUSG00000031841.12|cadherin 13
mm10_v2_chr7_-_78578308_78578408	4.97368	Pou5f1	ENSMUST00000039431.7|Ntrk3|ENSMUSG00000059146.6|neurotrophic tyrosine kinase, receptor, type 3
mm10_v2_chr5_+_64812336_64812350	4.89194	Pou5f1	ENSMUST00000166409.1|Klf3|ENSMUSG00000029178.8|Kruppel-like factor 3 (basic)
mm10_v2_chr11_+_57011945_57011956	4.86945	Pou5f1	ENSMUST00000094179.4|Gria1|ENSMUSG00000020524.10|glutamate receptor, ionotropic, AMPA1 (alpha 1)
mm10_v2_chr11_+_57011798_57011827	4.84693	Pou5f1	ENSMUST00000036315.9|Gria1|ENSMUSG00000020524.10|glutamate receptor, ionotropic, AMPA1 (alpha 1)
mm10_v2_chrX_-_103483205_103483225	4.79651	Pou5f1	ENSMUST00000127786.2|Xist|ENSMUSG00000086503.2|inactive X specific transcripts
mm10_v2_chr4_-_82705735_82705754	4.74199	Pou5f1	ENSMUST00000155821.1|Nfib|ENSMUSG00000008575.11|nuclear factor I/B
mm10_v2_chr11_+_98741871_98741894	4.72338	Pou5f1	ENSMUST00000103139.4|Thra|ENSMUSG00000058756.7|thyroid hormone receptor alpha
mm10_v2_chr2_+_124610573_124610613	4.69986	Pou5f1	ENSMUST00000103239.3|Sema6d|ENSMUSG00000027200.11|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D 	ENSMUST00000103240.2|Sema6d|ENSMUSG00000027200.11|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D
mm10_v2_chr13_+_42680565_42680623	4.44745	Pou5f1	ENSMUST00000128646.1|Phactr1|ENSMUSG00000054728.10|phosphatase and actin regulator 1
mm10_v2_chr13_+_97241096_97241116	4.3606	Pou5f1	ENSMUST00000041623.7|Enc1|ENSMUSG00000041773.7|ectodermal-neural cortex 1
mm10_v2_chr5_+_66968416_66968447	4.30442	Pou5f1	ENSMUST00000038188.7|Limch1|ENSMUSG00000037736.12|LIM and calponin homology domains 1
mm10_v2_chr1_-_154725920_154725920	4.24723	Pou5f1	ENSMUST00000004214.8|Cacna1e|ENSMUSG00000004110.8|calcium channel, voltage-dependent, R type, alpha 1E subunit
mm10_v2_chr6_-_13839916_13839942	4.2454	Pou5f1	ENSMUST00000060442.7|Gpr85|ENSMUSG00000048216.7|G protein-coupled receptor 85
mm10_v2_chr10_+_85386813_85386846	4.24528	Pou5f1	ENSMUST00000105307.1|Btbd11|ENSMUSG00000020042.9|BTB (POZ) domain containing 11 	ENSMUST00000020231.3|Btbd11|ENSMUSG00000020042.9|BTB (POZ) domain containing 11
mm10_v2_chr11_+_110399115_110399155	4.23342	Pou5f1	ENSMUST00000020949.5|Map2k6|ENSMUSG00000020623.5|mitogen-activated protein kinase kinase 6 	ENSMUST00000100260.1|Map2k6|ENSMUSG00000020623.5|mitogen-activated protein kinase kinase 6
mm10_v2_chr2_-_66440753_66440846	4.19618	Pou5f1	ENSMUST00000112371.2|Scn1a|ENSMUSG00000064329.7|sodium channel, voltage-gated, type I, alpha 	ENSMUST00000138910.1|Scn1a|ENSMUSG00000064329.7|sodium channel, voltage-gated, type I, alpha
mm10_v2_chr10_-_127620960_127621031	4.16001	Pou5f1	ENSMUST00000121829.1|Lrp1|ENSMUSG00000040249.9|low density lipoprotein receptor-related protein 1
mm10_v2_chr6_+_108213086_108213123	4.10954	Pou5f1	ENSMUST00000032192.6|Itpr1|ENSMUSG00000030102.8|inositol 1,4,5-trisphosphate receptor 1
mm10_v2_chr18_-_42899470_42899643	4.07454	Pou5f1	ENSMUST00000120632.1|Ppp2r2b|ENSMUSG00000024500.12|protein phosphatase 2 (formerly 2A), regulatory subunit B (PR 52), beta isoform
mm10_v2_chr11_+_98741805_98741816	4.05953	Pou5f1	ENSMUST00000064187.5|Thra|ENSMUSG00000058756.7|thyroid hormone receptor alpha
mm10_v2_chr10_+_118860826_118860826	3.99421	Pou5f1	ENSMUST00000059966.4|4932442E05Rik|ENSMUSG00000050709.4|RIKEN cDNA 4932442E05 gene
mm10_v2_chrX_-_95444789_95444872	3.96596	Pou5f1	ENSMUST00000084535.5|Amer1|ENSMUSG00000050332.7|APC membrane recruitment 1
mm10_v2_chr6_+_92092369_92092433	3.93501	Pou5f1	ENSMUST00000113463.1|Nr2c2|ENSMUSG00000005893.8|nuclear receptor subfamily 2, group C, member 2
mm10_v2_chr18_-_42899294_42899317	3.93192	Pou5f1	ENSMUST00000117687.1|Ppp2r2b|ENSMUSG00000024500.12|protein phosphatase 2 (formerly 2A), regulatory subunit B (PR 52), beta isoform
mm10_v2_chr5_+_76840597_76840637	3.91966	Pou5f1	ENSMUST00000120639.2|C530008M17Rik|ENSMUSG00000036377.12|RIKEN cDNA C530008M17 gene 	ENSMUST00000163347.1|C530008M17Rik|ENSMUSG00000036377.12|RIKEN cDNA C530008M17 gene 	ENSMUST00000121851.1|C530008M17Rik|ENSMUSG00000036377.12|RIKEN cDNA C530008M17 gene
mm10_v2_chr7_+_82174796_82174825	3.89783	Pou5f1	ENSMUST00000032874.7|Sh3gl3|ENSMUSG00000030638.7|SH3-domain GRB2-like 3
mm10_v2_chr11_-_98053415_98053467	3.85476	Pou5f1	ENSMUST00000017544.2|Stac2|ENSMUSG00000017400.4|SH3 and cysteine rich domain 2
mm10_v2_chr18_-_43393346_43393381	3.84273	Pou5f1	ENSMUST00000025379.7|Dpysl3|ENSMUSG00000024501.13|dihydropyrimidinase-like 3
mm10_v2_chr11_-_116024489_116024511	3.83355	Pou5f1	ENSMUST00000016703.7|H3f3b|ENSMUSG00000016559.8|H3 histone, family 3B
mm10_v2_chr1_+_177444653_177444669	3.83295	Pou5f1	ENSMUST00000094276.3|Zbtb18|ENSMUSG00000063659.6|zinc finger and BTB domain containing 18
mm10_v2_chr1_-_168431502_168431513	3.76648	Pou5f1	ENSMUST00000064438.4|Pbx1|ENSMUSG00000052534.9|pre B cell leukemia homeobox 1
mm10_v2_chr4_+_144893077_144893103	3.76163	Pou5f1	ENSMUST00000154208.1|Dhrs3|ENSMUSG00000066026.8|dehydrogenase/reductase (SDR family) member 3
mm10_v2_chr15_-_100599983_100600039	3.67712	Pou5f1	ENSMUST00000073837.6|Pou6f1|ENSMUSG00000009739.10|POU domain, class 6, transcription factor 1
mm10_v2_chr4_-_64046925_64047015	3.66752	Pou5f1	ENSMUST00000107377.3|Tnc|ENSMUSG00000028364.9|tenascin C
mm10_v2_chr3_+_13946368_13946379	3.64417	Pou5f1	ENSMUST00000171075.1|Ralyl|ENSMUSG00000039717.9|RALY RNA binding protein-like 	ENSMUST00000108372.2|Ralyl|ENSMUSG00000039717.9|RALY RNA binding protein-like
mm10_v2_chr10_-_127620922_127620943	3.60575	Pou5f1	ENSMUST00000118455.1|Lrp1|ENSMUSG00000040249.9|low density lipoprotein receptor-related protein 1
mm10_v2_chr7_+_87803815_87803815	3.59282	Pou5f1	ENSMUST00000125009.1|Grm5|ENSMUSG00000049583.8|glutamate receptor, metabotropic 5 	ENSMUST00000155358.1|Grm5|ENSMUSG00000049583.8|glutamate receptor, metabotropic 5
mm10_v2_chr1_-_168431695_168431750	3.57339	Pou5f1	ENSMUST00000176790.1|Pbx1|ENSMUSG00000052534.9|pre B cell leukemia homeobox 1
mm10_v2_chr7_+_82175156_82175199	3.52087	Pou5f1	ENSMUST00000180243.1|Sh3gl3|ENSMUSG00000030638.7|SH3-domain GRB2-like 3
mm10_v2_chr18_+_37484955_37485028	3.49507	Pou5f1	ENSMUST00000053856.4|Pcdhb17|ENSMUSG00000046387.4|protocadherin beta 17
mm10_v2_chr3_-_84220853_84220896	3.41112	Pou5f1	ENSMUST00000154152.1|Trim2|ENSMUSG00000027993.10|tripartite motif-containing 2 	ENSMUST00000107693.2|Trim2|ENSMUSG00000027993.10|tripartite motif-containing 2 	ENSMUST00000107695.2|Trim2|ENSMUSG00000027993.10|tripartite motif-containing 2
mm10_v2_chr16_+_23224724_23224804	3.35619	Pou5f1	ENSMUST00000023601.7|St6gal1|ENSMUSG00000022885.9|beta galactoside alpha 2,6 sialyltransferase 1
mm10_v2_chr16_+_91729281_91729390	3.32425	Pou5f1	ENSMUST00000114001.1|Itsn1|ENSMUSG00000022957.13|intersectin 1 (SH3 domain protein 1A) 	ENSMUST00000113999.1|Itsn1|ENSMUSG00000022957.13|intersectin 1 (SH3 domain protein 1A) 	ENSMUST00000064797.5|Itsn1|ENSMUSG00000022957.13|intersectin 1 (SH3 domain protein 1A) 	ENSMUST00000114002.2|Itsn1|ENSMUSG00000022957.13|intersectin 1 (SH3 domain protein 1A) 	ENSMUST00000095909.3|Itsn1|ENSMUSG00000022957.13|intersectin 1 (SH3 domain protein 1A) 	ENSMUST00000056482.7|Itsn1|ENSMUSG00000022957.13|intersectin 1 (SH3 domain protein 1A) 	ENSMUST00000113996.1|Itsn1|ENSMUSG00000022957.13|intersectin 1 (SH3 domain protein 1A)
mm10_v2_chr18_+_69593361_69593450	3.23191	Pou5f1	ENSMUST00000114978.2|Tcf4|ENSMUSG00000053477.9|transcription factor 4 	ENSMUST00000114977.1|Tcf4|ENSMUSG00000053477.9|transcription factor 4
mm10_v2_chr11_+_103103051_103103115	3.2064	Pou5f1	ENSMUST00000152971.1|Acbd4|ENSMUSG00000056938.10|acyl-Coenzyme A binding domain containing 4
mm10_v2_chr10_+_106470281_106470367	3.20353	Pou5f1	ENSMUST00000029404.9|Ppfia2|ENSMUSG00000053825.8|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2 	ENSMUST00000169303.1|Ppfia2|ENSMUSG00000053825.8|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2
mm10_v2_chr4_+_144893127_144893151	3.17431	Pou5f1	ENSMUST00000142808.1|Dhrs3|ENSMUSG00000066026.8|dehydrogenase/reductase (SDR family) member 3
mm10_v2_chr16_+_42907563_42907684	3.08772	Pou5f1	ENSMUST00000151244.1|Zbtb20|ENSMUSG00000022708.10|zinc finger and BTB domain containing 20 	ENSMUST00000114694.2|Zbtb20|ENSMUSG00000022708.10|zinc finger and BTB domain containing 20
mm10_v2_chr1_+_34579693_34579751	3.03641	Pou5f1	ENSMUST00000052670.8|Amer3|ENSMUSG00000045174.8|APC membrane recruitment 3
mm10_v2_chr6_-_138421379_138421452	2.99954	Pou5f1	ENSMUST00000163065.1|Lmo3|ENSMUSG00000030226.6|LIM domain only 3
mm10_v2_chr2_-_33087169_33087253	2.92336	Pou5f1	ENSMUST00000102810.3|Garnl3|ENSMUSG00000038860.9|GTPase activating RANGAP domain-like 3
mm10_v2_chr6_-_136171722_136171849	2.90409	Pou5f1	ENSMUST00000053880.6|Grin2b|ENSMUSG00000030209.8|glutamate receptor, ionotropic, NMDA2B (epsilon 2)
mm10_v2_chr5_+_105732063_105732111	2.88864	Pou5f1	ENSMUST00000154807.1|Lrrc8d|ENSMUSG00000046079.10|leucine rich repeat containing 8D
mm10_v2_chr15_+_57694651_57694686	2.87942	Pou5f1	ENSMUST00000096430.4|Zhx2|ENSMUSG00000071757.4|zinc fingers and homeoboxes 2
mm10_v2_chr2_-_6721890_6721928	2.81919	Pou5f1	ENSMUST00000114927.2|Celf2|ENSMUSG00000002107.12|CUGBP, Elav-like family member 2
mm10_v2_chr4_+_123183722_123183738	2.81637	Pou5f1	ENSMUST00000152194.1|Hpcal4|ENSMUSG00000046093.3|hippocalcin-like 4
mm10_v2_chr1_-_165934900_165935036	2.81479	Pou5f1	ENSMUST00000069609.5|Pou2f1|ENSMUSG00000026565.12|POU domain, class 2, transcription factor 1 	ENSMUST00000111427.2|Pou2f1|ENSMUSG00000026565.12|POU domain, class 2, transcription factor 1 	ENSMUST00000111426.4|Pou2f1|ENSMUSG00000026565.12|POU domain, class 2, transcription factor 1
mm10_v2_chr5_+_105731755_105731798	2.75791	Pou5f1	ENSMUST00000127686.1|Lrrc8d|ENSMUSG00000046079.10|leucine rich repeat containing 8D
mm10_v2_chr1_+_91540553_91540578	2.75522	Pou5f1	ENSMUST00000027538.7|Asb1|ENSMUSG00000026311.10|ankyrin repeat and SOCS box-containing 1
mm10_v2_chr11_+_58954675_58954696	2.74162	Pou5f1	ENSMUST00000108817.3|Hist3h2a|ENSMUSG00000078851.3|histone cluster 3, H2a 	ENSMUST00000047697.5|Trim17|ENSMUSG00000036964.8|tripartite motif-containing 17
mm10_v2_chr2_-_66410064_66410134	2.72066	Pou5f1	ENSMUST00000112366.1|Scn1a|ENSMUSG00000064329.7|sodium channel, voltage-gated, type I, alpha
mm10_v2_chrX_+_93675088_93675161	2.71771	Pou5f1	ENSMUST00000045898.3|Pcyt1b|ENSMUSG00000035246.10|phosphate cytidylyltransferase 1, choline, beta isoform
mm10_v2_chr11_-_30198232_30198261	2.70851	Pou5f1	ENSMUST00000102838.3|Sptbn1|ENSMUSG00000020315.12|spectrin beta, non-erythrocytic 1
mm10_v2_chr2_-_6722187_6722236	2.66122	Pou5f1	ENSMUST00000182657.1|Celf2|ENSMUSG00000002107.12|CUGBP, Elav-like family member 2
mm10_v2_chr5_-_142895233_142895242	2.62531	Pou5f1	ENSMUST00000035985.7|Fbxl18|ENSMUSG00000066640.5|F-box and leucine-rich repeat protein 18
mm10_v2_chr1_-_64121389_64121452	2.60795	Pou5f1	ENSMUST00000055001.3|Klf7|ENSMUSG00000025959.7|Kruppel-like factor 7 (ubiquitous)
mm10_v2_chr17_-_90455872_90456026	2.55392	Pou5f1	ENSMUST00000174337.1|Nrxn1|ENSMUSG00000024109.12|neurexin I 	ENSMUST00000172466.1|Nrxn1|ENSMUSG00000024109.12|neurexin I
mm10_v2_chr17_-_35164891_35164901	2.54352	Pou5f1	ENSMUST00000025253.5|Prrc2a|ENSMUSG00000024393.8|proline-rich coiled-coil 2A
mm10_v2_chr18_+_69346143_69346203	2.49904	Pou5f1	ENSMUST00000114980.1|Tcf4|ENSMUSG00000053477.9|transcription factor 4
mm10_v2_chr10_+_39612934_39612934	2.46749	Pou5f1	ENSMUST00000019987.6|Traf3ip2|ENSMUSG00000019842.6|TRAF3 interacting protein 2
mm10_v2_chr6_-_55681257_55681271	2.39778	Pou5f1	ENSMUST00000044767.8|Neurod6|ENSMUSG00000037984.8|neurogenic differentiation 6
mm10_v2_chr10_+_18469958_18469981	2.39232	Pou5f1	ENSMUST00000162891.1|Nhsl1|ENSMUSG00000039835.9|NHS-like 1 	ENSMUST00000100054.3|Nhsl1|ENSMUSG00000039835.9|NHS-like 1
mm10_v2_chr18_-_79109391_79109510	2.38852	Pou5f1	ENSMUST00000025430.8|Setbp1|ENSMUSG00000024548.9|SET binding protein 1 	ENSMUST00000161465.2|Setbp1|ENSMUSG00000024548.9|SET binding protein 1
mm10_v2_chrX_+_94234594_94234604	2.36624	Pou5f1	ENSMUST00000153900.1|Klhl15|ENSMUSG00000043929.10|kelch-like 15
mm10_v2_chr18_+_65582239_65582275	2.35214	Pou5f1	ENSMUST00000182684.1|Zfp532|ENSMUSG00000042439.6|zinc finger protein 532
mm10_v2_chr19_+_26750939_26750967	2.35099	Pou5f1	ENSMUST00000175953.1|Smarca2|ENSMUSG00000024921.10|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
mm10_v2_chr4_+_102254993_102255003	2.34733	Pou5f1	ENSMUST00000106908.2|Pde4b|ENSMUSG00000028525.10|phosphodiesterase 4B, cAMP specific
mm10_v2_chr2_+_55437100_55437182	2.33373	Pou5f1	ENSMUST00000112633.2|Kcnj3|ENSMUSG00000026824.5|potassium inwardly-rectifying channel, subfamily J, member 3 	ENSMUST00000112632.1|Kcnj3|ENSMUSG00000026824.5|potassium inwardly-rectifying channel, subfamily J, member 3
mm10_v2_chr9_+_21936986_21937070	2.30944	Pou5f1	ENSMUST00000046371.6|BC018242|ENSMUSG00000040563.7|cDNA sequence BC018242
mm10_v2_chr14_-_39472825_39473088	2.30224	Pou5f1	ENSMUST00000168810.2|Nrg3|ENSMUSG00000041014.11|neuregulin 3 	ENSMUST00000173780.1|Nrg3|ENSMUSG00000041014.11|neuregulin 3 	ENSMUST00000166968.2|Nrg3|ENSMUSG00000041014.11|neuregulin 3
mm10_v2_chrX_-_165327376_165327421	2.26435	Pou5f1	ENSMUST00000058787.8|Glra2|ENSMUSG00000018589.8|glycine receptor, alpha 2 subunit
mm10_v2_chr15_+_18818895_18818947	2.24758	Pou5f1	ENSMUST00000166873.2|Cdh10|ENSMUSG00000022321.9|cadherin 10
mm10_v2_chr16_-_91728701_91728802	2.20796	Pou5f1	ENSMUST00000114023.2|Cryzl1|ENSMUSG00000058240.7|crystallin, zeta (quinone reductase)-like 1 	ENSMUST00000117644.1|Cryzl1|ENSMUSG00000058240.7|crystallin, zeta (quinone reductase)-like 1
mm10_v2_chr2_+_155382186_155382274	2.20032	Pou5f1	ENSMUST00000134218.1|Trp53inp2|ENSMUSG00000038375.9|transformation related protein 53 inducible nuclear protein 2
mm10_v2_chr14_-_124677089_124677127	2.17387	Pou5f1	ENSMUST00000095529.3|Fgf14|ENSMUSG00000025551.7|fibroblast growth factor 14
mm10_v2_chr14_+_17660956_17660963	2.16278	Pou5f1	ENSMUST00000022303.7|Thrb|ENSMUSG00000021779.10|thyroid hormone receptor beta 	ENSMUST00000091471.4|Thrb|ENSMUSG00000021779.10|thyroid hormone receptor beta
mm10_v2_chr1_-_25228814_25228834	2.13453	Pou5f1	ENSMUST00000126626.1|Bai3|ENSMUSG00000033569.11|brain-specific angiogenesis inhibitor 3
mm10_v2_chr11_-_98775333_98775354	2.11557	Pou5f1	ENSMUST00000064941.6|Nr1d1|ENSMUSG00000020889.11|nuclear receptor subfamily 1, group D, member 1
mm10_v2_chr9_+_86485407_86485407	2.11176	Pou5f1	ENSMUST00000034987.8|Dopey1|ENSMUSG00000034973.10|dopey family member 1
mm10_v2_chr1_+_66386968_66386999	2.11118	Pou5f1	ENSMUST00000145419.1|Map2|ENSMUSG00000015222.11|microtubule-associated protein 2
mm10_v2_chr1_-_91459254_91459336	2.04957	Pou5f1	ENSMUST00000069620.8|Per2|ENSMUSG00000055866.8|period circadian clock 2
mm10_v2_chr12_-_34528844_34528904	2.04254	Pou5f1	ENSMUST00000110819.2|Hdac9|ENSMUSG00000004698.9|histone deacetylase 9
mm10_v2_chr13_-_41358990_41359006	2.00783	Pou5f1	ENSMUST00000163623.1|Nedd9|ENSMUSG00000021365.8|neural precursor cell expressed, developmentally down-regulated gene 9
mm10_v2_chr13_+_16014457_16014475	1.99968	Pou5f1	ENSMUST00000164993.1|Inhba|ENSMUSG00000041324.7|inhibin beta-A
mm10_v2_chr18_-_37969742_37969782	1.96796	Pou5f1	ENSMUST00000166148.1|Fchsd1|ENSMUSG00000038524.7|FCH and double SH3 domains 1 	ENSMUST00000163131.1|Fchsd1|ENSMUSG00000038524.7|FCH and double SH3 domains 1 	ENSMUST00000043437.7|Fchsd1|ENSMUSG00000038524.7|FCH and double SH3 domains 1
mm10_v2_chr1_-_168432270_168432347	1.95559	Pou5f1	ENSMUST00000072863.4|Pbx1|ENSMUSG00000052534.9|pre B cell leukemia homeobox 1
mm10_v2_chr14_+_70890099_70890130	1.95555	Pou5f1	ENSMUST00000022699.8|Gfra2|ENSMUSG00000022103.9|glial cell line derived neurotrophic factor family receptor alpha 2
mm10_v2_chr1_-_126830632_126830778	1.95207	Pou5f1	ENSMUST00000112583.1|Nckap5|ENSMUSG00000049690.9|NCK-associated protein 5 	ENSMUST00000094609.3|Nckap5|ENSMUSG00000049690.9|NCK-associated protein 5
mm10_v2_chr2_-_45117349_45117395	1.92169	Pou5f1	ENSMUST00000176438.2|Zeb2|ENSMUSG00000026872.10|zinc finger E-box binding homeobox 2
mm10_v2_chr12_+_71048338_71048356	1.90012	Pou5f1	ENSMUST00000135709.1|Arid4a|ENSMUSG00000048118.11|AT rich interactive domain 4A (RBP1-like)
mm10_v2_chr6_+_88724667_88724751	1.89558	Pou5f1	ENSMUST00000163271.1|Mgll|ENSMUSG00000033174.11|monoglyceride lipase
mm10_v2_chr13_+_40917626_40917657	1.878	Pou5f1	ENSMUST00000067778.6|Gcnt2|ENSMUSG00000021360.9|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme
mm10_v2_chr10_-_127621107_127621166	1.87673	Pou5f1	ENSMUST00000049149.8|Lrp1|ENSMUSG00000040249.9|low density lipoprotein receptor-related protein 1
mm10_v2_chrX_+_166344692_166344770	1.85185	Pou5f1	ENSMUST00000112223.1|Gpm6b|ENSMUSG00000031342.11|glycoprotein m6b 	ENSMUST00000112224.1|Gpm6b|ENSMUSG00000031342.11|glycoprotein m6b 	ENSMUST00000112229.2|Gpm6b|ENSMUSG00000031342.11|glycoprotein m6b 	ENSMUST00000112228.1|Gpm6b|ENSMUSG00000031342.11|glycoprotein m6b 	ENSMUST00000112227.2|Gpm6b|ENSMUSG00000031342.11|glycoprotein m6b 	ENSMUST00000112226.2|Gpm6b|ENSMUSG00000031342.11|glycoprotein m6b
mm10_v2_chr2_-_59948155_59948216	1.83672	Pou5f1	ENSMUST00000153136.1|Baz2b|ENSMUSG00000026987.10|bromodomain adjacent to zinc finger domain, 2B
mm10_v2_chr12_-_86988676_86988676	1.82314	Pou5f1	ENSMUST00000095521.2|Zdhhc22|ENSMUSG00000048483.5|zinc finger, DHHC-type containing 22
mm10_v2_chr10_-_64090265_64090297	1.8055	Pou5f1	ENSMUST00000105439.1|Lrrtm3|ENSMUSG00000042846.8|leucine rich repeat transmembrane neuronal 3
mm10_v2_chr18_+_69345721_69345811	1.77218	Pou5f1	ENSMUST00000078486.6|Tcf4|ENSMUSG00000053477.9|transcription factor 4 	ENSMUST00000114982.1|Tcf4|ENSMUSG00000053477.9|transcription factor 4
mm10_v2_chr8_+_120488416_120488490	1.7658	Pou5f1	ENSMUST00000034279.9|Gse1|ENSMUSG00000031822.12|genetic suppressor element 1
mm10_v2_chr1_-_168431896_168431905	1.75496	Pou5f1	ENSMUST00000176540.1|Pbx1|ENSMUSG00000052534.9|pre B cell leukemia homeobox 1
mm10_v2_chr13_-_54688264_54688284	1.75343	Pou5f1	ENSMUST00000150626.1|Rnf44|ENSMUSG00000034928.10|ring finger protein 44 	ENSMUST00000134177.1|Rnf44|ENSMUSG00000034928.10|ring finger protein 44
mm10_v2_chr5_+_111417263_111417442	1.73318	Pou5f1	ENSMUST00000094463.4|Mn1|ENSMUSG00000070576.4|meningioma 1
mm10_v2_chr10_-_64090241_64090262	1.70574	Pou5f1	ENSMUST00000133588.1|Lrrtm3|ENSMUSG00000042846.8|leucine rich repeat transmembrane neuronal 3
mm10_v2_chr2_-_77703252_77703272	1.70206	Pou5f1	ENSMUST00000171063.1|Zfp385b|ENSMUSG00000027016.11|zinc finger protein 385B
mm10_v2_chr8_+_70754679_70754751	1.68819	Pou5f1	ENSMUST00000110093.2|Rab3a|ENSMUSG00000031840.6|RAB3A, member RAS oncogene family 	ENSMUST00000143118.1|Rab3a|ENSMUSG00000031840.6|RAB3A, member RAS oncogene family 	ENSMUST00000034301.5|Rab3a|ENSMUSG00000031840.6|RAB3A, member RAS oncogene family 	ENSMUST00000110090.1|Rab3a|ENSMUSG00000031840.6|RAB3A, member RAS oncogene family
mm10_v2_chr19_+_8941865_8942050	1.6789	Pou5f1	ENSMUST00000096240.2|Mta2|ENSMUSG00000071646.3|metastasis-associated gene family, member 2
mm10_v2_chr2_-_161109017_161109027	1.66369	Pou5f1	ENSMUST00000039782.7|Chd6|ENSMUSG00000057133.8|chromodomain helicase DNA binding protein 6 	ENSMUST00000134178.1|Chd6|ENSMUSG00000057133.8|chromodomain helicase DNA binding protein 6
mm10_v2_chr13_+_23934434_23934462	1.63995	Pou5f1	ENSMUST00000072391.1|Hist1h2aa|ENSMUSG00000060081.1|histone cluster 1, H2aa
mm10_v2_chr6_-_56901870_56901891	1.63909	Pou5f1	ENSMUST00000101367.2|Nt5c3|ENSMUSG00000029780.8|5'-nucleotidase, cytosolic III
mm10_v2_chr16_-_17144415_17144451	1.6268	Pou5f1	ENSMUST00000115709.1|Ccdc116|ENSMUSG00000022768.9|coiled-coil domain containing 116
mm10_v2_chr8_+_70234613_70234628	1.61968	Pou5f1	ENSMUST00000145078.1|Sugp2|ENSMUSG00000036054.9|SURP and G patch domain containing 2
mm10_v2_chr3_-_58885212_58885354	1.60833	Pou5f1	ENSMUST00000055636.6|Clrn1|ENSMUSG00000043850.9|clarin 1 	ENSMUST00000072551.6|Clrn1|ENSMUSG00000043850.9|clarin 1 	ENSMUST00000051408.7|Clrn1|ENSMUSG00000043850.9|clarin 1
mm10_v2_chr13_-_28953690_28953713	1.59314	Pou5f1	ENSMUST00000067230.5|Sox4|ENSMUSG00000076431.4|SRY-box containing gene 4
mm10_v2_chr13_+_40886758_40886818	1.56919	Pou5f1	ENSMUST00000069958.7|Gcnt2|ENSMUSG00000021360.9|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme
mm10_v2_chr7_-_37769624_37769677	1.5623	Pou5f1	ENSMUST00000175941.1|Zfp536|ENSMUSG00000043456.10|zinc finger protein 536
mm10_v2_chr1_-_126830786_126830799	1.56176	Pou5f1	ENSMUST00000162646.1|Nckap5|ENSMUSG00000049690.9|NCK-associated protein 5
mm10_v2_chr8_-_33747724_33747781	1.54241	Pou5f1	ENSMUST00000179364.1|Smim18|ENSMUSG00000094500.1|small integral membrane protein 18
mm10_v2_chr11_-_84068766_84068801	1.54224	Pou5f1	ENSMUST00000018792.5|Dusp14|ENSMUSG00000018648.9|dual specificity phosphatase 14
mm10_v2_chr1_-_66817536_66817600	1.52157	Pou5f1	ENSMUST00000068168.3|Kansl1l|ENSMUSG00000026004.9|KAT8 regulatory NSL complex subunit 1-like 	ENSMUST00000113987.1|Kansl1l|ENSMUSG00000026004.9|KAT8 regulatory NSL complex subunit 1-like
mm10_v2_chr5_+_13399309_13399382	1.51543	Pou5f1	ENSMUST00000030714.7|Sema3a|ENSMUSG00000028883.11|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A 	ENSMUST00000141968.1|Sema3a|ENSMUSG00000028883.11|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A
mm10_v2_chr14_+_45219993_45219993	1.50708	Pou5f1	ENSMUST00000146150.1|Gpr137c|ENSMUSG00000049092.10|G protein-coupled receptor 137C
mm10_v2_chr16_-_4880284_4880315	1.48793	Pou5f1	ENSMUST00000037843.6|Ubald1|ENSMUSG00000039568.6|UBA-like domain containing 1
mm10_v2_chr16_-_91728599_91728637	1.47922	Pou5f1	ENSMUST00000122254.1|Cryzl1|ENSMUSG00000058240.7|crystallin, zeta (quinone reductase)-like 1
mm10_v2_chr8_-_70234401_70234466	1.47879	Pou5f1	ENSMUST00000019679.5|Armc6|ENSMUSG00000002343.5|armadillo repeat containing 6
mm10_v2_chr9_-_102354685_102354699	1.46344	Pou5f1	ENSMUST00000035129.7|Ephb1|ENSMUSG00000032537.8|Eph receptor B1 	ENSMUST00000085169.5|Ephb1|ENSMUSG00000032537.8|Eph receptor B1
mm10_v2_chr7_-_28372597_28372610	1.46032	Pou5f1	ENSMUST00000144700.1|Plekhg2|ENSMUSG00000037552.11|pleckstrin homology domain containing, family G (with RhoGef domain) member 2
mm10_v2_chr16_-_91728975_91729092	1.4569	Pou5f1	ENSMUST00000073466.6|Cryzl1|ENSMUSG00000058240.7|crystallin, zeta (quinone reductase)-like 1
mm10_v2_chr13_-_54688246_54688263	1.42996	Pou5f1	ENSMUST00000122935.1|Rnf44|ENSMUSG00000034928.10|ring finger protein 44 	ENSMUST00000128257.1|Rnf44|ENSMUSG00000034928.10|ring finger protein 44
mm10_v2_chr2_-_18048784_18048822	1.42598	Pou5f1	ENSMUST00000142856.1|Skida1|ENSMUSG00000054074.9|SKI/DACH domain containing 1
mm10_v2_chr5_-_122989086_122989111	1.42476	Pou5f1	ENSMUST00000046073.9|Kdm2b|ENSMUSG00000029475.11|lysine (K)-specific demethylase 2B
mm10_v2_chr7_+_126776939_126777213	1.42274	Pou5f1	ENSMUST00000038614.5|Ypel3|ENSMUSG00000042675.9|yippee-like 3 (Drosophila) 	ENSMUST00000170882.1|Ypel3|ENSMUSG00000042675.9|yippee-like 3 (Drosophila) 	ENSMUST00000106359.1|Ypel3|ENSMUSG00000042675.9|yippee-like 3 (Drosophila) 	ENSMUST00000106357.1|Ypel3|ENSMUSG00000042675.9|yippee-like 3 (Drosophila) 	ENSMUST00000145762.1|Ypel3|ENSMUSG00000042675.9|yippee-like 3 (Drosophila) 	ENSMUST00000132643.1|Ypel3|ENSMUSG00000042675.9|yippee-like 3 (Drosophila) 	ENSMUST00000106356.1|Ypel3|ENSMUSG00000042675.9|yippee-like 3 (Drosophila)
mm10_v2_chr4_-_62360524_62360552	1.42203	Pou5f1	ENSMUST00000107461.1|Fkbp15|ENSMUSG00000066151.5|FK506 binding protein 15 	ENSMUST00000084528.3|Fkbp15|ENSMUSG00000066151.5|FK506 binding protein 15
mm10_v2_chr9_-_71896047_71896102	1.39723	Pou5f1	ENSMUST00000184448.1|Tcf12|ENSMUSG00000032228.10|transcription factor 12
mm10_v2_chr18_+_65582281_65582310	1.38118	Pou5f1	ENSMUST00000183319.1|Zfp532|ENSMUSG00000042439.6|zinc finger protein 532
mm10_v2_chr2_-_180273488_180273502	1.3807	Pou5f1	ENSMUST00000108891.1|Cables2|ENSMUSG00000038990.8|CDK5 and Abl enzyme substrate 2
mm10_v2_chr5_+_123015010_123015118	1.3773	Pou5f1	ENSMUST00000121652.1|Orai1|ENSMUSG00000049686.8|ORAI calcium release-activated calcium modulator 1 	ENSMUST00000051016.4|Orai1|ENSMUSG00000049686.8|ORAI calcium release-activated calcium modulator 1
mm10_v2_chr16_+_17144600_17144622	1.36856	Pou5f1	ENSMUST00000115702.1|Ydjc|ENSMUSG00000041774.8|YdjC homolog (bacterial)
mm10_v2_chr8_-_70234097_70234160	1.3668	Pou5f1	ENSMUST00000130319.1|Armc6|ENSMUSG00000002343.5|armadillo repeat containing 6
mm10_v2_chr10_-_79908891_79908936	1.36102	Pou5f1	ENSMUST00000165684.1|Med16|ENSMUSG00000013833.9|mediator complex subunit 16 	ENSMUST00000164705.1|Med16|ENSMUSG00000013833.9|mediator complex subunit 16 	ENSMUST00000105378.2|Med16|ENSMUSG00000013833.9|mediator complex subunit 16 	ENSMUST00000170409.1|Med16|ENSMUSG00000013833.9|mediator complex subunit 16
mm10_v2_chr4_+_152039315_152039356	1.36037	Pou5f1	ENSMUST00000084116.6|Nol9|ENSMUSG00000028948.10|nucleolar protein 9 	ENSMUST00000105663.1|Nol9|ENSMUSG00000028948.10|nucleolar protein 9 	ENSMUST00000103197.3|Nol9|ENSMUSG00000028948.10|nucleolar protein 9
mm10_v2_chr3_-_61365951_61365951	1.34758	Pou5f1	ENSMUST00000066298.2|B430305J03Rik|ENSMUSG00000053706.2|RIKEN cDNA B430305J03 gene
mm10_v2_chr19_-_37176055_37176078	1.34649	Pou5f1	ENSMUST00000142973.1|Cpeb3|ENSMUSG00000039652.10|cytoplasmic polyadenylation element binding protein 3 	ENSMUST00000154376.1|Cpeb3|ENSMUSG00000039652.10|cytoplasmic polyadenylation element binding protein 3
mm10_v2_chr3_-_144202300_144202345	1.32427	Pou5f1	ENSMUST00000121796.1|Lmo4|ENSMUSG00000028266.11|LIM domain only 4 	ENSMUST00000121112.1|Lmo4|ENSMUSG00000028266.11|LIM domain only 4
mm10_v2_chr18_+_65582390_65582613	1.32386	Pou5f1	ENSMUST00000169679.1|Zfp532|ENSMUSG00000042439.6|zinc finger protein 532 	ENSMUST00000183326.1|Zfp532|ENSMUSG00000042439.6|zinc finger protein 532
mm10_v2_chr9_+_14276301_14276347	1.31935	Pou5f1	ENSMUST00000034507.7|Sesn3|ENSMUSG00000032009.7|sestrin 3
mm10_v2_chr5_-_122988533_122988705	1.31042	Pou5f1	ENSMUST00000086200.4|Kdm2b|ENSMUSG00000029475.11|lysine (K)-specific demethylase 2B 	ENSMUST00000156474.1|Kdm2b|ENSMUSG00000029475.11|lysine (K)-specific demethylase 2B
mm10_v2_chr9_+_59578192_59578337	1.30893	Pou5f1	ENSMUST00000118549.1|Celf6|ENSMUSG00000032297.5|CUGBP, Elav-like family member 6 	ENSMUST00000034840.3|Celf6|ENSMUSG00000032297.5|CUGBP, Elav-like family member 6
mm10_v2_chr10_-_115362191_115362262	1.30811	Pou5f1	ENSMUST00000092170.5|Tmem19|ENSMUSG00000069520.5|transmembrane protein 19
mm10_v2_chr18_+_69344503_69344530	1.29058	Pou5f1	ENSMUST00000114985.3|Tcf4|ENSMUSG00000053477.9|transcription factor 4
mm10_v2_chr12_-_79192248_79192293	1.26831	Pou5f1	ENSMUST00000161204.1|Rdh11|ENSMUSG00000066441.8|retinol dehydrogenase 11
mm10_v2_chr14_+_13453937_13453958	1.25471	Pou5f1	ENSMUST00000153954.1|Synpr|ENSMUSG00000056296.10|synaptoporin
mm10_v2_chr16_-_23225334_23225368	1.23655	Pou5f1	ENSMUST00000055369.4|BC106179|ENSMUSG00000045231.4|cDNA sequence BC106179
mm10_v2_chr6_-_30304513_30304570	1.23416	Pou5f1	ENSMUST00000094543.2|Ube2h|ENSMUSG00000039159.10|ubiquitin-conjugating enzyme E2H 	ENSMUST00000102993.3|Ube2h|ENSMUSG00000039159.10|ubiquitin-conjugating enzyme E2H
mm10_v2_chr2_+_155381808_155381884	1.21906	Pou5f1	ENSMUST00000043237.7|Trp53inp2|ENSMUSG00000038375.9|transformation related protein 53 inducible nuclear protein 2 	ENSMUST00000174685.1|Trp53inp2|ENSMUSG00000038375.9|transformation related protein 53 inducible nuclear protein 2
mm10_v2_chr1_-_64121456_64121491	1.19296	Pou5f1	ENSMUST00000142009.1|Klf7|ENSMUSG00000025959.7|Kruppel-like factor 7 (ubiquitous) 	ENSMUST00000114086.1|Klf7|ENSMUSG00000025959.7|Kruppel-like factor 7 (ubiquitous)
mm10_v2_chr17_-_46556158_46556188	1.16491	Pou5f1	ENSMUST00000015749.5|Srf|ENSMUSG00000015605.5|serum response factor
mm10_v2_chr8_+_31150307_31150346	1.15228	Pou5f1	ENSMUST00000098842.2|Tti2|ENSMUSG00000031577.9|TELO2 interacting protein 2
mm10_v2_chr7_+_107370728_107370848	1.13074	Pou5f1	ENSMUST00000137663.1|Syt9|ENSMUSG00000062542.5|synaptotagmin IX 	ENSMUST00000073459.5|Syt9|ENSMUSG00000062542.5|synaptotagmin IX
mm10_v2_chr16_-_22439570_22439603	1.12674	Pou5f1	ENSMUST00000170393.1|Etv5|ENSMUSG00000013089.9|ets variant gene 5
mm10_v2_chr9_-_107710475_107710475	1.11839	Pou5f1	ENSMUST00000080560.3|Sema3f|ENSMUSG00000034684.7|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3F
mm10_v2_chr17_-_35909626_35909700	1.11353	Pou5f1	ENSMUST00000141132.1|Atat1|ENSMUSG00000024426.11|alpha tubulin acetyltransferase 1
mm10_v2_chr11_-_84069179_84069261	1.09043	Pou5f1	ENSMUST00000138208.1|Dusp14|ENSMUSG00000018648.9|dual specificity phosphatase 14
mm10_v2_chr11_+_74830920_74831005	1.08857	Pou5f1	ENSMUST00000000291.2|Mnt|ENSMUSG00000000282.6|max binding protein
mm10_v2_chr12_+_52699297_52699411	1.08031	Pou5f1	ENSMUST00000095737.3|Akap6|ENSMUSG00000061603.7|A kinase (PRKA) anchor protein 6
mm10_v2_chr2_-_120539852_120539866	1.0772	Pou5f1	ENSMUST00000171215.1|Zfp106|ENSMUSG00000027288.10|zinc finger protein 106
mm10_v2_chr18_-_80151467_80151517	1.07579	Pou5f1	ENSMUST00000066743.9|Adnp2|ENSMUSG00000053950.9|ADNP homeobox 2
mm10_v2_chr3_-_95015416_95015462	1.05502	Pou5f1	ENSMUST00000132195.1|Zfp687|ENSMUSG00000019338.7|zinc finger protein 687
mm10_v2_chr15_+_82147238_82147275	1.04804	Pou5f1	ENSMUST00000023100.6|Srebf2|ENSMUSG00000022463.7|sterol regulatory element binding factor 2
mm10_v2_chr11_-_100527862_100527878	1.04284	Pou5f1	ENSMUST00000107385.1|Acly|ENSMUSG00000020917.11|ATP citrate lyase
mm10_v2_chr18_+_52767994_52768149	1.03473	Pou5f1	ENSMUST00000025413.7|Sncaip|ENSMUSG00000024534.9|synuclein, alpha interacting protein (synphilin) 	ENSMUST00000163742.2|Sncaip|ENSMUSG00000024534.9|synuclein, alpha interacting protein (synphilin) 	ENSMUST00000178011.1|Sncaip|ENSMUSG00000024534.9|synuclein, alpha interacting protein (synphilin)
mm10_v2_chr19_-_6921804_6921834	1.01803	Pou5f1	ENSMUST00000025906.4|Esrra|ENSMUSG00000024955.7|estrogen related receptor, alpha
mm10_v2_chr1_+_140246216_140246226	1.00029	Pou5f1	ENSMUST00000119786.1|Kcnt2|ENSMUSG00000052726.9|potassium channel, subfamily T, member 2 	ENSMUST00000120796.1|Kcnt2|ENSMUSG00000052726.9|potassium channel, subfamily T, member 2 	ENSMUST00000060201.8|Kcnt2|ENSMUSG00000052726.9|potassium channel, subfamily T, member 2 	ENSMUST00000120709.1|Kcnt2|ENSMUSG00000052726.9|potassium channel, subfamily T, member 2
mm10_v2_chr1_+_93235836_93235842	0.993729	Pou5f1	ENSMUST00000062202.7|Sned1|ENSMUSG00000047793.7|sushi, nidogen and EGF-like domains 1
mm10_v2_chr9_+_44773191_44773263	0.973352	Pou5f1	ENSMUST00000147559.1|Ift46|ENSMUSG00000002031.5|intraflagellar transport 46
mm10_v2_chr19_-_41206774_41206898	0.944612	Pou5f1	ENSMUST00000025986.7|Tll2|ENSMUSG00000025013.8|tolloid-like 2 	ENSMUST00000169941.1|Tll2|ENSMUSG00000025013.8|tolloid-like 2
mm10_v2_chr5_-_115652974_115652992	0.942456	Pou5f1	ENSMUST00000121746.1|Ccdc64|ENSMUSG00000041609.10|coiled-coil domain containing 64 	ENSMUST00000118576.1|Ccdc64|ENSMUSG00000041609.10|coiled-coil domain containing 64
mm10_v2_chr4_-_62360436_62360511	0.921908	Pou5f1	ENSMUST00000084527.3|Fkbp15|ENSMUSG00000066151.5|FK506 binding protein 15 	ENSMUST00000098033.3|Fkbp15|ENSMUSG00000066151.5|FK506 binding protein 15
mm10_v2_chr6_-_30693676_30693749	0.908042	Pou5f1	ENSMUST00000169422.1|Cep41|ENSMUSG00000029790.10|centrosomal protein 41 	ENSMUST00000115131.1|Cep41|ENSMUSG00000029790.10|centrosomal protein 41 	ENSMUST00000115130.2|Cep41|ENSMUSG00000029790.10|centrosomal protein 41 	ENSMUST00000031810.8|Cep41|ENSMUSG00000029790.10|centrosomal protein 41
mm10_v2_chr8_+_70234187_70234233	0.877668	Pou5f1	ENSMUST00000164403.1|Sugp2|ENSMUSG00000036054.9|SURP and G patch domain containing 2 	ENSMUST00000093458.4|Sugp2|ENSMUSG00000036054.9|SURP and G patch domain containing 2
mm10_v2_chr2_+_28192971_28192992	0.865625	Pou5f1	ENSMUST00000113920.1|Olfm1|ENSMUSG00000026833.12|olfactomedin 1
mm10_v2_chr6_-_92481343_92481405	0.863379	Pou5f1	ENSMUST00000113445.1|Prickle2|ENSMUSG00000030020.7|prickle homolog 2 (Drosophila)
mm10_v2_chr1_-_190169399_190169526	0.84965	Pou5f1	ENSMUST00000010319.7|Prox1|ENSMUSG00000010175.7|prospero-related homeobox 1
mm10_v2_chr15_+_12824815_12824833	0.839223	Pou5f1	ENSMUST00000169061.1|Drosha|ENSMUSG00000022191.9|drosha, ribonuclease type III
mm10_v2_chr19_+_6400523_6400583	0.828648	Pou5f1	ENSMUST00000146831.1|Rasgrp2|ENSMUSG00000032946.10|RAS, guanyl releasing protein 2 	ENSMUST00000035716.8|Rasgrp2|ENSMUSG00000032946.10|RAS, guanyl releasing protein 2 	ENSMUST00000138555.1|Rasgrp2|ENSMUSG00000032946.10|RAS, guanyl releasing protein 2 	ENSMUST00000167240.1|Rasgrp2|ENSMUSG00000032946.10|RAS, guanyl releasing protein 2
mm10_v2_chr17_-_91092715_91092822	0.816267	Pou5f1	ENSMUST00000160800.2|Nrxn1|ENSMUSG00000024109.12|neurexin I 	ENSMUST00000159778.1|Nrxn1|ENSMUSG00000024109.12|neurexin I 	ENSMUST00000160844.3|Nrxn1|ENSMUSG00000024109.12|neurexin I
mm10_v2_chr5_+_138085083_138085147	0.805605	Pou5f1	ENSMUST00000019660.4|Zkscan1|ENSMUSG00000029729.6|zinc finger with KRAB and SCAN domains 1 	ENSMUST00000066617.5|Zkscan1|ENSMUSG00000029729.6|zinc finger with KRAB and SCAN domains 1 	ENSMUST00000110963.1|Zkscan1|ENSMUSG00000029729.6|zinc finger with KRAB and SCAN domains 1
mm10_v2_chr4_-_129623870_129623947	0.798113	Pou5f1	ENSMUST00000106035.1|Ccdc28b|ENSMUSG00000028795.9|coiled coil domain containing 28B 	ENSMUST00000150357.1|Ccdc28b|ENSMUSG00000028795.9|coiled coil domain containing 28B 	ENSMUST00000030586.8|Ccdc28b|ENSMUSG00000028795.9|coiled coil domain containing 28B
mm10_v2_chr5_-_148928619_148928659	0.79292	Pou5f1	ENSMUST00000149169.1|Katnal1|ENSMUSG00000041298.9|katanin p60 subunit A-like 1 	ENSMUST00000047257.8|Katnal1|ENSMUSG00000041298.9|katanin p60 subunit A-like 1
mm10_v2_chr14_-_59597836_59597904	0.792154	Pou5f1	ENSMUST00000167100.1|Cdadc1|ENSMUSG00000021982.7|cytidine and dCMP deaminase domain containing 1 	ENSMUST00000022555.4|Cdadc1|ENSMUSG00000021982.7|cytidine and dCMP deaminase domain containing 1 	ENSMUST00000056997.7|Cdadc1|ENSMUSG00000021982.7|cytidine and dCMP deaminase domain containing 1 	ENSMUST00000171683.1|Cdadc1|ENSMUSG00000021982.7|cytidine and dCMP deaminase domain containing 1
mm10_v2_chr6_+_88724828_88724924	0.773682	Pou5f1	ENSMUST00000089449.2|Mgll|ENSMUSG00000033174.11|monoglyceride lipase
mm10_v2_chr7_-_28372494_28372519	0.768042	Pou5f1	ENSMUST00000119990.1|Plekhg2|ENSMUSG00000037552.11|pleckstrin homology domain containing, family G (with RhoGef domain) member 2
mm10_v2_chr11_-_84067063_84067095	0.737312	Pou5f1	ENSMUST00000108101.1|Dusp14|ENSMUSG00000018648.9|dual specificity phosphatase 14
mm10_v2_chr15_+_12824841_12824883	0.733735	Pou5f1	ENSMUST00000090292.5|Drosha|ENSMUSG00000022191.9|drosha, ribonuclease type III
mm10_v2_chr6_+_17491216_17491242	0.710849	Pou5f1	ENSMUST00000080469.5|Met|ENSMUSG00000009376.9|met proto-oncogene
mm10_v2_chr4_+_108479081_108479224	0.70174	Pou5f1	ENSMUST00000155068.1|Zcchc11|ENSMUSG00000034610.8|zinc finger, CCHC domain containing 11
mm10_v2_chr19_-_6921753_6921803	0.691034	Pou5f1	ENSMUST00000173635.1|Esrra|ENSMUSG00000024955.7|estrogen related receptor, alpha
mm10_v2_chr10_-_117746356_117746418	0.674469	Pou5f1	ENSMUST00000079041.5|Slc35e3|ENSMUSG00000060181.5|solute carrier family 35, member E3
mm10_v2_chr3_-_10440054_10440127	0.669551	Pou5f1	ENSMUST00000099223.4|Snx16|ENSMUSG00000027534.10|sorting nexin 16 	ENSMUST00000029047.6|Snx16|ENSMUSG00000027534.10|sorting nexin 16
mm10_v2_chr2_+_57238297_57238459	0.663253	Pou5f1	ENSMUST00000112618.2|Gpd2|ENSMUSG00000026827.6|glycerol phosphate dehydrogenase 2, mitochondrial 	ENSMUST00000028167.2|Gpd2|ENSMUSG00000026827.6|glycerol phosphate dehydrogenase 2, mitochondrial
mm10_v2_chr3_+_45378396_45378413	0.663097	Pou5f1	ENSMUST00000166126.1|Pcdh10|ENSMUSG00000049100.9|protocadherin 10 	ENSMUST00000170695.1|Pcdh10|ENSMUSG00000049100.9|protocadherin 10 	ENSMUST00000171554.1|Pcdh10|ENSMUSG00000049100.9|protocadherin 10
mm10_v2_chr9_+_13765970_13766043	0.662842	Pou5f1	ENSMUST00000152532.1|Mtmr2|ENSMUSG00000031918.10|myotubularin related protein 2
mm10_v2_chr7_+_19228334_19228416	0.643427	Pou5f1	ENSMUST00000063976.8|Opa3|ENSMUSG00000052214.8|optic atrophy 3
mm10_v2_chr12_+_111039334_111039400	0.626403	Pou5f1	ENSMUST00000084968.7|Rcor1|ENSMUSG00000037896.11|REST corepressor 1
mm10_v2_chr4_-_152477433_152477549	0.59257	Pou5f1	ENSMUST00000159186.1|Kcnab2|ENSMUSG00000028931.5|potassium voltage-gated channel, shaker-related subfamily, beta member 2 	ENSMUST00000162017.1|Kcnab2|ENSMUSG00000028931.5|potassium voltage-gated channel, shaker-related subfamily, beta member 2 	ENSMUST00000030768.2|Kcnab2|ENSMUSG00000028931.5|potassium voltage-gated channel, shaker-related subfamily, beta member 2
mm10_v2_chr9_+_86743616_86743638	0.582622	Pou5f1	ENSMUST00000036426.6|Prss35|ENSMUSG00000033491.7|protease, serine, 35
mm10_v2_chr1_-_132390301_132390373	0.572586	Pou5f1	ENSMUST00000132435.1|Tmcc2|ENSMUSG00000042066.9|transmembrane and coiled-coil domains 2
mm10_v2_chr7_-_37772868_37772891	0.570271	Pou5f1	ENSMUST00000176205.1|Zfp536|ENSMUSG00000043456.10|zinc finger protein 536
mm10_v2_chr8_+_76902277_76902476	0.569625	Pou5f1	ENSMUST00000109912.1|Nr3c2|ENSMUSG00000031618.7|nuclear receptor subfamily 3, group C, member 2 	ENSMUST00000128862.1|Nr3c2|ENSMUSG00000031618.7|nuclear receptor subfamily 3, group C, member 2 	ENSMUST00000109911.1|Nr3c2|ENSMUSG00000031618.7|nuclear receptor subfamily 3, group C, member 2
mm10_v2_chr9_+_120929216_120929251	0.56638	Pou5f1	ENSMUST00000130466.1|Ctnnb1|ENSMUSG00000006932.10|catenin (cadherin associated protein), beta 1
mm10_v2_chr3_+_76075583_76075583	0.565571	Pou5f1	ENSMUST00000160261.1|Fstl5|ENSMUSG00000034098.8|follistatin-like 5
mm10_v2_chr6_-_29216277_29216292	0.564321	Pou5f1	ENSMUST00000162215.1|Impdh1|ENSMUSG00000003500.7|inosine 5'-phosphate dehydrogenase 1
mm10_v2_chr7_+_130692532_130692575	0.56078	Pou5f1	ENSMUST00000033141.6|Tacc2|ENSMUSG00000030852.9|transforming, acidic coiled-coil containing protein 2
mm10_v2_chr19_-_37178011_37178048	0.526722	Pou5f1	ENSMUST00000133988.1|Cpeb3|ENSMUSG00000039652.10|cytoplasmic polyadenylation element binding protein 3
mm10_v2_chr2_-_76215363_76215405	0.526411	Pou5f1	ENSMUST00000144892.1|Pde11a|ENSMUSG00000075270.5|phosphodiesterase 11A
mm10_v2_chr17_-_28486082_28486149	0.525372	Pou5f1	ENSMUST00000079413.3|Fkbp5|ENSMUSG00000024222.10|FK506 binding protein 5
mm10_v2_chr5_-_31291026_31291143	0.525014	Pou5f1	ENSMUST00000041565.7|Ift172|ENSMUSG00000038564.7|intraflagellar transport 172
mm10_v2_chr10_+_81137953_81137992	0.508247	Pou5f1	ENSMUST00000117956.1|Zbtb7a|ENSMUSG00000035011.9|zinc finger and BTB domain containing 7a
mm10_v2_chr6_+_3498382_3498439	0.506544	Pou5f1	ENSMUST00000001412.10|Ccdc132|ENSMUSG00000001376.11|coiled-coil domain containing 132 	ENSMUST00000170873.3|Ccdc132|ENSMUSG00000001376.11|coiled-coil domain containing 132 	ENSMUST00000184752.1|Ccdc132|ENSMUSG00000001376.11|coiled-coil domain containing 132 	ENSMUST00000164052.3|Ccdc132|ENSMUSG00000001376.11|coiled-coil domain containing 132
mm10_v2_chr10_-_25200110_25200178	0.483442	Pou5f1	ENSMUST00000100012.2|Akap7|ENSMUSG00000039166.9|A kinase (PRKA) anchor protein 7
mm10_v2_chr6_-_148946146_148946182	0.465573	Pou5f1	ENSMUST00000132696.1|Fam60a|ENSMUSG00000039985.8|family with sequence similarity 60, member A
mm10_v2_chr4_+_43562672_43562947	0.460942	Pou5f1	ENSMUST00000167751.1|Creb3|ENSMUSG00000028466.9|cAMP responsive element binding protein 3 	ENSMUST00000132631.1|Creb3|ENSMUSG00000028466.9|cAMP responsive element binding protein 3
mm10_v2_chr4_+_97777606_97777632	0.452678	Pou5f1	ENSMUST00000075448.6|Nfia|ENSMUSG00000028565.12|nuclear factor I/A 	ENSMUST00000092532.6|Nfia|ENSMUSG00000028565.12|nuclear factor I/A
mm10_v2_chr15_+_75862310_75862370	0.446878	Pou5f1	ENSMUST00000023238.4|Gsdmd|ENSMUSG00000022575.4|gasdermin D
mm10_v2_chr2_-_170194033_170194064	0.445646	Pou5f1	ENSMUST00000180625.1|Gm17619|ENSMUSG00000097514.1|predicted gene, 17619
mm10_v2_chr2_-_165884636_165884874	0.424519	Pou5f1	ENSMUST00000177633.1|Zmynd8|ENSMUSG00000039671.12|zinc finger, MYND-type containing 8 	ENSMUST00000018050.7|Zmynd8|ENSMUSG00000039671.12|zinc finger, MYND-type containing 8 	ENSMUST00000088113.4|Zmynd8|ENSMUSG00000039671.12|zinc finger, MYND-type containing 8
mm10_v2_chr2_-_38926217_38926454	0.415863	Pou5f1	ENSMUST00000076275.4|Nr6a1|ENSMUSG00000063972.7|nuclear receptor subfamily 6, group A, member 1 	ENSMUST00000142130.1|Nr6a1|ENSMUSG00000063972.7|nuclear receptor subfamily 6, group A, member 1
mm10_v2_chr14_+_13454010_13454123	0.410704	Pou5f1	ENSMUST00000112656.2|Synpr|ENSMUSG00000056296.10|synaptoporin
mm10_v2_chr11_-_3504766_3504833	0.40739	Pou5f1	ENSMUST00000044507.5|Inpp5j|ENSMUSG00000034570.6|inositol polyphosphate 5-phosphatase J
mm10_v2_chr1_+_42952872_42952983	0.399998	Pou5f1	ENSMUST00000179766.1|Gpr45|ENSMUSG00000041907.8|G protein-coupled receptor 45
mm10_v2_chr3_+_95282897_95282944	0.396525	Pou5f1	ENSMUST00000039537.7|Fam63a|ENSMUSG00000038712.10|family with sequence similarity 63, member A 	ENSMUST00000107187.2|Fam63a|ENSMUSG00000038712.10|family with sequence similarity 63, member A
mm10_v2_chr7_+_29071597_29071613	0.388807	Pou5f1	ENSMUST00000180926.1|Gm26604|ENSMUSG00000097079.1|predicted gene, 26604
mm10_v2_chr5_-_115484297_115484387	0.374116	Pou5f1	ENSMUST00000112067.1|Sirt4|ENSMUSG00000029524.10|sirtuin 4
mm10_v2_chr2_+_72054598_72054640	0.358363	Pou5f1	ENSMUST00000028525.5|Rapgef4|ENSMUSG00000049044.10|Rap guanine nucleotide exchange factor (GEF) 4
mm10_v2_chr3_+_94974831_94974964	0.355098	Pou5f1	ENSMUST00000167008.1|Pi4kb|ENSMUSG00000038861.8|phosphatidylinositol 4-kinase, catalytic, beta polypeptide 	ENSMUST00000107251.2|Pi4kb|ENSMUSG00000038861.8|phosphatidylinositol 4-kinase, catalytic, beta polypeptide
mm10_v2_chr1_+_36471590_36471620	0.353939	Pou5f1	ENSMUST00000153128.1|Cnnm4|ENSMUSG00000037408.9|cyclin M4
mm10_v2_chr3_+_96221111_96221134	0.327399	Pou5f1	ENSMUST00000090781.6|Hist2h2be|ENSMUSG00000068854.6|histone cluster 2, H2be
mm10_v2_chr6_+_136954521_136954529	0.310399	Pou5f1	ENSMUST00000137768.1|Pde6h|ENSMUSG00000064330.7|phosphodiesterase 6H, cGMP-specific, cone, gamma
mm10_v2_chr4_+_123183456_123183601	0.298231	Pou5f1	ENSMUST00000126995.1|Hpcal4|ENSMUSG00000046093.3|hippocalcin-like 4
mm10_v2_chr5_+_21372642_21372714	0.295207	Pou5f1	ENSMUST00000035799.5|Fgl2|ENSMUSG00000039899.5|fibrinogen-like protein 2
mm10_v2_chr7_-_37773555_37773641	0.293723	Pou5f1	ENSMUST00000176534.1|Zfp536|ENSMUSG00000043456.10|zinc finger protein 536
mm10_v2_chr4_+_3678108_3678134	0.293573	Pou5f1	ENSMUST00000041377.6|Lyn|ENSMUSG00000042228.8|Yamaguchi sarcoma viral (v-yes-1) oncogene homolog 	ENSMUST00000103010.3|Lyn|ENSMUSG00000042228.8|Yamaguchi sarcoma viral (v-yes-1) oncogene homolog
mm10_v2_chr13_-_54688184_54688211	0.290383	Pou5f1	ENSMUST00000150806.1|Rnf44|ENSMUSG00000034928.10|ring finger protein 44 	ENSMUST00000125927.1|Rnf44|ENSMUSG00000034928.10|ring finger protein 44
mm10_v2_chr19_+_46623387_46623451	0.286995	Pou5f1	ENSMUST00000111855.4|Wbp1l|ENSMUSG00000047731.11|WW domain binding protein 1 like
mm10_v2_chr13_-_117025505_117025541	0.280883	Pou5f1	ENSMUST00000022239.6|Parp8|ENSMUSG00000021725.8|poly (ADP-ribose) polymerase family, member 8
mm10_v2_chr6_+_17749170_17749265	0.266803	Pou5f1	ENSMUST00000053148.7|St7|ENSMUSG00000029534.11|suppression of tumorigenicity 7 	ENSMUST00000115417.3|St7|ENSMUSG00000029534.11|suppression of tumorigenicity 7
mm10_v2_chr14_+_66868850_66868850	0.25359	Pou5f1	ENSMUST00000100453.1|Gm5464|ENSMUSG00000075553.1|predicted gene 5464
mm10_v2_chr7_-_83550258_83550258	0.24483	Pou5f1	ENSMUST00000177929.1|Gm10610|ENSMUSG00000094841.1|predicted gene 10610
mm10_v2_chr4_-_129696817_129696843	0.239965	Pou5f1	ENSMUST00000102588.3|Tmem39b|ENSMUSG00000053730.9|transmembrane protein 39b
mm10_v2_chr5_-_74065736_74065758	0.236351	Pou5f1	ENSMUST00000145016.1|Usp46|ENSMUSG00000054814.8|ubiquitin specific peptidase 46
mm10_v2_chr12_+_100199435_100199538	0.233822	Pou5f1	ENSMUST00000110082.3|Calm1|ENSMUSG00000001175.7|calmodulin 1
mm10_v2_chr7_+_24507099_24507110	0.233094	Pou5f1	ENSMUST00000177228.1|Zfp428|ENSMUSG00000064264.8|zinc finger protein 428
mm10_v2_chr5_+_137629169_137629202	0.223873	Pou5f1	ENSMUST00000176667.1|Lrch4|ENSMUSG00000093445.1|leucine-rich repeats and calponin homology (CH) domain containing 4
mm10_v2_chrX_-_167209149_167209164	0.22156	Pou5f1	ENSMUST00000112176.1|Tmsb4x|ENSMUSG00000049775.10|thymosin, beta 4, X chromosome
mm10_v2_chr8_-_25840440_25840461	0.212999	Pou5f1	ENSMUST00000110609.1|Ash2l|ENSMUSG00000031575.11|ash2 (absent, small, or homeotic)-like (Drosophila)
mm10_v2_chr11_+_51289920_51290011	0.182429	Pou5f1	ENSMUST00000102765.2|Col23a1|ENSMUSG00000063564.7|collagen, type XXIII, alpha 1
mm10_v2_chr3_+_94974728_94974753	0.138469	Pou5f1	ENSMUST00000072287.5|Pi4kb|ENSMUSG00000038861.8|phosphatidylinositol 4-kinase, catalytic, beta polypeptide
mm10_v2_chr15_-_53346118_53346169	0.136881	Pou5f1	ENSMUST00000077273.2|Ext1|ENSMUSG00000061731.3|exostoses (multiple) 1
mm10_v2_chr9_+_104569671_104569683	0.131939	Pou5f1	ENSMUST00000057742.8|Cpne4|ENSMUSG00000032564.9|copine IV
mm10_v2_chr5_+_108065696_108065738	0.130182	Pou5f1	ENSMUST00000172045.1|Mtf2|ENSMUSG00000029267.11|metal response element binding transcription factor 2
mm10_v2_chr4_+_43632185_43632185	0.118272	Pou5f1	ENSMUST00000107874.2|Npr2|ENSMUSG00000028469.9|natriuretic peptide receptor 2
mm10_v2_chr9_+_86743641_86743654	0.113493	Pou5f1	ENSMUST00000179574.1|Prss35|ENSMUSG00000033491.7|protease, serine, 35
mm10_v2_chr13_-_23574196_23574229	0.10772	Pou5f1	ENSMUST00000105106.1|Hist1h2bf|ENSMUSG00000069268.4|histone cluster 1, H2bf
mm10_v2_chr7_+_5015466_5015509	0.0929245	Pou5f1	ENSMUST00000086349.3|Zfp524|ENSMUSG00000051184.6|zinc finger protein 524
mm10_v2_chr6_+_29361410_29361461	0.0783333	Pou5f1	ENSMUST00000156163.1|Calu|ENSMUSG00000029767.10|calumenin
mm10_v2_chr18_+_5591860_5591902	0.0629397	Pou5f1	ENSMUST00000025081.5|Zeb1|ENSMUSG00000024238.7|zinc finger E-box binding homeobox 1 	ENSMUST00000159390.1|Zeb1|ENSMUSG00000024238.7|zinc finger E-box binding homeobox 1
mm10_v2_chr17_-_24533709_24533732	0.0401958	Pou5f1	ENSMUST00000061764.7|Rab26|ENSMUSG00000079657.4|RAB26, member RAS oncogene family
mm10_v2_chrX_+_7878298_7878314	0.0299553	Pou5f1	ENSMUST00000033495.8|Pim2|ENSMUSG00000031155.8|proviral integration site 2
mm10_v2_chr4_-_129696579_129696620	0.0284929	Pou5f1	ENSMUST00000137640.1|Tmem39b|ENSMUSG00000053730.9|transmembrane protein 39b
mm10_v2_chr13_-_23683941_23683967	0.021496	Pou5f1	ENSMUST00000171127.1|Hist1h2ac|ENSMUSG00000069270.4|histone cluster 1, H2ac
mm10_v2_chr11_+_108920800_108920841	0.0208327	Pou5f1	ENSMUST00000140821.1|Axin2|ENSMUSG00000000142.9|axin2
mm10_v2_chr3_-_66296807_66296837	0.0194051	Pou5f1	ENSMUST00000029419.7|Veph1|ENSMUSG00000027831.9|ventricular zone expressed PH domain-containing 1
mm10_v2_chr3_-_87263518_87263599	0.0148715	Pou5f1	ENSMUST00000090986.4|Fcrls|ENSMUSG00000015852.7|Fc receptor-like S, scavenger receptor
